|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
628-1299 |
4.31e-26 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 117.08 E-value: 4.31e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 628 EDLQRRLEEFEGERERLQRMADSAAS----LEQQLEQVKLTLLQRDQQLEALQQEHL-------DLMKQLTLTQEALQSR 696
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAelqeLEEKLEELRLEVSELEEEIEELQKELYalaneisRLEQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 697 EQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREE 776
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQ 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 777 LAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDqlISELKATRKRLDSELKELRQELMQVHGEKRT 856
Cdd:TIGR02168 395 IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 857 AEAELSRLHREVAQVRQHMADLEGHLQSAQ----------KERDEMETHL----QSLQFDKEQMVAVTEA-NEALKKQIE 921
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENLEgfsegvkallKNQSGLSGILgvlsELISVDEGYEAAIEAAlGGRLQAVVV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 922 ELQQEARKAITEQKQKM----------RRLGSDLTSAQKEMKTKHkayENAVGILSRRLQEALAAKEAADAELGQLR--- 988
Cdd:TIGR02168 553 ENLNAAKKAIAFLKQNElgrvtflpldSIKGTEIQGNDREILKNI---EGFLGVAKDLVKFDPKLRKALSYLLGGVLvvd 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 989 --AQGGSSDSSLALHERI----------------QALEAELQAVSHSKTLLE-----KELQEVIALTSQELEESREKVLE 1045
Cdd:TIGR02168 630 dlDNALELAKKLRPGYRIvtldgdlvrpggvitgGSAKTNSSILERRREIEEleekiEELEEKIAELEKALAELRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1046 LEDEL-----------QESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNL 1114
Cdd:TIGR02168 710 LEEELeqlrkeleelsRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1115 QVQAVLQRKEEEDRQmkhlVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQ 1194
Cdd:TIGR02168 790 QIEQLKEELKALREA----LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELE 865
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1195 AEADDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLD-LTEQ- 1272
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDnLQERl 945
|
730 740
....*....|....*....|....*....
gi 1955007402 1273 --QGRKELEGLQQLLQNVKSELEMAQEDL 1299
Cdd:TIGR02168 946 seEYSLTLEEAEALENKIEDDEEEARRRL 974
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
606-1157 |
3.75e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 103.86 E-value: 3.75e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 606 EADMLDQEAAFMQIQEAKTMVEEdLQRRLEEFEGERERLQRmadSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQ 685
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEE-LEAELEELEAELEELEA---ELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 686 LTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEE 765
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 766 TSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQ 845
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 846 ELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQF---------------------DKE 904
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAalllaglrglagavavligveAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 905 QMVAVTEANEALKKQIEELQQEARKAITEQKQKmrrlgsDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAEL 984
Cdd:COG1196 537 EAALEAALAAALQNIVVEDDEVAAAAIEYLKAA------KAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 985 GQLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRgfrkkIKRLE 1064
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE-----LEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1065 ESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKE 1144
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
570
....*....|...
gi 1955007402 1145 KEKVNSLKEQVAA 1157
Cdd:COG1196 766 ERELERLEREIEA 778
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
593-1300 |
3.14e-21 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 101.30 E-value: 3.14e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 593 KEKGRIAAQLQGIEADMLDQEAAFMQI-QEAKTMVEED---LQRRLEEFEGERERLQRmadSAASLEQQLEQVKLTLLQR 668
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGEEEqlrVKEKIGELEAEIASLER---SIAEKERELEDAEERLAKL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 669 DQQLEALQQEHLDLmkqltltQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSG 748
Cdd:TIGR02169 328 EAEIDKLLAEIEEL-------EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 749 KEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDatskdqlISE 828
Cdd:TIGR02169 401 INELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE-------LYD 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 829 LKATRKRLDSELKELRQELMQVHGEKRTAEaelSRLHREVAQVRQHMADLEG-HLQSAQ--KERDEMETHLQSLQFDKEQ 905
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASE---ERVRGGRAVEEVLKASIQGvHGTVAQlgSVGERYATAIEVAAGNRLN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 906 MVaVTEANEALKKQIEELQQE-ARKAITEQKQKMRRLGSDLTSAQKE--------MKTKHKAYENAV------GILSRRL 970
Cdd:TIGR02169 551 NV-VVEDDAVAKEAIELLKRRkAGRATFLPLNKMRDERRDLSILSEDgvigfavdLVEFDPKYEPAFkyvfgdTLVVEDI 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 971 QEALAAKEAAD--AELGQLRAQGGS----SDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTSQELEESREKVL 1044
Cdd:TIGR02169 630 EAARRLMGKYRmvTLEGELFEKSGAmtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1045 ELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVlqrke 1124
Cdd:TIGR02169 710 ELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL----- 784
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1125 eEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAakVEAGHNRRHFKAASLElsEVKKELQAKEHLVQ----KLQAEADDL 1200
Cdd:TIGR02169 785 -EARLSHSRIPEIQAELSKLEEEVSRIEARLRE--IEQKLNRLTLEKEYLE--KEIQELQEQRIDLKeqikSIEKEIENL 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1201 QIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQgrkeleg 1280
Cdd:TIGR02169 860 NGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE------- 932
|
730 740
....*....|....*....|
gi 1955007402 1281 LQQLLQNVKSELEMAQEDLS 1300
Cdd:TIGR02169 933 LSEIEDPKGEDEEIPEEELS 952
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
631-1303 |
4.11e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.90 E-value: 4.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 631 QRRLEEfegERERLQRMADSAASLEQQLE----QVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTH 706
Cdd:TIGR02168 178 ERKLER---TRENLDRLEDILNELERQLKslerQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 707 YDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEH 786
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 787 LQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHR 866
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 867 EVAQVRQHMADLEGHLQSAQKERDEMEthLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLT 946
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 947 SAQKEMKTKHKAYENAVGILSRRLQEALAAkeaadaelgQLRAQGGSSDS------SLALHERIQAL-----EAELQAVS 1015
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSGLSGIL---------GVLSELISVDEgyeaaiEAALGGRLQAVvvenlNAAKKAIA 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1016 HsktLLEKELQEV--IALTSQELEESREKVLELedeLQESRGFRKKIKRLEESNKKL-------------------ALEL 1074
Cdd:TIGR02168 564 F---LKQNELGRVtfLPLDSIKGTEIQGNDREI---LKNIEGFLGVAKDLVKFDPKLrkalsyllggvlvvddldnALEL 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1075 EHE----------KGKLTGLG--QSNAALREHNSILETA-----LAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQAL 1137
Cdd:TIGR02168 638 AKKlrpgyrivtlDGDLVRPGgvITGGSAKTNSSILERRreieeLEEKIEELEEKIAELEKALAELRKELEELEEELEQL 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1138 QASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAE 1217
Cdd:TIGR02168 718 RKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1218 LAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQG---RKELEGLQQLLQNVKSELEM 1294
Cdd:TIGR02168 798 LKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIeslAAEIEELEELIEELESELEA 877
|
....*....
gi 1955007402 1295 AQEDLSMTQ 1303
Cdd:TIGR02168 878 LLNERASLE 886
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
377-942 |
5.48e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.01 E-value: 5.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 377 LEGQLEALSLEASQALK------EKAELQAQLAALSTKLQaqvecshssQQRQDSLSSEVDTLKQSCWDLERAMTDLQNM 450
Cdd:COG1196 198 LERQLEPLERQAEKAERyrelkeELKELEAELLLLKLREL---------EAELEELEAELEELEAELEELEAELAELEAE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 451 LEAKNASLASSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISS 530
Cdd:COG1196 269 LEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 531 LQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHL---KLENVSLSQQLTETQHRSMKEKGRIAAQLQGIEA 607
Cdd:COG1196 349 AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAlraAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 608 DMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLT 687
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 688 LTQEALQSREQSLDALQTH-------------YDELQARLGELQGEAASREDTICLLQNEK-----------IILEAALQ 743
Cdd:COG1196 509 GVKAALLLAGLRGLAGAVAvligveaayeaalEAALAAALQNIVVEDDEVAAAAIEYLKAAkagratflpldKIRARAAL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 744 AAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKD 823
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 824 QLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEghlQSAQKERDEMETHLQSLQFDK 903
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEE---ALEEQLEAEREELLEELLEEE 745
|
570 580 590
....*....|....*....|....*....|....*....
gi 1955007402 904 EQMVAVTEANEALKKQIEELQQEARKAiteqKQKMRRLG 942
Cdd:COG1196 746 ELLEEEALEELPEPPDLEELERELERL----EREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
631-1223 |
1.59e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.86 E-value: 1.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 631 QRRLEEfegERERLQRMADSAASLEQQLEQVKLtllQRDQQLEALQQehldlmkqltltQEALQSREQSLDALqtHYDEL 710
Cdd:COG1196 178 ERKLEA---TEENLERLEDILGELERQLEPLER---QAEKAERYREL------------KEELKELEAELLLL--KLREL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 711 QARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQE 790
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 791 TAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQ 870
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 871 VRQHMADLEGHLQSAQKERDEMETHLQSLQfdkEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQK 950
Cdd:COG1196 398 LAAQLEELEEAEEALLERLERLEEELEELE---EALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 951 EMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQG--GSSDSSLALHERIQ-------ALEAELQAVS-HSKTL 1020
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLlaGLRGLAGAVAVLIGveaayeaALEAALAAALqNIVVE 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1021 LEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILET 1100
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1101 A---LAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQAL---QASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASL 1174
Cdd:COG1196 635 AlrrAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALleaEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 1955007402 1175 ELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARA 1223
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE 763
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
361-1149 |
1.96e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.12 E-value: 1.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 361 AETQEEMLQV---LKEkmrLEGQLEALSLEASQALKEKaELQAQLAALSTKLQAQVecSHSSQQRQDSLSSEVDTLKQSC 437
Cdd:TIGR02168 182 ERTRENLDRLediLNE---LERQLKSLERQAEKAERYK-ELKAELRELELALLVLR--LEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 438 WDLERAMTDLQNMLEAKNASLASSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTL 517
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 518 TSKLKASQAEISSLQSVRQWYQQQL----ALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLEN---VSLSQQLTETQHR 590
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELeeleAELEELESRLEELEEQLETLRSKVAQLELQIASLNneiERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 591 SMKEKGRIAAQLQGI-EADMLDQEAAFMQIQEAKTMVE---EDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLL 666
Cdd:TIGR02168 416 RERLQQEIEELLKKLeEAELKELQAELEELEEELEELQeelERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 667 QRDQQLEALQQEHLDLMKQ-------LTLTQEALQSREQ-----------SLDALQTHYDELQARLGELQGEAASREDTI 728
Cdd:TIGR02168 496 RLQENLEGFSEGVKALLKNqsglsgiLGVLSELISVDEGyeaaieaalggRLQAVVVENLNAAKKAIAFLKQNELGRVTF 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 729 CLLqneKIILEAALQAAKSGKEELDRGARRLEEGTEETSET------------------------LEKLREELAI----- 779
Cdd:TIGR02168 576 LPL---DSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKlrkalsyllggvlvvddldnalelAKKLRPGYRIvtldg 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 780 ---------------KSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELR 844
Cdd:TIGR02168 653 dlvrpggvitggsakTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALR 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 845 QELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQfdkEQMVAVTEANEALKKQIEELQ 924
Cdd:TIGR02168 733 KDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE---AQIEQLKEELKALREALDELR 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 925 QEarkaITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRaqggssdsslALHERI 1004
Cdd:TIGR02168 810 AE----LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIE----------ELESEL 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1005 QALEAELQAVSHSKTLLEKELQEVialtSQELEESREKVLELEDELQESrgfRKKIKRLEESNKKLALELEHEKGKLTGL 1084
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEEL----SEELRELESKRSELRRELEEL---REKLAQLELRLEGLEVRIDNLQERLSEE 948
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1085 GQSNA-ALREHNSILETALAKREADLVQLNLQV--------------QAVLQRKEEEDRQMKHLVQALqASLEKEKEKVN 1149
Cdd:TIGR02168 949 YSLTLeEAEALENKIEDDEEEARRRLKRLENKIkelgpvnlaaieeyEELKERYDFLTAQKEDLTEAK-ETLEEAIEEID 1027
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
773-1408 |
4.42e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 90.77 E-value: 4.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 773 LREELAiksGQVEHLQQEtAALKKQMQKIKEQFLQQKVMVEAYRRDatskdqlisELKATRKRLDSELKELRQELMQVHG 852
Cdd:COG1196 194 ILGELE---RQLEPLERQ-AEKAERYRELKEELKELEAELLLLKLR---------ELEAELEELEAELEELEAELEELEA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 853 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMEthlQSLQFDKEQMVAVTEANEALKKQIEELQQEarkaIT 932
Cdd:COG1196 261 ELAELEAELEELRLELEELELELEEAQAEEYELLAELARLE---QDIARLEERRRELEERLEELEEELAELEEE----LE 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 933 EQKQKMRRLGSDLTSAQKEMKTKHKAYENAvgiLSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQ 1012
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEA---EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1013 AvshSKTLLEKELQEVIALTSQELEESREKVLELEDELQEsrgfRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALR 1092
Cdd:COG1196 411 A---LLERLERLEEELEELEEALAELEEEEEEEEEALEEA----AEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1093 EHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVnslkEQVAAAKVEAGHNRRHFKAA 1172
Cdd:COG1196 484 EELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAA----LEAALAAALQNIVVEDDEVA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1173 SLELSEVKKELQAK------EHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEM 1246
Cdd:COG1196 560 AAAIEYLKAAKAGRatflplDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1247 ENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNMKTLLQQ 1326
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1327 NQQLKLDLRRGAAKTRKEPkgeasssnpatpikipdcpvpASLLEELLRPPPAVSKEPLKNLNscLQQLKQEMDSLQRQM 1406
Cdd:COG1196 720 ELEEEALEEQLEAEREELL---------------------EELLEEEELLEEEALEELPEPPD--LEELERELERLEREI 776
|
..
gi 1955007402 1407 EE 1408
Cdd:COG1196 777 EA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
325-930 |
1.41e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 1.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 325 LQAAAAEHQDQGQEVNGEVRSRRDSIcssVSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAA 404
Cdd:COG1196 251 LEAELEELEAELAELEAELEELRLEL---EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 405 LSTKLQAQvecshssQQRQDSLSSEVDTLKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQVAEEQYQRLMAKVEDMQR 484
Cdd:COG1196 328 LEEELEEL-------EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 485 SMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQM 564
Cdd:COG1196 401 QLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 565 TQAGLLEHLKLENVSLSQQLTETQHRSMKEKGRIAAQLQGIEADMLDQEAAfmqiqeaktmVEEDLQRRLEEFEGEReRL 644
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIG----------VEAAYEAALEAALAAA-LQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 645 QRMADSAASLEQQLEQVKLTLLQRDQQLEalqqehLDLMKQLTLTQEALQSREQSLDALQTHYD--ELQARLGELQGEAA 722
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLP------LDKIRARAALAAALARGAIGAAVDLVASDlrEADARYYVLGDTLL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 723 SREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIK 802
Cdd:COG1196 624 GRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 803 EQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHL 882
Cdd:COG1196 704 EEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVN 783
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1955007402 883 QSAQKERDEMETHLQSLqfdKEQMVAVTEANEALKKQIEELQQEARKA 930
Cdd:COG1196 784 LLAIEEYEELEERYDFL---SEQREDLEEARETLEEAIEEIDRETRER 828
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
355-941 |
4.38e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 4.38e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 355 SLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQ-------DSLS 427
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLeelkeelESLE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 428 SEVDTLKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQ-----QMTA 502
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKkleeaELKE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 503 LQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLK-------- 574
Cdd:TIGR02168 438 LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKallknqsg 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 575 ---------------------LENV-----------SLSQQLTETQHRSMKEKGRIA---------AQLQGIEADMLDQE 613
Cdd:TIGR02168 518 lsgilgvlselisvdegyeaaIEAAlggrlqavvveNLNAAKKAIAFLKQNELGRVTflpldsikgTEIQGNDREILKNI 597
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 614 AAFMQIQEAKTMVEEDLQRRLEEFEG------------ERERLQRMADSAASLEQQL-----------EQVKLTLLQRDQ 670
Cdd:TIGR02168 598 EGFLGVAKDLVKFDPKLRKALSYLLGgvlvvddldnalELAKKLRPGYRIVTLDGDLvrpggvitggsAKTNSSILERRR 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 671 QLEalqqehlDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKE 750
Cdd:TIGR02168 678 EIE-------ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 751 ELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFlqqkvmvEAYRRDATSKDQLISELK 830
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL-------DELRAELTLLNEEAANLR 823
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 831 ATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVT 910
Cdd:TIGR02168 824 ERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
650 660 670
....*....|....*....|....*....|.
