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Conserved domains on  [gi|9257192|ref|NP_001608|]
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beta-adducin isoform a [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Aldolase_II super family cl00214
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
 130-379 6.88e-72

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


The actual alignment was detected with superfamily member PRK07044:

Pssm-ID: 469663  Cd Length: 252  Bit Score: 234.36  E-value: 6.88e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVekGSSCFPVDTTGF 209
Cdd:PRK07044  14 EWQARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNLVKIDLDGNVV--DDSPYPVNPAGF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   210 CLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNALLV-GDMAYYDFNGEMEQEADRINLQKCLGPtCKILVLR 288
Cdd:PRK07044  92 TIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGLLPLSQHALQFyGRLAYHDYEGIALDLDEGERLVADLGD-KPAMLLR 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   289 NHGVVALGDTVEEAFYKIFHLQAACEIQVSALSsaGGVENLILleqekhrPHEVGSVQWAGSTFGPMQKSrlGEHEFEAL 368
Cdd:PRK07044 171 NHGLLTVGRTVAEAFLLMYTLERACEIQVAAQA--GGGELVLP-------PPEVAERTARQSLFDPGAGA--GELAWPAL 239

                        250
                 ....*....|...
gi 9257192   369 MRMLD--NLGYRT 379
Cdd:PRK07044 240 LRKLDriDPGYRD 252
LGT super family cl00478
Prolipoprotein diacylglyceryl transferase;
509-647 2.74e-05

Prolipoprotein diacylglyceryl transferase;


The actual alignment was detected with superfamily member PRK13108:

Pssm-ID: 469786 [Multi-domain]  Cd Length: 460  Bit Score: 47.28  E-value: 2.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   509 DVKSAGPQSQllasviAEKSRSPSTESQLMSKGDEDTKDDSEET---VPNPFSQLTDQELEEYKKEVERKKL-ELDGEKE 584
Cdd:PRK13108 311 AASAVGPVGP------GEPNQPDDVAEAVKAEVAEVTDEVAAESvvqVADRDGESTPAVEETSEADIEREQPgDLAGQAP 384

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9257192   585 TAPEEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSLEEGTKKTETSKAATTEPETTQPEGV 647
Cdd:PRK13108 385 AAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDGI 447
 
Name Accession Description Interval E-value
PRK07044 PRK07044
aldolase II superfamily protein; Provisional
 130-379 6.88e-72

aldolase II superfamily protein; Provisional


Pssm-ID: 235916  Cd Length: 252  Bit Score: 234.36  E-value: 6.88e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVekGSSCFPVDTTGF 209
Cdd:PRK07044  14 EWQARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNLVKIDLDGNVV--DDSPYPVNPAGF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   210 CLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNALLV-GDMAYYDFNGEMEQEADRINLQKCLGPtCKILVLR 288
Cdd:PRK07044  92 TIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGLLPLSQHALQFyGRLAYHDYEGIALDLDEGERLVADLGD-KPAMLLR 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   289 NHGVVALGDTVEEAFYKIFHLQAACEIQVSALSsaGGVENLILleqekhrPHEVGSVQWAGSTFGPMQKSrlGEHEFEAL 368
Cdd:PRK07044 171 NHGLLTVGRTVAEAFLLMYTLERACEIQVAAQA--GGGELVLP-------PPEVAERTARQSLFDPGAGA--GELAWPAL 239

                        250
                 ....*....|...
gi 9257192   369 MRMLD--NLGYRT 379
Cdd:PRK07044 240 LRKLDriDPGYRD 252
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
 130-340 8.53e-72

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 232.64  E-value: 8.53e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  130 ERLMRcKISSVYRLLDLYGWaqlsDTYVTLRVSKEQD---HFLISPKGVSCSEVTASSLIKVNILGEVVE--KGSSCFPv 204
Cdd:cd00398   1 EKLKR-KIIAACLLLDLYGW----VTGTGGNVSARDRdrgYFLITPSGVDYEEMTASDLVVVDAQGKVVEgkKPSSETP- 74

