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Conserved domains on  [gi|109452606|ref|NP_001035892|]
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UPF0728 protein C10orf53 isoform b [Homo sapiens]

Protein Classification

UPF0728 family protein( domain architecture ID 10633421)

UPF0728 family protein similar to Homo sapiens protein C10orf53

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UPF0728 pfam15092
Uncharacterized protein family UPF0728; This family of proteins is functionally ...
 1-89 1.30e-52

Uncharacterized protein family UPF0728; This family of proteins is functionally uncharacterized. This family of proteins is found in metazoa. There is a conserved GPY sequence motif.


:

Pssm-ID: 405733  Cd Length: 88  Bit Score: 159.00  E-value: 1.30e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109452606   1 MPKNAVVILRYGPYSAAGLpVEHHTFRLQGLQAVLAIDGHEVILEKIEDWNVVELMVNEEVIFHCNIKDLEFGGDGKLDP 80
Cdd:pfam15092  1 MPKNAKVTIRYGPYEACGV-VEHRTQRLEGLQAVLQKDGHEVELEKTEDWNVVELVVNGETVFRCNITDLSFGGDGKLDP 79


                 ....*....
gi 109452606  81 LCEKARIAV 89
Cdd:pfam15092 80 LCQEARKAV 88
 
Name Accession Description Interval E-value
UPF0728 pfam15092
Uncharacterized protein family UPF0728; This family of proteins is functionally ...
 1-89 1.30e-52

Uncharacterized protein family UPF0728; This family of proteins is functionally uncharacterized. This family of proteins is found in metazoa. There is a conserved GPY sequence motif.


Pssm-ID: 405733  Cd Length: 88  Bit Score: 159.00  E-value: 1.30e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109452606   1 MPKNAVVILRYGPYSAAGLpVEHHTFRLQGLQAVLAIDGHEVILEKIEDWNVVELMVNEEVIFHCNIKDLEFGGDGKLDP 80
Cdd:pfam15092  1 MPKNAKVTIRYGPYEACGV-VEHRTQRLEGLQAVLQKDGHEVELEKTEDWNVVELVVNGETVFRCNITDLSFGGDGKLDP 79


                 ....*....
gi 109452606  81 LCEKARIAV 89
Cdd:pfam15092 80 LCQEARKAV 88
 
Name Accession Description Interval E-value
UPF0728 pfam15092
Uncharacterized protein family UPF0728; This family of proteins is functionally ...
 1-89 1.30e-52

Uncharacterized protein family UPF0728; This family of proteins is functionally uncharacterized. This family of proteins is found in metazoa. There is a conserved GPY sequence motif.


Pssm-ID: 405733  Cd Length: 88  Bit Score: 159.00  E-value: 1.30e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109452606   1 MPKNAVVILRYGPYSAAGLpVEHHTFRLQGLQAVLAIDGHEVILEKIEDWNVVELMVNEEVIFHCNIKDLEFGGDGKLDP 80
Cdd:pfam15092  1 MPKNAKVTIRYGPYEACGV-VEHRTQRLEGLQAVLQKDGHEVELEKTEDWNVVELVVNGETVFRCNITDLSFGGDGKLDP 79


                 ....*....
gi 109452606  81 LCEKARIAV 89
Cdd:pfam15092 80 LCQEARKAV 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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