NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|398366553|ref|NP_010675|]
View 

Cin10p [Saccharomyces cerevisiae S288C]

Protein Classification

sugar porter family MFS transporter( domain architecture ID 13024225)

sugar porter family major facilitator superfamily (MFS) transporter belonging to the SLC2A13 subfamily functions as a myo-inositol/H+ symporter or inositol/H+ symporter

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.1.1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
45-528 9.66e-152

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 439.40  E-value: 9.66e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  45 GATIGGLLFGYDTGVISGVLLSLKPeDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAA 124
Cdd:cd17360    1 FAGIGGFLFGYDTGVISGALLYIKD-DLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 125 IGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFA 204
Cdd:cd17360   80 IVMAAAPNKEVLIVGRVLVGLGVGIASMTVPLYIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYLPGGWRWMLG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 205 LSAIPAILFLSILDFIPESPRWsiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqsvi 284
Cdd:cd17360  160 LAAVPAVLQFIGLLFLPESPRW---------------------------------------------------------- 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 285 rymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmePRTIRALIVGCMLMFFQQIT 364
Cdd:cd17360  182 ------------------------------------------------------------PSTRRALIVGCGLQAFQQFS 201
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 365 GFNAFMYYAAIIFSKFNIK---NPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSvgfghdqVNL 441
Cdd:cd17360  202 GINTVMYYSATILQMAGFKdnqNAIWLSLIVAGTNFIFTIVGMYLIDKFGRRKLLLISLFGVIVALVVLA-------VWL 274
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 442 LLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWF 520
Cdd:cd17360  275 ALVGLILYLAFFAPGMGPVPWTVNsEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLTQAIGPYGTFLLFAGLAVLGLI 354

                 ....*...
gi 398366553 521 FVYFWYPE 528
Cdd:cd17360  355 FIYFCVPE 362
 
Name Accession Description Interval E-value
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
45-528 9.66e-152

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 439.40  E-value: 9.66e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  45 GATIGGLLFGYDTGVISGVLLSLKPeDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAA 124
Cdd:cd17360    1 FAGIGGFLFGYDTGVISGALLYIKD-DLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 125 IGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFA 204
Cdd:cd17360   80 IVMAAAPNKEVLIVGRVLVGLGVGIASMTVPLYIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYLPGGWRWMLG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 205 LSAIPAILFLSILDFIPESPRWsiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqsvi 284
Cdd:cd17360  160 LAAVPAVLQFIGLLFLPESPRW---------------------------------------------------------- 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 285 rymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmePRTIRALIVGCMLMFFQQIT 364
Cdd:cd17360  182 ------------------------------------------------------------PSTRRALIVGCGLQAFQQFS 201
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 365 GFNAFMYYAAIIFSKFNIK---NPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSvgfghdqVNL 441
Cdd:cd17360  202 GINTVMYYSATILQMAGFKdnqNAIWLSLIVAGTNFIFTIVGMYLIDKFGRRKLLLISLFGVIVALVVLA-------VWL 274
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 442 LLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWF 520
Cdd:cd17360  275 ALVGLILYLAFFAPGMGPVPWTVNsEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLTQAIGPYGTFLLFAGLAVLGLI 354

                 ....*...
gi 398366553 521 FVYFWYPE 528
Cdd:cd17360  355 FIYFCVPE 362
Sugar_tr pfam00083
Sugar (and other) transporter;
46-541 3.55e-85

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 271.45  E-value: 3.55e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   46 ATIGGLLFGYDTGVISGVLLSLK-------PEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCS 118
Cdd:pfam00083   5 AALGGFLFGYDTGVIGAFLTLIDffknfglSKSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  119 IFILAAIGMAIA---RTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEI 195
Cdd:pfam00083  85 LFVIGAVLQGAAkgkWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSLYQLAITFGILLAYIFGLGLNKT 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  196 DNS--WRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTAStyhVNSKIKQLIIELDKLRLYEDAS 273
Cdd:pfam00083 165 SNSdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAREVLAKLRGVPD---VDRELDEIKDSLEAGQEAEKAS 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  274 EPLLVQSQSVirymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtIRALIV 353
Cdd:pfam00083 242 WKELFSTKTR----------------------------------------------------------------RQRLLI 257
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  354 GCMLMFFQQITGFNAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLL-LCSV 432
Cdd:pfam00083 258 GVMLQIFQQLTGINAIFYYSTTIFENLGLSDSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFViLGIV 337
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  433 GFG-----HDQVNLLLISVVIYVAAYASAMGSVPW-TCVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDEN 506
Cdd:pfam00083 338 ALLgvsksDWAGIVAIVFIALFIAFFAMGWGPVPWvIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITDAIGLGY 417
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 398366553  507 TMLIFAFFTVCAWFFVYFWYPEVKGLSLEEVGRVF 541
Cdd:pfam00083 418 TFFIFAGLLVLFIIFVFFFVPETKGRTLEEIDELF 452
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
46-537 5.42e-77

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 251.10  E-value: 5.42e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   46 ATIGGLLFGYDTGVISGVLLSLKPE----DLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFI 121
Cdd:TIGR00879  33 AAIGGLMFGYDTGVIGGALALPAFEfkftSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFV 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  122 LAAIGMAIARTLTF---LICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNS 198
Cdd:TIGR00879 113 IGAILMGLAAFALSvemLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  199 --WRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHvnskikqliIELDKLRLYEDASEPL 276
Cdd:TIGR00879 193 lgWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDK---------ELLDELELIDIKRSIE 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  277 LVQSQSvirymdsstsgtlsppnikrlSSNTERTSNTmssssaylsalrgpapngalasnkkkrhrmepRTIRALIVGCM 356
Cdd:TIGR00879 264 KRSVQP---------------------SWGSLFSSTR--------------------------------RIRRRLFLGVV 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  357 LMFFQQITGFNAFMYYAAIIFSKFNIKN--PLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLL---CS 431
Cdd:TIGR00879 291 LQWFQQFTGINAIMYYSPTIFENAGVSTdhAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVlgiLG 370
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  432 VGFGHDQV----NLLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDEN 506
Cdd:TIGR00879 371 ASFVTGSSkssgNVAIVFILLFIAFFAMGWGPVPWViVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGG 450
                         490       500       510
                  ....*....|....*....|....*....|.
gi 398366553  507 TMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:TIGR00879 451 VFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
xylE PRK10077
D-xylose transporter XylE; Provisional
46-537 1.29e-54