gi 1955007402 911 EANEALKKQIEELQQEARKAITEQKQKMRRL 941
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLELRLEGL 934
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
305-942 |
5.46e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 5.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 305 VNGQEIPADTLGQFPSIKDVLQAAAAEHQDQGQEVNGEVRSRRDSICSSVS----LESSAAETQEEMLQVLKEKMRLEGQ 380
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAeleeLESRLEELEEQLETLRSKVAQLELQ 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 381 LEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQrqDSLSSEVDTLKQSCWDLERAMTDLQNMLEAKNASLAS 460
Cdd:TIGR02168 395 IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELERLEEALEELREELEE 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 461 SNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALqsqlqqvqlerttltSKLKASQAEISSLQSVRQWYQQ 540
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ---------------SGLSGILGVLSELISVDEGYEA 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 541 QLALAqearvrLQGEMAHIQVGQMTQAGL-LEHLK---------LENVSLSQQLTETQHRSMKEKGR-----------IA 599
Cdd:TIGR02168 538 AIEAA------LGGRLQAVVVENLNAAKKaIAFLKqnelgrvtfLPLDSIKGTEIQGNDREILKNIEgflgvakdlvkFD 611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 600 AQLQGIEADMLDQEAAFMQIQEAKTM-VEEDLQRRLEEFEGER-------------------ERLQRMADsaasLEQQLE 659
Cdd:TIGR02168 612 PKLRKALSYLLGGVLVVDDLDNALELaKKLRPGYRIVTLDGDLvrpggvitggsaktnssilERRREIEE----LEEKIE 687
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 660 QVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILE 739
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE 767
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 740 AALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVE--AYRR 817
Cdd:TIGR02168 768 ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEdlEEQI 847
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 818 DATSKDQL-----ISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEM 892
Cdd:TIGR02168 848 EELSEDIEslaaeIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 893 ETHLQSLQFD--------KEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLG 942
Cdd:TIGR02168 928 ELRLEGLEVRidnlqerlSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELG 985
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
362-1203 |
1.62e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.87 E-value: 1.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 362 ETQEEMLQVLKEKMRLEGQLEALSLEAsqALKEKAELQAQLAALS---TKLQAQVecshssQQRQDSLSSEVDTLKQSCW 438
Cdd:TIGR02169 208 EKAERYQALLKEKREYEGYELLKEKEA--LERQKEAIERQLASLEeelEKLTEEI------SELEKRLEEIEQLLEELNK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 439 DLERAMTDLQNMLEAKNASLASSNNDLQVAEEQYQRLMakvEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLT 518
Cdd:TIGR02169 280 KIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKEREL---EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 519 SKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEmahiqvgqmtqaglLEHLKLENVSLSQqlteTQHRSMKEKGRI 598
Cdd:TIGR02169 357 EEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK--------------LEKLKREINELKR----ELDRLQEELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 599 AAQLQGIEADMLDQEAAFMQIQEAKtmveEDLQRRLEEFEGERERLQRMADSAaslEQQLEQVKLTLLQRDQQLEALQQE 678
Cdd:TIGR02169 419 SEELADLNAAIAGIEAKINELEEEK----EDKALEIKKQEWKLEQLAADLSKY---EQELYDLKEEYDRVEKELSKLQRE 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 679 hldlMKQLTLTQEALQSREQSLDALQTHYDE-------LQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEE 751
Cdd:TIGR02169 492 ----LAEAEAQARASEERVRGGRAVEEVLKAsiqgvhgTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELL 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 752 LDRGARRLEEGTEETSETLEKLREELAiKSGQVEHLqQETAALKKQMQKIKEQFLQQKVMV---EAYRR----------- 817
Cdd:TIGR02169 568 KRRKAGRATFLPLNKMRDERRDLSILS-EDGVIGFA-VDLVEFDPKYEPAFKYVFGDTLVVediEAARRlmgkyrmvtle 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 818 -DATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHL 896
Cdd:TIGR02169 646 gELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEI 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 897 QSLQFDKEQmvaVTEANEALKKQIEELQQEarkaITEQKQKMRRLGSDLtsaqKEMKTKHKAYENAVGILSRRLqealaA 976
Cdd:TIGR02169 726 EQLEQEEEK---LKERLEELEEDLSSLEQE----IENVKSELKELEARI----EELEEDLHKLEEALNDLEARL-----S 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 977 KEAADAELGQLRAQggsSDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIaltsQELEESREKVLELEDELQESRGF 1056
Cdd:TIGR02169 790 HSRIPEIQAELSKL---EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQ----EQRIDLKEQIKSIEKEIENLNGK 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1057 RKKIKRLEESNKKLALELEHEKGKLTG----LGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKH 1132
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESRLGDLKKerdeLEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE 942
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 1133 LVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRrhfkaASLELSEVKKELQAKEHLVQKLQAEADDLQIR 1203
Cdd:TIGR02169 943 DEEIPEEELSLEDVQAELQRVEEEIRALEPVNML-----AIQEYEEVLKRLDELKEKRAKLEEERKAILER 1008
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
609-1222 |
2.01e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 72.26 E-value: 2.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 609 MLDQEAAFMQIQEAKTMVEE--DLQRRLEEFEGERERLQRMADSAASLEQQLEQV-KLTLLQRDQQLEALQQEHLDLMKQ 685
Cdd:COG4913 217 MLEEPDTFEAADALVEHFDDleRAHEALEDAREQIELLEPIRELAERYAAARERLaELEYLRAALRLWFAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 686 LTLTQEALQSREQSLDALQTHYDELQARLGELQGEaasredticllqnekiILEAALQAAKSGKEELDRgarrleegtee 765
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQ----------------IRGNGGDRLEQLEREIER----------- 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 766 tsetlekLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKvmveayrrdatskdqliSELKATRKRLDSELKELRQ 845
Cdd:COG4913 350 -------LERELEERERRRARLEALLAALGLPLPASAEEFAALR-----------------AEAAALLEALEEELEALEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 846 ELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAqkeRDEMETHLQ----SLQFDKEqMVAVTEANEALKKQIE 921
Cdd:COG4913 406 ALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL---RDALAEALGldeaELPFVGE-LIEVRPEEERWRGAIE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 922 --------------ELQQEARKAITEQKQKMR----RLGSDLTSAQK----------EMKTK-HKAYENAVGILSRRL-- 970
Cdd:COG4913 482 rvlggfaltllvppEHYAAALRWVNRLHLRGRlvyeRVRTGLPDPERprldpdslagKLDFKpHPFRAWLEAELGRRFdy 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 971 --------------------QEALAAKEAADAELGQLRAQ---GGSSDSSLA-LHERIQALEAELQAVSHSKTLLEKELQ 1026
Cdd:COG4913 562 vcvdspeelrrhpraitragQVKGNGTRHEKDDRRRIRSRyvlGFDNRAKLAaLEAELAELEEELAEAEERLEALEAELD 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1027 EVIAL-----TSQELEESREKVLELEDELQEsrgFRKKIKRLEESN---KKLALELEHEKGKLTGLGQSNAALREHNSIL 1098
Cdd:COG4913 642 ALQERrealqRLAEYSWDEIDVASAEREIAE---LEAELERLDASSddlAALEEQLEELEAELEELEEELDELKGEIGRL 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1099 ETALAKREADLVQLNLQVQAVLQRKEEE--------------DRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAgh 1164
Cdd:COG4913 719 EKELEQAEEELDELQDRLEAAEDLARLElralleerfaaalgDAVERELRENLEERIDALRARLNRAEEELERAMRAF-- 796
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1955007402 1165 nRRHFKAASLELSEvkkELQAKEHLVQKLQA-EADDL-----QIREGKHS---QEIAQFQAELAEAR 1222
Cdd:COG4913 797 -NREWPAETADLDA---DLESLPEYLALLDRlEEDGLpeyeeRFKELLNEnsiEFVADLLSKLRRAI 859
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
802-1319 |
4.97e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.86 E-value: 4.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 802 KEQFLQQKVMVEayRRDATSKDQLISELKATRKrLDSELKELRQELMQVHGEKRTAEA---ELSRLHREVAQVRQHMADL 878
Cdd:PRK03918 181 LEKFIKRTENIE--ELIKEKEKELEEVLREINE-ISSELPELREELEKLEKEVKELEElkeEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 879 EGHLQSAQKERDEMETHLQSLqfdkEQMVAVTEANEALKKQIEELQQEARKaITEQKQKMRRLGSDLTSAQKEMKTKHKA 958
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEEL----EEKVKELKELKEKAEEYIKLSEFYEE-YLDELREIEKRLSRLEEEINGIEERIKE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 959 YENavgiLSRRLQEALAAKEAADAELGQLRaqggssdSSLALHERIQALEAELQavSHSKTLLEKELQEVIAltsqELEE 1038
Cdd:PRK03918 333 LEE----KEERLEELKKKLKELEKRLEELE-------ERHELYEEAKAKKEELE--RLKKRLTGLTPEKLEK----ELEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1039 SREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGqsnAALREHNSilETALAKREADLVQlnlqVQA 1118
Cdd:PRK03918 396 LEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG---RELTEEHR--KELLEEYTAELKR----IEK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1119 VLQRKEEEDRQMKHLVQALQASLEKEKE--KVNSLKEQVAAAKVE-AGHNRRHFKAASLELSEVKKELQAKEHLVQKLQA 1195
Cdd:PRK03918 467 ELKEIEEKERKLRKELRELEKVLKKESEliKLKELAEQLKELEEKlKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKK 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1196 EADDLQIREGKhSQEIAQFQAELAEARAQLqllqkqldeqlskqpvgNQEMENLKWE-VDQKEREIQSLKQQLD--LTEQ 1272
Cdd:PRK03918 547 ELEKLEELKKK-LAELEKKLDELEEELAEL-----------------LKELEELGFEsVEELEERLKELEPFYNeyLELK 608
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1955007402 1273 QGRKELEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNN 1319
Cdd:PRK03918 609 DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKK 655
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
627-1162 |
7.86e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.09 E-value: 7.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 627 EEDLQRRLEEFEGERERLQRMADSAASLEQQL-------EQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQS 699
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPELreeleklEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 700 LDALQTHYDELQ---ARLGELQGEA-------ASREDTICLLQNEKIILEAALQAAKSGKEELDRgARRLEEGTEETSET 769
Cdd:PRK03918 268 IEELKKEIEELEekvKELKELKEKAeeyiklsEFYEEYLDELREIEKRLSRLEEEINGIEERIKE-LEEKEERLEELKKK 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 770 LEKLREELAIKSGQVEhLQQETAALKKQMQKIKEQFLQQKV-----MVEAYRRDATSKDQLISELKATRKRLDSELKELR 844
Cdd:PRK03918 347 LKELEKRLEELEERHE-LYEEAKAKKEELERLKKRLTGLTPeklekELEELEKAKEEIEEEISKITARIGELKKEIKELK 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 845 QELMQVHGEKRTA-----------EAEL-SRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQS---LQFDKEQMVAV 909
Cdd:PRK03918 426 KAIEELKKAKGKCpvcgrelteehRKELlEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKeseLIKLKELAEQL 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 910 TEANEALKK-QIEELQQEARKAiTEQKQKMRRLGSDLTSAQKEMKtKHKAYENAVGILSRRLQealAAKEAADAELGQLR 988
Cdd:PRK03918 506 KELEEKLKKyNLEELEKKAEEY-EKLKEKLIKLKGEIKSLKKELE-KLEELKKKLAELEKKLD---ELEEELAELLKELE 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 989 AQGGSSDSSlaLHERIQALEA---ELQAVSHSKTLLEKELQEvIALTSQELEESREKVLELEDELQESRgfrkkiKRLEE 1065
Cdd:PRK03918 581 ELGFESVEE--LEERLKELEPfynEYLELKDAEKELEREEKE-LKKLEEELDKAFEELAETEKRLEELR------KELEE 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1066 SNKKLALElEHEKgkltglgqsnaaLREHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQ--ASLEK 1143
Cdd:PRK03918 652 LEKKYSEE-EYEE------------LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKelEKLEK 718
|
570
....*....|....*....
gi 1955007402 1144 EKEKVNSLKEQVAAAKVEA 1162
Cdd:PRK03918 719 ALERVEELREKVKKYKALL 737
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
590-1293 |
1.10e-11 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 70.00 E-value: 1.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 590 RSMKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVE-EDLQRRLEEFEGErERLQRMADSAASLEQQLEQVKLTLLQR 668
Cdd:TIGR00618 160 AKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAElLTLRSQLLTLCTP-CMPDTYHERKQVLEKELKHLREALQQT 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 669 DQQLEALQQEHLdlmkqltlTQEALQSREQSLDALQTHYDELQ---ARLGELQGEAASREDTICLLQNEKIILEAALQAA 745
Cdd:TIGR00618 239 QQSHAYLTQKRE--------AQEEQLKKQQLLKQLRARIEELRaqeAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 746 KSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQK-IKEQFLQQKVMVEAYRRDATSKDQ 824
Cdd:TIGR00618 311 RIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATsIREISCQQHTLTQHIHTLQQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 825 LISELKATRKRLDSELKE-------------LRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDE 891
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREqatidtrtsafrdLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 892 METHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLG--SDLTSAQKEMKTKHKAYENAVGILSRR 969
Cdd:TIGR00618 471 REQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDnpGPLTRRMQRGEQTYAQLETSEEDVYHQ 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 970 LQEALAAKEAADAELGQLRaqggssDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDE 1049
Cdd:TIGR00618 551 LTSERKQRASLKEQMQEIQ------QSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPE 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1050 LQESRgfrkKIKRLEESNKKLALELEHEKGKLTGLGQSNaalrehnsILETALAKREADLvQLNLQVQAVLQRKEEEDRQ 1129
Cdd:TIGR00618 625 QDLQD----VRLHLQQCSQELALKLTALHALQLTLTQER--------VREHALSIRVLPK-ELLASRQLALQKMQSEKEQ 691
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1130 MKHLVQALQASLEKEKEKVNSLKEqvaaakveaghNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHsQ 1209
Cdd:TIGR00618 692 LTYWKEMLAQCQTLLRELETHIEE-----------YDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKA-R 759
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1210 EIAQFQAELAEARAQLQllqkqldeqlskqpvgNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKEL----------- 1278
Cdd:TIGR00618 760 TEAHFNNNEEVTAALQT----------------GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIpsdedilnlqc 823
|
730
....*....|....*
gi 1955007402 1279 EGLQQLLQNVKSELE 1293
Cdd:TIGR00618 824 ETLVQEEEQFLSRLE 838
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
793-1322 |
1.30e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 1.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 793 ALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVR 872
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 873 QHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEM 952
Cdd:TIGR02168 316 RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 953 KTkhkayenavgiLSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHER--IQALEAELQAVSHSKTLLEKELQEVIA 1030
Cdd:TIGR02168 396 AS-----------LNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELkeLQAELEELEEELEELQEELERLEEALE 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1031 LTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKL---ALELEHEKGKLTGLGQSNAALREHNSILETALAkrea 1107
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFsegVKALLKNQSGLSGILGVLSELISVDEGYEAAIE---- 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1108 dlVQLNLQVQAVLQRKEEEDRQmkhlvqALQASLEKEKEKVNSLKE------QVAAAKVEAGHNRRHFKAASLELSEVKK 1181
Cdd:TIGR02168 541 --AALGGRLQAVVVENLNAAKK------AIAFLKQNELGRVTFLPLdsikgtEIQGNDREILKNIEGFLGVAKDLVKFDP 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1182 ELQ-------AKEHLVQKLQaEADDLQIREGKH-------------------------------SQEIAQFQAELAEARA 1223
Cdd:TIGR02168 613 KLRkalsyllGGVLVVDDLD-NALELAKKLRPGyrivtldgdlvrpggvitggsaktnssilerRREIEELEEKIEELEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1224 QLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVK----------SELE 1293
Cdd:TIGR02168 692 KIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTeleaeieeleERLE 771
|
570 580
....*....|....*....|....*....
gi 1955007402 1294 MAQEDLSMTQKDKFMLQAKVSELKNNMKT 1322
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
772-1299 |
2.58e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.55 E-value: 2.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 772 KLREELAIKSGQVEHLQQEtaalKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVH 851
Cdd:PRK03918 211 EISSELPELREELEKLEKE----VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 852 GEKRTAEaELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEAR--- 928
Cdd:PRK03918 287 ELKEKAE-EYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElye 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 929 --KAITEQKQKMRRLGSDLTSAQ-----KEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSS---DSSL 998
Cdd:PRK03918 366 eaKAKKEELERLKKRLTGLTPEKlekelEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcGREL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 999 ALHERIQALEAELQAVSHsktlLEKELQEVIALTSQELEESR--EKVLELEDELQESRGFRKKIKRLEESNKKLALE-LE 1075
Cdd:PRK03918 446 TEEHRKELLEEYTAELKR----IEKELKEIEEKERKLRKELRelEKVLKKESELIKLKELAEQLKELEEKLKKYNLEeLE 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1076 HEKGKLTGLGQSNAALREHNSILETALaKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKvnSLKEqv 1155
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKGEIKSLKKEL-EKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEE--RLKE-- 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1156 aaakVEAGHNRrhfkaaSLELSEVKKELQAKEHLVQKLQAEADdlqiregKHSQEIAQFQAELAEARAQLQLLqkqldeq 1235
Cdd:PRK03918 597 ----LEPFYNE------YLELKDAEKELEREEKELKKLEEELD-------KAFEELAETEKRLEELRKELEEL------- 652
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 1236 lsKQPVGNQEMENLKWEVDQKEREIQSLkqqldlteqqgRKELEGLQQLLQNVKSELEMAQEDL 1299
Cdd:PRK03918 653 --EKKYSEEEYEELREEYLELSRELAGL-----------RAELEELEKRREEIKKTLEKLKEEL 703
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
513-1204 |
1.04e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 66.68 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 513 ERTTLTSKLKASQAEISSLQSVRQWYQQQlalaqeARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQLTETQHRSM 592
Cdd:pfam15921 279 EITGLTEKASSARSQANSIQSQLEIIQEQ------ARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLV 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 593 KEKGRIAAQLQgiEADMLDQEAAFMQIQEAKTMVeeDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQL 672
Cdd:pfam15921 353 LANSELTEART--ERDQFSQESGNLDDQLQKLLA--DLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEV 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 673 EALQQehldLMKqlTLTQEALQSREQSLDALQTHYDELQaRLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEEL 752
Cdd:pfam15921 429 QRLEA----LLK--AMKSECQGQMERQMAAIQGKNESLE-KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 753 DRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKK---QMQKIKEQFLQQKVMVEAYRRDATSKDQLISE- 828
Cdd:pfam15921 502 TASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQMAEKDKVIEILRQQIENMTQLVGQh 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 829 ------LKATRKRLDSELKELRQELMQVHGEK-------RTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMeth 895
Cdd:pfam15921 582 grtagaMQVEKAQLEKEINDRRLELQEFKILKdkkdakiRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQL--- 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 896 LQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALA 975
Cdd:pfam15921 659 LNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITA 738
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 976 AKEAADAELGQLR----AQGGSSDSSLALHERIQALEAELQAVSHSKTLLEKELQeviALTSQElEESREKVLELEDELQ 1051
Cdd:pfam15921 739 KRGQIDALQSKIQfleeAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE---VLRSQE-RRLKEKVANMEVALD 814
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1052 ESR----GFRKKIKRLEESNKKLALELEHEKGKLTGLG-QSNAALREHnsILETALAKREADLVQLNLQVQAVLQR---- 1122
Cdd:pfam15921 815 KASlqfaECQDIIQRQEQESVRLKLQHTLDVKELQGPGyTSNSSMKPR--LLQPASFTRTHSNVPSSQSTASFLSHhsrk 892
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1123 ----KEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAkVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEAD 1198
Cdd:pfam15921 893 tnalKEDPTRDLKQLLQELRSVINEEPTVQLSKAEDKGRA-PSLGALDDRVRDCIIESSLRSDICHSSSNSLQTEGSKSS 971
|
....*.
gi 1955007402 1199 DLQIRE 1204
Cdd:pfam15921 972 ETCSRE 977
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1002-1300 |
1.82e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.86 E-value: 1.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1002 ERIQALEAELQ-----AVSHSKTLLEKELQEV---IALTSQELEESREKVLELEDELQESRGFRKKI-KRLEESNKKLAL 1072
Cdd:TIGR02169 211 ERYQALLKEKReyegyELLKEKEALERQKEAIerqLASLEEELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGEEEQL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1073 ELEHEKGKLTG-LGQSNAALREHNSILETAlakrEADLVQLNLQVQAVLQRKEEEDRQmkhlVQALQASLEKEKEKVNSL 1151
Cdd:TIGR02169 291 RVKEKIGELEAeIASLERSIAEKERELEDA----EERLAKLEAEIDKLLAEIEELERE----IEEERKRRDKLTEEYAEL 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1152 KEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARAqlqllqkq 1231
Cdd:TIGR02169 363 KEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEA-------- 434
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955007402 1232 ldeqlsKQPVGNQEMENLKWEVDQKEREIQSLKQQLDlteqQGRKELEGLQQLLQNVKSELEMAQEDLS 1300
Cdd:TIGR02169 435 ------KINELEEEKEDKALEIKKQEWKLEQLAADLS----KYEQELYDLKEEYDRVEKELSKLQRELA 493
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
368-1070 |
3.22e-10 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 64.99 E-value: 3.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 368 LQVLKEKMRLEGQLEALSLEAS----------QALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDTLKQSC 437
Cdd:TIGR00618 183 LMEFAKKKSLHGKAELLTLRSQlltlctpcmpDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 438 WDLERAMTDLQNMLEAknASLASSNNDLQVAEEQYQRLMAKVEdmqrsmlskdntvhDLRQQMTALQSQLQQVQLERTTL 517
Cdd:TIGR00618 263 KQLRARIEELRAQEAV--LEETQERINRARKAAPLAAHIKAVT--------------QIEQQAQRIHTELQSKMRSRAKL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 518 TSKLKASQAEISSLQSVRQWYQQqlALAQEARVRLQGEmahiqvgqmTQAGLLEHlklenvsLSQQLTETQH-RSMKEKG 596
Cdd:TIGR00618 327 LMKRAAHVKQQSSIEEQRRLLQT--LHSQEIHIRDAHE---------VATSIREI-------SCQQHTLTQHiHTLQQQK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 597 RIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRmadSAASLEQQLEQVKLTLLQRDQQLEALQ 676
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQR---YAELCAAAITCTAQCEKLEKIHLQESA 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 677 QEhLDLMKQLTLTQEALQSREQSLDALQTHydelqaRLGELQGEAASREDTiCLLQNEKIILEAALQAAKSGKEELDRGA 756
Cdd:TIGR00618 466 QS-LKEREQQLQTKEQIHLQETRKKAVVLA------RLLELQEEPCPLCGS-CIHPNPARQDIDNPGPLTRRMQRGEQTY 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 757 RRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYR----RDATSKDQLISELKAT 832
Cdd:TIGR00618 538 AQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQdlteKLSEAEDMLACEQHAL 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 833 RKRLDSEL--KELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADL------EGHLQSAQKERDEMETHLQSLQFDKE 904
Cdd:TIGR00618 618 LRKLQPEQdlQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALsirvlpKELLASRQLALQKMQSEKEQLTYWKE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 905 Q-------MVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYEN-------AVGILSRRL 970
Cdd:TIGR00618 698 MlaqcqtlLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEahfnnneEVTAALQTG 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 971 QEALAAKEAADAELGQLRAQGGSSDSSLALHEriQALEAELQAVSHSKTLLEKELQEV---IALTSQELEESREKVLELE 1047
Cdd:TIGR00618 778 AELSHLAAEIQFFNRLREEDTHLLKTLEAEIG--QEIPSDEDILNLQCETLVQEEEQFlsrLEEKSATLGEITHQLLKYE 855
|
730 740
....*....|....*....|...
gi 1955007402 1048 DELQESRGFRKKIKRLEESNKKL 1070
Cdd:TIGR00618 856 ECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
424-965 |
3.90e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.94 E-value: 3.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 424 DSLSSEVDTLKqscwDLERAMTDLQNMLEAknaslassnndLQVAEEQYQRLMAKVEDMQ-----RSMLSKDN---TVHD 495
Cdd:COG4913 228 DALVEHFDDLE----RAHEALEDAREQIEL-----------LEPIRELAERYAAARERLAeleylRAALRLWFaqrRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 496 LRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQsvRQWYQ---QQLALAQEARVRLQGEMAHIQVGQMTQAGLLEH 572
Cdd:COG4913 293 LEAELEELRAELARLEAELERLEARLDALREELDELE--AQIRGnggDRLEQLEREIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 573 LKLENVSLSQQLTETQHRSMKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKtmveEDLQRRLEEFEGERERL-QRMADSA 651
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRREL----RELEAEIASLERRKSNIpARLLALR 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 652 ASLEQQLE-------------QVK------------------LTLLQRDQQ----LEALQQEHLdlmkQLTLTQEALQSR 696
Cdd:COG4913 447 DALAEALGldeaelpfvgeliEVRpeeerwrgaiervlggfaLTLLVPPEHyaaaLRWVNRLHL----RGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 697 EQSLDALQTHYDELQARL--------GELQGEAASREDTIC------LLQNEKIILEAALQAAKSGKEELD--RGARRLE 760
Cdd:COG4913 523 LPDPERPRLDPDSLAGKLdfkphpfrAWLEAELGRRFDYVCvdspeeLRRHPRAITRAGQVKGNGTRHEKDdrRRIRSRY 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 761 EGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQF--LQQKVMVEAYRRDATSKDQLISELKATRKRLD- 837
Cdd:COG4913 603 VLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERReaLQRLAEYSWDEIDVASAEREIAELEAELERLDa 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 838 --SELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQS-LQFDKEQMVavteANE 914
Cdd:COG4913 683 ssDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERF----AAA 758
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 915 ALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGI 965
Cdd:COG4913 759 LGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDA 809
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
578-933 |
4.20e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 64.70 E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 578 VSLSQQLTETQHR--SMK-EKGRIAAQLQGIEADMldqEAAFMQIQEAKTMVEEdLQRRLEEFEGERERLQRMAdsaASL 654
Cdd:TIGR02169 670 RSEPAELQRLRERleGLKrELSSLQSELRRIENRL---DELSQELSDASRKIGE-IEKEIEQLEQEEEKLKERL---EEL 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 655 EQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSL-----DALQTHYDELQARLGELQGEAASREDTIC 729
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLshsriPEIQAELSKLEEEVSRIEARLREIEQKLN 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 730 LLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQK 809
Cdd:TIGR02169 823 RLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 810 VMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHgEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKER 889
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE-EIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEY 981
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1955007402 890 DEMETHLQSLqfdKEQMVAVTEANEALKKQIEELQQEARKAITE 933
Cdd:TIGR02169 982 EEVLKRLDEL---KEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
629-1157 |
1.10e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 63.14 E-value: 1.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 629 DLQRRLEEFEGERERLQRMADSAASLEQQLEQvkltllqRDQQLEALQQEHLDLmkqltltQEALQSREQSLDALQTHYD 708
Cdd:PRK02224 217 ELDEEIERYEEQREQARETRDEADEVLEEHEE-------RREELETLEAEIEDL-------RETIAETEREREELAEEVR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 709 ELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQ 788
Cdd:PRK02224 283 DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELR 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 789 QETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREV 868
Cdd:PRK02224 363 EEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERV 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 869 AQVRQHMAdlEGHLQSAQKERDEMEtHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAiteqkqkmrrlgSDLTSA 948
Cdd:PRK02224 443 EEAEALLE--AGKCPECGQPVEGSP-HVETIEEDRERVEELEAELEDLEEEVEEVEERLERA------------EDLVEA 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 949 QKEMKTKHKAYENavgiLSRRLQEALAAKEAADAELGQLRAQGGSSDSSlALHERIQALEAELQAvshsktllEKELQEV 1028
Cdd:PRK02224 508 EDRIERLEERRED----LEELIAERRETIEEKRERAEELRERAAELEAE-AEEKREAAAEAEEEA--------EEAREEV 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1029 IALTS--QELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALRE--HNSILETALAK 1104
Cdd:PRK02224 575 AELNSklAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAefDEARIEEARED 654
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1955007402 1105 REaDLVQLNLQVQAVLQRKEEEdrqmKHLVQALQASLEKEKEKVNSLKEQVAA 1157
Cdd:PRK02224 655 KE-RAEEYLEQVEEKLDELREE----RDDLQAEIGAVENELEELEELRERREA 702
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
648-888 |
1.13e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.09 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 648 ADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASredt 727
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE---- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 728 icllqnekiiLEAALQAAksgKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQ 807
Cdd:COG4942 95 ----------LRAELEAQ---KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 808 QKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQK 887
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
.