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  205 dttgfcLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNALLV---GDMAYYDFNGEMeQEADRINLQKCLG-P 280
Cdd:cd00398  75 ------LHLALYRARPDIGCIVHTHSTHATAVSQLKEGLIPAGHTACAVyftGDIPCTPYMTPE-TGEDEIGTQRALGfP 147

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 9257192  281 TCKILVLRNHGVVALGDTVEEAFYKIFHLQAACEIQVSALSSAGGV--ENLILLEQEKHRPH 340
Cdd:cd00398 148 NSKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLppISLELLNKEYLRKH 209
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
 135-317 2.79e-51

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 176.20  E-value: 2.79e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    135 CKISSVYRLLDLYGWAQLSDTYVTLRVskEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKG---SSCFPvdttgfcL 211
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRL--PGDGFLITPSGVDFGELTPEDLVVVDLDGNVVEGGlkpSSETP-------L 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    212 HSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNA--LLVGDMAYYDfNGEMEQEADRINLQKCLGPTCKILVLRN 289
Cdd:pfam00596  72 HLAIYRARPDAGAVVHTHSPYATALSLAKEGLPPITQEAadFLGGDIPIIP-YYTPGTEELGERIAEALGGDRKAVLLRN 150

                         170       180
                  ....*....|....*....|....*...
gi 9257192    290 HGVVALGDTVEEAFYKIFHLQAACEIQV 317
Cdd:pfam00596 151 HGLLVWGKTLEEAFYLAEELERAAEIQL 178
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
 137-317 3.09e-47

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 165.50  E-value: 3.09e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192     137 ISSVYRLLDLYGWAQLSDTYVTLRVsKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKGSscFPVDTTGFCLHSAIY 216
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARV-GEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGG--GPKPSSETPLHLAIY 77

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192     217 AARPDVRCIIHLHTPATAAVSAMKW--GLLPVSHNALLVG-DMAYYDFNGEMEQEADRI-NLQKCLGPT---CKILVLRN 289
Cdd:smart01007  78 RARPDVGAVVHTHSPYATALAALGKplPLLPTEQAAAFLGgEIPYAPYAGPGTELAEEGaELAEALAEAlpdRPAVLLRN 157

                          170       180
                   ....*....|....*....|....*...
gi 9257192     290 HGVVALGDTVEEAFYKIFHLQAACEIQV 317
Cdd:smart01007 158 HGLLVWGKTLEEAFDLAEELEEAAEIQL 185
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
 130-338 2.17e-46

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 163.85  E-value: 2.17e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVskEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKGSscfpVDTTGF 209
Cdd:COG0235   3 EEELREELAAAGRRLARRGLVDGTAGNISVRL--DDDRFLITPSGVDFGELTPEDLVVVDLDGNVVEGDL----KPSSET 76

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  210 CLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHN--ALLVGDMAYYDFNG-EMEQEADRInlQKCLGpTCKILV 286
Cdd:COG0235  77 PLHLAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTeaAAFLGDVPVVPYAGpGTEELAEAI--AEALG-DRPAVL 153

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 9257192  287 LRNHGVVALGDTVEEAFYKIFHLQAACEIQVSALsSAGGVENLILLEQEKHR 338
Cdd:COG0235 154 LRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLAL-ALGGPLVLSDEEIDKLA 204
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 509-647 2.74e-05

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 47.28  E-value: 2.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   509 DVKSAGPQSQllasviAEKSRSPSTESQLMSKGDEDTKDDSEET---VPNPFSQLTDQELEEYKKEVERKKL-ELDGEKE 584
Cdd:PRK13108 311 AASAVGPVGP------GEPNQPDDVAEAVKAEVAEVTDEVAAESvvqVADRDGESTPAVEETSEADIEREQPgDLAGQAP 384

