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Conserved domains on  [gi|2311270596|ref|NP_001399323|]
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epsin-1 isoform 17 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 77-244 1.09e-07

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.84  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  77 PQASDPWGGPASVPTAVPVaaaasdpwGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPD 156
Cdd:PRK07764  615 PAAPAAPAAPAAPAPAGAA--------AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 157 PWGSSDGGAPVSGPPSSDPWAPAPA--FSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELELLA 234
Cdd:PRK07764  687 PAAPAAPAGAAPAQPAPAPAATPPAgqADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAP 766

                         170
                  ....*....|
gi 2311270596 235 GEVPARSPGA 244
Cdd:PRK07764  767 AAAPAAAPPP 776
 
Name Accession Description Interval E-value
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 77-244 1.09e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.84  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  77 PQASDPWGGPASVPTAVPVaaaasdpwGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPD 156
Cdd:PRK07764  615 PAAPAAPAAPAAPAPAGAA--------AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 157 PWGSSDGGAPVSGPPSSDPWAPAPA--FSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELELLA 234
Cdd:PRK07764  687 PAAPAAPAGAAPAQPAPAPAATPPAgqADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAP 766

                         170
                  ....*....|
gi 2311270596 235 GEVPARSPGA 244
Cdd:PRK07764  767 AAAPAAAPPP 776
 
Name Accession Description Interval E-value
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 77-244 1.09e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 53.84  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  77 PQASDPWGGPASVPTAVPVaaaasdpwGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPD 156
Cdd:PRK07764  615 PAAPAAPAAPAAPAPAGAA--------AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 157 PWGSSDGGAPVSGPPSSDPWAPAPA--FSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELELLA 234
Cdd:PRK07764  687 PAAPAAPAGAAPAQPAPAPAATPPAgqADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAP 766

                         170
                  ....*....|
gi 2311270596 235 GEVPARSPGA 244
Cdd:PRK07764  767 AAAPAAAPPP 776
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 74-209 3.42e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.21  E-value: 3.42e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  74 PAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPA--ADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGE 151
Cdd:PRK07764  649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPApaAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2311270596 152 GPTPdpwGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVGGFDTEPDE 209
Cdd:PRK07764  729 SAPS---PAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 72-325 7.33e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.16  E-value: 7.33e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596   72 TTPAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPwggtPAPAAGE 151
Cdd:PHA03307   113 SPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEE----TARAPSS 188

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  152 GPTPDPWGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELE 231
Cdd:PHA03307   189 PPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTR 268

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  232 LLAGEVPARSPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGSKASNPFL 311
Cdd:PHA03307   269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348

                          250
                   ....*....|....
gi 2311270596  312 PSGAPPTGPSVTNP 325
Cdd:PHA03307   349 RSPSPSRPPPPADP 362
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 73-175 7.83e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.59  E-value: 7.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  73 TPAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEG 152
Cdd:PRK07764  402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                          90       100
                  ....*....|....*....|...
gi 2311270596 153 PTPDPWGSSDGGAPVSGPPSSDP 175
Cdd:PRK07764  482 PAPPAAPAPAAAPAAPAAPAAPA 504
PHA03247 PHA03247
large tegument protein UL36; Provisional
 63-194 1.53e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.53e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596   63 SLMDLADVFTTPAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPT--------PASGDPWRPAAPT 134
Cdd:PHA03247  2694 SLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPA 2773

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  135 GPSVDPWGGTPAPAAGE-----GPTPDPWGSSDGGAPVSG-----PPSSDPWAPAPAFSDPWGGSPAKPS 194
Cdd:PHA03247  2774 APAAGPPRRLTRPAVASlsesrESLPSPWDPADPPAAVLApaaalPPAASPAGPLPPPTSAQPTAPPPPP 2843
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 104-209 5.49e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 5.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 104 GGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGAPVSGPPSSDPW-APAPAF 182
Cdd:PRK07764  595 AGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDgWPAKAG 674