gi 1955007402 888 E 888
Cdd:COG4942 242 R 242
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
353-703 |
1.46e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.15 E-value: 1.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 353 SVSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDT 432
Cdd:TIGR02168 665 SAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 433 LKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQVAEEQYQRLMAKVEDMQRSMLSkdntvhdLRQQMTALQSQLQQVQL 512
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA-------LREALDELRAELTLLNE 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 513 ERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQ--------- 583
Cdd:TIGR02168 818 EAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAlallrsele 897
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 584 -LTETQHRSMKEKGRIAAQLQG----IEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERL----QRMADSAASL 654
Cdd:TIGR02168 898 eLSEELRELESKRSELRRELEElrekLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIeddeEEARRRLKRL 977
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1955007402 655 EQQLEQ---VKLTLLqrdQQLEALQQEHLDLMKQLTLTQEALQSREQSLDAL 703
Cdd:TIGR02168 978 ENKIKElgpVNLAAI---EEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
778-1223 |
1.79e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.48 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 778 AIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTA 857
Cdd:COG4717 42 FIRAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 858 EAELS--RLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLqfdkeqmvavteanEALKKQIEELQQEARKAITEQK 935
Cdd:COG4717 122 EKLLQllPLYQELEALEAELAELPERLEELEERLEELRELEEEL--------------EELEAELAELQEELEELLEQLS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 936 QKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALA--AKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQA 1013
Cdd:COG4717 188 LATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEelEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGS 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1014 VSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKI----KRLEESNKKLALELEHEKGKLTGLGQSNA 1089
Cdd:COG4717 268 LLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEeleeEELEELLAALGLPPDLSPEELLELLDRIE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1090 ALREHNSILETalAKREADLVQLNLQVQAVLQRKEEEDRQMkhLVQALQASLEKE--KEKVNSLKEQVAAAKVEAGHNRR 1167
Cdd:COG4717 348 ELQELLREAEE--LEEELQLEELEQEIAALLAEAGVEDEEE--LRAALEQAEEYQelKEELEELEEQLEELLGELEELLE 423
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1168 HFKAASL--ELSEVKKELQAKEHLVQKLQAEADDL--QIREGKHSQEIAQFQAELAEARA 1223
Cdd:COG4717 424 ALDEEELeeELEELEEELEELEEELEELREELAELeaELEQLEEDGELAELLQELEELKA 483
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
655-1204 |
2.74e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.11 E-value: 2.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 655 EQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSR-------EQSLDALQTHYDELQARLGELQGEAASREDT 727
Cdd:pfam01576 11 EEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAEtelcaeaEEMRARLAARKQELEEILHELESRLEEEEER 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 728 ICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQ 807
Cdd:pfam01576 91 SQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 808 QKVMVEAYRRDATSKDQLISELKATRKRLDselkELRQELMQVhgeKRTAEAELSRLHREVAQVRQHMADLEGHLqsaQK 887
Cdd:pfam01576 171 EEEKAKSLSKLKNKHEAMISDLEERLKKEE----KGRQELEKA---KRKLEGESTDLQEQIAELQAQIAELRAQL---AK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 888 ERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQ--EARKAITEQKQKMRR-LGSDL-------------TSAQKE 951
Cdd:pfam01576 241 KEEELQAALARLEEETAQKNNALKKIRELEAQISELQEdlESERAARNKAEKQRRdLGEELealkteledtldtTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 952 MKTKHkayENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSdsslaLHERIQALEAELQAVSHSKTLLEKE---LQEV 1028
Cdd:pfam01576 321 LRSKR---EQEVTELKKALEEETRSHEAQLQEMRQKHTQALEE-----LTEQLEQAKRNKANLEKAKQALESEnaeLQAE 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1029 IALTSQELEESREKVLELEDELQE-----SRGFRKKIKRLEESNkKLALELEHEKGKLtglgqsnaalrehnSILETALA 1103
Cdd:pfam01576 393 LRTLQQAKQDSEHKRKKLEGQLQElqarlSESERQRAELAEKLS-KLQSELESVSSLL--------------NEAEGKNI 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1104 KREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQAsLEKEKekvNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKEL 1183
Cdd:pfam01576 458 KLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQ-LEDER---NSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKL 533
|
570 580
....*....|....*....|....*...
gi 1955007402 1184 Q-------AKEHLVQKLQAEADDLQIRE 1204
Cdd:pfam01576 534 EedagtleALEEGKKRLQRELEALTQQL 561
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
635-1317 |
2.89e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.01 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 635 EEFEGERERLQRMADSAaslEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLtQEALQSREQSLDALQthYDELQARL 714
Cdd:TIGR02169 166 AEFDRKKEKALEELEEV---EENIERLDLIIDEKRQQLERLRREREKAERYQAL-LKEKREYEGYELLKE--KEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 715 GELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETsetlekLREELAIKSGQVEHLQQETAAL 794
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIAEK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 795 KKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQH 874
Cdd:TIGR02169 314 ERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 875 MADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKT 954
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 955 KHKAYEnavgILSRRLQealaakeaadaelgqlraqggssdsslALHERIQALEAELQAVSHS-------KTLLEKELQE 1027
Cdd:TIGR02169 474 LKEEYD----RVEKELS---------------------------KLQRELAEAEAQARASEERvrggravEEVLKASIQG 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1028 VIALTSQELEESREKVLELEDELQESRGFrkkIKRLEESNKKLALEL--EHEKGKLT--GLGQSNAALREHNSILETALA 1103
Cdd:TIGR02169 523 VHGTVAQLGSVGERYATAIEVAAGNRLNN---VVVEDDAVAKEAIELlkRRKAGRATflPLNKMRDERRDLSILSEDGVI 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1104 KREADLVQLNLQVQA----------VLQRKEEEDRQMkhlVQALQASLEKEkekvnsLKEQVAAakVEAGHNRRhfKAAS 1173
Cdd:TIGR02169 600 GFAVDLVEFDPKYEPafkyvfgdtlVVEDIEAARRLM---GKYRMVTLEGE------LFEKSGA--MTGGSRAP--RGGI 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1174 LELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARaqlqllqkqldeqlskqpvgnqemenlkwev 1253
Cdd:TIGR02169 667 LFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDAS------------------------------- 715
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 1254 dQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELK 1317
Cdd:TIGR02169 716 -RKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLE 778
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
789-1303 |
3.51e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 61.67 E-value: 3.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 789 QETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLH--- 865
Cdd:pfam15921 138 QSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHfrs 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 866 -------------REVAQVRQHMADLEGHLQSAQKE-RDEMETHLQSLQFDKEQMV----------------AVTEANeA 915
Cdd:pfam15921 218 lgsaiskilreldTEISYLKGRIFPVEDQLEALKSEsQNKIELLLQQHQDRIEQLIseheveitgltekassARSQAN-S 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 916 LKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSD 995
Cdd:pfam15921 297 IQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLD 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 996 SSLA-----LHERIQALEAELQ--------------AVSHSKTLLEKELQEVIALTS--------------------QEL 1036
Cdd:pfam15921 377 DQLQklladLHKREKELSLEKEqnkrlwdrdtgnsiTIDHLRRELDDRNMEVQRLEAllkamksecqgqmerqmaaiQGK 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1037 EESREKVLELEDELQESRGFRKKIKRlEESNKKLALELEHEKgkltgLGQSNAALREHNSILETALAKREADLVQLNLQV 1116
Cdd:pfam15921 457 NESLEKVSSLTAQLESTKEMLRKVVE-ELTAKKMTLESSERT-----VSDLTASLQEKERAIEATNAEITKLRSRVDLKL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1117 QAVLQRKEEED--RQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKehlvqklQ 1194
Cdd:pfam15921 531 QELQHLKNEGDhlRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDR-------R 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1195 AEADDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQG 1274
Cdd:pfam15921 604 LELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNF 683
|
570 580
....*....|....*....|....*....
gi 1955007402 1275 RKELEGLQQLLQNVKSELEMAQEDLSMTQ 1303
Cdd:pfam15921 684 RNKSEEMETTTNKLKMQLKSAQSELEQTR 712
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
747-1075 |
3.57e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 3.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 747 SGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETA-ALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQL 825
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREkAERYQALLKEKREYEGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 826 ISELKATRK---RLDSELKELRQELMQVHGEKRTAEAELSRL-HREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQ- 900
Cdd:TIGR02169 243 ERQLASLEEeleKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEe 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 901 ---FDKEQMVAVTEANEALKKQIEELQQEARK---AITEQKQKMRRLGSDLTSAQKEMKT---KHKAYENAVGILSRRLQ 971
Cdd:TIGR02169 323 rlaKLEAEIDKLLAEIEELEREIEEERKRRDKlteEYAELKEELEDLRAELEEVDKEFAEtrdELKDYREKLEKLKREIN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 972 EALAAKEAADAELGQLRAQGGSsdsslaLHERIQALEAELQAVSHSKtlleKELQEVIALTSQELEESREKvleLEDELQ 1051
Cdd:TIGR02169 403 ELKRELDRLQEELQRLSEELAD------LNAAIAGIEAKINELEEEK----EDKALEIKKQEWKLEQLAAD---LSKYEQ 469
|
330 340
....*....|....*....|....
gi 1955007402 1052 ESRGFRKKIKRLEESNKKLALELE 1075
Cdd:TIGR02169 470 ELYDLKEEYDRVEKELSKLQRELA 493
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
620-1322 |
6.42e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 60.76 E-value: 6.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 620 QEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQS 699
Cdd:pfam02463 224 EYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 700 LDALQTHYD-----ELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRgaRRLEEGTEETSETLEKLR 774
Cdd:pfam02463 304 KLERRKVDDeeklkESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEK--LQEKLEQLEEELLAKKKL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 775 EELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATR--KRLDSELKELRQELMQVHG 852
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIElkQGKLTEEKEELEKQELKLL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 853 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSL-------------------------------QF 901
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGlkvllalikdgvggriisahgrlgdlgvaveNY 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 902 DKEQMVAVTEANEALKKQIEElQQEARKAITEQKQKMRRLGSDLTSAQKEMKtkhKAYENAVGILSRRLQEALAAKEAAD 981
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEE-RQKLVRALTELPLGARKLRLLIPKLKLPLK---SIAVLEIDPILNLAQLDKATLEADE 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 982 AELGQLRAQGGSSDSSLA-LHERIQALEAELQAVShSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKI 1060
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTkLKESAKAKESGLRKGV-SLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILR 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1061 KRLEESNKKLALELEHEKGKLTGLGQSNAALRE--HNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQ 1138
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEaqDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1139 ASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKhsqEIAQFQAEL 1218
Cdd:pfam02463 777 AEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKE---EQKLEKLAE 853
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1219 AEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQED 1298
Cdd:pfam02463 854 EELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKY 933
|
730 740
....*....|....*....|....
gi 1955007402 1299 LSMTQKDKFMLQAKVSELKNNMKT 1322
Cdd:pfam02463 934 EEEPEELLLEEADEKEKEENNKEE 957
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
772-1297 |
3.83e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.11 E-value: 3.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 772 KLREELAIKSGQVEHLQQETAALKKQMQKIKEQflQQKVMVEayrrdatskdqlISELKATRKRLDSELKELRQELMQVH 851
Cdd:TIGR04523 107 KINSEIKNDKEQKNKLEVELNKLEKQKKENKKN--IDKFLTE------------IKKKEKELEKLNNKYNDLKKQKEELE 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 852 GEKRTAEAELSRLHREVAQVRQHMADLEgHLQSAQKERDEMETHLQSlqfdkeQMVAVTEANEALKKQIEELQQEARK-- 929
Cdd:TIGR04523 173 NELNLLEKEKLNIQKNIDKIKNKLLKLE-LLLSNLKKKIQKNKSLES------QISELKKQNNQLKDNIEKKQQEINEkt 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 930 -AITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSrRLQEALAAKEAADAELGQLRAQGGSSDsslaLHERIQALE 1008
Cdd:TIGR04523 246 tEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK-ELEKQLNQLKSEISDLNNQKEQDWNKE----LKSELKNQE 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1009 AELQAVSHSKTLLEK---ELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKG----KL 1081
Cdd:TIGR04523 321 KKLEEIQNQISQNNKiisQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINdlesKI 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1082 TGLGQSNAALREHNSILET---ALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAA 1158
Cdd:TIGR04523 401 QNQEKLNQQKDEQIKKLQQekeLLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1159 KVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSK 1238
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLE 560
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 1239 QPVG--NQEMENLKWE---VDQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQE 1297
Cdd:TIGR04523 561 KEIDekNKEIEELKQTqksLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKK 624
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
643-1300 |
4.08e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.31 E-value: 4.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 643 RLQRMADSAASLEQQLEQVKLTLLQrdqqleaLQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEaa 722
Cdd:pfam12128 235 GIMKIRPEFTKLQQEFNTLESAELR-------LSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDE-- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 723 sredticlLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEklrEELAIKSGQVEHLQQETAALKKQMQKIK 802
Cdd:pfam12128 306 --------LNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQ---EQLPSWQSELENLEERLKALTGKHQDVT 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 803 EQFLQQKVMVEayRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTA-EAELSRLHREVAQVRQHMADLEGH 881
Cdd:pfam12128 375 AKYNRRRSKIK--EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQlEAGKLEFNEEEYRLKSRLGELKLR 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 882 LQSAQKERDEMethLQSLQFDkEQMVAVTEANEALKKQIEELQQE---ARKAITEQKQKMRRLGSDLTSAQKEMKTKHKA 958
Cdd:pfam12128 453 LNQATATPELL---LQLENFD-ERIERAREEQEAANAEVERLQSElrqARKRRDQASEALRQASRRLEERQSALDELELQ 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 959 YENAVGILsrrLQEALAAKEAADAELGQL--RAQGGSSD-------SSLALHERIQALEAELQAVSHSKTL-LEKELQEV 1028
Cdd:pfam12128 529 LFPQAGTL---LHFLRKEAPDWEQSIGKVisPELLHRTDldpevwdGSVGGELNLYGVKLDLKRIDVPEWAaSEEELRER 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1029 IALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQS-----NAALREHNSILETALA 1103
Cdd:pfam12128 606 LDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSekdkkNKALAERKDSANERLN 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1104 KREADLVQLNLQVQAVLQRKEEEDRQMK-HLVQALQASLEKEKEKVNSLKEQVAAAKVEAghnRRHFKAASlelSEVKKE 1182
Cdd:pfam12128 686 SLEAQLKQLDKKHQAWLEEQKEQKREARtEKQAYWQVVEGALDAQLALLKAAIAARRSGA---KAELKALE---TWYKRD 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1183 LQAKehlvqklqaeaDDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPvgnQEMENLKWEVDQKEREIQS 1262
Cdd:pfam12128 760 LASL-----------GVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWL---QRRPRLATQLSNIERAISE 825
|
650 660 670
....*....|....*....|....*....|....*...
gi 1955007402 1263 LKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQEDLS 1300
Cdd:pfam12128 826 LQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLR 863
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
597-1074 |
4.56e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.13 E-value: 4.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 597 RIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQ 676
Cdd:PRK02224 311 AVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELE 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 677 QEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTIcllqNEKIILEAALQAAKSGKEELDRGa 756
Cdd:PRK02224 391 EEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERV----EEAEALLEAGKCPECGQPVEGSP- 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 757 rrleegteetsetlekLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKD------QLISELK 830
Cdd:PRK02224 466 ----------------HVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEErredleELIAERR 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 831 ATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMEThlqslqfdkeqMVAVT 910
Cdd:PRK02224 530 ETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER-----------IRTLL 598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 911 EANEALKKQIEELQqEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKayENAVGILSRRLQEALAAKEAADAELGQLRAQ 990
Cdd:PRK02224 599 AAIADAEDEIERLR-EKREALAELNDERRERLAEKRERKRELEAEFD--EARIEEAREDKERAEEYLEQVEEKLDELREE 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 991 GGSsdsslaLHERIQALEAELQavshsktllekelqevialtsqELEESREKVLELEDELQESRGFRKKIKRLEESNKKL 1070
Cdd:PRK02224 676 RDD------LQAEIGAVENELE----------------------ELEELRERREALENRVEALEALYDEAEELESMYGDL 727
|
....