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9257192   585 TAPEEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSLEEGTKKTETSKAATTEPETTQPEGV 647
Cdd:PRK13108 385 AAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDGI 447
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 581-665 2.83e-05

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 47.20  E-value: 2.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    581 GEKETAPEEPGSPAKSAPASPvqSPAKEAETKSPLVSPSKSLEEGTKKTETSKAATTEPETTQPEGVVVNGREEEQTAEE 660
Cdd:TIGR00601  85 APPAATPTSAPTPTPSPPASP--ASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAASTLVVGSERETTIEE 162


                  ....*
gi 9257192    661 ILSKG 665
Cdd:TIGR00601 163 IMEMG 167
 
Name Accession Description Interval E-value
PRK07044 PRK07044
aldolase II superfamily protein; Provisional
 130-379 6.88e-72

aldolase II superfamily protein; Provisional


Pssm-ID: 235916  Cd Length: 252  Bit Score: 234.36  E-value: 6.88e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVekGSSCFPVDTTGF 209
Cdd:PRK07044  14 EWQARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNLVKIDLDGNVV--DDSPYPVNPAGF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   210 CLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNALLV-GDMAYYDFNGEMEQEADRINLQKCLGPtCKILVLR 288
Cdd:PRK07044  92 TIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGLLPLSQHALQFyGRLAYHDYEGIALDLDEGERLVADLGD-KPAMLLR 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   289 NHGVVALGDTVEEAFYKIFHLQAACEIQVSALSsaGGVENLILleqekhrPHEVGSVQWAGSTFGPMQKSrlGEHEFEAL 368
Cdd:PRK07044 171 NHGLLTVGRTVAEAFLLMYTLERACEIQVAAQA--GGGELVLP-------PPEVAERTARQSLFDPGAGA--GELAWPAL 239

                        250
                 ....*....|...
gi 9257192   369 MRMLD--NLGYRT 379
Cdd:PRK07044 240 LRKLDriDPGYRD 252
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
 130-340 8.53e-72

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 232.64  E-value: 8.53e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  130 ERLMRcKISSVYRLLDLYGWaqlsDTYVTLRVSKEQD---HFLISPKGVSCSEVTASSLIKVNILGEVVE--KGSSCFPv 204
Cdd:cd00398   1 EKLKR-KIIAACLLLDLYGW----VTGTGGNVSARDRdrgYFLITPSGVDYEEMTASDLVVVDAQGKVVEgkKPSSETP- 74

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  205 dttgfcLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNALLV---GDMAYYDFNGEMeQEADRINLQKCLG-P 280
Cdd:cd00398  75 ------LHLALYRARPDIGCIVHTHSTHATAVSQLKEGLIPAGHTACAVyftGDIPCTPYMTPE-TGEDEIGTQRALGfP 147

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 9257192  281 TCKILVLRNHGVVALGDTVEEAFYKIFHLQAACEIQVSALSSAGGV--ENLILLEQEKHRPH 340
Cdd:cd00398 148 NSKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLppISLELLNKEYLRKH 209
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
 135-317 2.79e-51

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 176.20  E-value: 2.79e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    135 CKISSVYRLLDLYGWAQLSDTYVTLRVskEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKG---SSCFPvdttgfcL 211
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRL--PGDGFLITPSGVDFGELTPEDLVVVDLDGNVVEGGlkpSSETP-------L 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    212 HSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNA--LLVGDMAYYDfNGEMEQEADRINLQKCLGPTCKILVLRN 289
Cdd:pfam00596  72 HLAIYRARPDAGAVVHTHSPYATALSLAKEGLPPITQEAadFLGGDIPIIP-YYTPGTEELGERIAEALGGDRKAVLLRN 150

                         170       180
                  ....*....|....*....|....*...
gi 9257192    290 HGVVALGDTVEEAFYKIFHLQAACEIQV 317
Cdd:pfam00596 151 HGLLVWGKTLEEAFYLAEELERAAEIQL 178
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
 137-317 3.09e-47

