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Conserved domains on  [gi|1907002543|ref|NP_001094062|]
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V-type proton ATPase subunit e 2 isoform 2 [Homo sapiens]

Protein Classification

V-type proton ATPase subunit e( domain architecture ID 10527487)

V-type proton ATPase subunit e is an an essential component of vacuolar ATPase that is responsible for acidifying a variety of intracellular compartments in eukaryotic cells

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_H pfam05493
ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 ...
 9-51 2.66e-15

ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 kDa. This subunit may be required for assembly of vacuolar ATPase.


:

Pssm-ID: 461663  Cd Length: 59  Bit Score: 66.02  E-value: 2.66e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1907002543   9 PVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLL 51
Cdd:pfam05493   1 PILIGTIIWAAVGIVGPFFAPKGPNRGLIRTSLILTAVCCWLM 43
 
Name Accession Description Interval E-value
ATP_synt_H pfam05493
ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 ...
 9-51 2.66e-15

ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 kDa. This subunit may be required for assembly of vacuolar ATPase.


Pssm-ID: 461663  Cd Length: 59  Bit Score: 66.02  E-value: 2.66e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1907002543   9 PVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLL 51
Cdd:pfam05493   1 PILIGTIIWAAVGIVGPFFAPKGPNRGLIRTSLILTAVCCWLM 43
 
Name Accession Description Interval E-value
ATP_synt_H pfam05493
ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 ...
 9-51 2.66e-15

ATP synthase subunit H; ATP synthase subunit H is an extremely hydrophobic of approximately 9 kDa. This subunit may be required for assembly of vacuolar ATPase.


Pssm-ID: 461663  Cd Length: 59  Bit Score: 66.02  E-value: 2.66e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1907002543   9 PVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLL 51
Cdd:pfam05493   1 PILIGTIIWAAVGIVGPFFAPKGPNRGLIRTSLILTAVCCWLM 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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