gi 1955007402 1071 ALEL 1074
Cdd:PRK02224 728 RAEL 731
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
364-1201 |
6.94e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 57.49 E-value: 6.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 364 QEEMLQVLKEK-MRLEGQLEALSLEASQALKEKAELQAQLAA--------------LSTKLQAQVECSHSSQQRQDSLSS 428
Cdd:pfam01576 10 KEEELQKVKERqQKAESELKELEKKHQQLCEEKNALQEQLQAetelcaeaeemrarLAARKQELEEILHELESRLEEEEE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 429 EVDTLKQSCWDLERAMTDLQNMLEAKNAslasSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQM---TALQS 505
Cdd:pfam01576 90 RSQQLQNEKKKMQQHIQDLEEQLDEEEA----ARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLeerISEFT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 506 QLQQVQLERTTLTSKLKASQ-AEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQL 584
Cdd:pfam01576 166 SNLAEEEEKAKSLSKLKNKHeAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEEL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 585 TETQHRSMKEKGRIAAQLQGI---EADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAAS-------L 654
Cdd:pfam01576 246 QAALARLEEETAQKNNALKKIrelEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAqqelrskR 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 655 EQQLEQVKLTLLQR----DQQLEALQQEHL----DLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREd 726
Cdd:pfam01576 326 EQEVTELKKALEEEtrshEAQLQEMRQKHTqaleELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSE- 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 727 ticllqNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFl 806
Cdd:pfam01576 405 ------HKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELL- 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 807 qqkvmveayRRDATSKDQLISELKAtrkrLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQ 886
Cdd:pfam01576 478 ---------QEETRQKLNLSTRLRQ----LEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALE 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 887 KERDEMETHLQSLqfdKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKmRRLGSDLTSAQKEMKtKHKAYENAVG-- 964
Cdd:pfam01576 545 EGKKRLQRELEAL---TQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQ-RQLVSNLEKKQKKFD-QMLAEEKAISar 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 965 ILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEK---ELQEVIALTSQELEESRE 1041
Cdd:pfam01576 620 YAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKnvhELERSKRALEQQVEEMKT 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1042 KVLELEDELQESRGFRkkiKRLEESNKKLALELEHEKGKLTGLG-----QSNAALREHNSILE----------TALAKRE 1106
Cdd:pfam01576 700 QLEELEDELQATEDAK---LRLEVNMQALKAQFERDLQARDEQGeekrrQLVKQVRELEAELEderkqraqavAAKKKLE 776
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1107 ADLVQLNLQVQAVLQRKEEEDRQMKHLvQALQASLEKEKEKVNSLKEQVAAAKVEaghNRRHFKAASLELSEVKKELQAK 1186
Cdd:pfam01576 777 LDLKELEAQIDAANKGREEAVKQLKKL-QAQMKDLQRELEEARASRDEILAQSKE---SEKKLKNLEAELLQLQEDLAAS 852
|
890
....*....|....*
gi 1955007402 1187 EHLVQKLQAEADDLQ 1201
Cdd:pfam01576 853 ERARRQAQQERDELA 867
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
831-1319 |
1.20e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 56.29 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 831 ATRKRLDSELKELRQELMQVHGEKRTAEAELSR----LHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQM 906
Cdd:pfam05557 2 AELIESKARLSQLQNEKKQMELEHKRARIELEKkasaLKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 907 VAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYEnavgilsrRLQEALAAKEAADAELGQ 986
Cdd:pfam05557 82 KKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELE--------ELQERLDLLKAKASEAEQ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 987 LRAQGGSSDSSLALHE-RIQALEAELQAVSHSKTLLEKELQEVIALTSQE------------LEESREKVLELEDELQes 1053
Cdd:pfam05557 154 LRQNLEKQQSSLAEAEqRIKELEFEIQSQEQDSEIVKNSKSELARIPELEkelerlrehnkhLNENIENKLLLKEEVE-- 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1054 rGFRKKIKRLEESNKKLA---LELEHEKGKLTG---LGQSNA-------ALREHNSIL---ETALAKREADLVQLNLQVQ 1117
Cdd:pfam05557 232 -DLKRKLEREEKYREEAAtleLEKEKLEQELQSwvkLAQDTGlnlrspeDLSRRIEQLqqrEIVLKEENSSLTSSARQLE 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1118 AVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEaghnrRHFKAASLElsEVKKELQAKEHLVQKLQaea 1197
Cdd:pfam05557 311 KARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKE-----RDGYRAILE--SYDKELTMSNYSPQLLE--- 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1198 ddlqiREGKHSQEIAQFQAELAEARAQLQllqkqldeqlskqpVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKE 1277
Cdd:pfam05557 381 -----RIEEAEDMTQKMQAHNEEMEAQLS--------------VAEEELGGYKQQAQTLERELQALRQQESLADPSYSKE 441
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1955007402 1278 -----------LEGLQQLLQNVKSELEMAQEDLSMtQKDKFMLQAKVSELKNN 1319
Cdd:pfam05557 442 evdslrrkletLELERQRLREQKNELEMELERRCL-QGDYDPKKTKVLHLSMN 493
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
362-963 |
1.29e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.46 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 362 ETQEEMLQVLKEKMRLEgQLEALSLEASQALKEKAELQAQLAALstKLQAQVECSHSSQQRQDSLSSEVDTLKQSCWDLE 441
Cdd:COG4913 239 RAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 442 RAMTDLQNML-EAKNASLASSNNDLQVAEEQYQRLMAKVEDMQRsmlskdntvhDLRQQMTALQSQLQQVQLERTTLTSK 520
Cdd:COG4913 316 ARLDALREELdELEAQIRGNGGDRLEQLEREIERLERELEERER----------RRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 521 LKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAhiqvgqmtqagllehlklenvSLSQQLTETQHRsmkeKGRIAA 600
Cdd:COG4913 386 RAEAAALLEALEEELEALEEALAEAEAALRDLRRELR---------------------ELEAEIASLERR----KSNIPA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 601 QLQgieaDMLDQeaafmqIQEAKTMVEEDLQrrleeFEGE------RERLQRMAdsaasLEQQLEQVKLTLLQRDQQ--- 671
Cdd:COG4913 441 RLL----ALRDA------LAEALGLDEAELP-----FVGElievrpEEERWRGA-----IERVLGGFALTLLVPPEHyaa 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 672 -LEALQQEHLdlmkQLTLTQEALQSREQSLDALQTHYDELQARL--------GELQGEAASREDTICL-----LQNEkii 737
Cdd:COG4913 501 aLRWVNRLHL----RGRLVYERVRTGLPDPERPRLDPDSLAGKLdfkphpfrAWLEAELGRRFDYVCVdspeeLRRH--- 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 738 lEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRR 817
Cdd:COG4913 574 -PRAITRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 818 DATSKDQLIsELKATRKRLDselkELRQELMQVhgekRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQ 897
Cdd:COG4913 653 LAEYSWDEI-DVASAEREIA----ELEAELERL----DASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE 723
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1955007402 898 SLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAV 963
Cdd:COG4913 724 QAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
525-1151 |
1.48e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.46 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 525 QAEISSLQSVRQWYQQQLALAQEARV-RLQGEMAHIQVGQMTQAGL---LEHLKLENVSLSQQLTETQhrsmKEKGRIAA 600
Cdd:COG4913 248 REQIELLEPIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLeaeLEELRAELARLEAELERLE----ARLDALRE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 601 QLQGIEAdmldqeaafmQIQEAKTMVEEDLQRRLEEFEGERERLQRmadSAASLEQQLEQVKLTLLQRDQQLEALQQEHl 680
Cdd:COG4913 324 ELDELEA----------QIRGNGGDRLEQLEREIERLERELEERER---RRARLEALLAALGLPLPASAEEFAALRAEA- 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 681 dlmkqltltQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKsgkeeldrgarrle 760
Cdd:COG4913 390 ---------AALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR-------------- 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 761 egteetsetlEKLREELAIKSGQV-----------------------------------EHLQQETAALKKQMQKIKEQF 805
Cdd:COG4913 447 ----------DALAEALGLDEAELpfvgelievrpeeerwrgaiervlggfaltllvppEHYAAALRWVNRLHLRGRLVY 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 806 LQQKVMVEAYRRDATSKDQLISELK----ATRKRLDSEL------------KELRQELM------QVHGEKR-------- 855
Cdd:COG4913 517 ERVRTGLPDPERPRLDPDSLAGKLDfkphPFRAWLEAELgrrfdyvcvdspEELRRHPRaitragQVKGNGTrhekddrr 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 856 ----------TAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQfdkeqmvAVTEANEALKKqIEELQQ 925
Cdd:COG4913 597 rirsryvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQ-------RLAEYSWDEID-VASAER 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 926 EARkAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAvgilsrrlqealaakeaaDAELGQLRAQGGssdsslALHERIQ 1005
Cdd:COG4913 669 EIA-ELEAELERLDASSDDLAALEEQLEELEAELEEL------------------EEELDELKGEIG------RLEKELE 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1006 ALEAELQAVshsKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELE--------HE 1077
Cdd:COG4913 724 QAEEELDEL---QDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELEramrafnrEW 800
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 1078 KGKLTGLGQSNAALRE----HNSILETALAKREADLVQLnlqvqavlqRKEEEDRQMKHLVQALQASLEKEKEKVNSL 1151
Cdd:COG4913 801 PAETADLDADLESLPEylalLDRLEEDGLPEYEERFKEL---------LNENSIEFVADLLSKLRRAIREIKERIDPL 869
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
529-947 |
1.50e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 56.50 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 529 SSLQSVRQWY--QQQLALAQEARVRLQGEMAHIQVGQmtqagllEHLKLENVSLSQQLTETQHrSMKEKGRIAAQLQGIE 606
Cdd:COG3096 286 RALELRRELFgaRRQLAEEQYRLVEMARELEELSARE-------SDLEQDYQAASDHLNLVQT-ALRQQEKIERYQEDLE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 607 ADMLDQEAAFMQIQEAktmvEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQehldlmkql 686
Cdd:COG3096 358 ELTERLEEQEEVVEEA----AEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEK--------- 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 687 tlTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGArrleegteET 766
Cdd:COG3096 425 --ARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQ--------AW 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 767 SETLEKLRE--ELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQL---ISELKATRKRLDSELK 841
Cdd:COG3096 495 QTARELLRRyrSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELeelLAELEAQLEELEEQAA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 842 ELRQELMQVHGEKRTAEAELSRLH------REVAQVRQHMADLEG-HLQSAQKERDEMET---HLQSLQFDKEQMVavtE 911
Cdd:COG3096 575 EAVEQRSELRQQLEQLRARIKELAarapawLAAQDALERLREQSGeALADSQEVTAAMQQlleREREATVERDELA---A 651
|
410 420 430
....*....|....*....|....*....|....*.
gi 1955007402 912 ANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTS 947
Cdd:COG3096 652 RKQALESQIERLSQPGGAEDPRLLALAERLGGVLLS 687
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
470-1220 |
1.54e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 1.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 470 EQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEAR 549
Cdd:TIGR00618 176 DQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQ 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 550 VRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQltetqhrsmKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEED 629
Cdd:TIGR00618 256 LKKQQLLKQLRARIEELRAQEAVLEETQERINRA---------RKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 630 LQRRLE------EFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHlDLMKQLTLTQEALQSREQSLDAL 703
Cdd:TIGR00618 327 LMKRAAhvkqqsSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIH-TLQQQKTTLTQKLQSLCKELDIL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 704 QthydelqarlgELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGArrleegteetsetleklREELAIKSGQ 783
Cdd:TIGR00618 406 Q-----------REQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAI-----------------TCTAQCEKLE 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 784 VEHLQQETAALKKQMQKIKeqflQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVhGEKRTAEAELSR 863
Cdd:TIGR00618 458 KIHLQESAQSLKEREQQLQ----TKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQR 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 864 LHREVAQVRQHMADLEGHLQSAQKER----DEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMr 939
Cdd:TIGR00618 533 GEQTYAQLETSEEDVYHQLTSERKQRaslkEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLA- 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 940 rlgsdLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLalheRIQALEAELQAVSHSKT 1019
Cdd:TIGR00618 612 -----CEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHAL----SIRVLPKELLASRQLAL 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1020 LLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKlalELEHEKGKLtglgqsNAALREHNSILE 1099
Cdd:TIGR00618 683 QKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGS---DLAAREDAL------NQSLKELMHQAR 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1100 TALAKREADLVQLNLQVQAVLQRkeeeDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEV 1179
Cdd:TIGR00618 754 TVLKARTEAHFNNNEEVTAALQT----GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQE 829
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1955007402 1180 KKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAE 1220
Cdd:TIGR00618 830 EEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
735-1321 |
1.78e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.13 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 735 KIILEAAlqaakSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKE----------- 803
Cdd:pfam02463 156 LEIEEEA-----AGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLeleeeyllyld 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 804 ---------QFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQ- 873
Cdd:pfam02463 231 ylklneeriDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKv 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 874 --------HMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDL 945
Cdd:pfam02463 311 ddeeklkeSEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAA 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 946 TSAQKEMKTKHKAyENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEKEL 1025
Cdd:pfam02463 391 KLKEEELELKSEE-EKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1026 QEVIALTSQELEESREKVLELEDELQESRGFRKKIKRlEESNKKLALELEHEKGKLTGLGQSNAALREhnsILETALAKR 1105
Cdd:pfam02463 470 SEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR-SGLKVLLALIKDGVGGRIISAHGRLGDLGV---AVENYKVAI 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1106 E-ADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVN---SLKEQVAAAKVEAGHNRRHFKAASLELSEVKK 1181
Cdd:pfam02463 546 StAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPlksIAVLEIDPILNLAQLDKATLEADEDDKRAKVV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1182 ELQAKEHLVQKLQAEADDLQIREGK-HSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREI 1260
Cdd:pfam02463 626 EGILKDTELTKLKESAKAKESGLRKgVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKE 705
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955007402 1261 QSLKQQLDLTEQQGRKELEGLQQLLQNV--------KSELEMAQEDLSMTQKDKFMLQAKVSELKNNMK 1321
Cdd:pfam02463 706 QREKEELKKLKLEAEELLADRVQEAQDKineelkllKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEK 774
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
792-1141 |
2.77e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 55.30 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 792 AALKKQMQKIKEQFLQQKVmveayrrDATSKDQLISELK--ATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHRE-V 868
Cdd:PRK11281 39 ADVQAQLDALNKQKLLEAE-------DKLVQQDLEQTLAllDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDnD 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 869 AQVRQHMADLEghLQSAQKERDEMETHLQSLQfdkeqmVAVTEANEALkkqieelqqearkaITEQKQKMRrlgsdltsA 948
Cdd:PRK11281 112 EETRETLSTLS--LRQLESRLAQTLDQLQNAQ------NDLAEYNSQL--------------VSLQTQPER--------A 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 949 QKEMktkhkaYENavgilSRRLQealaakeaadaelgQLRAQ-GGSSDSSLAL-HERIQALEAELQAVSHSKTLLEKELQ 1026
Cdd:PRK11281 162 QAAL------YAN-----SQRLQ--------------QIRNLlKGGKVGGKALrPSQRVLLQAEQALLNAQNDLQRKSLE 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1027 ---EVIALTSQELEESREKVLELEDELQESRGFRKKiKRLEESNKKLAlelEHEKGKLTGLGQSNAALR---EHNSILET 1100
Cdd:PRK11281 217 gntQLQDLLQKQRDYLTARIQRLEHQLQLLQEAINS-KRLTLSEKTVQ---EAQSQDEAARIQANPLVAqelEINLQLSQ 292
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1955007402 1101 ALAK---READLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASL 1141
Cdd:PRK11281 293 RLLKateKLNTLTQQNLRVKNWLDRLTQSERNIKEQISVLKGSL 336
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
360-1222 |
3.24e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.44 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 360 AAETQEEMLQVLKEKMRlEGQLEAlsleasQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSlssEVDTLKQSCWD 439
Cdd:TIGR00606 187 ALETLRQVRQTQGQKVQ-EHQMEL------KYLKQYKEKACEIRDQITSKEAQLESSREIVKSYEN---ELDPLKNRLKE 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 440 LERAMTDLQNmLEAKNASLASSNNDLQVAEEQYQRLMAKV-----EDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLER 514
Cdd:TIGR00606 257 IEHNLSKIMK-LDNEIKALKSRKKQMEKDNSELELKMEKVfqgtdEQLNDLYHNHQRTVREKERELVDCQRELEKLNKER 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 515 TTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMahiqvgqmtQAGLLEHLKLENVSLSQQLTETQHRSMKE 594
Cdd:TIGR00606 336 RLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRL---------ELDGFERGPFSERQIKNFHTLVIERQEDE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 595 KGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAasleQQLEQVKLTLLQRDQQLEA 674
Cdd:TIGR00606 407 AKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL----QQLEGSSDRILELDQELRK 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 675 LQQEhLDLMKQLTLTqEALQSREQSLDALQTHYDE----LQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKE 750
Cdd:TIGR00606 483 AERE-LSKAEKNSLT-ETLKKEVKSLQNEKADLDRklrkLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSD 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 751 ELDrGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAAL---KKQMQKIKEQFLQQKVMVEAYRRDATSKDQLIS 827
Cdd:TIGR00606 561 ELT-SLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLeqnKNHINNELESKEEQLSSYEDKLFDVCGSQDEES 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 828 ELKATRKRLDSELKEL----------RQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQ 897
Cdd:TIGR00606 640 DLERLKEEIEKSSKQRamlagatavySQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 898 SLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRR--LQEALA 975
Cdd:TIGR00606 720 KKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtiMERFQM 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 976 AKEAADAELGQLRAQGGSSDSSLA---LHERIQALEAELQAVSHSKTLLEK---ELQEVIALTSQELEESREKVLELEDE 1049
Cdd:TIGR00606 800 ELKDVERKIAQQAAKLQGSDLDRTvqqVNQEKQEKQHELDTVVSKIELNRKliqDQQEQIQHLKSKTNELKSEKLQIGTN 879
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1050 LQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNsilETALAKREADLVQLNLQVQAVLQRKEEEDRQ 1129
Cdd:TIGR00606 880 LQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK---EELISSKETSNKKAQDKVNDIKEKVKNIHGY 956
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1130 MKHLVQALQASLEKE-KEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKhs 1208
Cdd:TIGR00606 957 MKDIENKIQDGKDDYlKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVE-- 1034
|
890
....*....|....
gi 1955007402 1209 QEIAQFQAELAEAR 1222
Cdd:TIGR00606 1035 EELKQHLKEMGQMQ 1048
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
495-725 |
3.78e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 3.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 495 DLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQvgqmtqagllEHLK 574
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR----------AELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 575 LENVSLSQQLTETQhrSMKEKGRIAAQLQGieADMLDQEAAFMQIQEaktmVEEDLQRRLEEFEGERERLQRMADSAASL 654
Cdd:COG4942 101 AQKEELAELLRALY--RLGRQPPLALLLSP--EDFLDAVRRLQYLKY----LAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 655 EQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLtltQEALQSREQSLDALQTHYDELQARLGELQGEAASRE 725
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARL---EKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
690-1265 |
4.68e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 54.52 E-value: 4.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 690 QEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRgarRLEEGTEETSET 769
Cdd:PRK01156 189 EEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNR---YESEIKTAESDL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 770 LEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFlqqkvmveAYRRDATSKDQLISELKATRKRLDSELKELrqelmq 849
Cdd:PRK01156 266 SMELEKNNYYKELEERHMKIINDPVYKNRNYINDYF--------KYKNDIENKKQILSNIDAEINKYHAIIKKL------ 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 850 vhgekrtaeAELSRLHREVAQVRQHMADLEghlqsaqKERDEMEThlqslqfDKEQMVAVTEANEALKKQIEELQQEARK 929
Cdd:PRK01156 332 ---------SVLQKDYNDYIKKKSRYDDLN-------NQILELEG-------YEMDYNSYLKSIESLKKKIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 930 AITEQKQKMRRLGSD---LTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHEriQA 1006
Cdd:PRK01156 389 MSAFISEILKIQEIDpdaIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGE--EK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1007 LEAELQAVSHSKTLLEKELQEvIALTSQELEESREKVLELEDELQesrgfRKKIKRLEESNKKLA---LELEHEKGKLTG 1083
Cdd:PRK01156 467 SNHIINHYNEKKSRLEEKIRE-IEIEVKDIDEKIVDLKKRKEYLE-----SEEINKSINEYNKIEsarADLEDIKIKINE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1084 LG----QSNAALREHNSI-LETALAKRE----ADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQaSLEKEKEKVNSLKEQ 1154
Cdd:PRK01156 541 LKdkhdKYEEIKNRYKSLkLEDLDSKRTswlnALAVISLIDIETNRSRSNEIKKQLNDLESRLQ-EIEIGFPDDKSYIDK 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1155 VAAAKVEAGHNrrhfkaasleLSEVKKELQAKEHLVQKLQ----------AEADDLQIREGKHSQEIAQFQAELAEARAQ 1224
Cdd:PRK01156 620 SIREIENEANN----------LNNKYNEIQENKILIEKLRgkidnykkqiAEIDSIIPDLKEITSRINDIEDNLKKSRKA 689
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 1955007402 1225 LQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQ 1265
Cdd:PRK01156 690 LDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
593-1073 |
5.76e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 5.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 593 KEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEdLQRRLEEFEGERERLQRmadsAASLEQQLEQVKLTLlqRDQQL 672
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEKEERLEELKKKLKE-LEKRLEELEERHELYEE----AKAKKEELERLKKRL--TGLTP 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 673 EALQQEHLDLMKQLTLTQEALqsreqsldalqthyDELQARLGELQGEAASREDTIcllqnekIILEAALQAAKSGKEEL 752
Cdd:PRK03918 387 EKLEKELEELEKAKEEIEEEI--------------SKITARIGELKKEIKELKKAI-------EELKKAKGKCPVCGREL 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 753 DRGARrlEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKAT 832
Cdd:PRK03918 446 TEEHR--KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKK 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 833 RKrldsELKELRQELMQVHGEKRTAEAELSRLhrevAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVA--VT 910
Cdd:PRK03918 524 AE----EYEKLKEKLIKLKGEIKSLKKELEKL----EELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEerLK 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 911 EANEALKKQIEELQQEARKAITEQKQKmrRLGSDLTSAQKEMKTKHKAYENavgiLSRRLQEALAAKEAADAElgqlraq 990
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELK--KLEEELDKAFEELAETEKRLEE----LRKELEELEKKYSEEEYE------- 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 991 gGSSDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIAlTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKL 1070
Cdd:PRK03918 663 -ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE-ELEEREKAKKELEKLEKALERVEELREKVKKYKALLKER 740
|
...
gi 1955007402 1071 ALE 1073
Cdd:PRK03918 741 ALS 743
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
357-735 |
5.98e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 5.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 357 ESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALSTK---LQAQVECSHSSQQRQDSLSSEVDTL 433
Cdd:COG4717 96 ELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERleeLEERLEELRELEEELEELEAELAEL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 434 KQscwDLERAMTDLQNMLEaknaslassnNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLE 513
Cdd:COG4717 176 QE---ELEELLEQLSLATE----------EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 514 RT--------------------------TLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQA 567
Cdd:COG4717 243 ERlkearlllliaaallallglggsllsLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELE 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 568 GLLEHLKLENvSLSQQLTETQHRSMKEKGRIAAQLQGIEADmLDQEAAFMQIQE----AKTMVEEDLQRRLEEFEGERER 643
Cdd:COG4717 323 ELLAALGLPP-DLSPEELLELLDRIEELQELLREAEELEEE-LQLEELEQEIAAllaeAGVEDEEELRAALEQAEEYQEL 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 644 LQRMADSAASLEQQL------------EQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQ--SREQSLDALQTHYDE 709
Cdd:COG4717 401 KEELEELEEQLEELLgeleellealdeEELEEELEELEEELEELEEELEELREELAELEAELEqlEEDGELAELLQELEE 480
|
410 420
....*....|....*....|....*.
gi 1955007402 710 LQARLGELQGEAASREDTICLLQNEK 735
Cdd:COG4717 481 LKAELRELAEEWAALKLALELLEEAR 506
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
631-951 |
1.10e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 631 QRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQ----------------EHLDLMKQLTLTQEALQ 694
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEyswdeidvasaereiaELEAELERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 695 SREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLR 774
Cdd:COG4913 689 ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELR 768
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 775 EELaikSGQVEHLQQETAALKKQMQKIKEQFLQQkvmveaYRRDATSKDQLISELKATRKRLD----SELKELRQELMQV 850
Cdd:COG4913 769 ENL---EERIDALRARLNRAEEELERAMRAFNRE------WPAETADLDADLESLPEYLALLDrleeDGLPEYEERFKEL 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 851 hgEKRTAEAEL----SRLHREVAQVRQHMADLEGHLQSAQKERDemeTHLQsLQFDKEQMVAVTEANEALKKQIEELQQE 926
Cdd:COG4913 840 --LNENSIEFVadllSKLRRAIREIKERIDPLNDSLKRIPFGPG---RYLR-LEARPRPDPEVREFRQELRAVTSGASLF 913
|
330 340
....*....|....*....|....*
gi 1955007402 927 ARKAITEQKQKMRRLGSDLTSAQKE 951
Cdd:COG4913 914 DEELSEARFAALKRLIERLRSEEEE 938
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
774-1298 |
1.26e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 774 REELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRD-ATSKDQLISELKAtrkrldsELKELRQELMQVHG 852
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQiRGNGGDRLEQLER-------EIERLERELEERER 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 853 EKRTAEAELSRLH-----------REVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIE 921
Cdd:COG4913 360 RRARLEALLAALGlplpasaeefaALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIP 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 922 ELQQEARKAITEQkqkmrrLGSDLTSAQ-----KEMKTKHKAYENAV----GILSRRL----QEALAAKEAADAELGQLR 988
Cdd:COG4913 440 ARLLALRDALAEA------LGLDEAELPfvgelIEVRPEEERWRGAIervlGGFALTLlvppEHYAAALRWVNRLHLRGR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 989 AQGgssdsslalhERIQALEAELQAVS-HSKTLLEK---ELQEVIALTSQELEESREKVL-ELEDELQESR------GFR 1057
Cdd:COG4913 514 LVY----------ERVRTGLPDPERPRlDPDSLAGKldfKPHPFRAWLEAELGRRFDYVCvDSPEELRRHPraitraGQV 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1058 KKIKRLEESNKKLALELEHEkgkltgLGQSNAALREHnsiLETALAKREADLVQLNLQVQAvLQRKEEEDRQMKHLVQAL 1137
Cdd:COG4913 584 KGNGTRHEKDDRRRIRSRYV------LGFDNRAKLAA---LEAELAELEEELAEAEERLEA-LEAELDALQERREALQRL 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1138 QASLEKEKEkVNSLKEQVAAAKVEaghnRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAE 1217
Cdd:COG4913 654 AEYSWDEID-VASAEREIAELEAE----LERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1218 LAEARAQLQLLQKQLDEQLskqpvgNQEMENLKWEVDQKEREiQSLKQQLdlteqqgRKELEGLQQLLQNVKSELEMAQE 1297
Cdd:COG4913 729 LDELQDRLEAAEDLARLEL------RALLEERFAAALGDAVE-RELRENL-------EERIDALRARLNRAEEELERAMR 794
|
.