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 165.50  E-value: 3.09e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192     137 ISSVYRLLDLYGWAQLSDTYVTLRVsKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKGSscFPVDTTGFCLHSAIY 216
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARV-GEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGG--GPKPSSETPLHLAIY 77

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192     217 AARPDVRCIIHLHTPATAAVSAMKW--GLLPVSHNALLVG-DMAYYDFNGEMEQEADRI-NLQKCLGPT---CKILVLRN 289
Cdd:smart01007  78 RARPDVGAVVHTHSPYATALAALGKplPLLPTEQAAAFLGgEIPYAPYAGPGTELAEEGaELAEALAEAlpdRPAVLLRN 157

                          170       180
                   ....*....|....*....|....*...
gi 9257192     290 HGVVALGDTVEEAFYKIFHLQAACEIQV 317
Cdd:smart01007 158 HGLLVWGKTLEEAFDLAEELEEAAEIQL 185
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
 130-338 2.17e-46

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 163.85  E-value: 2.17e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVskEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKGSscfpVDTTGF 209
Cdd:COG0235   3 EEELREELAAAGRRLARRGLVDGTAGNISVRL--DDDRFLITPSGVDFGELTPEDLVVVDLDGNVVEGDL----KPSSET 76

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192  210 CLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHN--ALLVGDMAYYDFNG-EMEQEADRInlQKCLGpTCKILV 286
Cdd:COG0235  77 PLHLAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTeaAAFLGDVPVVPYAGpGTEELAEAI--AEALG-DRPAVL 153

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 9257192  287 LRNHGVVALGDTVEEAFYKIFHLQAACEIQVSALsSAGGVENLILLEQEKHR 338
Cdd:COG0235 154 LRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLAL-ALGGPLVLSDEEIDKLA 204
PRK06661 PRK06661
hypothetical protein; Provisional
 141-374 3.90e-36

hypothetical protein; Provisional


Pssm-ID: 168637  Cd Length: 231  Bit Score: 136.11  E-value: 3.90e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   141 YRLLDLYGWAQLSDTYVTLRvSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEKGSscFPVDTTGFCLHSAIYAARP 220
Cdd:PRK06661  11 YRIMAYLSLDDHTYTHLSAR-PKNADFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE--YQYNKTGYFIHGSIYKTRP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   221 DVRCIIHLHTPATAAVSAMKWGLLPVSHNAL-LVGDMAYYDFNG---EMEQEADRinLQKCLGPTcKILVLRNHGVVALG 296
Cdd:PRK06661  88 DISAIFHYHTPASIAVSALKCGLLPISQWALhFYDRISYHNYNSlalDADKQSSR--LVNDLKQN-YVMLLRNHGAITCG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   297 DTVEEAFYKIFHLQAACEIQVSALSSAggvenlillEQEKHRPhevgSVQWAGSTFGPMQ--KSRLGEHEFEALMRMLDN 374
Cdd:PRK06661 165 KTIHEAMFYTYHLEQACKTQCLLNSTK---------KQELIIP----SVEICKKTVKDLLsfEEDLGKRDWAAWLRLIKM 231
PRK06208 PRK06208
class II aldolase/adducin family protein;
130-354 2.75e-27

class II aldolase/adducin family protein;


Pssm-ID: 235743  Cd Length: 274  Bit Score: 112.00  E-value: 2.75e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   130 ERLMR-CKISSVYRLLDLYGWAQLSDTYVTLRVSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEkGSscFPVDTTG 208
Cdd:PRK06208  39 ERLHRkQRLAAAFRLFARFGFDEGLAGHITARDPELPDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVE-GD--RPLNRAA 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   209 FCLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLPVSHNAL-LVGDMAYYD-FNGEM--EQEADRInlQKCLGPTcKI 284
Cdd:PRK06208 116 FAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRPLDPITQDACaFYEDHALFDdFTGVVvdTSEGRRI--AAALGTH-KA 192

