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Conserved domains on  [gi|2463694940|ref|NP_001405589|]
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tumor protein p53-inducible nuclear protein 2 isoform c [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DOR super family cl20746
DOR family; This family of proteins regulate autophagy and gene transcription.
 17-109 1.17e-19

DOR family; This family of proteins regulate autophagy and gene transcription.


The actual alignment was detected with superfamily member pfam14839:

Pssm-ID: 464343  Cd Length: 215  Bit Score: 82.19  E-value: 1.17e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2463694940  17 EDSNCPGAFVSEEDEVDGWLIIDLQD------SYTAPPDPGASPAPAGRPPPAPSLMDESWFVTPPACFTAEGpgLGPAR 90
Cdd:pfam14839  14 IDDTCTNLSESEEDVSEESSVPVSSDspavfsSLPASLEPLGETSDSCFLQFNSCPMEESWFVTPPPCFTAGG--LTPIK 91

                          90
                  ....*....|....*....
gi 2463694940  91 LQSNPLEDLLIEHPSMSVY 109
Cdd:pfam14839  92 VETSPMENLLIEHPSMSVY 110
 
Name Accession Description Interval E-value
DOR pfam14839
DOR family; This family of proteins regulate autophagy and gene transcription.
 17-109 1.17e-19

DOR family; This family of proteins regulate autophagy and gene transcription.


Pssm-ID: 464343  Cd Length: 215  Bit Score: 82.19  E-value: 1.17e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2463694940  17 EDSNCPGAFVSEEDEVDGWLIIDLQD------SYTAPPDPGASPAPAGRPPPAPSLMDESWFVTPPACFTAEGpgLGPAR 90
Cdd:pfam14839  14 IDDTCTNLSESEEDVSEESSVPVSSDspavfsSLPASLEPLGETSDSCFLQFNSCPMEESWFVTPPPCFTAGG--LTPIK 91

                          90
                  ....*....|....*....
gi 2463694940  91 LQSNPLEDLLIEHPSMSVY 109
Cdd:pfam14839  92 VETSPMENLLIEHPSMSVY 110
 
Name Accession Description Interval E-value
DOR pfam14839
DOR family; This family of proteins regulate autophagy and gene transcription.
 17-109 1.17e-19

DOR family; This family of proteins regulate autophagy and gene transcription.


Pssm-ID: 464343  Cd Length: 215  Bit Score: 82.19  E-value: 1.17e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2463694940  17 EDSNCPGAFVSEEDEVDGWLIIDLQD------SYTAPPDPGASPAPAGRPPPAPSLMDESWFVTPPACFTAEGpgLGPAR 90
Cdd:pfam14839  14 IDDTCTNLSESEEDVSEESSVPVSSDspavfsSLPASLEPLGETSDSCFLQFNSCPMEESWFVTPPPCFTAGG--LTPIK 91

                          90
                  ....*....|....*....
gi 2463694940  91 LQSNPLEDLLIEHPSMSVY 109
Cdd:pfam14839  92 VETSPMENLLIEHPSMSVY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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