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 191.83  E-value: 1.29e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLK-----PEDLSLVvLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:PRK10077  17 ATLGGLLFGYDTAVISGTVESLNtvfvaPQNLSES-AANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLF 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMA-------------IARTLTFLICgRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQL---- 183
Cdd:PRK10077  96 FISALGSAwpefgftsigpdnTGYVPEFVIY-RIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLvvyf 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 184 VSYVIA---SLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHVNSKIKQLI 260
Cdd:PRK10077 175 VNYFIArsgDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSL 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 261 IELDKlrlyedASEPLLVQSQSVIrymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkr 340
Cdd:PRK10077 255 DHGRK------TGGKLLMFGVGVI-------------------------------------------------------- 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 341 hrmeprtiralIVGCMLMFFQQITGFNAFMYYAAIIFSKFNIK--NPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLR 418
Cdd:PRK10077 273 -----------VIGVMLSVFQQFVGINVVLYYAPEIFKTLGAStdIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 419 TILIMTVGLLLCSVGFGHDQVNLL-LISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTY- 495
Cdd:PRK10077 342 GALGMAIGMFSLGTAFYTQAPGIVaLLSMLFYVAAFAMSWGPVCWVLLsEIFPNAIRGKALAIAVAAQWIANYFVSWTFp 421
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*..
gi 398366553 496 -----LSTINTIGDENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:PRK10077 422 mmdknSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEM 468
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
41-226 1.40e-24

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 103.74  E-value: 1.40e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  41 LIFVGATIGGLLFGYDTGVISGVLLSLkPEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:COG0477   14 RALLALALGTFLEGLDFTIVNVALPSI-AADLGA---SSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWR 200
Cdd:COG0477   90 GLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAAL-GWR 168
                        170       180
                 ....*....|....*....|....*.
gi 398366553 201 YLFALSAIPAILFLSILDFIPESPRW 226
Cdd:COG0477  169 WIFLINAPLGLLALVLRLRLPESRGL 194
 
Name Accession Description Interval E-value
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
45-528 9.66e-152

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 439.40  E-value: 9.66e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  45 GATIGGLLFGYDTGVISGVLLSLKPeDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAA 124
Cdd:cd17360    1 FAGIGGFLFGYDTGVISGALLYIKD-DLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 125 IGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFA 204
Cdd:cd17360   80 IVMAAAPNKEVLIVGRVLVGLGVGIASMTVPLYIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYLPGGWRWMLG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 205 LSAIPAILFLSILDFIPESPRWsiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqsvi 284
Cdd:cd17360  160 LAAVPAVLQFIGLLFLPESPRW---------------------------------------------------------- 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 285 rymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmePRTIRALIVGCMLMFFQQIT 364
Cdd:cd17360  182 ------------------------------------------------------------PSTRRALIVGCGLQAFQQFS 201
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 365 GFNAFMYYAAIIFSKFNIK---NPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSvgfghdqVNL 441
Cdd:cd17360  202 GINTVMYYSATILQMAGFKdnqNAIWLSLIVAGTNFIFTIVGMYLIDKFGRRKLLLISLFGVIVALVVLA-------VWL 274
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 442 LLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWF 520
Cdd:cd17360  275 ALVGLILYLAFFAPGMGPVPWTVNsEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLTQAIGPYGTFLLFAGLAVLGLI 354

                 ....*...
gi 398366553 521 FVYFWYPE 528
Cdd:cd17360  355 FIYFCVPE 362
Sugar_tr pfam00083
Sugar (and other) transporter;
46-541 3.55e-85

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 271.45  E-value: 3.55e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   46 ATIGGLLFGYDTGVISGVLLSLK-------PEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCS 118
Cdd:pfam00083   5 AALGGFLFGYDTGVIGAFLTLIDffknfglSKSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  119 IFILAAIGMAIA---RTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEI 195
Cdd:pfam00083  85 LFVIGAVLQGAAkgkWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSLYQLAITFGILLAYIFGLGLNKT 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  196 DNS--WRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTAStyhVNSKIKQLIIELDKLRLYEDAS 273
Cdd:pfam00083 165 SNSdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLEEAREVLAKLRGVPD---VDRELDEIKDSLEAGQEAEKAS 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  274 EPLLVQSQSVirymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtIRALIV 353
Cdd:pfam00083 242 WKELFSTKTR----------------------------------------------------------------RQRLLI 257
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  354 GCMLMFFQQITGFNAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLL-LCSV 432
Cdd:pfam00083 258 GVMLQIFQQLTGINAIFYYSTTIFENLGLSDSFLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFViLGIV 337
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  433 GFG-----HDQVNLLLISVVIYVAAYASAMGSVPW-TCVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDEN 506
Cdd:pfam00083 338 ALLgvsksDWAGIVAIVFIALFIAFFAMGWGPVPWvIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITDAIGLGY 417
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 398366553  507 TMLIFAFFTVCAWFFVYFWYPEVKGLSLEEVGRVF 541
Cdd:pfam00083 418 TFFIFAGLLVLFIIFVFFFVPETKGRTLEEIDELF 452
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
46-528 2.15e-79