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   285 LVLRNHGVVALGDTVEEAFYKIFHLQAACEIQVsaLSSAGGVENLILLEQEKHRPHEVGSVQWAGSTFGP 354
Cdd:PRK06208 193 VILQNHGLLTVGPSVDAAAWWFIALERACQTQL--LAEAAGPPQPIDHETARHTRSQVGSEYGGWFNFQP 260
PRK07490 PRK07490
hypothetical protein; Provisional
 130-322 8.25e-24

hypothetical protein; Provisional


Pssm-ID: 236031 [Multi-domain]  Cd Length: 245  Bit Score: 100.95  E-value: 8.25e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   130 ERLMRCKISSVYRLLDLYGWAQLSDTYVTLRVSKEQDHFLISPKGVSCSEVTASSLIKVNilgevvEKGSSCFP----VD 205
Cdd:PRK07490   8 EEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSADGKQFLLNPKWKHFSRIRASDLLLLD------ADDPSTAErpdvPD 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   206 TTGFCLHSAIYAARPDVRCIIHLHTPATAAVSAMKWG-LLPVSHNALLVGDMAYYDFN-GEMEQEADRINLQKCLGpTCK 283
Cdd:PRK07490  82 ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADPtLPPIDQNTARFFNRVAVDTLyGGMALEEEGERLAGLLG-DKR 160

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 9257192   284 ILVLRNHGVVALGDTVEEAFYKIFHLQAACEIQVSALSS 322
Cdd:PRK07490 161 RLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALST 199
PRK06486 PRK06486
aldolase;
165-373 7.57e-23

aldolase;


Pssm-ID: 235814  Cd Length: 262  Bit Score: 98.63  E-value: 7.57e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   165 QDHFLISPKGVSCSEVTASSLIKVNILGEVVEkGSScfPVDTTGFCLHSAIYAARPDVRCIIHLHTP-ATAAVSAMKWGL 243
Cdd:PRK06486  59 DDLFLVNPYGYAFSEITASDLLICDFDGNVLA-GRG--EPEATAFFIHARIHRAIPRAKAAFHTHMPyATALSLTEGRPL 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   244 LPVSHNAllvgdMAYY-------DFNGEM--EQEADRInlQKCLGpTCKILVLRNHGVVALGDTVEEAFYKIFHLQAACE 314
Cdd:PRK06486 136 TTLGQTA-----LKFYgrtavdeDYNGLAldAAEGDRI--ARAMG-DADIVFLKNHGVMVCGPRIAEAWDDLYYLERACE 207

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9257192   315 IQVSALSSAGGVenlilleqeKHRPHEVgsvqwAGSTFGPMqksRLGEHE-----FEALMRMLD 373
Cdd:PRK06486 208 VQVLAMSTGRPL---------VPVDPAI-----AAAVARQM---REGDREsarlhLEALRRTLD 254
PRK07090 PRK07090
class II aldolase/adducin domain protein; Provisional
 150-338 1.23e-14

class II aldolase/adducin domain protein; Provisional


Pssm-ID: 180832  Cd Length: 260  Bit Score: 74.67  E-value: 1.23e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   150 AQLSDTYVTLRVskeqdhflispkGVSCSEVTASSLIKVNILGEVVEkGSScFPVDTTGFclHSAIYAARPDVRCIIHLH 229
Cdd:PRK07090  59 AEAPGTYYTQRL------------GLGFDEITASNLLLVDEDLNVLD-GEG-MPNPANRF--HSWIYRARPDVNCIIHTH 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   230 TPATAAVSAMKWGLLpVSH--NALLVGDMAYY---------DFNGEMEQEAdrinlqkcLGPTCKILvLRNHGVVALGDT 298
Cdd:PRK07090 123 PPHVAALSMLEVPLV-VSHmdTCPLYDDCAFLkdwpgvpvgNEEGEIISAA--------LGDKRAIL-LSHHGQLVAGKS 192