                          90       100
                  ....*....|....*....|....*..
gi 2311270596 183 SDPWGGSPAKPSSNGTAVGGFDTEPDE 209
Cdd:PRK07764  675 GAAPAAPPPAPAPAAPAAPAGAAPAQP 701
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
73-241 5.57e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.17  E-value: 5.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  73 TPAPPQASdPWGGPASVPTAVPVAAAASdpwggpAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEG 152
Cdd:PRK12323  398 APAAPPAA-PAAAPAAAAAARAVAAAPA------RRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPR 470

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 153 PTPDPwgssDGGAPVSGPPSSDPwAPAPAFSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELEL 232
Cdd:PRK12323  471 PVAAA----AAAAPARAAPAAAP-APADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAP 545


                  ....*....
gi 2311270596 233 LAGEVPARS 241
Cdd:PRK12323  546 AAAPAPRAA 554
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 73-180 1.10e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.85  E-value: 1.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  73 TPAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEG 152
Cdd:PRK14951  380 TPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPET 459

                          90       100
                  ....*....|....*....|....*...
gi 2311270596 153 PTPDPWGSSDGGAPVSGPPSSDPWAPAP 180
Cdd:PRK14951  460 VAIPVRVAPEPAVASAAPAPAAAPAAAR 487
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 72-181 1.17e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 1.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  72 TTPAPPQASDPWGGPASVPTAVPVAAAASDPwgGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPA--PAA 149
Cdd:PRK07764  391 AGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA--APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSaqPAP 468

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2311270596 150 GEGPTPDPWGSSDGGAPVSGPPSSDPWAPAPA 181
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAP 500
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 104-199 2.42e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.97  E-value: 2.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 104 GGPAVPPAADPwGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGAPVSGPPSSDPWAPAPAFS 183
Cdd:PRK07764  400 SAAAAAPAAAP-APAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTA 478

                          90
                  ....*....|....*.
gi 2311270596 184 DPWGGSPAKPSSNGTA 199
Cdd:PRK07764  479 APAPAPPAAPAPAAAP 494
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 76-278 2.53e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.97  E-value: 2.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  76 PPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGA-APTPASGDPWRPAAPTGPSVDPWGGTPAPAagegpT 154
Cdd:PRK07764  591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAaAPAEASAAPAPGVAAPEHHPKHVAVPDASD-----G 665

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 155 PDPWGSSDGGAPVSGPPSSDPWAPAPAfsdPWGGSPAKPSSNGTAvggfdTEPDEFSDFDRLRTALPTSGSSTGELELLA 234
Cdd:PRK07764  666 GDGWPAKAGGAAPAAPPPAPAPAAPAA---PAGAAPAQPAPAPAA-----TPPAGQADDPAAQPPQAAQGASAPSPAADD 737

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2311270596 235 GEVPARSPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTRKTPE 278
Cdd:PRK07764  738 PVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSE 781
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 107-195 2.88e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.87  E-value: 2.88e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  107 AVPPA-----ADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGAPVSGPPSSDPWAPAPA 181
Cdd:PRK12270    24 SVDPSwreffADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAA 103

                           90
                   ....*....|....
gi 2311270596  182 FSDPWGGSPAKPSS 195
Cdd:PRK12270   104 AAAAPAAAAVEDEV 117
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
74-239 3.49e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.47  E-value: 3.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  74 PAPPQASDPWG-GPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPwRPAAPTGPSVDPWGGTPAPAAGEG 152
Cdd:PRK12323  415 AARAVAAAPARrSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPAD 493

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 153 PTPDPWGSSDGGAPVSGPPSSDP---WAPAPAFSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGE 229
Cdd:PRK12323  494 DDPPPWEELPPEFASPAPAQPDAapaGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573

                         170
                  ....*....|
gi 2311270596 230 LELLAGEVPA 239
Cdd:PRK12323  574 PDMFDGDWPA 583
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 74-201 3.84e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.20  E-value: 3.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  74 PAPPQASDPWGGPASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGP 153
Cdd:PRK07764  678 PAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQ 757