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 253.65  E-value: 2.15e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEdlSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17315    2 AALGGLLFGYDLGVINGALLYIAKD--LGFGLSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGAL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEID-NSWRYLFA 204
Cdd:cd17315   80 LSALAPNVWVLIVGRFLLGLGVGLASVLVPLYISEIAPAKIRGALGTLNQLMITFGILLAYLLGLALSLSPpGWWRLMFA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 205 LSAIPAILFLSILDFIPESprwsiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqsvi 284
Cdd:cd17315  160 LAAVPALLQLLLMFFLPES------------------------------------------------------------- 178
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 285 rymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiRALIVGCMLMFFQQIT 364
Cdd:cd17315  179 ----------------------------------------------------------------RALLVGVGLQLLQQLT 194
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 365 GFNAFMYYAAIIFSKF-NIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSVGF-----GHDQ 438
Cdd:cd17315  195 GINAVMYYAPTIFKSAgGGTASILASIIVGVVNLLATLVAIRLVDKVGRRPLLLIGFAGMAASLLLLAIAFllpalAKAA 274
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 439 VNLLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVC 517
Cdd:cd17315  275 GWLALLGILLYIAAFAMGAGPVPWLlLSEIFPLRIRGKGMAIATLVNWIFNFIVGLTFLIMVSTIGLAGVFIFFAAVCLL 354
                        490
                 ....*....|.
gi 398366553 518 AWFFVYFWYPE 528
Cdd:cd17315  355 ALVFVFFFVPE 365
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
46-537 5.42e-77

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 251.10  E-value: 5.42e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   46 ATIGGLLFGYDTGVISGVLLSLKPE----DLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFI 121
Cdd:TIGR00879  33 AAIGGLMFGYDTGVIGGALALPAFEfkftSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFV 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  122 LAAIGMAIARTLTF---LICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNS 198
Cdd:TIGR00879 113 IGAILMGLAAFALSvemLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  199 --WRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHvnskikqliIELDKLRLYEDASEPL 276
Cdd:TIGR00879 193 lgWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDK---------ELLDELELIDIKRSIE 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  277 LVQSQSvirymdsstsgtlsppnikrlSSNTERTSNTmssssaylsalrgpapngalasnkkkrhrmepRTIRALIVGCM 356
Cdd:TIGR00879 264 KRSVQP---------------------SWGSLFSSTR--------------------------------RIRRRLFLGVV 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  357 LMFFQQITGFNAFMYYAAIIFSKFNIKN--PLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLL---CS 431
Cdd:TIGR00879 291 LQWFQQFTGINAIMYYSPTIFENAGVSTdhAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVlgiLG 370
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  432 VGFGHDQV----NLLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDEN 506
Cdd:TIGR00879 371 ASFVTGSSkssgNVAIVFILLFIAFFAMGWGPVPWViVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGG 450
                         490       500       510
                  ....*....|....*....|....*....|.
gi 398366553  507 TMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:TIGR00879 451 VFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
41-528 8.54e-77

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 247.48  E-value: 8.54e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  41 LIFVGATIGGLLFGYDTGVISGVLLSLKpedlSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:cd17359    1 LISLVAALGGLLFGYDTGVINGALPFLQ----TDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLF 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYV----IASLMKE-- 194
Cdd:cd17359   77 FISALGSAFSPNFTIFIIARIIGGLAVGGASALVPMYIAEVAPAEIRGRLVSLNQLMIVFGQLLAYIvnylIANAGGAdw 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 195 -IDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDilytrdslrmlyptastyhvnskikqliieldklrlyedas 273
Cdd:cd17359  157 lGAEGWRWMLGLEAIPAILFLLGMLFIPESPRWLVSKGK----------------------------------------- 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 274 epllvqsqsvirymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiRALIV 353
Cdd:cd17359  196 ---------------------------------------------------------------------------PILII 200
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 354 GCMLMFFQQITGFNAFMYYAAIIFSK--FNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCS 431
Cdd:cd17359  201 GIGLAIFQQFVGINVIFYYGPEIFQNagFSENAALLQTIGIGVVNVIFTIIAILLVDKVGRKPLLLIGSIGMAISLLLIG 280
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 432 VGF-----GHDQVNLLLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDE 505
Cdd:cd17359  281 TAFyfapgSQASGIVALVLILLFVAFFAMSWGPVTWVLLsEIFPNRIRGLAMGIAVFFLWIANFLVSLTFPILLAAFGLA 360
                        490       500
                 ....*....|....*....|...
gi 398366553 506 NTMLIFAFFTVCAWFFVYFWYPE 528
Cdd:cd17359  361 FTFLIFAVICVLAFLFVWKFVPE 383
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
46-537 2.37e-68

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 225.69  E-value: 2.37e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEDLSLVV---LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFIL 122
Cdd:cd17362    2 PALGGLLFGYDIGATSGALLSITSPALSGTDwynLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 123 AAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYL 202
Cdd:cd17362   82 GSLVTGLAPSYPVLLVGRLIYGVGIGLAMHAAPVYIAETSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADVVGGWRYM 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 203 FALSAIPAILFLSILDFIPESPRWsiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqs 282
Cdd:cd17362  162 YGLAAPPALLLGIGMWFLPPSPRW-------------------------------------------------------- 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 283 virymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmEPRTIRALIVGCMLMFFQQ 362
Cdd:cd17362  186 -------------------------------------------------------------QGNYRKPLIIGLGLVLFQQ 204
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 363 ITGFNAFMYYAAIIFSKFNI---KNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSV--GFGHD 437
Cdd:cd17362  205 ITGQPSVLYYAATIFKSAGFsaaSDATLVSVGLGVFKLLMTIVAVLLVDKLGRRPLLLGGVSGMVVSLFLLAAynLFVQM 284
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 438 QVNLL----LISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFA 512
Cdd:cd17362  285 GPAGLawlsLVALLLYVGAYQISFGPISWLMVsEIFPLRVRGRAIALAVLVNFGSNALVSLAFLPLQELIGLPGTFLGFG 364
                        490       500
                 ....*....|....*....|....*
gi 398366553 513 FFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:cd17362  365 VIGVLALLFIYFTVPETKGLSLEEI 389
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
46-536 1.12e-65