gi 1955007402 1298 D 1298
Cdd:COG4913 795 A 795
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
520-1067 |
1.35e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 520 KLKASQAEISSLQSVRQWY--QQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQLTETQHRsmkEKGR 597
Cdd:COG4913 266 AARERLAELEYLRAALRLWfaQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGD---RLEQ 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 598 IAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQvklTLLQRDQQLEALQQ 677
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEE---ALAEAEAALRDLRR 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 678 EHLDLMKQLtltqEALQSREQSLDAlqtHYDELQARLGELQGEAASREDTIC-LLQ----NEK----------------I 736
Cdd:COG4913 420 ELRELEAEI----ASLERRKSNIPA---RLLALRDALAEALGLDEAELPFVGeLIEvrpeEERwrgaiervlggfaltlL 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 737 ILEAALQAAKS------GKEELD-RGARRLEEGTEETSETLEKLREELAIKSGQ--------------------VEHLQQ 789
Cdd:COG4913 493 VPPEHYAAALRwvnrlhLRGRLVyERVRTGLPDPERPRLDPDSLAGKLDFKPHPfrawleaelgrrfdyvcvdsPEELRR 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 790 ETAALKKQMQkIKeqflQQKVMVEAYRRDATSKDQLI-SELKATRKRLDSELKELRQELmqvhgekRTAEAELSRLHREV 868
Cdd:COG4913 573 HPRAITRAGQ-VK----GNGTRHEKDDRRRIRSRYVLgFDNRAKLAALEAELAELEEEL-------AEAEERLEALEAEL 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 869 AQVRQHMADLEGHLQSAQKERD--EMETHLQSLQfdkEQMVAVTEAN---EALKKQIEELQQE---ARKAITEQKQKMRR 940
Cdd:COG4913 641 DALQERREALQRLAEYSWDEIDvaSAEREIAELE---AELERLDASSddlAALEEQLEELEAEleeLEEELDELKGEIGR 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 941 LGSDLTSAQKEMKTKHKAYENAVGIlsrrlqEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAElqavshsktl 1020
Cdd:COG4913 718 LEKELEQAEEELDELQDRLEAAEDL------ARLELRALLEERFAAALGDAVERELRENLEERIDALRAR---------- 781
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1955007402 1021 LEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESN 1067
Cdd:COG4913 782 LNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDG 828
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
325-923 |
1.67e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.92 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 325 LQAAAAEHQDQGQEVNGEVRSRRDSICSSVSlESSAAETQEemLQVLKEKM-RLEGQLEALSLEASQALKEKAE------ 397
Cdd:pfam12128 270 DETLIASRQEERQETSAELNQLLRTLDDQWK-EKRDELNGE--LSAADAAVaKDRSELEALEDQHGAFLDADIEtaaadq 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 398 -----LQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDtlKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQVAEEQY 472
Cdd:pfam12128 347 eqlpsWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK--EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESEL 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 473 ------QRLMAKVEDMQ--------RSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWY 538
Cdd:pfam12128 425 reqleaGKLEFNEEEYRlksrlgelKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQA 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 539 QQQLALAQEARVRLQGEMAHIQVGQMTQAG-LLEHLKLENVSLSQQL-----TETQHRSMKEKGRIAAQLQG---IEADM 609
Cdd:pfam12128 505 SEALRQASRRLEERQSALDELELQLFPQAGtLLHFLRKEAPDWEQSIgkvisPELLHRTDLDPEVWDGSVGGelnLYGVK 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 610 LDQEAafMQIQEAKTMvEEDLQRRLEEFEgerERLQRMADSAASLEQQLEQVKLTLLQRDQQLE----ALQQEHLDLM-- 683
Cdd:pfam12128 585 LDLKR--IDVPEWAAS-EEELRERLDKAE---EALQSAREKQAAAEEQLVQANGELEKASREETfartALKNARLDLRrl 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 684 ------------KQLTLTQEALQSREQSLDALQTHYD-ELQARLGELQGEaaSREDTICLLQNEKII---LEAALQAAKS 747
Cdd:pfam12128 659 fdekqsekdkknKALAERKDSANERLNSLEAQLKQLDkKHQAWLEEQKEQ--KREARTEKQAYWQVVegaLDAQLALLKA 736
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 748 GKEELDRGARRLEEGTEETSETLEKLR----EELAIKSGQVEHLQQETAALKKQMQKIKE--QFLQQKVMVEAYRRDATS 821
Cdd:pfam12128 737 AIAARRSGAKAELKALETWYKRDLASLgvdpDVIAKLKREIRTLERKIERIAVRRQEVLRyfDWYQETWLQRRPRLATQL 816
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 822 KD--QLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSL 899
Cdd:pfam12128 817 SNieRAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSEQAQGSIGERLAQLE 896
|
650 660
....*....|....*....|....
gi 1955007402 900 QFDKEQMVAVteanEALKKQIEEL 923
Cdd:pfam12128 897 DLKLKRDYLS----ESVKKYVEHF 916
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
794-1322 |
1.67e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 794 LKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQ 873
Cdd:TIGR04523 38 LEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKE 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 874 HMADLEGHLQSAQKERDEMETH----LQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKmrrlgsdltsaQ 949
Cdd:TIGR04523 118 QKNKLEVELNKLEKQKKENKKNidkfLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNI-----------Q 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 950 KEMKTKHKAYenavgilsRRLQEALAAKEAADAELGQLRAQggssdsslalherIQALEAELQAVSHSKTLLEKELQEVi 1029
Cdd:TIGR04523 187 KNIDKIKNKL--------LKLELLLSNLKKKIQKNKSLESQ-------------ISELKKQNNQLKDNIEKKQQEINEK- 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1030 altSQELEESREKVLELEDELQE-SRGFRKKIKRLEESNKKLAlelehekgkltglgQSNAALREHNSILETALAKREAD 1108
Cdd:TIGR04523 245 ---TTEISNTQTQLNQLKDEQNKiKKQLSEKQKELEQNNKKIK--------------ELEKQLNQLKSEISDLNNQKEQD 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1109 LvqlNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEH 1188
Cdd:TIGR04523 308 W---NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQ 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1189 LVQKLQAEADDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLD 1268
Cdd:TIGR04523 385 EIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRE 464
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 1269 LTEQQgrkeLEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNMKT 1322
Cdd:TIGR04523 465 SLETQ----LKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKD 514
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
360-990 |
2.10e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 360 AAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALStKLQAQVEcshsSQQRQDSLSSEVDTLKQSCWD 439
Cdd:TIGR00618 234 ALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLE-ETQERIN----RARKAAPLAAHIKAVTQIEQQ 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 440 LERAMTDLQNM------LEAKNASLASSNNDLQVAEEQYQRLMAKvEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLE 513
Cdd:TIGR00618 309 AQRIHTELQSKmrsrakLLMKRAAHVKQQSSIEEQRRLLQTLHSQ-EIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 514 RTTLTSKLKASQAEISSLQSVRqwyQQQLALAQEARVrLQGEMAHIQVGQMTQAGLLEHLKL--ENVSLSQQLTETQHRS 591
Cdd:TIGR00618 388 KTTLTQKLQSLCKELDILQREQ---ATIDTRTSAFRD-LQGQLAHAKKQQELQQRYAELCAAaiTCTAQCEKLEKIHLQE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 592 MKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQ 671
Cdd:TIGR00618 464 SAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETS 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 672 LEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEE 751
Cdd:TIGR00618 544 EEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQP 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 752 ldrgARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETaaLKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKA 831
Cdd:TIGR00618 624 ----EQDLQDVRLHLQQCSQELALKLTALHALQLTLTQER--VREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 832 TRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQvrqhmaDLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTE 911
Cdd:TIGR00618 698 MLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAA------REDALNQSLKELMHQARTVLKARTEAHFNNNEEVT 771
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955007402 912 ANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQ 990
Cdd:TIGR00618 772 AALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ 850
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
823-970 |
2.58e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 50.31 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 823 DQLISELKATRKRLDSELKELRQE-------LMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERD----- 890
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDElaalearLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyealq 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 891 -EMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRR 969
Cdd:COG1579 96 kEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPE 175
|
.
gi 1955007402 970 L 970
Cdd:COG1579 176 L 176
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
812-1386 |
2.66e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 812 VEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTA-EAELSRLHREVAQVRQHMADLEGHLQSAQKERD 890
Cdd:PTZ00121 1226 AEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAiKAEEARKADELKKAEEKKKADEAKKAEEKKKAD 1305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 891 EMETHLQSLQFDKEQMVAVTEAN---EALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILS 967
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKkkaDAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK 1385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 968 RRLQEALAAKEAADAELGQLRAQggssDSSLALHERIQALEAELQA--VSHSKTLLEKELQEVIALTSQELEESREKVLE 1045
Cdd:PTZ00121 1386 KAEEKKKADEAKKKAEEDKKKAD----ELKKAAAAKKKADEAKKKAeeKKKADEAKKKAEEAKKADEAKKKAEEAKKAEE 1461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1046 LEDELQESRGFRKKIKRLEESNKKLALELEHEKGKltglgqsnaalREHNSILETALAKREAD-LVQLNLQVQAVLQRKE 1124
Cdd:PTZ00121 1462 AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAK-----------KKADEAKKAAEAKKKADeAKKAEEAKKADEAKKA 1530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1125 EEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQ-AKEHLVQKLQAEADDLQIR 1203
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEeARIEEVMKLYEEEKKMKAE 1610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1204 EGKHSQE----IAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENL--KWEVDQKEREIQSLKQQLDLTEQQGRKE 1277
Cdd:PTZ00121 1611 EAKKAEEakikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKikAAEEAKKAEEDKKKAEEAKKAEEDEKKA 1690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1278 LEGLQQLLQNVKSELEMAQEDLSMTQKDKfmlQAKVSELKNNMKTLLQQNQQLKLDLRRGAAKTRKEPKGEASSSNPATP 1357
Cdd:PTZ00121 1691 AEALKKEAEEAKKAEELKKKEAEEKKKAE---ELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEE 1767
|
570 580
....*....|....*....|....*....
gi 1955007402 1358 IKIpdcpvpasllEELLRPPPAVSKEPLK 1386
Cdd:PTZ00121 1768 KKA----------EEIRKEKEAVIEEELD 1786
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
996-1223 |
3.05e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 996 SSLALHERIQALEAELQAVSHSKTLLEKELQEV---IALTSQELEESREKVLELEDELQESRG----FRKKIKRLEESNK 1068
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALkkeEKALLKQLAALERRIAALARRIRALEQelaaLEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1069 KLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKV 1148
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955007402 1149 NSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQiregkhsQEIAQFQAELAEARA 1223
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE-------ALIARLEAEAAAAAE 241
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
514-930 |
4.83e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 4.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 514 RTTLTSKLKASQAEISSLQ-SVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKlenvSLSQQLTETQHRSM 592
Cdd:COG4717 44 RAMLLERLEKEADELFKPQgRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELE----ELEAELEELREELE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 593 KEKGRIAAQLQGIEADMLDQEAAFMQIQEaktmveEDLQRRLEEFEGERERLQRMADSAASLEQQLEQ--------VKLT 664
Cdd:COG4717 120 KLEKLLQLLPLYQELEALEAELAELPERL------EELEERLEELRELEEELEELEAELAELQEELEElleqlslaTEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 665 LLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQ---------------ARLGELQGEAASREDTIC 729
Cdd:COG4717 194 LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAleerlkearlllliaAALLALLGLGGSLLSLIL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 730 ------------------LLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQET 791
Cdd:COG4717 274 tiagvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 792 AALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKR--LDSELKELRQELMQVHGEKRT--AEAELSRLHRE 867
Cdd:COG4717 354 REAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYqeLKEELEELEEQLEELLGELEEllEALDEEELEEE 433
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955007402 868 VAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEAnEALKKQIEELQQEARKA 930
Cdd:COG4717 434 LEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQEL-EELKAELRELAEEWAAL 495
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
558-718 |
6.26e-06 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 50.05 E-value: 6.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 558 HIQVGQMTQAG-LLehLKLENVSLSQQLTETQHRsmkekgriAAQLQGIEADMLDQEAAFMQIQEAKTMVEEdLQRRLEE 636
Cdd:COG1566 60 LVKEGDRVKKGqVL--ARLDPTDLQAALAQAEAQ--------LAAAEAQLARLEAELGAEAEIAAAEAQLAA-AQAQLDL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 637 FEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEhLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGE 716
Cdd:COG1566 129 AQRELERYQALYKKGAVSQQELDEARAALDAAQAQLEAAQAQ-LAQAQAGLREEEELAAAQAQVAQAEAALAQAELNLAR 207
|
..
gi 1955007402 717 LQ 718
Cdd:COG1566 208 TT 209
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
351-567 |
6.58e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 6.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 351 CSSVSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEV 430
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 431 DTLKQscwDLERAMTDLQNMLEA--------------KNASLASSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDL 496
Cdd:COG4942 93 AELRA---ELEAQKEELAELLRAlyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 497 RQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQA 567
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
502-747 |
7.24e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 7.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 502 ALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLS 581
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 582 QQLTETQHRsmkekgrIAAQLQGIEADMLDQEAAFMQIQEAKtmveEDLQRRLEEFEGERERLQRMADSAASLEQQLEQV 661
Cdd:COG4942 97 AELEAQKEE-------LAELLRALYRLGRQPPLALLLSPEDF----LDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 662 KLTLLQRDQQLEALQQEHLDLMKQLtltQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTIcllqnEKIILEAA 741
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALI-----ARLEAEAA 237
|
....*.
gi 1955007402 742 LQAAKS 747
Cdd:COG4942 238 AAAERT 243
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1098-1409 |
1.19e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.06 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1098 LETALAKREADLVQLNLQVQAVLQRKE--EEDRQMKHLVQALQaslekekekVNSLKEQVAAAKVEAGHNRRHFKAASLE 1175
Cdd:TIGR02168 191 LEDILNELERQLKSLERQAEKAERYKElkAELRELELALLVLR---------LEELREELEELQEELKEAEEELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1176 LSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELA---EARAQLQLLQKQLDEQLSKQPvgnQEMENLKWE 1252
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQilrERLANLERQLEELEAQLEELE---SKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1253 VDQKEREIQSLKQQLDLTEQQG---RKELEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNmKTLLQQNQQ 1329
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELeelEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEAR-LERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1330 LKLDLRRGAAKTRKEPKGEASSSNPATPIKIPD----CPVPASLLEELLRPPPAVSKEPLKNLNSCLQQLKQEMDSLQRQ 1405
Cdd:TIGR02168 418 RLQQEIEELLKKLEEAELKELQAELEELEEELEelqeELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497
|
....
gi 1955007402 1406 MEEH 1409
Cdd:TIGR02168 498 QENL 501
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
627-1290 |
1.22e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.22 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 627 EEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQrDQQLEALQQEHLDLmkqltlTQEALQSREQSLDA-LQT 705
Cdd:pfam12128 229 DIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHLHFGYKS-DETLIASRQEERQE------TSAELNQLLRTLDDqWKE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 706 HYDELQARLGELQGEAASREDTICLLQNE-KIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKL----REELAIK 780
Cdd:pfam12128 302 KRDELNGELSAADAAVAKDRSELEALEDQhGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHqdvtAKYNRRR 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 781 SGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSK-----DQLISELKATRKRLDSELKELRQELMQVHGE-- 853
Cdd:pfam12128 382 SKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESElreqlEAGKLEFNEEEYRLKSRLGELKLRLNQATATpe 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 854 ----KRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSL-QFDKEQMVAVTEANEALKKQIEELQQEAR 928
Cdd:pfam12128 462 lllqLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQAsRRLEERQSALDELELQLFPQAGTLLHFLR 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 929 KAITEQKQKMRRLGSDL----TSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAElgQLRAQGGSSDSSL-ALHER 1003
Cdd:pfam12128 542 KEAPDWEQSIGKVISPEllhrTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEE--ELRERLDKAEEALqSAREK 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1004 IQALEAELQAVShsKTLLEKELQEVIALTSqeLEESREKVLELEDELQ-ESRGFRKKIKRLEESNKKLALELEHEKgKLT 1082
Cdd:pfam12128 620 QAAAEEQLVQAN--GELEKASREETFARTA--LKNARLDLRRLFDEKQsEKDKKNKALAERKDSANERLNSLEAQL-KQL 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1083 GLGQSNAALREHNSILETALAKREADLV-------QLNLQVQAVLQRKEEEDRQMKHLVQALQASLEK---EKEKVNSLK 1152
Cdd:pfam12128 695 DKKHQAWLEEQKEQKREARTEKQAYWQVvegaldaQLALLKAAIAARRSGAKAELKALETWYKRDLASlgvDPDVIAKLK 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1153 EQVAA--AKVEAGHNRRHfKAASLELSEVKKELQAKEHL---VQKLQAEADDLQIREGKHSQEIAQFQAELAEARAQLQL 1227
Cdd:pfam12128 775 REIRTleRKIERIAVRRQ-EVLRYFDWYQETWLQRRPRLatqLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEK 853
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955007402 1228 LQKQLDEQLSKQPVGNQEMENLK--WEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQLLQNVKS 1290
Cdd:pfam12128 854 QQVRLSENLRGLRCEMSKLATLKedANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKN 918
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
670-1092 |
1.25e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 670 QQLEALQQEhldlMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDticllqneKIILEAALQAAKSGK 749
Cdd:COG4717 71 KELKELEEE----LKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK--------LLQLLPLYQELEALE 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 750 EELDRGARRLEEGTEETSETLEkLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVM-VEAYRRDATSKDQLISE 828
Cdd:COG4717 139 AELAELPERLEELEERLEELRE-LEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEeLEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 829 LKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLhreVAQVRQHMADLEGHLQSAQKERDEMET------HLQSLQFD 902
Cdd:COG4717 218 AQEELEELEEELEQLENELEAAALEERLKEARLLLL---IAAALLALLGLGGSLLSLILTIAGVLFlvlgllALLFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 903 KEQMVAVTEANEA-LKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAAd 981
Cdd:COG4717 295 REKASLGKEAEELqALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA- 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 982 aelgQLRAQGGSSD-----SSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTS-----QELEESREKVLELEDEL- 1050
Cdd:COG4717 374 ----ALLAEAGVEDeeelrAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDeeeleEELEELEEELEELEEELe 449
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1955007402 1051 ---QESRGFRKKIKRLEESNK--KLALELEHEKGKLTGLGQSNAALR 1092
Cdd:COG4717 450 elrEELAELEAELEQLEEDGElaELLQELEELKAELRELAEEWAALK 496
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
338-940 |
1.36e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 49.68 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 338 EVNGEVRSRRDSICSSVSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAqLAALSTKLQAQVEcsh 417
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE-LKEEIEELEKELE--- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 418 ssqqrqdSLSSEVDTLKQSCWDLERAMTDLQ---NMLEAKNASLassnNDLQVAEEQYQRL---MAKVEDMQRSMLSKDN 491
Cdd:PRK03918 249 -------SLEGSKRKLEEKIRELEERIEELKkeiEELEEKVKEL----KELKEKAEEYIKLsefYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 492 TVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARvRLQGEMAHIQVgqmtqagllE 571
Cdd:PRK03918 318 RLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE-RLKKRLTGLTP---------E 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 572 HLKLENVSLSQQLTETQHRSMKEKGRIaAQLQGIEADMldqEAAFMQIQEAKT--------MVEEDLQRRLEEFEGERER 643
Cdd:PRK03918 388 KLEKELEELEKAKEEIEEEISKITARI-GELKKEIKEL---KKAIEELKKAKGkcpvcgreLTEEHRKELLEEYTAELKR 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 644 LQRMADSAASLEQQLEQVKL---TLLQRDQQLEALQQehldLMKQLTLTQEALQSRE-QSLDALQTHYDELQARLGELQG 719
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELReleKVLKKESELIKLKE----LAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 720 EAASREDTI---CLLQNEKIILEAALQAAKSGKEELdrgarrleegteetsetlEKLREELAIKSgqVEHLQQETaalkK 796
Cdd:PRK03918 540 EIKSLKKELeklEELKKKLAELEKKLDELEEELAEL------------------LKELEELGFES--VEELEERL----K 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 797 QMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRL---DSELKELRQELMQVhgEKRTAEAELSRLHREVAQVRQ 873
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELaetEKRLEELRKELEEL--EKKYSEEEYEELREEYLELSR 673
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1955007402 874 HMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELqQEARKAITEQKQKMRR 940
Cdd:PRK03918 674 ELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERV-EELREKVKKYKALLKE 739
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
576-918 |
2.98e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 576 ENVSLSQQLTETQHRSMKEKGRIAAQLQGIEADMLDQEaafmqiqeaKTMVEEDLQRRLEEFEGERERLQRMADSAASLE 655
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQE---------KEEKAREVERRRKLEEAEKARQAEMDRQAAIYA 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 656 QQleqvKLTLLQRDQQLEALQQE----HLDLMKQLTLTQEALQSREqsLDALQTHYDELQARLgeLQGEAASREDTICLL 731
Cdd:pfam17380 338 EQ----ERMAMERERELERIRQEerkrELERIRQEEIAMEISRMRE--LERLQMERQQKNERV--RQELEAARKVKILEE 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 732 QNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALK-KQMQKIKEQflQQKV 810
Cdd:pfam17380 410 ERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKrKKLELEKEK--RDRK 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 811 MVEAYRRDATSKD-----QLISELKATRKRLDSELKElRQELMQVHGEKRTAEAElSRLHREVAQVRQhmadleghLQSA 885
Cdd:pfam17380 488 RAEEQRRKILEKEleerkQAMIEEERKRKLLEKEMEE-RQKAIYEEERRREAEEE-RRKQQEMEERRR--------IQEQ 557
|
330 340 350
....*....|....*....|....*....|...