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2311270596 154 TPDPWGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVG 201
Cdd:PRK07764  758 PPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVA 805
PHA03247 PHA03247
large tegument protein UL36; Provisional
 106-181 4.39e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.54  E-value: 4.39e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2311270596  106 PAVPPAADPWGGAAPTPASGDPWRPAAPTgpsvdpwggTPAPAAGEGPTPDPWGSSDGGAPVSGPPSSDPWAPAPA 181
Cdd:PHA03247   255 PAPPPVVGEGADRAPETARGATGPPPPPE---------AAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPA 321
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
68-240 4.41e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.09  E-value: 4.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  68 ADVFTTPAPPQASDPWGGPASVPTAVPVAAAASDPWGGP--AVPPAADPWGG----AAPTPASGDPWRPAAPTGPSVDPW 141
Cdd:PRK12323  420 AAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPaaAARPAAAGPRPvaaaAAAAPARAAPAAAPAPADDDPPPW 499

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596 142 GGTPAPAAGEGPTP-DPWGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVGGFDTEPDEFSDfdrlrtal 220
Cdd:PRK12323  500 EELPPEFASPAPAQpDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASAS-------- 571

                         170       180
                  ....*....|....*....|
gi 2311270596 221 PTSGSSTGELELLAGEVPAR 240
Cdd:PRK12323  572 GLPDMFDGDWPALAARLPVR 591
PHA03247 PHA03247
large tegument protein UL36; Provisional
 117-333 4.70e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.15  E-value: 4.70e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  117 GAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDPW---------GSSDGGAPvsgPPSSDPWAPAPAFSDPWG 187
Cdd:PHA03247  2493 GAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLtwirgleelASDDAGDP---PPPLPPAAPPAAPDRSVP 2569

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  188 GSPAKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSSTGELELLAGE---------VPARSPGAFDMSGVGGSLAESV 258
Cdd:PHA03247  2570 PPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPpdthapdppPPSPSPAANEPDPHPPPTVPPP 2649

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  259 GSPPPAATPTPTPPTRKTPESF--------------------LGPNAALVDLDSLVSRPGPTPPGSKASNPFLPSGAPPT 318
Cdd:PHA03247  2650 ERPRDDPAPGRVSRPRRARRLGraaqassppqrprrraarptVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAAR 2729

                          250
                   ....*....|....*
gi 2311270596  319 GPSVTNPFQPAPPAT 333
Cdd:PHA03247  2730 QASPALPAAPAPPAV 2744
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 86-206 5.02e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.20  E-value: 5.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  86 PASVPTAVPVAAAASDPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDPwgssdGGA 165
Cdd:PRK07764  395 AAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP-----APA 469

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2311270596 166 PVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVGGFDTE 206
Cdd:PRK07764  470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAA 510
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 73-182 8.73e-03

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 38.17  E-value: 8.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  73 TPAPPQASDPWGGPASVPTAVPvaaaasDPWGGPAVPPAADPWGGAAPTPASGDPWRPA-APTGPSVDPWGGTPAPAAGE 151
Cdd:PHA03269   33 TSAATQKPDPAPAPHQAASRAP------DPAVAPTSAASRKPDLAQAPTPAASEKFDPApAPHQAASRAPDPAVAPQLAA 106

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2311270596 152 GPTPDPW-----GSSDGGAPVSGPPSSDPWAPAPAF 182
Cdd:PHA03269  107 APKPDAAeaftsAAQAHEAPADAGTSAASKKPDPAA 142
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 72-166 9.19e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 38.12  E-value: 9.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311270596  72 TTPAPPQASDPWGGPASVPTAVPVAAAASDPwggPAVPPAADPWGGAAPTPA-SGDPWRPaAPTGPSVDPWGGTPAPAAG 150
Cdd:PRK14959  396 TIPTPGTQGPQGTAPAAGMTPSSAAPATPAP---SAAPSPRVPWDDAPPAPPrSGIPPRP-APRMPEASPVPGAPDSVAS 471

                          90
                  ....*....|....*.
gi 2311270596 151 EGPTPDPWGSSDGGAP 166
Cdd:PRK14959  472 ASDAPPTLGDPSDTAE 487
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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