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 220.14  E-value: 1.12e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17358    7 ANLGSFSFGIAVGWSSPALPSLMSDNSLSLPLTVAQFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMkeidnSWRYLFAL 205
Cdd:cd17358   87 LIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFL-----PWRTLALI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 206 SAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLyptastyhvnskikqliieldklrlyedasepllvqsqsviR 285
Cdd:cd17358  162 GAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQFL-----------------------------------------R 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 286 YMDSSTSGTLspPNIKRLSSNTERTSNTMSSSSAYlsalrgpapngalasnkkkrhrmEPRTIRALIVGCMLMFFQQITG 365
Cdd:cd17358  201 GKDADISKEA--AEIQEELAELEKEAKESSFSDLF-----------------------QRKYLKPLVIGLGLMLFQQLSG 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 366 FNAFMYYAAIIFSKFNI-KNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSVGFGHDQVNLL-- 442
Cdd:cd17358  256 INAVIFYASSIFDEAGSgLDPNTATIIIGVVQVVGTLVATLLVDRLGRRPLLLVSAIGMGIGLLALGLYFYLQEHGALls 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 443 ------LISVVIYVAAYASAMGSVPWTC-VEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFT 515
Cdd:cd17358  336 svswlpLVGLVIYIISFSIGLGPLPWVImSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTFPFLTLAWGASGTFWIFAGIC 415
                        490       500
                 ....*....|....*....|.
gi 398366553 516 VCAWFFVYFWYPEVKGLSLEE 536
Cdd:cd17358  416 GLALVFVLLFVPETKGKSLEE 436
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
46-541 3.38e-55

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 191.31  E-value: 3.38e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVL-----LSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:cd17356    6 VSLGGFLFGYDTGSISGILnmksfQKYFADNTGTYYPSSSRQGLIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIY 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 IL-AAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNS- 198
Cdd:cd17356   86 IIgAIIQVAAIGKWYQLIVGRIIAGLGVGFASVLVPVYQSEVAPKHIRGTLVSLYQLAITIGILVAYCINYGTHKLDGSa 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 199 -WRYLFALSAIPAILFLSILDFIPESPRWsiskgdilytrdslrmLYPTastyhvnskikqliieldklrlyedasepll 277
Cdd:cd17356  166 qWRIPLGLQIVWGLLLLIGMFFLPESPRW----------------LYRT------------------------------- 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 278 vqsqsvirymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiralIVGCML 357
Cdd:cd17356  199 --------------------------------------------------------------------------ILGIML 204
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 358 MFFQQITGFNAFMYYAAIIFSK--FNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILL-----RTILIMTVGLLLC 430
Cdd:cd17356  205 QLFQQLTGINYFFYYGTTIFQStgLTGSSPLLTSIILYIVNFVSTIPGLFFVDKFGRRTCLLigaagMSICLFIYAAVGV 284
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 431 SVGFGHDQ--------VNLLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINT 501
Cdd:cd17356  285 RYLIPNPQsgtsnksaGNGMIVFICLFIFSFATTWGPIAWVyVAEVFPLRVRSKGMALATAFNWLWNFLISFFTPFIIGS 364
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|
gi 398366553 502 IGdENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEVGRVF 541
Cdd:cd17356  365 IG-FKYYYIFAGCNLLAFIVVFFFVPETKGLTLEEIDELF 403
xylE PRK10077
D-xylose transporter XylE; Provisional
46-537 1.29e-54

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 191.83  E-value: 1.29e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLK-----PEDLSLVvLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:PRK10077  17 ATLGGLLFGYDTAVISGTVESLNtvfvaPQNLSES-AANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLF 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMA-------------IARTLTFLICgRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQL---- 183
Cdd:PRK10077  96 FISALGSAwpefgftsigpdnTGYVPEFVIY-RIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLvvyf 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 184 VSYVIA---SLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHVNSKIKQLI 260
Cdd:PRK10077 175 VNYFIArsgDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSL 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 261 IELDKlrlyedASEPLLVQSQSVIrymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkr 340
Cdd:PRK10077 255 DHGRK------TGGKLLMFGVGVI-------------------------------------------------------- 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 341 hrmeprtiralIVGCMLMFFQQITGFNAFMYYAAIIFSKFNIK--NPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLR 418
Cdd:PRK10077 273 -----------VIGVMLSVFQQFVGINVVLYYAPEIFKTLGAStdIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 419 TILIMTVGLLLCSVGFGHDQVNLL-LISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTY- 495
Cdd:PRK10077 342 GALGMAIGMFSLGTAFYTQAPGIVaLLSMLFYVAAFAMSWGPVCWVLLsEIFPNAIRGKALAIAVAAQWIANYFVSWTFp 421
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*..
gi 398366553 496 -----LSTINTIGDENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:PRK10077 422 mmdknSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEM 468
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
46-537 3.69e-50

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 177.21  E-value: 3.69e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKpEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17437    2 ASLNSILLGYDIGVMSGAVIFIK-EDLKI---SDVQEEVLIGSLNIISLVGSLAAGRTSDWIGRRYTIALAALIFFVGAL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDN--SWRYLF 203
Cdd:cd17437   78 LMGVAPNYPVLMVGRFVAGIGVGFALMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYAFSGLPLhvGWRLML 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 204 ALSAIPAILFLSILDFIPESPRWSiskgdilytrdslrmlyptastyhvnskikqliieldklrlyedasepllvqsqSV 283
Cdd:cd17437  158 GVGAVPSLFLAIGVLAMPESPRWT------------------------------------------------------PA 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 284 IRYMdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiraLIVGCMLMFFQQI 363
Cdd:cd17437  184 VRRM---------------------------------------------------------------LIAALGIHFFQQA 200
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 364 TGFNAFMYYAAIIFSKFNIKNP---LLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSVGFGHDQVN 440
Cdd:cd17437  201 SGIDAVVLYSPRIFKKAGIKSKdklLLATVAVGVTKTLFILVATFLLDKVGRRPLLLTSTGGMTLSLTALATSLTFIDRN 280
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 441 ---------LLLISVVIYVAAYASAMGSVPWT-CVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLI 510
Cdd:cd17437  281 gggltwalvLAITAVCSFVAFFSIGAGPITWVySSEIFPLRLRAQGASLGVVVNRLMSGTVSMTFLSMSKAITTGGTFFL 360
                        490       500
                 ....*....|....*....|....*..
gi 398366553 511 FAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:cd17437  361 FAGVAAAAWVFFYFFLPETKGKSLEEI 387
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
43-531 2.73e-47