gi 1955007402 886 QKERDEMETHLQSLQFDKEQMVAVTEANEALKK 918
Cdd:pfam17380 558 MRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
799-952 |
3.00e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 48.24 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 799 QKIKEQFLQQKVMVEAYRRDA-TSKDQLISELKatrkrldSELKELRQELmqvHGEKRTAEAELSRLHRevaQVRQHMAD 877
Cdd:PRK12704 31 AKIKEAEEEAKRILEEAKKEAeAIKKEALLEAK-------EEIHKLRNEF---EKELRERRNELQKLEK---RLLQKEEN 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1955007402 878 LEGHLQSAQKERDEMETHLQSLqfdkeqmvavteanEALKKQIEELQQEARKAITEQKQKMRRLgSDLTSAQ-KEM 952
Cdd:PRK12704 98 LDRKLELLEKREEELEKKEKEL--------------EQKQQELEKKEEELEELIEEQLQELERI-SGLTAEEaKEI 158
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
783-969 |
3.12e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 783 QVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELS 862
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 863 RLHREVAQV--------RQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQM---VAVTEANEALKKQIEELQQEARKAI 931
Cdd:COG4942 101 AQKEELAELlralyrlgRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAeelRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1955007402 932 TEQKQKMRRLGSDLTSAQK---EMKTKHKAYENAVGILSRR 969
Cdd:COG4942 181 AELEEERAALEALKAERQKllaRLEKELAELAAELAELQQE 221
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1034-1317 |
3.39e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 3.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1034 QELEESREKVLELEDELQEsrgFRKKIKRLE------ESNKKLALELEHEKGKLTGLG--QSNAALREHNSILETALAKR 1105
Cdd:COG1196 179 RKLEATEENLERLEDILGE---LERQLEPLErqaekaERYRELKEELKELEAELLLLKlrELEAELEELEAELEELEAEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1106 EADLVQLNlQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQA 1185
Cdd:COG1196 256 EELEAELA-ELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1186 KEHLVQKLQAEADDLQIREgkhsQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQ 1265
Cdd:COG1196 335 LEEELEELEEELEEAEEEL----EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1955007402 1266 QLDLTEQQGRKELEGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELK 1317
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
628-1138 |
3.47e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 48.28 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 628 EDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHY 707
Cdd:pfam10174 268 EDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEV 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 708 DELQARLGELQGEAASREDTICLLQNEKIILEAALQAAksgKEELDRGARRLEEGTEETSETLEKLRE---ELAIKSGQV 784
Cdd:pfam10174 348 DALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDL---KDMLDVKERKINVLQKKIENLQEQLRDkdkQLAGLKERV 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 785 EHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRldsELKELRQELMQVHGEKRTAEAELSRL 864
Cdd:pfam10174 425 KSLQTDSSNTDTALTTLEEALSEKERIIERLKEQREREDRERLEELESLKK---ENKDLKEKVSALQPELTEKESSLIDL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 865 HREVAQVRQHMADLEGHLQS---AQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEA---RKAITEQKQKM 938
Cdd:pfam10174 502 KEHASSLASSGLKKDSKLKSleiAVEQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRLLEQEVaryKEESGKAQAEV 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 939 RRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSslalheriQALEAELQAVSHSK 1018
Cdd:pfam10174 582 ERLLGILREVENEKNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQLLE--------EARRREDNLADNSQ 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1019 TLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKrlEESNKKLALELEHEKGKLTglgqsnAALREHNS-- 1096
Cdd:pfam10174 654 QLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLR--AERRKQLEEILEMKQEALL------AAISEKDAni 725
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 1955007402 1097 -ILETALAKREADlvqlnlqVQAVLQRKEEEDRQMKHLVQALQ 1138
Cdd:pfam10174 726 aLLELSSSKKKKT-------QEEVMALKREKDRLVHQLKQQTQ 761
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
446-953 |
4.24e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 4.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 446 DLQNMLEAKNaSLASSNndLQVAEEQYQRLMAKVED----MQRSMLSKDNTVHDLR-------QQMTALQSQLQQVQLER 514
Cdd:pfam05483 268 DKANQLEEKT-KLQDEN--LKELIEKKDHLTKELEDikmsLQRSMSTQKALEEDLQiatkticQLTEEKEAQMEELNKAK 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 515 TTLTSKLKASQAEISSLQSVRQWYQQQLALAQEARVRLQGEMAH--IQVGQMTQAGLLEHLKLENVSLSQQLTETQHRSM 592
Cdd:pfam05483 345 AAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKksSELEEMTKFKNNKEVELEELKKILAEDEKLLDEK 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 593 KEKGRIAAQLQGIEADML------DQEAAFMQIQ-EAKTMVEEDLQRRLEEF--EGERERLQRMADSAASLEQQLEQVKL 663
Cdd:pfam05483 425 KQFEKIAEELKGKEQELIfllqarEKEIHDLEIQlTAIKTSEEHYLKEVEDLktELEKEKLKNIELTAHCDKLLLENKEL 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 664 TllqrdqqlealqQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEkiiLEAALQ 743
Cdd:pfam05483 505 T------------QEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDE---VKCKLD 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 744 AAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKD 823
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 824 QLISELKATRKRlDSELKELRQELMQVHGEKRTAEA-ELSRLHREVAQVRQH-----MADLEGHLQSAQKERDEMETHLq 897
Cdd:pfam05483 650 QKFEEIIDNYQK-EIEDKKISEEKLLEEVEKAKAIAdEAVKLQKEIDKRCQHkiaemVALMEKHKHQYDKIIEERDSEL- 727
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1955007402 898 SLQFDKEQmvAVTEANEALKKQIEELQQE---ARKAIT---EQKQKMRRLGSDLTSAQKEMK 953
Cdd:pfam05483 728 GLYKNKEQ--EQSSAKAALEIELSNIKAEllsLKKQLEiekEEKEKLKMEAKENTAILKDKK 787
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
571-1161 |
5.16e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 5.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 571 EHLKLENVSLSQQLTETQHRSMKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDLQRRLEEFEG---ERERLQRM 647
Cdd:PTZ00121 1241 EAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKkaeEAKKADEA 1320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 648 ADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDT 727
Cdd:PTZ00121 1321 KKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKA 1400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 728 ICLLQNEKIILEAAlqAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKsgQVEHLQQETAALKKQMQKIKEQFLQ 807
Cdd:PTZ00121 1401 EEDKKKADELKKAA--AAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKK--KAEEAKKAEEAKKKAEEAKKADEAK 1476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 808 QKVMvEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHgEKRTAE----AELSRLHREVAQVRQHMADLEGHLQ 883
Cdd:PTZ00121 1477 KKAE-EAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE-EAKKADeakkAEEAKKADEAKKAEEKKKADELKKA 1554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 884 SAQKERDEMETHLQSLQFDKEQMVAVTEANEAlkKQIEELQQEARKAITEQKQKMR----------RLGSDLTSAQKEMK 953
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEA--KKAEEARIEEVMKLYEEEKKMKaeeakkaeeaKIKAEELKKAEEEK 1632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 954 TKHKAYENAVGILSRRLQEALAAKEAADAELGQLrAQGGSSDSSLAlhERIQALEAELQAVSHSKTLLEKELQEVIALTS 1033
Cdd:PTZ00121 1633 KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE-AKKAEEDKKKA--EEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1034 QELEESReKVLELEDELQESRGFRKKIKRLEESNKKLALEL---EHEKGKLTGLGQSNAALREHNSILETALAKREADlv 1110
Cdd:PTZ00121 1710 KEAEEKK-KAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAkkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD-- 1786
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 1111 qlnlqvQAVLQRKEEEDRQMKHLVQALQASLEKEKEK---VNSLKEQVAAAKVE 1161
Cdd:PTZ00121 1787 ------EEDEKRRMEVDKKIKDIFDNFANIIEGGKEGnlvINDSKEMEDSAIKE 1834
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
813-990 |
8.49e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 8.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 813 EAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEM 892
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 893 ETHLQSL-----------QFDKEQMV----AVTEANEALKKQIEELQQEA------RKAITEQKQKMRRLGSDLTSAQKE 951
Cdd:COG4942 110 LRALYRLgrqpplalllsPEDFLDAVrrlqYLKYLAPARREQAEELRADLaelaalRAELEAERAELEALLAELEEERAA 189
|
170 180 190
....*....|....*....|....*....|....*....
gi 1955007402 952 MKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQ 990
Cdd:COG4942 190 LEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
478-1216 |
8.51e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.42 E-value: 8.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 478 KVEDMQRSmLSKDNTVHD-----LRQQMTALQSQLQQVQLERTTLtsklkasqAEISSLQSVRQwyqqqlalaQEARVRL 552
Cdd:pfam15921 86 QVKDLQRR-LNESNELHEkqkfyLRQSVIDLQTKLQEMQMERDAM--------ADIRRRESQSQ---------EDLRNQL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 553 QGEMAHIQVGQMTQAGLLEhlklenvSLSQQLTETQHRSMKEKGriaaQLQGIEADMLD-QEAAFMQIQEAKTM------ 625
Cdd:pfam15921 148 QNTVHELEAAKCLKEDMLE-------DSNTQIEQLRKMMLSHEG----VLQEIRSILVDfEEASGKKIYEHDSMstmhfr 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 626 -VEEDLQRRLEEFEGErerLQRMADSAASLEQQLEQVKltlLQRDQQLEALQQEHLDLMKQLT---------LTQEALQS 695
Cdd:pfam15921 217 sLGSAISKILRELDTE---ISYLKGRIFPVEDQLEALK---SESQNKIELLLQQHQDRIEQLIseheveitgLTEKASSA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 696 REQS------LDALQT-----------HYDELQARLGELQGE--AASR--EDTICLLQNEKIILEAALQAAKSGKEELDR 754
Cdd:pfam15921 291 RSQAnsiqsqLEIIQEqarnqnsmymrQLSDLESTVSQLRSElrEAKRmyEDKIEELEKQLVLANSELTEARTERDQFSQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 755 GARRLEEGTEETSETLEKLREELAIKSGQ--------------VEHLQQE-----------TAALKKQMQKIKEQFLQQK 809
Cdd:pfam15921 371 ESGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitIDHLRRElddrnmevqrlEALLKAMKSECQGQMERQM 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 810 VMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRT-----------------AEAELSRLHREV---A 869
Cdd:pfam15921 451 AAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTvsdltaslqekeraieaTNAEITKLRSRVdlkL 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 870 QVRQHMADLEGHLQSAQKERDEMethlqslqfdKEQMVAVTEANEALKKQIEELQ----QEARKAITEQKQKmrrlgsdl 945
Cdd:pfam15921 531 QELQHLKNEGDHLRNVQTECEAL----------KLQMAEKDKVIEILRQQIENMTqlvgQHGRTAGAMQVEK-------- 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 946 tsAQKEMKtkhkayenavgILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEKEL 1025
Cdd:pfam15921 593 --AQLEKE-----------INDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLL 659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1026 QEVialtsqelEESREKVLELEDELQE-SRGFRKKIKRLEESNKKLAL-------ELEHEKGKLTGL-GQSNAALREHNS 1096
Cdd:pfam15921 660 NEV--------KTSRNELNSLSEDYEVlKRNFRNKSEEMETTTNKLKMqlksaqsELEQTRNTLKSMeGSDGHAMKVAMG 731
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1097 ILETALAKR-EADLVQLNLQvqaVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAA--AKVEAGHNRRHFKAAS 1173
Cdd:pfam15921 732 MQKQITAKRgQIDALQSKIQ---FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGelEVLRSQERRLKEKVAN 808
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1955007402 1174 LELSEVKKELQAKE--HLVQKLQAEADDLQIregKHSQEIAQFQA 1216
Cdd:pfam15921 809 MEVALDKASLQFAEcqDIIQRQEQESVRLKL---QHTLDVKELQG 850
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
857-1093 |
9.92e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 9.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 857 AEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQfdkEQMVAVTEANEALKKQIEELQQEARKAITEQKQ 936
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALE---RRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 937 kmrrlgsdltsAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQL-RAQGGSSDSSLALHERIQALEAELQAVS 1015
Cdd:COG4942 95 -----------LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAvRRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 1016 HSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALRE 1093
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
635-1078 |
1.02e-04 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 46.60 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 635 EEFEGERERLQRMADSAA---SLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQ 711
Cdd:pfam19220 3 QRNELLRVRLGEMADRLEdlrSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 712 ARLGELQGEAASredticllqnekiiLEAALQAAKSGKEELdrgarrleegteetsetleklREELAIKSGQVEHLQQET 791
Cdd:pfam19220 83 GELEELVARLAK--------------LEAALREAEAAKEEL---------------------RIELRDKTAQAEALERQL 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 792 AALKKQMQKIKEQflqqkvmVEAYRRDATSKDQLISelkatrkRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQV 871
Cdd:pfam19220 128 AAETEQNRALEEE-------NKALREEAQAAEKALQ-------RAEGELATARERLALLEQENRRLQALSEEQAAELAEL 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 872 RQHMADLEGHLQSAQKERDEMETHLqslqfdkeqmVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQK- 950
Cdd:pfam19220 194 TRRLAELETQLDATRARLRALEGQL----------AAEQAERERAEAQLEEAVEAHRAERASLRMKLEALTARAAATEQl 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 951 --EMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQggssdsslalHERIQALEAELQAVSHSKTLLEKELQEV 1028
Cdd:pfam19220 264 laEARNQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEAD----------LERRTQQFQEMQRARAELEERAEMLTKA 333
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 1029 IALTSQELEESREKVLELEDELQE-SRGFRKKIKRLEESNKKLALELEHEK 1078
Cdd:pfam19220 334 LAAKDAALERAEERIASLSDRIAElTKRFEVERAALEQANRRLKEELQRER 384
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
581-804 |
1.06e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 581 SQQLTETQHRSMKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEdLQRRLEEFEGE----RERLQRMADSAASLEQ 656
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA-LARRIRALEQElaalEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 657 QLEQVKLTLlqrDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKI 736
Cdd:COG4942 98 ELEAQKEEL---AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 737 ILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQ 804
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
700-862 |
1.11e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.30 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 700 LDALQTHYDELQARLGELQGEAASredticlLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREEL-- 777
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAE-------LEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgn 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 778 AIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKAT----RKRLDSELKELRQELMQVHGE 853
Cdd:COG1579 85 VRNNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAEleekKAELDEELAELEAELEELEAE 164
|
....*....
gi 1955007402 854 KRTAEAELS 862
Cdd:COG1579 165 REELAAKIP 173
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
579-864 |
1.13e-04 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 46.56 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 579 SLSQQLTETQHRSMKEKG---RIAAQLQgiEADMLDQEAAFMQIQEAktmveEDLQRRLEEFEGERERlqrmadsaasle 655
Cdd:pfam05667 230 GLASRLTPEEYRKRKRTKllkRIAEQLR--SAALAGTEATSGASRSA-----QDLAELLSSFSGSSTT------------ 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 656 qQLEQVKLTLLQRDQQLeALQQEHLDLMKQLTLT----QEALQSREQSLDALQTHYDELQARLGELQGEAASREDTIclL 731
Cdd:pfam05667 291 -DTGLTKGSRFTHTEKL-QFTNEAPAATSSPPTKveteEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESSI--K 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 732 QnekiiLEAALQAAKSGKEELdrgarrleegtEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKV- 810
Cdd:pfam05667 367 Q-----VEEELEELKEQNEEL-----------EKQYKVKKKTLDLLPDAEENIAKLQALVDASAQRLVELAGQWEKHRVp 430
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1955007402 811 MVEAYRRDATSKDQLISElkatRKRLDSELKELRQELMQVHGEKRTAEAELSRL 864
Cdd:pfam05667 431 LIEEYRALKEAKSNKEDE----SQRKLEEIKELREKIKEVAEEAKQKEELYKQL 480
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1003-1220 |
1.29e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.55 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1003 RIQALEAELQAVSHSKTLLE-------KELQEVIALTSQELEESREKVlelEDELQESRGFRKKIKRLEESNKKLALELE 1075
Cdd:PHA02562 175 KIRELNQQIQTLDMKIDHIQqqiktynKNIEEQRKKNGENIARKQNKY---DELVEEAKTIKAEIEELTDELLNLVMDIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1076 HEKGKLTGLGQSNAALREhnsilETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHL---VQALQASLEKEKEKVNSLK 1152
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKS-----KIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIkdkLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 1153 EQVaaakVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAE 1220
Cdd:PHA02562 327 EIM----DEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDK 390
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
784-1408 |
1.56e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 784 VEHLQQETAAlKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLiSELKATRKRLDSELKELRQELmqvhgekrtAEAELSR 863
Cdd:COG4913 231 VEHFDDLERA-HEALEDAREQIELLEPIRELAERYAAARERL-AELEYLRAALRLWFAQRRLEL---------LEAELEE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 864 LHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEqmvavteanEALKKQIEELQQEARK---AITEQKQKMRR 940
Cdd:COG4913 300 LRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRL---------EQLEREIERLERELEErerRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 941 LGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRaqggssdsslalhERIQALEAELQAVSHSKTL 1020
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLR-------------RELRELEAEIASLERRKSN 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1021 LEKELQEVIALTSQELEESREKVL---ELEDELQESRGFRKKIKRL----------EESNKKLALEL---EHEKGKLTGL 1084
Cdd:COG4913 438 IPARLLALRDALAEALGLDEAELPfvgELIEVRPEEERWRGAIERVlggfaltllvPPEHYAAALRWvnrLHLRGRLVYE 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1085 GqsnAALREHNSILETALAKREADLVQLNLQ-----VQAVLQRKE-----EEDRQMKHLVQALQASLekekekvnslkeQ 1154
Cdd:COG4913 518 R---VRTGLPDPERPRLDPDSLAGKLDFKPHpfrawLEAELGRRFdyvcvDSPEELRRHPRAITRAG------------Q 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1155 VAAAKVEAGHNRRHFKAASLEL-SEVKKELQAKEHLVQKLQAEADDLQiregkhsQEIAQFQAELAEARAQLQLLqkqld 1233
Cdd:COG4913 583 VKGNGTRHEKDDRRRIRSRYVLgFDNRAKLAALEAELAELEEELAEAE-------ERLEALEAELDALQERREAL----- 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1234 eqlskqpvgnQEMENLKWE---VDQKEREIQSLKQQLDLTEQqGRKELEGLQQllqnvksELEMAQEDLSMTQKDKFMLQ 1310
Cdd:COG4913 651 ----------QRLAEYSWDeidVASAEREIAELEAELERLDA-SSDDLAALEE-------QLEELEAELEELEEELDELK 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1311 AKVSELKNNMKtllqqnqqlKLDLRRGAAKTRKEPKGEASSSNPATpikipdcpvpasLLEELLR--PPPAVSKEPLKNL 1388
Cdd:COG4913 713 GEIGRLEKELE---------QAEEELDELQDRLEAAEDLARLELRA------------LLEERFAaaLGDAVERELRENL 771
|
650 660
....*....|....*....|
gi 1955007402 1389 NSCLQQLKQEMDSLQRQMEE 1408
Cdd:COG4913 772 EERIDALRARLNRAEEELER 791
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
907-1159 |
1.63e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 907 VAVTEANEALKKQIEELQQEarkaITEQKQKMRRLGSDLTSAQKEMktkhKAYENAVGILSRRLQEALAAKEAADAELGQ 986
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQL----AALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 987 LRAQggssdsslalherIQALEAELQAvshsktlLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEES 1066
Cdd:COG4942 88 LEKE-------------IAELRAELEA-------QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1067 NKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKE 1146
Cdd:COG4942 148 RREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
250
....*....|...
