clusterin-associated protein 1 isoform 9 [Mus musculus]
Cluap1 superfamily-containing protein( domain architecture ID 709433)
Cluap1 superfamily-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Cluap1 super family | cl25650 | Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of ... |
1-99 | 1.18e-48 | |||
Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin. Cluap1 expression is highest in the nucleus and gradually increases during late S to G2/M phases of the cell cycle and returns to the basal level in the G0/G1 phases. In addition, it is upregulated in colon cancer tissues compared to corresponding non-cancerous mucosa. It thus plays a crucial role in the life of the cell. The actual alignment was detected with superfamily member pfam10234: Pssm-ID: 463013 [Multi-domain] Cd Length: 268 Bit Score: 161.21 E-value: 1.18e-48
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Name | Accession | Description | Interval | E-value | |||
Cluap1 | pfam10234 | Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of ... |
1-99 | 1.18e-48 | |||
Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin. Cluap1 expression is highest in the nucleus and gradually increases during late S to G2/M phases of the cell cycle and returns to the basal level in the G0/G1 phases. In addition, it is upregulated in colon cancer tissues compared to corresponding non-cancerous mucosa. It thus plays a crucial role in the life of the cell. Pssm-ID: 463013 [Multi-domain] Cd Length: 268 Bit Score: 161.21 E-value: 1.18e-48
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1-143 | 5.28e-03 | |||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 37.73 E-value: 5.28e-03
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Smc | COG1196 | Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
5-121 | 9.58e-03 | |||
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 37.22 E-value: 9.58e-03
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Name | Accession | Description | Interval | E-value | |||
Cluap1 | pfam10234 | Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of ... |
1-99 | 1.18e-48 | |||
Clusterin-associated protein-1; This protein is conserved from worms to humans. The protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin. Cluap1 expression is highest in the nucleus and gradually increases during late S to G2/M phases of the cell cycle and returns to the basal level in the G0/G1 phases. In addition, it is upregulated in colon cancer tissues compared to corresponding non-cancerous mucosa. It thus plays a crucial role in the life of the cell. Pssm-ID: 463013 [Multi-domain] Cd Length: 268 Bit Score: 161.21 E-value: 1.18e-48
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1-143 | 5.28e-03 | |||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 37.73 E-value: 5.28e-03
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Smc | COG1196 | Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
5-121 | 9.58e-03 | |||
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 37.22 E-value: 9.58e-03
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Blast search parameters | ||||
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