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 170.91  E-value: 2.73e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  43 FVGATIGGLLFGYDTGVI---SGV--------LLSLKPEDLSLVVLtDVQKELITSSTSVGSFFGSILAFPLADRYGRRI 111
Cdd:cd17357    2 VIVAFGGSFQFGYNIGVVnapQEVfkefindtLVDRYGLNLSDSEL-DLLWSLIVSIFFIGGAIGSFISAFLANRFGRKN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 112 TLAICCSIFILAAIGMAIARTLTF---LICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVI 188
Cdd:cd17357   81 GLLISNALLVVSSLLMFLSKSAKSpelLIFGRFLVGIACGLSTGFVPMYLQEISPSELRGALGSLTQIGVTLGILLGQVF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 189 AslMKEID---NSWRYLFALSAIPAILFLSILDFIPESPRW-SISKGDILYTRDSLRMLYPtastyhvnskikqliielD 264
Cdd:cd17357  161 G--LPSVLgteTLWPYLLFFPGIPALLQLAALPFFPESPKFlLISKGDEEEAEKSLKFLRG------------------I 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 265 KLRLYEDASEpllvqsqsvirymdsstsgtlsppNIKRLSSNTERTSNTMSSssaylsalrgpapngaLASNKKKRhrme 344
Cdd:cd17357  221 EDDVDQELEE------------------------IKKESEQMGDQKQVSLMQ----------------LLRDPSLR---- 256
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 345 prtiRALIVGCMLMFFQQITGFNAFMYYAAIIFSK--FNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILI 422
Cdd:cd17357  257 ----LPLLLVLVVSASQQFSGINAIFFYSTFIFENagFSPQLAEWANLGIGIVNVLSTIVGPFLIEKVGRRPLLLISLSV 332
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 423 MTVGLLLCSVG-----FGHDQVNLLLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYL 496
Cdd:cd17357  333 CAVALLLMSVFlflseQNSWMSYGCIVAIFLFIFFFAIGLGPIPWFIGaELFPQAPRSAAQSLGSSVNWTSNFIVGMAFP 412
                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 398366553 497 STINTIGdentMLIFAFFTV-CAWFFVYFWY--PEVKG 531
Cdd:cd17357  413 PLQSIGG----GFVFIIFAIpCALFLLYLYRylPETKG 446
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
45-531 6.66e-46

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 167.13  E-value: 6.66e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  45 GATIGGLLFGYDTGVIS-----------GVLLSLKPEDLSLVVLTDVQkELITSSTSVGSFFGSILAFPLADRYGRRITL 113
Cdd:cd17431    5 VAVLGSLQFGYNTGVINapqkvieefynKTLGDRYGEPISPETLTTLW-SLSVAIFSVGGMIGSFSVGLFVNRFGRRNSM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 114 AICCSIFILAAIGMAIARTLTF---LICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIA- 189
Cdd:cd17431   84 LYNNLLAFAGAALMGLSKLAKSyemLILGRFIIGLYCGLTTGLVPMYIGEISPTALRGALGTLHQLGIVVGILISQIFGl 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 190 -SLMKEiDNSWRYLFALSAIPAILFLSILDFIPESPRWS-ISKGDILYTRDSLRMLYPTASTYHVNSKIKQliieldklr 267
Cdd:cd17431  164 eFILGT-EELWPLLLGFTIVPAILQLALLPFCPESPRYLlINRNEEEEAKSVLKKLRGTTDVSEDIQEMKE--------- 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 268 lyedasEPLLVQSQSVIRYMDSSTSGTLSPPnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprt 347
Cdd:cd17431  234 ------ESRQMMREKKVTILELFRSSSYRQP------------------------------------------------- 258
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 348 iraLIVGCMLMFFQQITGFNAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTI------- 420
Cdd:cd17431  259 ---IIIAIVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGAGVVNTIFTVVSLFLVERAGRRTLHLIGLggmaica 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 421 LIMTVGLLLCSVGFGHDQVNllLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLStI 499
Cdd:cd17431  336 ILMTIALLLLEGYPWMSYVS--IVAIFGFVAFFEIGPGPIPWFIVaELFSQGPRPAAMAVAGFSNWTSNFIVGMCFQY-I 412
                        490       500       510
                 ....*....|....*....|....*....|..
gi 398366553 500 NTIGDENTMLIFAFFTVCAWFFVYFWYPEVKG 531
Cdd:cd17431  413 ANLCGPYVFIIFTVFLLTFFIFTYFKVPETKG 444
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
46-536 1.83e-42

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 156.96  E-value: 1.83e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17433    7 AVLGPLSFGFVLGYSSPAIPSLQRIADPALRLDDAAASWFGSVVTLGAAAGGVLGGWIVDRAGRKLSLMLCSVPFIAGFT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKeidnsWRYLFAL 205
Cdd:cd17433   87 VITAAQNVWMLYVGRLLTGLASGVTSLVVPVYISEIAHPRVRGTLGSCVQLMVVIGIMGAYLAGLVLD-----WRWLAVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 206 SAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHvnskikqliielDKLRLYEDASepllvqsqsvir 285
Cdd:cd17433  162 GSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMAALRFLRGPDQGWE------------WECIGIEQSF------------ 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 286 ymdSSTSGTLSPPNIKrlssntertsntmssssaylsalrgpapngalasnkkkrhrmEPRTIRALIVGCMLMFFQQITG 365
Cdd:cd17433  218 ---HLEEQSFSLALLK------------------------------------------QPGIYKPLIIGVSLMAFQQLTG 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 366 FNAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGlllcSVGFGHdqvnLLLIS 445
Cdd:cd17433  253 INAVMFYAETIFEEAKFKDSSVASVIVAAIQVLFTAVAALIMDRAGRKVLLVLSGVVMVFS----TAAFGW----LAVGS 324
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 446 VVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWFFVYF 524
Cdd:cd17433  325 MGFFIAGFAVGWGPIPWLVMsEIFPLHVRGVASGICVLTNWLMAFLVTKEFSSLMEVLSSYGTFWLFSAFCAFSVLFTLF 404
                        490
                 ....*....|..
gi 398366553 525 WYPEVKGLSLEE 536
Cdd:cd17433  405 CVPETKGKTLEQ 416
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
46-528 3.10e-36