gi 1955007402 1147 KVNSLKEQVAAAK 1159
Cdd:COG4942 228 LIARLEAEAAAAA 240
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
853-1077 |
2.53e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 853 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLqfdkEQMVAVTEAN-EALKKQIEELQQEARKAI 931
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL----ARRIRALEQElAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 932 TEQKQKMRRLGSDLTSAQKEMKTKHKAY---ENAVGILSRRLQEALAAKEAADAELGQLRAQggssdsslalHERIQALE 1008
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRAD----------LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955007402 1009 AELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHE 1077
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1134-1355 |
2.56e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1134 VQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQ 1213
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1214 FQAELAEARAQLQLLQKQLDEQLSKQPVG---NQE--------MENLKWEVDQKEREIQSLKQQLDLTEQQgRKELEGLQ 1282
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLAlllSPEdfldavrrLQYLKYLAPARREQAEELRADLAELAAL-RAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955007402 1283 QLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNMKTLLQQNQQLKLDLRRGAAKTRKEPKGEASSSNPA 1355
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
655-935 |
2.78e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.40 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 655 EQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNE 734
Cdd:TIGR04523 369 QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQ 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 735 KIILEAALQAAKSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEA 814
Cdd:TIGR04523 449 DSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEK 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 815 YRRDATSKDQLISELKATRKRLDSELKELRQElmqvhGEKRTAEAELSRLHREVAQvrqhmadleghLQSAQKERDEMET 894
Cdd:TIGR04523 529 LESEKKEKESKISDLEDELNKDDFELKKENLE-----KEIDEKNKEIEELKQTQKS-----------LKKKQEEKQELID 592
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1955007402 895 HLQSLQFD-KEQMVAVTEANEALKKQIEELQQEARKAITEQK 935
Cdd:TIGR04523 593 QKEKEKKDlIKEIEEKEKKISSLEKELEKAKKENEKLSSIIK 634
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
784-1168 |
2.92e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 784 VEHLQQETAALKKQMQKIKEqflqqkvmvEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSR 863
Cdd:pfam02463 153 ERRLEIEEEAAGSRLKRKKK---------EALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEE 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 864 LHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGS 943
Cdd:pfam02463 224 EYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 944 DLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQggssdsSLALHERIQALEAELQavsHSKTLLEK 1023
Cdd:pfam02463 304 KLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIK------REAEEEEEEELEKLQE---KLEQLEEE 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1024 ELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALA 1103
Cdd:pfam02463 375 LLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELE 454
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955007402 1104 KREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKVEAGHNRRH 1168
Cdd:pfam02463 455 KQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDG 519
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
833-1283 |
2.94e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 2.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 833 RKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAqkerdemETHLQSLQfdkeQMVAVTEA 912
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAA-------SDHLNLVQ----TALRQQEK 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 913 NEALKKQIEEL------QQEARKAITEQKQkMRRLGSDLTSAQ-KEMKTKHKAYENAVGILSRRlqealaakeaadaelg 985
Cdd:COG3096 349 IERYQEDLEELterleeQEEVVEEAAEQLA-EAEARLEAAEEEvDSLKSQLADYQQALDVQQTR---------------- 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 986 qlraqggssdsSLALHERIQALEaELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEE 1065
Cdd:COG3096 412 -----------AIQYQQAVQALE-KARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1066 SNKKLALELEHEkgklTGLGQSNAALREHNSilETALAKREADLVQLNLQVQAVLQRKEEEDRQMKHLVQALQAS----- 1140
Cdd:COG3096 480 LVCKIAGEVERS----QAWQTARELLRRYRS--QQALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQldaae 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1141 -LEKEKEKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREG---KHSQEIAQFQA 1216
Cdd:COG3096 554 eLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGealADSQEVTAAMQ 633
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1955007402 1217 ELAEaraqlqllqkqldeqlskqpvgnqemenlkwevdqKEREIQSLKQQLDLTEQQGRKELEGLQQ 1283
Cdd:COG3096 634 QLLE-----------------------------------REREATVERDELAARKQALESQIERLSQ 665
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
788-1322 |
3.07e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 788 QQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELMQ----VHGEKRTAEAELSR 863
Cdd:TIGR00618 151 QGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCmpdtYHERKQVLEKELKH 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 864 LHREVAQVRQHMADLEgHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEAR-----KAITEQKQKM 938
Cdd:TIGR00618 231 LREALQQTQQSHAYLT-QKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPlaahiKAVTQIEQQA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 939 RRLGSDLTSaQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQAVSHSK 1018
Cdd:TIGR00618 310 QRIHTELQS-KMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1019 TLLEKELQeviaLTSQELEESREKVLELEDELQESRGFRKKIKRLEE----SNKKLALELEHEKGKLTGLGQSNAALREH 1094
Cdd:TIGR00618 389 TTLTQKLQ----SLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKqqelQQRYAELCAAAITCTAQCEKLEKIHLQES 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1095 NSILEtALAKREADLVQLNLQVQ-------AVLQRKEEEDRQMK----HLVQALQAS-------------------LEKE 1144
Cdd:TIGR00618 465 AQSLK-EREQQLQTKEQIHLQETrkkavvlARLLELQEEPCPLCgsciHPNPARQDIdnpgpltrrmqrgeqtyaqLETS 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1145 KEKV----NSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQAEADD----------------LQIRE 1204
Cdd:TIGR00618 544 EEDVyhqlTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKlseaedmlaceqhallRKLQP 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1205 GKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPV-----GNQEMENLKWEVDQ-KEREIQSLKQQLdlteqqgRKEL 1278
Cdd:TIGR00618 624 EQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVrehalSIRVLPKELLASRQlALQKMQSEKEQL-------TYWK 696
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1955007402 1279 EGLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNMKT 1322
Cdd:TIGR00618 697 EMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDA 740
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
614-1003 |
3.09e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 614 AAFMQIQ-EAKTMVEEDLQRRLEEFEG------ERERLQRMADSAASLEQqleqvkltllqRDQQLEALQQ---EHLDLM 683
Cdd:COG3096 271 ADYMRHAnERRELSERALELRRELFGArrqlaeEQYRLVEMARELEELSA-----------RESDLEQDYQaasDHLNLV 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 684 KQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGA------- 756
Cdd:COG3096 340 QTALRQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAiqyqqav 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 757 ---RRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQM---QKIKEQF-----LQQKVMVEAYRRDATSK-DQ 824
Cdd:COG3096 420 qalEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLsvaDAARRQFekayeLVCKIAGEVERSQAWQTaRE 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 825 LISE------LKATRKRLDSELKELRQELMQvhgeKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQS 898
Cdd:COG3096 500 LLRRyrsqqaLAQRLQQLRAQLAELEQRLRQ----QQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAE 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 899 LQfdkEQMVAVTEANEALKKQIEELQQEARKAITEQkQKMRRL----GSDLTSAQKEMKTKHKAYENAVGILSRRLQEAL 974
Cdd:COG3096 576 AV---EQRSELRQQLEQLRARIKELAARAPAWLAAQ-DALERLreqsGEALADSQEVTAAMQQLLEREREATVERDELAA 651
|
410 420 430
....*....|....*....|....*....|
gi 1955007402 975 AAKEAADAELgQLRAQGGSSDSSL-ALHER 1003
Cdd:COG3096 652 RKQALESQIE-RLSQPGGAEDPRLlALAER 680
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1000-1282 |
4.47e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.05 E-value: 4.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1000 LHERIQALEAELQAvshsktllEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKG 1079
Cdd:PRK03918 174 IKRRIERLEKFIKR--------TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEK 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1080 KLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAV--LQRKEEEDRQMKHLVQALQ---ASLEKEKEKVNSLKEQ 1154
Cdd:PRK03918 246 ELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELkeLKEKAEEYIKLSEFYEEYLdelREIEKRLSRLEEEING 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1155 VAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQKLQaEADDLQIREGKHSQEIAQFQAELAEARAqlqllqkqlde 1234
Cdd:PRK03918 326 IEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYE-EAKAKKEELERLKKRLTGLTPEKLEKEL----------- 393
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1955007402 1235 qlskqpvgnQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQ 1282
Cdd:PRK03918 394 ---------EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELK 432
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
833-1205 |
4.58e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 833 RKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQslQFDKEQM--VAVT 910
Cdd:PRK04863 281 RRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALR--QQEKIERyqADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 911 EANEALkkqieELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRR-LQEALAAKEAAdaelgqlRA 989
Cdd:PRK04863 359 ELEERL-----EEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRaIQYQQAVQALE-------RA 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 990 QGGSSDSSLALH---ERIQALEAELQAVSHSKTLLEKELQEVIALTSQeLEESREKVLELEDELQESRG---FRKKIKRL 1063
Cdd:PRK04863 427 KQLCGLPDLTADnaeDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQ-FEQAYQLVRKIAGEVSRSEAwdvARELLRRL 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1064 EESnKKLALELEHEKGKLTGLGQS-------NAALREHN----------SILETALAKREADLVQLNLQVQAVLQRKEEE 1126
Cdd:PRK04863 506 REQ-RHLAEQLQQLRMRLSELEQRlrqqqraERLLAEFCkrlgknlddeDELEQLQEELEARLESLSESVSEARERRMAL 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1127 DRQMKHLvQALQASLEKE-------KEKVNSLKEQVAAAkVEAGHNRRHFKAASLE----LSEVKKELQAKEhlvQKLQA 1195
Cdd:PRK04863 585 RQQLEQL-QARIQRLAARapawlaaQDALARLREQSGEE-FEDSQDVTEYMQQLLErereLTVERDELAARK---QALDE 659
|
410
....*....|
gi 1955007402 1196 EADDLQIREG 1205
Cdd:PRK04863 660 EIERLSQPGG 669
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
628-965 |
4.66e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 628 EDLQRRLEEFEGERERLQRMADSAASL-------------EQQLEQVKLTLLQRDQQLEALQQEHLDLMKQLTLTQEALQ 694
Cdd:PRK04863 796 EELAERYATLSFDVQKLQRLHQAFSRFigshlavafeadpEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLS 875
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 695 SREQSLDALQTHYDE-LQARLGELQGEaasredticllqnekiiLEAALQAAKSgkeeldrgARRLEEGTEETSETLEKL 773
Cdd:PRK04863 876 ALNRLLPRLNLLADEtLADRVEEIREQ-----------------LDEAEEAKRF--------VQQHGNALAQLEPIVSVL 930
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 774 REELAiksgQVEHLQQETAALKKQMQKIKEQFLQQKVMVEayRRDATSKDQLISELKAtrkrlDSELKE-LRQELMQVHG 852
Cdd:PRK04863 931 QSDPE----QFEQLKQDYQQAQQTQRDAKQQAFALTEVVQ--RRAHFSYEDAAEMLAK-----NSDLNEkLRQRLEQAEQ 999
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 853 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFdkeqmVAVTEANEALKKQIEELQQEAR---- 928
Cdd:PRK04863 1000 ERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGV-----PADSGAEERARARRDELHARLSanrs 1074
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1955007402 929 ------KAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGI 965
Cdd:PRK04863 1075 rrnqleKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAG 1117
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
327-598 |
5.49e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.52 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 327 AAAAEHQDQGQEvnGEVRSRRDSICSSVSLESSAAETQ---EEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLA 403
Cdd:PRK11281 27 ARAASNGDLPTE--ADVQAQLDALNKQKLLEAEDKLVQqdlEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 404 ALSTKLQAQVecshssQQRQDSLSseVDTLKQSCWDLERAMTDLQNMLEAKNASLASsnndLQVAEEQYQRLMAkvEDMQ 483
Cdd:PRK11281 105 ALKDDNDEET------RETLSTLS--LRQLESRLAQTLDQLQNAQNDLAEYNSQLVS----LQTQPERAQAALY--ANSQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 484 RSM----------LSKDNTVHDLRQQMTALQSQLQQVQLERTTLTsklkasqAEISSLQSVrqwYQQQLALAQEARVRLQ 553
Cdd:PRK11281 171 RLQqirnllkggkVGGKALRPSQRVLLQAEQALLNAQNDLQRKSL-------EGNTQLQDL---LQKQRDYLTARIQRLE 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1955007402 554 GEMAHIQvgqmtqagllEHLKLENVSLSQQlTETQHRSMKEKGRI 598
Cdd:PRK11281 241 HQLQLLQ----------EAINSKRLTLSEK-TVQEAQSQDEAARI 274
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
821-1316 |
6.10e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 6.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 821 SKDQLISELKATRKRLDSELKELRQELmqvhGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMEtHLQSLQ 900
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEEL----KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLE-KLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 901 FDKEQMVAVTEANEALKKQIEELQQEaRKAITEQKQKMRRLGSDLTSAQKEMKTKHKayenavgilsrrlqealaakeaa 980
Cdd:COG4717 129 PLYQELEALEAELAELPERLEELEER-LEELRELEEELEELEAELAELQEELEELLE----------------------- 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 981 daelgqlraqggssDSSLALHERIQALEAELQAVSHSKTLLEKELQEVialtSQELEESREKVLELEDELQESRgFRKKI 1060
Cdd:COG4717 185 --------------QLSLATEEELQDLAEELEELQQRLAELEEELEEA----QEELEELEEELEQLENELEAAA-LEERL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1061 KRLEESNKKLALELEhekgkLTGLGQSNAALREHN-----------SILETALAKREADLVQLNLQVQAVLQRKEEEDRQ 1129
Cdd:COG4717 246 KEARLLLLIAAALLA-----LLGLGGSLLSLILTIagvlflvlgllALLFLLLAREKASLGKEAEELQALPALEELEEEE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1130 MKHLVQALQASLEKEKEKVNSLKEQVAAAKveaghnrrhfkAASLELSEVKKELQakehlVQKLQAEADDLQIREGKHSQ 1209
Cdd:COG4717 321 LEELLAALGLPPDLSPEELLELLDRIEELQ-----------ELLREAEELEEELQ-----LEELEQEIAALLAEAGVEDE 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1210 EIAQFQAELAEARAQLQLLQKQLDEQLSKQPvGNQEMENLKWEVDQKEREIQSLKQQLDLTEqqgrKELEGLQQLLQNVK 1289
Cdd:COG4717 385 EELRAALEQAEEYQELKEELEELEEQLEELL-GELEELLEALDEEELEEELEELEEELEELE----EELEELREELAELE 459
|
490 500
....*....|....*....|....*....
gi 1955007402 1290 SELEMAQED--LSMTQKDKFMLQAKVSEL 1316
Cdd:COG4717 460 AELEQLEEDgeLAELLQELEELKAELREL 488
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
542-758 |
6.35e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 6.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 542 LALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQLTETQhrsmKEKGRIAAQLQGIEADMLDQEAAFMQIQE 621
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALE----RRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 622 AKTMVEEDLQRRLEEFEGERERLQRM-----------ADSAASLEQQLEQVKLTLLQRDQQLEALQQEhldlMKQLTLTQ 690
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRAD----LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 691 EALQSREQSLDALQthyDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGARR 758
Cdd:COG4942 167 AELEAERAELEALL---AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
783-941 |
9.14e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 9.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 783 QVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQ-------ELMQVHGEKr 855
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEArikkyeeQLGNVRNNK- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 856 taeaELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQfdkeqmvavtEANEALKKQIEELQQEARKAITEQK 935
Cdd:COG1579 90 ----EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELE----------AELAELEAELEEKKAELDEELAELE 155
|
....*.
gi 1955007402 936 QKMRRL 941
Cdd:COG1579 156 AELEEL 161
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
795-968 |
1.02e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 795 KKQMQKIKEQFLQQK----VMVEAY-------RRDATSKD--QLISELKATRKRLDSELKELRQELMQVHGEKRTAEAEL 861
Cdd:TIGR01612 1506 AKAIEKNKELFEQYKkdvtELLNKYsalaiknKFAKTKKDseIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDA 1585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 862 S---RLHREVAQVRQHMADLEGHL----------QSAQKERDEMETHLQSLQFDKE--QMVAVTEANEALKKQIEELQQE 926
Cdd:TIGR01612 1586 AkndKSNKAAIDIQLSLENFENKFlkisdikkkiNDCLKETESIEKKISSFSIDSQdtELKENGDNLNSLQEFLESLKDQ 1665
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1955007402 927 aRKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYEnaVGILSR 968
Cdd:TIGR01612 1666 -KKNIEDKKKELDELDSEIEKIEIDVDQHKKNYE--IGIIEK 1704
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
353-484 |
1.04e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.03 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 353 SVSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAAlstklQAQVecSHSSQQRQDSLSSEVDT 432
Cdd:PRK09039 76 NQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDS-----EKQV--SARALAQVELLNQQIAA 148
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1955007402 433 LKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQVAeeqyqrLMAKVEDMQR 484
Cdd:PRK09039 149 LRRQLAALEAALDASEKRDRESQAKIADLGRRLNVA------LAQRVQELNR 194
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
354-1221 |
1.31e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 43.24 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 354 VSLESSAAETQEEMLQVLKEKMRLEGQLEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDTL 433
Cdd:pfam01576 225 AELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 434 KqscwdleramTDLQNMLEAKNAslassNNDLQVAEEQYQRLMAKVedMQRSMLSKDNTVHDLRQQMTALQSqlqqvqle 513
Cdd:pfam01576 305 K----------TELEDTLDTTAA-----QQELRSKREQEVTELKKA--LEEETRSHEAQLQEMRQKHTQALE-------- 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 514 rtTLTSKLKASQAEISSLQSVRQwyqqqlALAQEaRVRLQGEMAhiqvgqmtqagllehlklenvSLSQQLTETQHRsmk 593
Cdd:pfam01576 360 --ELTEQLEQAKRNKANLEKAKQ------ALESE-NAELQAELR---------------------TLQQAKQDSEHK--- 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 594 eKGRIAAQLQGIEADMLDQEAAFMQIQE--AKTMVE-EDLQRRLEEFEGERERLQRmadSAASLEQQLEQVKLTLLQRDQ 670
Cdd:pfam01576 407 -RKKLEGQLQELQARLSESERQRAELAEklSKLQSElESVSSLLNEAEGKNIKLSK---DVSSLESQLQDTQELLQEETR 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 671 Q-------LEALQQEHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQ 743
Cdd:pfam01576 483 QklnlstrLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 744 AAKSGKEELDRGARRleegteetsetlekLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRD----- 818
Cdd:pfam01576 563 EKAAAYDKLEKTKNR--------------LQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEErdrae 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 819 ---------ATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTA-----EAELSR--LHREVAQVRQHMADLEGHL 882
Cdd:pfam01576 629 aeareketrALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVgknvhELERSKraLEQQVEEMKTQLEELEDEL 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 883 QSAQKERDEMETHLQSL--QFDKEqMVAVTEANE----ALKKQIEELQ---QEARKAITEQKQKMRRLGSDLTSAQKEMK 953
Cdd:pfam01576 709 QATEDAKLRLEVNMQALkaQFERD-LQARDEQGEekrrQLVKQVRELEaelEDERKQRAQAVAAKKKLELDLKELEAQID 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 954 TKHKAYENAVGILsRRLQEALAAKEAADAELGQLRAQGGSsdSSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTS 1033
Cdd:pfam01576 788 AANKGREEAVKQL-KKLQAQMKDLQRELEEARASRDEILA--QSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERD 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1034 QELEESREKVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLN 1113
Cdd:pfam01576 865 ELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLE 944
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1114 LQVQAVLQRKEEEDRQMKHLVQALQASLEKekeKVNSLKEQVAAAKVEAGHNRRHFKAASLELSEVKKELQAKEHLVQ-- 1191
Cdd:pfam01576 945 RQNKELKAKLQEMEGTVKSKFKSSIAALEA---KIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADqy 1021
|
890 900 910
....*....|....*....|....*....|
gi 1955007402 1192 KLQAEADDLQIREGKHSQEIAQFQAELAEA 1221
Cdd:pfam01576 1022 KDQAEKGNSRMKQLKRQLEEAEEEASRANA 1051
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
447-724 |
1.47e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 447 LQNMLEAKNASLASSNNDLqvaEEQYQRLMAKVEDMQRSmlskdntVHDLRQQ--MTALQSQLQQVQLERTTLTSKLKAS 524
Cdd:COG3206 162 LEQNLELRREEARKALEFL---EEQLPELRKELEEAEAA-------LEEFRQKngLVDLSEEAKLLLQQLSELESQLAEA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 525 QAEISSLQSVRQWYQQQLALAQEARVRLQGEmahiQVGQMTQAGLLEhLKLENVSLSQQLTEtQHRSMKEkgriaaqlqg 604
Cdd:COG3206 232 RAELAEAEARLAALRAQLGSGPDALPELLQS----PVIQQLRAQLAE-LEAELAELSARYTP-NHPDVIA---------- 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 605 ieadmLDQeaafmQIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEhldlmk 684
Cdd:COG3206 296 -----LRA-----QIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLERE------ 359
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1955007402 685 qltltqealqsreqsLDALQTHYDELQARLGELQGEAASR 724
Cdd:COG3206 360 ---------------VEVARELYESLLQRLEEARLAEALT 384
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
383-950 |
1.67e-03 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 42.82 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 383 ALSLEASQALKEKAELQA----QLAALSTKLQAQVECSHSSQQRQDSLSSEVDTLKqscwdleRAMTDLQNMLEAKNASL 458
Cdd:pfam07111 52 SLELEGSQALSQQAELISrqlqELRRLEEEVRLLRETSLQQKMRLEAQAMELDALA-------VAEKAGQAEAEGLRAAL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 459 ASSNNDLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHDlrqqmtalqsqlqqvqLERTTLTSKLKASQAEISSLQSVRQWY 538
Cdd:pfam07111 125 AGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHE----------------EALSSLTSKAEGLEKSLNSLETKRAGE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 539 QQQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKlenVSLSQQLTETQHRSM--KEKGRIAAQLQGIEADMLDqeaaf 616
Cdd:pfam07111 189 AKQLAEAQKEAELLRKQLSKTQEELEAQVTLVESLR---KYVGEQVPPEVHSQTweLERQELLDTMQHLQEDRAD----- 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 617 mqIQEAKTMVEEDLQRRLEEFEGERERLQRMADSAASLEQQLEQVKLTLLQRDQ--------QLEALQQEHLDLMKQltl 688
Cdd:pfam07111 261 --LQATVELLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFPKKCRSLLNRWRekvfalmvQLKAQDLEHRDSVKQ--- 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 689 tqealqsreqsldalqthydelqarlgeLQGEAASREDTICLLQNEKIILEAALQaAKSGKEELDRgarrleegteetse 768
Cdd:pfam07111 336 ----------------------------LRGQVAELQEQVTSQSQEQAILQRALQ-DKAAEVEVER-------------- 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 769 tleklreeLAIKSGQVEhLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQELM 848
Cdd:pfam07111 373 --------MSAKGLQME-LSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVR 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 849 QVHGEKRTAEAELSrlhreVAQVRQHM-----------ADLEGHLQSAQKERDEMETHLQ-SLQFDKEQMVAVTEANEAL 916
Cdd:pfam07111 444 KVHTIKGLMARKVA-----LAQLRQEScpppppappvdADLSLELEQLREERNRLDAELQlSAHLIQQEVGRAREQGEAE 518
|
570 580 590
....*....|....*....|....*....|....
