BLOC-3 complex member HPS4 isoform f [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Intu_longin_1 | pfam19031 | First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain ... |
15-121 | 1.81e-31 | |||
First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain of the HerMon (Hermansky-Pudlak syndrome and MON1/CCZ1) family, including protein sequences of INTU, CCZ1 and HPS4 families. The Mon1/Ccz1 complex (MC1) is the GDP/GTP exchange factor (GEF) for the Rab GTPase Ypt7/Rab7 during vesicular trafficking. The Hps1/Hps4 complex (BLOC-3) is a Rab32 and Rab38 GEF and is required for biogenesis of melanosomes and platelet dense granules. Inturned (INTU) and Fuzzy (FUZ) proteins interact as members of the ciliogenesis and planar polarity effector (CPLANE) complex that controls recruitment of intraflagellar transport machinery to the basal body of primary cilia. : Pssm-ID: 436911 Cd Length: 112 Bit Score: 118.49 E-value: 1.81e-31
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Intu_longin_3 super family | cl41027 | Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and ... |
598-652 | 1.43e-10 | |||
Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and related proteins. The actual alignment was detected with superfamily member pfam19033: Pssm-ID: 436913 Cd Length: 98 Bit Score: 58.49 E-value: 1.43e-10
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dnaA super family | cl42516 | chromosomal replication initiator protein DnaA; |
414-531 | 8.31e-03 | |||
chromosomal replication initiator protein DnaA; The actual alignment was detected with superfamily member PRK14086: Pssm-ID: 455861 [Multi-domain] Cd Length: 617 Bit Score: 39.42 E-value: 8.31e-03
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Name | Accession | Description | Interval | E-value | |||
Intu_longin_1 | pfam19031 | First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain ... |
15-121 | 1.81e-31 | |||
First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain of the HerMon (Hermansky-Pudlak syndrome and MON1/CCZ1) family, including protein sequences of INTU, CCZ1 and HPS4 families. The Mon1/Ccz1 complex (MC1) is the GDP/GTP exchange factor (GEF) for the Rab GTPase Ypt7/Rab7 during vesicular trafficking. The Hps1/Hps4 complex (BLOC-3) is a Rab32 and Rab38 GEF and is required for biogenesis of melanosomes and platelet dense granules. Inturned (INTU) and Fuzzy (FUZ) proteins interact as members of the ciliogenesis and planar polarity effector (CPLANE) complex that controls recruitment of intraflagellar transport machinery to the basal body of primary cilia. Pssm-ID: 436911 Cd Length: 112 Bit Score: 118.49 E-value: 1.81e-31
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Intu_longin_3 | pfam19033 | Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and ... |
598-652 | 1.43e-10 | |||
Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and related proteins. Pssm-ID: 436913 Cd Length: 98 Bit Score: 58.49 E-value: 1.43e-10
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dnaA | PRK14086 | chromosomal replication initiator protein DnaA; |
414-531 | 8.31e-03 | |||
chromosomal replication initiator protein DnaA; Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 39.42 E-value: 8.31e-03
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Name | Accession | Description | Interval | E-value | |||
Intu_longin_1 | pfam19031 | First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain ... |
15-121 | 1.81e-31 | |||
First Longin domain of INTU, CCZ1 and HPS4; This entry is specific to the first Longin domain of the HerMon (Hermansky-Pudlak syndrome and MON1/CCZ1) family, including protein sequences of INTU, CCZ1 and HPS4 families. The Mon1/Ccz1 complex (MC1) is the GDP/GTP exchange factor (GEF) for the Rab GTPase Ypt7/Rab7 during vesicular trafficking. The Hps1/Hps4 complex (BLOC-3) is a Rab32 and Rab38 GEF and is required for biogenesis of melanosomes and platelet dense granules. Inturned (INTU) and Fuzzy (FUZ) proteins interact as members of the ciliogenesis and planar polarity effector (CPLANE) complex that controls recruitment of intraflagellar transport machinery to the basal body of primary cilia. Pssm-ID: 436911 Cd Length: 112 Bit Score: 118.49 E-value: 1.81e-31
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Intu_longin_3 | pfam19033 | Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and ... |
598-652 | 1.43e-10 | |||
Intu longin-like domain 3; This entry represents a longin-like domain found in Intu and related proteins. Pssm-ID: 436913 Cd Length: 98 Bit Score: 58.49 E-value: 1.43e-10
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dnaA | PRK14086 | chromosomal replication initiator protein DnaA; |
414-531 | 8.31e-03 | |||
chromosomal replication initiator protein DnaA; Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 39.42 E-value: 8.31e-03
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Blast search parameters | ||||
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