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 139.31  E-value: 3.10e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLlSLKP--EDL--SLVVLTDVQKE------------LITSSTSVGSFFGSILAFPLADRYGR 109
Cdd:cd17361    2 AALGGLIFGYDIGISGGVT-SMDPflEKFfpSVYEKKKGASEnnyckyddqllqLFTSSLYLAGLVASLLASYVTRKWGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 110 RITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIA 189
Cdd:cd17361   81 KPSMLIGGVLFLVGAALNAAAQNIAMLIVGRILLGFGVGFGNQAVPLYLSEMAPAKLRGALNIGFQLAITIGILIANLIN 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 190 -SLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRwsiskgdilytrdslrmlyptastyhvnskikqliieldklrl 268
Cdd:cd17361  161 yGTSKIKPNGWRLSLGLAAVPALILLLGSLFLPETPN------------------------------------------- 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 269 yedasepllvqsqsvirymdsstsgtlSPPnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprti 348
Cdd:cd17361  198 ---------------------------SPQ-------------------------------------------------- 200
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 349 raLIVGCMLMFFQQITGFNAFMYYAAIIFSK--FNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIM--- 423
Cdd:cd17361  201 --LVIAILIPFFQQLTGINVIMFYAPVLFQTlgFGSDASLISAVITGAVNVVSTLVSIYLVDRFGRRFLLLEGGVQMlas 278
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 424 --TVGLLLcSVGFGHDQV------NLLLISVVIYVAAYASAMGSVPWTC-VEFLPLNRRSFGASCIACTNWLTNAFVSMT 494
Cdd:cd17361  279 qvAIGILL-AVKFGDGGElpkayaIAVVVLICLYVAAFAWSWGPLGWLVpSEIFPLETRSAGQSLTVAVNFLFTFVIAQA 357
                        490       500       510
                 ....*....|....*....|....*....|....
gi 398366553 495 YLSTINTIgDENTMLIFAFFTVCAWFFVYFWYPE 528
Cdd:cd17361  358 FLSMLCAM-KFGIFLFFAGWVVVMSLFVYFLLPE 390
MFS_GLUT12_Class3 cd17435
Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
44-537 9.34e-36

Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 12 (GLUT12) is also called Solute carrier family 2, facilitated glucose transporter member 12 (SLC2A12). It is a facilitative glucose transporter, classified as a Class 3 GLUT, and is expressed in the heart, skeletal muscle, prostate, and small intestine, and is highly upregulated in breast ductal cell carcinoma. It plays a role as a secondary insulin-sensitive glucose transporter in insulin-dependent tissues. The GLUT12 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340993 [Multi-domain]  Cd Length: 376  Bit Score: 137.62  E-value: 9.34e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  44 VGATIGGLLFGYDTGVISGVLLSLKpedlSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILA 123
Cdd:cd17435    4 VTAAVSGLLVGYELGIISGALLQLR----TLLALSCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILTSCLLVLG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 124 AIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLF 203
Cdd:cd17435   80 SLLLVCSVSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILLAYISNYAFANVSNGWKYMF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 204 ALSAIPAILFLSILDFIPESPRWsiskgdiLYTRDSLRmlyptastyhvnskikqliieldklrlyedasepllvqsqsv 283
Cdd:cd17435  160 GLVIPLAALQAIAMYFLPPSPRF-------LVMKDNMR------------------------------------------ 190
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 284 irymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiRALIVGCMLMFFQQI 363
Cdd:cd17435  191 -----------------------------------------------------------------ARLLIGLTLVFFVQI 205
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 364 TGFNAFMYYAAIIFSKFNIKNPllPPILIASTNF-----IFTFFAMYTMDSLGRRAILLRTILIMTVGLLlcSVGfghdq 438
Cdd:cd17435  206 TGQPNILFYASTVLKSVGFQSN--EAASLASTGVgvvkvVSTIPAIFLVDKVGSKTFLCIGSSVMAVSLV--TMG----- 276
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 439 VNLLLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVC 517
Cdd:cd17435  277 LWLSLASLLVYVAAFSIGLGPMPWLVLsEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTELIGLPWVCFIYTAMSLA 356
                        490       500
                 ....*....|....*....|
gi 398366553 518 AWFFVYFWYPEVKGLSLEEV 537
Cdd:cd17435  357 SLVFVIMFVPETKGCSLEQI 376
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
46-537 6.18e-34

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 132.62  E-value: 6.18e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17436    6 SLLGGLTFGYELGIISGALLQLQTD----FSLSCFEQEALVSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFAL 205
Cdd:cd17436   82 ILTLAGSFFWLVIGRAVVGFAISVSSMACCIYVSEMVTPHQRGLLVSLYEAGITVGILISYALNYFFSNVLTGWRYMFGL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 206 SAIPAILFLSILDFIPesprwsiSKGDILYTRDSLRmlyptastyhvnskikqliieldklrlyedasepllvqsqsvir 285
Cdd:cd17436  162 AIIPAAIQFASILLLP-------KKPEVLNIKDNMR-------------------------------------------- 190
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 286 ymdsstsgtlsppnikrlssntertsntmssssaylsalrgpapngalasnkkkrhrmeprtiRALIVGCMLMFFQQITG 365
Cdd:cd17436  191 ---------------------------------------------------------------RRTLVGLGLVLFQQFTG 207
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 366 FNAFMYYAAIIFSKFNIKN---PLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLcsVGFGhdqvnLL 442
Cdd:cd17436  208 QPNVLCYASTIFRSVGFQSnssAVLASVGLGVVKVIATLLAMLFADRAGRRSLLIAGCSVMAVSVSG--IGLW-----IT 280
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 443 LISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWFF 521
Cdd:cd17436  281 LLCLMAFVSAFSIGFGPMTWLVLsEIYPADIRGRAFSFCNSFNWAANLLITLSFLDLIDVIGLSWTFLLYGVVGVAGVVF 360
                        490
                 ....*....|....*.
gi 398366553 522 VYFWYPEVKGLSLEEV 537
Cdd:cd17436  361 IYLFVPETKGQSLEEI 376
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
84-537 8.99e-34