gi 1955007402 917 KKQIEELQQEARKAITEQKQKMRRLGSDLTSAQK 950
Cdd:pfam07111 519 RQQLSEVAQQLEQELQRAQESLASVGQQLEVARQ 552
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
633-963 |
1.76e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 633 RLEEFEGERERL-QRMADSAAS------LEQQLEQVKLTLLQ------RDQQLEALQQEHLDLMKQLTLTQEALQSREQS 699
Cdd:COG3096 786 RLEELRAERDELaEQYAKASFDvqklqrLHQAFSQFVGGHLAvafapdPEAELAALRQRRSELERELAQHRAQEQQLRQQ 865
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 700 LDALQthydELQARLGELQGEAASREDTIclLQNEKIILEAALQAAKSGKEELDRGARRLEEGTEETSEtlekLREELAi 779
Cdd:COG3096 866 LDQLK----EQLQLLNKLLPQANLLADET--LADRLEELREELDAAQEAQAFIQQHGKALAQLEPLVAV----LQSDPE- 934
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 780 ksgQVEHLQQETAALKKQMQKIKEQFLQQKVMVEayRRDATSKDQLISELKATrkrldSELKE-LRQELMQVHGEKRTAE 858
Cdd:COG3096 935 ---QFEQLQADYLQAKEQQRRLKQQIFALSEVVQ--RRPHFSYEDAVGLLGEN-----SDLNEkLRARLEQAEEARREAR 1004
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 859 AELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLqfdkeQMVAVTEANEALKKQIEELQQEAR---------- 928
Cdd:COG3096 1005 EQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEEL-----GVQADAEAEERARIRRDELHEELSqnrsrrsqle 1079
|
330 340 350
....*....|....*....|....*....|....*
gi 1955007402 929 KAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAV 963
Cdd:COG3096 1080 KQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAK 1114
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1149-1293 |
2.07e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1149 NSLKEQVAAAKVEAghnRRHFKAASLELSEVKKE--LQAKEHlVQKLQAEAD-DLQIREgkhsQEIAQFQAELAEARAQL 1225
Cdd:PRK12704 27 KIAEAKIKEAEEEA---KRILEEAKKEAEAIKKEalLEAKEE-IHKLRNEFEkELRERR----NELQKLEKRLLQKEENL 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1955007402 1226 QLLQKQLDEQlskqpvgNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELE---GL------QQLLQNVKSELE 1293
Cdd:PRK12704 99 DRKLELLEKR-------EEELEKKEKELEQKQQELEKKEEELEELIEEQLQELErisGLtaeeakEILLEKVEEEAR 168
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
838-1054 |
2.15e-03 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 41.83 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 838 SELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKE-----RDEMETHLQSLQFDKeQMVAVTEA 912
Cdd:pfam00038 54 KEIEDLRRQLDTLTVERARLQLELDNLRLAAEDFRQKYEDELNLRTSAENDlvglrKDLDEATLARVDLEA-KIESLKEE 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 913 NEALKKQIEELQQEARKAITEQKQKMRR---LGSDLTSAQKEMKTKHKAyenavgiLSRRLQEALAAKEAADAELGQLRA 989
Cdd:pfam00038 133 LAFLKKNHEEEVRELQAQVSDTQVNVEMdaaRKLDLTSALAEIRAQYEE-------IAAKNREEAEEWYQSKLEELQQAA 205
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955007402 990 QGGSSDSSLALHE------RIQALEAELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESR 1054
Cdd:pfam00038 206 ARNGDALRSAKEEitelrrTIQSLEIELQSLKKQKASLERQLAETEERYELQLADYQELISELEAELQETR 276
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
835-971 |
2.49e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 835 RLDSELKELRQELmqvhgekRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQF----DKEQMVAVT 910
Cdd:COG1579 14 ELDSELDRLEHRL-------KELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEArikkYEEQLGNVR 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955007402 911 ------------EANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQ 971
Cdd:COG1579 87 nnkeyealqkeiESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELE 159
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1172-1303 |
2.63e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.57 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1172 ASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKhSQEIAQFQAEL--AEARAQLQLLQKQLDEQLSKQPVGNQ-EMEN 1248
Cdd:COG1566 74 ARLDPTDLQAALAQAEAQLAAAEAQLARLEAELGA-EAEIAAAEAQLaaAQAQLDLAQRELERYQALYKKGAVSQqELDE 152
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1955007402 1249 LKWEVDQKEREIQSLKQQLDLTEQQ--GRKELEGLQQLLQNVKSELEMAQEDLSMTQ 1303
Cdd:COG1566 153 ARAALDAAQAQLEAAQAQLAQAQAGlrEEEELAAAQAQVAQAEAALAQAELNLARTT 209
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1121-1321 |
2.67e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1121 QRKEEEDRQMKHLVQAL---QASLEKEKEKVNSLKEQVAAAKveaghnrrHFKAASLELSEVKKELQAKEhlVQKLQAEA 1197
Cdd:TIGR02168 172 ERRKETERKLERTRENLdrlEDILNELERQLKSLERQAEKAE--------RYKELKAELRELELALLVLR--LEELREEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1198 DDLQIREGKHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLdlteQQGRKE 1277
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERL----ANLERQ 317
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1955007402 1278 LEGLQQLLQNVKSELEMAQEDLSMtqkdkfmLQAKVSELKNNMK 1321
Cdd:TIGR02168 318 LEELEAQLEELESKLDELAEELAE-------LEEKLEELKEELE 354
|
|
| ATG16 |
pfam08614 |
Autophagy protein 16 (ATG16); Autophagy is a ubiquitous intracellular degradation system for ... |
377-475 |
3.45e-03 |
|
Autophagy protein 16 (ATG16); Autophagy is a ubiquitous intracellular degradation system for eukaryotic cells. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. ATG16 (also known as Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway.
Pssm-ID: 462536 [Multi-domain] Cd Length: 176 Bit Score: 39.92 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 377 LEGQLEALSLEASQALKEKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDTLKQSCWDLERAMTDLQNMLEAKNA 456
Cdd:pfam08614 55 LEQLLAQLREELAELYRSRGELAQRLVDLNEELQELEKKLREDERRLAALEAERAQLEEKLKDREEELREKRKLNQDLQD 134
|
90
....*....|....*....
gi 1955007402 457 SLASSNNDLQVAEEQYQRL 475
Cdd:pfam08614 135 ELVALQLQLNMAEEKLRKL 153
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1033-1293 |
3.95e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.48 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1033 SQELEESREKVLELEDELQES--RGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNSILE-TALAKREADL 1109
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEklGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEqLAAAEAEQEL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1110 VQLNLQVQAVLQRKEEEDRQmkhLVQALQASLEKEKEKVNSLKEQVAAAKVEAghnrrHFKAASLELSEVKKEL-QAKEH 1188
Cdd:COG5185 328 EESKRETETGIQNLTAEIEQ---GQESLTENLEAIKEEIENIVGEVELSKSSE-----ELDSFKDTIESTKESLdEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1189 LVQKLQAEADDLQIREGKHSQEIAQFQAELAEAR-----AQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSL 1263
Cdd:COG5185 400 QRGYAQEILATLEDTLKAADRQIEELQRQIEQATssneeVSKLLNELISELNKVMREADEESQSRLEEAYDEINRSVRSK 479
|
250 260 270
....*....|....*....|....*....|
gi 1955007402 1264 KQQLDLTEQQGRKELEGLQQLLQNVKSELE 1293
Cdd:COG5185 480 KEDLNEELTQIESRVSTLKATLEKLRAKLE 509
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
787-1316 |
4.32e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.63 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 787 LQQETAALKKQMqKIKEQFLQQKVMVEAYRRDATSKDQLIS-------ELKATRKRLDSELKELRQELMQVHGEKRTAEA 859
Cdd:pfam05483 204 VQAENARLEMHF-KLKEDHEKIQHLEEEYKKEINDKEKQVSllliqitEKENKMKDLTFLLEESRDKANQLEEKTKLQDE 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 860 ELSRLHREVAQVRQHMADLEGHLQSAQKERDEMEthlQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMR 939
Cdd:pfam05483 283 NLKELIEKKDHLTKELEDIKMSLQRSMSTQKALE---EDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTC 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 940 RLGSDLTSAQKEMKTKhkayENAVGILSRRLQEALAakeaadaelgQLRAQGGSSDSSLALHERIQALEAELQAVSHSKT 1019
Cdd:pfam05483 360 SLEELLRTEQQRLEKN----EDQLKIITMELQKKSS----------ELEEMTKFKNNKEVELEELKKILAEDEKLLDEKK 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1020 LLEKeLQEVIALTSQELE---ESREKvlELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTGLGQSNAALREHNS 1096
Cdd:pfam05483 426 QFEK-IAEELKGKEQELIfllQAREK--EIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENK 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1097 iletALAKREADLV-QLNLQVQAVLQRKEEEDRQMKHL--VQALQASLEKEKEKV-NSLKEQVAAAKVEAGHNRRHFKAA 1172
Cdd:pfam05483 503 ----ELTQEASDMTlELKKHQEDIINCKKQEERMLKQIenLEEKEMNLRDELESVrEEFIQKGDEVKCKLDKSEENARSI 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1173 SLELSEVKKELQAKEHLVQKLQAEADDlqirEGKHSQEIAQFQAELAEaraqlqllqkqldeqlsKQPVGNQEMENLKWE 1252
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIEN----KNKNIEELHQENKALKK-----------------KGSAENKQLNAYEIK 637
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955007402 1253 VDQKEREIQSLKQQLDLTEQQGRKELE----GLQQLLQNVKSELEMAQEDLSMTQKDKFMLQAKVSEL 1316
Cdd:pfam05483 638 VNKLELELASAKQKFEEIIDNYQKEIEdkkiSEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEM 705
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
783-971 |
5.04e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 783 QVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDatskdQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELS 862
Cdd:COG3206 169 RREEARKALEFLEEQLPELRKELEEAEAALEEFRQK-----NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 863 RLHREVAQVRQHMADLEGH--LQSAQKERDEMETHLQSLQfdkeqmVAVTEAN---EALKKQIEELQQEARKAITEQKQK 937
Cdd:COG3206 244 ALRAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELS------ARYTPNHpdvIALRAQIAALRAQLQQEAQRILAS 317
|
170 180 190
....*....|....*....|....*....|....
gi 1955007402 938 MRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQ 971
Cdd:COG3206 318 LEAELEALQAREASLQAQLAQLEARLAELPELEA 351
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
773-925 |
5.19e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 40.72 E-value: 5.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 773 LREELAIKSGQVEHLQQETAALKKQ--MQKIKEQFLQQKVMVEAYRRDATSKDQ-----LISELKATRKRLDSELKELRQ 845
Cdd:PRK09039 44 LSREISGKDSALDRLNSQIAELADLlsLERQGNQDLQDSVANLRASLSAAEAERsrlqaLLAELAGAGAAAEGRAGELAQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 846 ELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQfdkeqmvavTEANEALKKQIEELQQ 925
Cdd:PRK09039 124 ELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLG---------RRLNVALAQRVQELNR 194
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
608-718 |
6.05e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 608 DMLDQEAAFMQIqEAKTMVEE--DLQRRLEEFEGERERLQRMADS-----AASLEQQLEQVKltllqrdQQLEALQ---Q 677
Cdd:COG0542 393 DLIDEAAARVRM-EIDSKPEEldELERRLEQLEIEKEALKKEQDEasferLAELRDELAELE-------EELEALKarwE 464
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1955007402 678 EHLDLMKQLTLTQEALQSREQSLDALQTHYDELQARLGELQ 718
Cdd:COG0542 465 AEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAELA 505
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
773-1303 |
7.16e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.96 E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 773 LREELAIKSGQVEHLQQETAALKKQMQKIKE------QFLQQKVMVEAYRRDATSKDQLISELKATRKRLDSELKELRQE 846
Cdd:pfam10174 183 RTRRIAEAEMQLGHLEVLLDQKEKENIHLREelhrrnQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTN 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 847 LMqVHGEKRTAEA---ELSRLH-----REVAQVRQHMADLEGHLQSAQKERDEM-------ETHLQSLQFD---KEQMVA 908
Cdd:pfam10174 263 GL-LHTEDREEEIkqmEVYKSHskfmkNKIDQLKQELSKKESELLALQTKLETLtnqnsdcKQHIEVLKESltaKEQRAA 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 909 VTEAN-EALKKQIEELQQEARKAiTEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAakeaadaelgQL 987
Cdd:pfam10174 342 ILQTEvDALRLRLEEKESFLNKK-TKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQE----------QL 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 988 RAQGGSSDSslaLHERIQALEAELQAVSHSKTLLEKELQE----VIALTSQELEESREKVLELEDelqesrgFRKKIKRL 1063
Cdd:pfam10174 411 RDKDKQLAG---LKERVKSLQTDSSNTDTALTTLEEALSEkeriIERLKEQREREDRERLEELES-------LKKENKDL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1064 EEsnkklalELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQavlQRKEEEDRQMKHLVQALQASLEK 1143
Cdd:pfam10174 481 KE-------KVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVE---QKKEECSKLENQLKKAHNAEEAV 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1144 EK-----EKVNSLKEQVAAAKVEAGHNRrhfkaASLE-LSEVKKELQAKEHLVQKLQAEADDLQIREGK-HSQEIAQFQA 1216
Cdd:pfam10174 551 RTnpeinDRIRLLEQEVARYKEESGKAQ-----AEVErLLGILREVENEKNDKDKKIAELESLTLRQMKeQNKKVANIKH 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1217 elaearaqlqllqkqldeqlskqpvGNQEMENLKWEVDQKEReiqslKQQLDLTEQQGRKELEGLQQLLQNVKSELEMAQ 1296
Cdd:pfam10174 626 -------------------------GQQEMKKKGAQLLEEAR-----RREDNLADNSQQLQLEELMGALEKTRQELDATK 675
|
....*..
gi 1955007402 1297 EDLSMTQ 1303
Cdd:pfam10174 676 ARLSSTQ 682
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
351-471 |
7.55e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.84 E-value: 7.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 351 CSSVSLESSAaeTQEEMLQVLKEKMRLEGQLEALSLEASQALKEK-AELQAQLAALSTKLQAQvecsHSSQQRQDSLSSE 429
Cdd:COG0542 399 AARVRMEIDS--KPEELDELERRLEQLEIEKEALKKEQDEASFERlAELRDELAELEEELEAL----KARWEAEKELIEE 472
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1955007402 430 VDTLKQSCWDLERAMTDLQNMLEAKNASLASSNNDLQ--VAEEQ 471
Cdd:COG0542 473 IQELKEELEQRYGKIPELEKELAELEEELAELAPLLReeVTEED 516
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
394-845 |
8.50e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 8.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 394 EKAELQAQLAALSTKLQAQVECSHSSQQRQDSLSSEVDtlkqscwdlerAMTDLQNMLEAknaslassnnDLQVAEEQYQ 473
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELE-----------ELSARESDLEQ----------DYQAASDHLN 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 474 RLMAKV---EDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTsklkASQAEISSLQSVRQWYQQQLAlAQEARV 550
Cdd:COG3096 338 LVQTALrqqEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLE----AAEEEVDSLKSQLADYQQALD-VQQTRA 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 551 rlqgemahIQVGQMTQAgllehlkLENVSLSQQLTE-TQHRSMKEKGRIAAQLQGIEADMLDQEAAFMQIQEAKTMVEED 629
Cdd:COG3096 413 --------IQYQQAVQA-------LEKARALCGLPDlTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 630 LQrRLEEFEGERERLQRMADSAASLEQQLEQVKLTllqrdQQLEALQQEHLDLMKQLTLTQEALQSREQ----------S 699
Cdd:COG3096 478 YE-LVCKIAGEVERSQAWQTARELLRRYRSQQALA-----QRLQQLRAQLAELEQRLRQQQNAERLLEEfcqrigqqldA 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 700 LDALQTHYDELQARLGELQGEAASredticlLQNEKIILEAALQAAKSGKEELdrgaRRLEEGTEETSETLEKLREELAI 779
Cdd:COG3096 552 AEELEELLAELEAQLEELEEQAAE-------AVEQRSELRQQLEQLRARIKEL----AARAPAWLAAQDALERLREQSGE 620
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1955007402 780 ksgQVEHLQQETAALKKQMQKIKEQflqqkvmveayrrdATSKDQLIselkATRKRLDSELKELRQ 845
Cdd:COG3096 621 ---ALADSQEVTAAMQQLLEREREA--------------TVERDELA----ARKQALESQIERLSQ 665
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
346-702 |
8.63e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.71 E-value: 8.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 346 RRDSICSSVSLESSAaETQEEMLQVLKEKMRLEGQLE----------ALSLEASQALKEKAELQAQLAALSTKLQAQVEC 415
Cdd:PRK04863 292 RRELYTSRRQLAAEQ-YRLVEMARELAELNEAESDLEqdyqaasdhlNLVQTALRQQEKIERYQADLEELEERLEEQNEV 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 416 SHSSQQRQDSLSSEVDTLKQSCWDLERAMTDLQNMLEAknaslassnndLQVAEEQYQRLMAKVEDMQRSMLSKDNTVHD 495
Cdd:PRK04863 371 VEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDV-----------QQTRAIQYQQAVQALERAKQLCGLPDLTADN 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 496 LRQQMTALQSQLQQVQLERTTLTSKLKASQAEISslqsvrqwyqqQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKL 575
Cdd:PRK04863 440 AEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHS-----------QFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 576 ENV-----SLSQQLTETQHRSMKEKG--RIAAQLQGIEADMLDQEAAFMQIQEAKTMVEEDL--------------QRRL 634
Cdd:PRK04863 509 RHLaeqlqQLRMRLSELEQRLRQQQRaeRLLAEFCKRLGKNLDDEDELEQLQEELEARLESLsesvsearerrmalRQQL 588
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1955007402 635 EEFEGERERLQRMA----DSAASLEQQLEQVKLTLLQRdQQLEALQQEHLDLMKQLTLTQEALQSREQSLDA 702
Cdd:PRK04863 589 EQLQARIQRLAARApawlAAQDALARLREQSGEEFEDS-QDVTEYMQQLLERERELTVERDELAARKQALDE 659
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
746-1283 |
8.70e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.89 E-value: 8.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 746 KSGKEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKK--QMQKIKEQFLQQKV------------- 810
Cdd:PTZ00121 1073 KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaeDARKAEEARKAEDArkaeearkaedak 1152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 811 MVEAYRRDATSKDQLISELKATRKRLDSELK--------ELR--------QELMQVHGEKRTAEAELSRLHREVAQVR-- 872
Cdd:PTZ00121 1153 RVEIARKAEDARKAEEARKAEDAKKAEAARKaeevrkaeELRkaedarkaEAARKAEEERKAEEARKAEDAKKAEAVKka 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 873 QHMADLEGHLQSAQKER--DEMETHLQSLQFDKEQMVAVTEANEALK----KQIEELQQ--EARKAitEQKQKMRRLGSD 944
Cdd:PTZ00121 1233 EEAKKDAEEAKKAEEERnnEEIRKFEEARMAHFARRQAAIKAEEARKadelKKAEEKKKadEAKKA--EEKKKADEAKKK 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 945 LTSAQKEMKTKHKAYE-NAVGILSRRLQEALAAKEAADAELGQLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEK 1023
Cdd:PTZ00121 1311 AEEAKKADEAKKKAEEaKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1024 ELQEVIALTSQELEESREKVLELEDELQESRGFRKK---IKRLEESNKKL-----ALELE---HEKGKLTGLGQSNAALR 1092
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAeeakkADEAKkkaEEAKKAEEAKKKAEEAK 1470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1093 EHNSILETALAKREADlvQLNLQVQAVLQRKEEEDRQMKHLVQALQASLEKEKEKVNSLKEQVAAAKV-EAGHNRRHFKA 1171
Cdd:PTZ00121 1471 KADEAKKKAEEAKKAD--EAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAdEAKKAEEKKKA 1548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 1172 ASLELSEVKKELQAKEHLVQKLQAEAD-DLQIREGKHSQEIaqfqaelAEARAQLQLLQKQLDEQLSKQPVGNQEMENLK 1250
Cdd:PTZ00121 1549 DELKKAEELKKAEEKKKAEEAKKAEEDkNMALRKAEEAKKA-------EEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK 1621
|
570 580 590
....*....|....*....|....*....|...
gi 1955007402 1251 WEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQ 1283
Cdd:PTZ00121 1622 AEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
826-1121 |
9.43e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 9.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 826 ISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQ 905
Cdd:COG4372 47 LEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQD 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 906 MVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELG 985
Cdd:COG4372 127 LEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAE 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 986 QLRAQGGSSDSSLALHERIQALEAELQAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEE 1065
Cdd:COG4372 207 KLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELE 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1955007402 1066 SNKKLALELEHEKGKLTGLGQSNAALREHNSILETALAKREADLVQLNLQVQAVLQ 1121
Cdd:COG4372 287 ALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADL 342
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
387-733 |
9.71e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.71 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 387 EASQALKEKAELQAQLAALSTKLqaqvecsHSSQQRQDSLSSEVDtlkqscwDLERAMTDLQNMLEAKNASLASSNNDLQ 466
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQL-------AAEQYRLVEMARELA-------ELNEAESDLEQDYQAASDHLNLVQTALR 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 467 vAEEQYQRLMAKVEDMQRSMLSKDNTVHDLRQQMTALQSQLQQVQLERTTLTSKLKASQAEISSLQSVRQWYQQQLALAQ 546
Cdd:PRK04863 346 -QQEKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALE 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 547 EARVRLQ---------GEMAHIQVGQMTQAGlLEHLKLEN-VSLSQQLTETQHRSMKEKGRIAAQ--------------L 602
Cdd:PRK04863 425 RAKQLCGlpdltadnaEDWLEEFQAKEQEAT-EELLSLEQkLSVAQAAHSQFEQAYQLVRKIAGEvsrseawdvarellR 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955007402 603 QGIEADMLDQ--EAAFMQIQEAKTMVEE--DLQRRLEEFEGereRLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQE 678
Cdd:PRK04863 504 RLREQRHLAEqlQQLRMRLSELEQRLRQqqRAERLLAEFCK---RLGKNLDDEDELEQLQEELEARLESLSESVSEARER 580
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1955007402 679 HLDLMKQltltQEALQSREQSLDALQTHYDELQ---ARLGELQGEA-ASREDTICLLQN 733
Cdd:PRK04863 581 RMALRQQ----LEQLQARIQRLAARAPAWLAAQdalARLREQSGEEfEDSQDVTEYMQQ 635
|
|
| |
