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Conserved domains on  [gi|68342030|ref|NP_001794|]
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CAMPATH-1 antigen precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CD52 super family cl20985
CAMPATH-1 antigen;
43-61 4.40e-03

CAMPATH-1 antigen;


The actual alignment was detected with superfamily member pfam15116:

Pssm-ID: 464513  Cd Length: 41  Bit Score: 31.32  E-value: 4.40e-03
                         10
                 ....*....|....*....
gi 68342030   43 GGIFLFFVANAIIHLFCFS 61
Cdd:pfam15116 23 GGSFLFFLANTLIQLFYLS 41
 
Name Accession Description Interval E-value
CD52 pfam15116
CAMPATH-1 antigen;
43-61 4.40e-03

CAMPATH-1 antigen;


Pssm-ID: 464513  Cd Length: 41  Bit Score: 31.32  E-value: 4.40e-03
                         10
                 ....*....|....*....
gi 68342030   43 GGIFLFFVANAIIHLFCFS 61
Cdd:pfam15116 23 GGSFLFFLANTLIQLFYLS 41
 
Name Accession Description Interval E-value
CD52 pfam15116
CAMPATH-1 antigen;
43-61 4.40e-03

CAMPATH-1 antigen;


Pssm-ID: 464513  Cd Length: 41  Bit Score: 31.32  E-value: 4.40e-03
                         10
                 ....*....|....*....
gi 68342030   43 GGIFLFFVANAIIHLFCFS 61
Cdd:pfam15116 23 GGSFLFFLANTLIQLFYLS 41
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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