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 9257192   299 VEEAFYKIFHLQAACEIQVSAlSSAGGVENLI-LLEQEKHR 338
Cdd:PRK07090 193 IEEACVLALLIERAARLQLLA-MAAGPIKPIPpELAREAHD 232
PRK06557 PRK06557
L-ribulose-5-phosphate 4-epimerase; Validated
 157-302 7.30e-10

L-ribulose-5-phosphate 4-epimerase; Validated


Pssm-ID: 235829 [Multi-domain]  Cd Length: 221  Bit Score: 59.64  E-value: 7.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   157 VTLRVsKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEkGSSCFPVDTTGfclHSAIYAARPDVRCIIHLHTP-ATA- 234
Cdd:PRK06557  35 VSARD-PGTDLVVIKPSGVSYDDLTPEDMVVVDLDGNVVE-GDLKPSSDTAS---HLYVYRHMPDVGGVVHTHSTyATAw 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   235 ---------AVSAMK---WGLLPVSHNAlLVGDmayydfngemeqeaDRIN---LQKCLGPTCKILVLRNHGVVALGDTV 299
Cdd:PRK06557 110 aargepipcVLTAMAdefGGPIPVGPFA-LIGD--------------EAIGkgiVETLKGGRSPAVLMQNHGVFTIGKDA 174


                 ...
gi 9257192   300 EEA 302
Cdd:PRK06557 175 EDA 177
PRK08130 PRK08130
putative aldolase; Validated
 167-304 2.01e-09

putative aldolase; Validated


Pssm-ID: 181241 [Multi-domain]  Cd Length: 213  Bit Score: 57.96  E-value: 2.01e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   167 HFLISPKGVSCSEVTASSLIKVNILGEVVE--KGSSCFPvdttgfcLHSAIYAARPDVRCIIHLHTPATAAVSamkwgLL 244
Cdd:PRK08130  38 GWLVTPTGSCLGRLDPARLSKVDADGNWLSgdKPSKEVP-------LHRAIYRNNPECGAVVHLHSTHLTALS-----CL 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9257192   245 PV--SHNAL---------LVGDMA---YY---DfngemEQEADRInlqKCLGPTCKILVLRNHGVVALGDTVEEAFY 304
Cdd:PRK08130 106 GGldPTNVLppftpyyvmRVGHVPlipYYrpgD-----PAIAEAL---AGLAARYRAVLLANHGPVVWGSSLEAAVN 174
PRK06833 PRK06833
L-fuculose-phosphate aldolase;
163-315 1.31e-08

L-fuculose-phosphate aldolase;


Pssm-ID: 180717 [Multi-domain]  Cd Length: 214  Bit Score: 55.91  E-value: 1.31e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   163 KEQDHFLISPKGVSCSEVTASSLIKVNILGEVVEkGSScfpVDTTGFCLHSAIYAARPDVRCIIHLHTPATAAVSAMKWG 242
Cdd:PRK06833  35 REQGLMAITPSGIDYFEIKPEDIVIMDLDGKVVE-GER---KPSSELDMHLIFYRNREDINAIVHTHSPYATTLACLGWE 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   243 LLPVSHNALLVGD---MAYYDFNG--EMEQEA-----DRinlqkclgptcKILVLRNHGVVALGDTVEEAFYKIFHLQAA 312
Cdd:PRK06833 111 LPAVHYLIAVAGPnvrCAEYATFGtkELAENAfeameDR-----------RAVLLANHGLLAGANNLKNAFNIAEEIEFC 179


                 ...
gi 9257192   313 CEI 315
Cdd:PRK06833 180 AEI 182
PRK08333 PRK08333
aldolase;
166-305 2.20e-08

aldolase;