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 133.51  E-value: 8.99e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMA---IARTLTFLICGRLLVGIAVGVSAQCVPLFLSE 160
Cdd:cd17432   54 LTVSIFPLGGLFGSLLVGPLVIRLGRKGTLLLNNIFAIVAAILMGlskIAKSFEMIIVGRFLVGINAGISLNVVPMYLGE 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 161 ISPSRIRGFMLTLNIIAITGGQLVSYVIAslMKEI---DNSWRYLFALSAIPAILFLSILDFIPESPRWS-ISKGDILYT 236
Cdd:cd17432  134 SAPKNLRGAVGLVPAIFITLGILLGQVLG--LRELlgnEEGWPLLLALTGVPALLQLLTLPFFPESPRYLlIEKGDEEAA 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 237 RDSLRMLyptastyHVNSKIKQLIIELdklrLYEDASEpllvqsqsvirymdsSTSGTLSPPNIKRLssntertsntmss 316
Cdd:cd17432  212 RKALQRL-------RGKEDVDDEMEEM----LEEQRAE---------------KGVGTVSVLELFRD------------- 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 317 ssaylsalrgpapngalasnkkkrhrmepRTIR-ALIVGCMLMFFQQITGFNAFMYYAAIIFSKFNIKNPLLPPILIA-- 393
Cdd:cd17432  253 -----------------------------RSVRwQLISIIVLMAGQQLCGINAIYFYADSIFLEAGIPEDKIQYVTVGtg 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 394 STNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSVGFG-HDQVN----LLLISVVIYVAAYASAMGSVPWT-CVE- 466
Cdd:cd17432  304 ACEVLATITCVLVIERLGRRPLLIGGFGLMAVWCAVLTVALSlQNTVSwmpyLSIVCIFAYIASFGIGPAGVPFIlTTEi 383
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 398366553 467 FLPLNRRSfgASCIACT-NWLTNAFVSMTYLSTINTIGdENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537
Cdd:cd17432  384 FDQSSRPA--AFMVAGSlNWLSNFLVGLLFPFIQEGLG-AYCFLVFAVICLLTAIYIFFVLPETKGKTFLEI 452
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
46-536 1.48e-29

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 120.71  E-value: 1.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd17434    7 AVLGNFSFGYALVYTSPVIPALEQGDDPRLHLNVHQISWFGSVFTLGAAAGGLSAMFLNDRLGRKLSIMFSAVPSALGYL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMkeidnSWRYLFAL 205
Cdd:cd17434   87 LMGSAQGIWMLLLGRFLTGFAGGITAASIPVYVSEISHPGVRGALGACPQIMAVFGSLALYALGLLL-----PWRWLAVA 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 206 SAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLYPTASTYHVNskikqliieldklrlYEDASEPLLVQSQsvir 285
Cdd:cd17434  162 GEVPVVIMILLLCFMPNSPRFLISKGKDEKALKALAWLRGPNTDYMTE---------------FEQIKDNIRKQSS---- 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 286 ymdsstsgTLSPPNIKrlssntertsntmssssaylsalrgpapngalasnkkkrhrmEPRTIRALIVGCMLMFFQQITG 365
Cdd:cd17434  223 --------RLSWAELK------------------------------------------TPSYYKPILIAVVMRFLQQLTG 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 366 FNAFMYYAAIIFSKFNIknpLLPP----ILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLlcSVGFghdqvnL 441
Cdd:cd17434  253 ITPILVYLEPIFHLTAV---ILEPkydaALVGAVRLLSVAIAASLMDKAGRKILLFTSAFLMFAANL--SMGL------I 321
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 442 LLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWF 520
Cdd:cd17434  322 PLIAAMLFIMGYAMGWGPITWLLMsEILPLKARGVASGLCVVVSWITAFVLTQLFLPVVVTFGLQVPFLFFAAVCAVSII 401
                        490
                 ....*....|....*.
gi 398366553 521 FVYFWYPEVKGLSLEE 536
Cdd:cd17434  402 FTACCVPETKGRTLEQ 417
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
41-226 1.40e-24

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 103.74  E-value: 1.40e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  41 LIFVGATIGGLLFGYDTGVISGVLLSLkPEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:COG0477   14 RALLALALGTFLEGLDFTIVNVALPSI-AADLGA---SSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWR 200
Cdd:COG0477   90 GLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAAL-GWR 168
                        170       180
                 ....*....|....*....|....*.
gi 398366553 201 YLFALSAIPAILFLSILDFIPESPRW 226
Cdd:COG0477  169 WIFLINAPLGLLALVLRLRLPESRGL 194
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
43-214 1.72e-21

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 96.13  E-value: 1.72e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  43 FVGATIGGLLFGYDTGVISGVLLSLKPEDLSlvVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFIL 122
Cdd:cd17316    1 LLLAGLGWFFDAYDFFLIGFVAPVLAAEFSL--GLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 123 AAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMK---EIDNSW 199
Cdd:cd17316   79 ATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIpllSGDWGW 158
                        170
                 ....*....|....*
gi 398366553 200 RYLFALSAIPAILFL 214
Cdd:cd17316  159 RILFLIGALPALLAL 173
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
41-225 2.18e-21