Pssm-ID: 181393 [Multi-domain]  Cd Length: 184  Bit Score: 54.44  E-value: 2.20e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   166 DHFLISPKGVSCSEVTASSLIKVNILGEVVekgSSCFPvdTTGFCLHSAIYAARPDVRCIIHLHTPATAAVSAMKWGLLP 245
Cdd:PRK08333  34 NLVFIKATGSVMDELTREQVAVIDLNGNQL---SSVRP--SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEEELP 108

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 9257192   246 V--SHNALLVGDMAYYDFngemeQEADRINLQKCLGPTCK---ILVLRNHGVVALGDTVEEAFYK 305
Cdd:PRK08333 109 IitPEAELYLKKIPILPF-----RPAGSVELAEQVAEAMKeydAVIMERHGIVTVGRSLREAFYK 168
PRK08660 PRK08660
aldolase;
165-315 3.74e-08

aldolase;


Pssm-ID: 181527 [Multi-domain]  Cd Length: 181  Bit Score: 53.81  E-value: 3.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   165 QDHFLISPKGVSCSEVTASSLIKVNIL--GEVVEKGSSCFPVdttgfclHSAIYAaRPDVRCIIHLHTPATAAVSAMKWG 242
Cdd:PRK08660  30 GDGLLITRTGSMLDEITEGDVIEVGIDddGSVDPLASSETPV-------HRAIYR-RTSAKAIVHAHPPYAVALSLLEDE 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9257192   243 LLPV-SHNALLVGDMAYYDFNGEMEQEADriNLQKCLGPTcKILVLRNHGVVALGDTVEEAFYKIFHLQAACEI 315
Cdd:PRK08660 102 IVPLdSEGLYFLGTIPVVGGDIGSGELAE--NVARALSEH-KGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKV 172
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 509-647 2.74e-05

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 47.28  E-value: 2.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   509 DVKSAGPQSQllasviAEKSRSPSTESQLMSKGDEDTKDDSEET---VPNPFSQLTDQELEEYKKEVERKKL-ELDGEKE 584
Cdd:PRK13108 311 AASAVGPVGP------GEPNQPDDVAEAVKAEVAEVTDEVAAESvvqVADRDGESTPAVEETSEADIEREQPgDLAGQAP 384

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9257192   585 TAPEEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSLEEGTKKTETSKAATTEPETTQPEGV 647
Cdd:PRK13108 385 AAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDGI 447
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 581-665 2.83e-05

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 47.20  E-value: 2.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192    581 GEKETAPEEPGSPAKSAPASPvqSPAKEAETKSPLVSPSKSLEEGTKKTETSKAATTEPETTQPEGVVVNGREEEQTAEE 660
Cdd:TIGR00601  85 APPAATPTSAPTPTPSPPASP--ASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAASTLVVGSERETTIEE 162


                  ....*
gi 9257192    661 ILSKG 665
Cdd:TIGR00601 163 IMEMG 167
PRK05874 PRK05874
L-fuculose-phosphate aldolase; Validated
 167-314 5.93e-05

L-fuculose-phosphate aldolase; Validated


Pssm-ID: 102036 [Multi-domain]  Cd Length: 217  Bit Score: 45.02  E-value: 5.93e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   167 HFLISPKGVSCSEVTASSLIKVNILGEVVEKGSSCFPvdTTGFCLHSAIYAARPDVRCIIHLHtPATAAVSAMKWGLLPV 246
Cdd:PRK05874  39 NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP--STELNLHLACYRAFDDIGSVIHSH-PVWATMFAVAHEPIPA 115

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 9257192   247 SHNALLV---GDMAYYDFNGEMEQEADRINLQKCLGPTCKILVlrNHGVVALGDTVEeafyKIFHLQAACE 314
Cdd:PRK05874 116 CIDEFAIycgGDVRCTEYAASGTPEVGRNAVRALEGRAAALIA--NHGLVAVGPRPD----QVLRVTALVE 180
araD PRK13145
L-ribulose-5-phosphate 4-epimerase; Provisional
 161-304 1.37e-04

L-ribulose-5-phosphate 4-epimerase; Provisional


Pssm-ID: 183870 [Multi-domain]  Cd Length: 234  Bit Score: 44.05  E-value: 1.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   161 VSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVE---KGSSCFPVdttgfclHSAIYAARPDVRCIIHLHTpaTAAVS 237
Cdd:PRK13145  33 VCRELGRIVIKPSGVDYDELTPENMVVTDLDGNVVEgdlNPSSDLPT-------HVELYKAWPEVGGIVHTHS--TEAVG 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   238 AMKWGL-LP---VSHNALLVGD------MAYYDFNGEMEQEADRINLQ----KCLGP-TCKILVLRNHGVVALGDTVEEA 302
Cdd:PRK13145 104 WAQAGRdIPfygTTHADYFYGPipcarsLTKDEVNGAYEKETGSVIIEefekRGLDPmAVPGIVVRNHGPFTWGKNPEQA 183


                 ..
gi 9257192   303 FY 304
Cdd:PRK13145 184 VY 185
araD PRK08193
L-ribulose-5-phosphate 4-epimerase AraD;
161-234 1.51e-04

L-ribulose-5-phosphate 4-epimerase AraD;


Pssm-ID: 236181  Cd Length: 231  Bit Score: 43.67  E-value: 1.51e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 9257192   161 VSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVE---KGSScfpvDT-TgfclHSAIYAARPDVRCIIHLHTP-ATA 234
Cdd:PRK08193  32 IDRERGLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEgklKPSS----DTpT----HLVLYKAFPEIGGIVHTHSRhATA 102
sgaE PRK12348
L-ribulose-5-phosphate 4-epimerase; Reviewed
 141-304 2.34e-04

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183460  Cd Length: 228  Bit Score: 43.25  E-value: 2.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   141 YRLLdLYGWAQLSDtyvtlrVSKEQDHFLISPKGVSCSEVTASSLIKVNILGEVVE---KGSScfpvDTTgfcLHSAIYA 217
Cdd:PRK12348  18 YGLV-TFTWGNVSA------IDRERGLVVIKPSGVAYETMKADDMVVVDMSGKVVEgeyRPSS----DTA---THLELYR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   218 ARPDVRCIIHLHTP-ATA-AVSAMKWGLLPVSHNALLVGD------MAYYDFNGEMEQEADRINLQKcLGPTCKI----L 285
Cdd:PRK12348  84 RYPSLGGIVHTHSThATAwAQAGLAIPALGTTHADYFFGDipctrgLSEEEVQGEYELNTGKVIIET-LGNAEPLhtpgI 162

                        170
                 ....*....|....*....
gi 9257192   286 VLRNHGVVALGDTVEEAFY 304
Cdd:PRK12348 163 VVYQHGPFAWGKDAHDAVH 181
PRK08087 PRK08087
L-fuculose-phosphate aldolase;
165-319 5.30e-04

L-fuculose-phosphate aldolase;


Pssm-ID: 181226 [Multi-domain]  Cd Length: 215  Bit Score: 42.03  E-value: 5.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   165 QDHFLISPKGVSCSEVTASSLIKVNILGEVvEKGSscFPVDTTGFclHSAIYAARPDVRCIIHLHTPATAAVSAMKWGlL 244
Cdd:PRK08087  35 QDGMLITPTGIPYEKLTESHIVFVDGNGKH-EEGK--LPSSEWRF--HMAAYQTRPDANAVVHNHAVHCTAVSILNRP-I 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9257192   245 PVSHNALLV--GD----MAYYDFNGEMEQEADRINLQKclgptCKILVLRNHGVVALGDTVEEAfykifhLQAACEIQVS 318
Cdd:PRK08087 109 PAIHYMIAAagGNsipcAPYATFGTRELSEHVALALKN-----RKATLLQHHGLIACEVNLEKA------LWLAHEVEVL 177


                 .
gi 9257192   319 A 319
Cdd:PRK08087 178 A 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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