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 95.81  E-value: 2.18e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  41 LIFVGATIGGLLFGYDTGVISGVLLSLKpEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:COG2814   10 LALLALALGAFLSGLGIGIVLPALPLIA-ADLGA---SPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLF 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWR 200
Cdd:COG2814   86 ALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADL-FGWR 164
                        170       180
                 ....*....|....*....|....*.
gi 398366553 201 YLFALSAIPAIL-FLSILDFIPESPR 225
Cdd:COG2814  165 WVFLVNAVLALLaLLLLLRLLPESRP 190
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
41-214 1.55e-17

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 84.15  E-value: 1.55e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  41 LIFVGATIGGLLFGYDTGVISGVLLSLKpEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:COG2271   10 RILALLFLAYFLNYLDRSNLSVAAPPLQ-ADLGL---SAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLW 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWR 200
Cdd:COG2271   86 GLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAF-GWR 164
                        170
                 ....*....|....
gi 398366553 201 YLFALSAIPAILFL 214
Cdd:COG2271  165 AAFLILGLPGLLLA 178
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
43-244 1.84e-17

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 84.28  E-value: 1.84e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  43 FVGATIGGLLFGYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFIL 122
Cdd:cd17371    1 FWAAFLGWALDGFDLLLLGLVLPALIAE----FGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 123 AAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLM---KEIDNSW 199
Cdd:cd17371   77 FTLLCGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLfplLPPEIAW 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 398366553 200 RYLFALSAIPAILFLSILDFIPESPRWSISKGDILYT--RDSLRMLY 244
Cdd:cd17371  157 RVLFLLGALPALLVLFIRRFVKEPPQWQAARAARRHFadRPSLRELF 203
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
41-232 2.55e-16

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 80.86  E-value: 2.55e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   41 LIFVGATIGGLLFGYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIF 120
Cdd:TIGR00895  17 RAIILSFLIMLMDGYDLAAMGFAAPAISAE----WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLF 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  121 ILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTL-----NIIAITGGQLVSYVIASLmkei 195
Cdd:TIGR00895  93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLmfcgyPIGAAVGGFLAGWLIPVF---- 168
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 398366553  196 dnSWRYLFALSAI-PAILFLSILDFIPESPRWSISKGD 232
Cdd:TIGR00895 169 --GWRSLFYVGGIaPLLLLLLLMRFLPESIDFLVSKRP 204
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
46-236 6.61e-16

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 79.39  E-value: 6.61e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLlslkPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:cd06174    1 LLLGFFLTGLARGLISPLL----PALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGAL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIAS-LMKEIDNSWRYLFA 204
Cdd:cd06174   77 LFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGiLASSLGFGWRAVFL 156
                        170       180       190
                 ....*....|....*....|....*....|..
gi 398366553 205 LSAIPAILFLSILDFIPESPRWSISKGDILYT 236
Cdd:cd06174  157 IAAALALLAAILLLLVVPDPPESARAKNEEAS 188
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
74-241 9.09e-16

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 80.06  E-value: 9.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   74 LVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAV-GVSAQ 152
Cdd:TIGR00898 121 LVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIgGIWVQ 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  153 CVPLFLsEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKeidnSWRYLFALSAIPAILFLSILDFIPESPRWSISKGD 232
Cdd:TIGR00898 201 AVVLNT-EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGR 275

                  ....*....
gi 398366553  233 ILYTRDSLR 241
Cdd:TIGR00898 276 IEEALKILQ 284
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
51-217 3.84e-15

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 76.86  E-value: 3.84e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  51 LLFGYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIA 130
Cdd:cd17365    9 VLDGFDLAVMGFVAPALAQD----WGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 131 RTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTL-----NIIAITGGQLVSYVIASLmkeidnSWRYLFAL 205
Cdd:cd17365   85 QSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSLAVTLmfcgyPLGAALGGFLAAALIPAF------GWRSVFLL 158
                        170
                 ....*....|..
gi 398366553 206 SAIPAILFLSIL 217
Cdd:cd17365  159 GGVPPLILLPLL 170
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
74-221 5.11e-13

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 70.30  E-value: 5.11e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  74 LVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQC 153
Cdd:cd17317   19 LVCDRDWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTV 98
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 154 VPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKeidnSWRYLFALSAIPAILFLSILDFIP 221
Cdd:cd17317   99 GFVLGMEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIR----DWRWLQLAISLPGLLFLLLLWWLP 162
PRK03893 PRK03893
putative sialic acid transporter; Provisional
42-244 6.23e-13

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 71.27  E-value: 6.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  42 IFVGATIGGLLFGYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFI 121
Cdd:PRK03893  21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE----FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 122 LAAIGMAIARTLTFLICGRLLVGIAV----GVSAQCVplflSEISPSRIR----GFMLT-LNIIAITGGQLVSYVIASLm 192
Cdd:PRK03893  97 VGTLACGFAPGYWTLFIARLVIGMGMageyGSSATYV----IESWPKHLRnkasGFLISgFSIGAVVAAQVYSLVVPVW- 171
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 398366553 193 keidnSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRMLY 244
Cdd:PRK03893 172 -----GWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILY 218
2_A_01_02 TIGR00880
Multidrug resistance protein;
91-223 3.39e-12

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 64.21  E-value: 3.39e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   91 VGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFM 170
Cdd:TIGR00880   9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 398366553  171 LTLNIIAITGGQLVSYVIASLMKEIDNsWRYLFALSAIPAIL-FLSILDFIPES 223
Cdd:TIGR00880  89 LGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAaFILLAFLLPET 141
MFS_1 pfam07690
Major Facilitator Superfamily;
48-225 6.38e-12

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 67.06  E-value: 6.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   48 IGGLLFGYDTGVISGVLLSLKPEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGM 127
Cdd:pfam07690   3 LAAFLAALGRSLLGPALPLLLAEDLGI---SPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  128 AIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSA 207
Cdd:pfam07690  80 LFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASL-FGWRAAFLILA 158
                         170
                  ....*....|....*...
gi 398366553  208 IPAILFLSILDFIPESPR 225
Cdd:pfam07690 159 ILSLLAAVLLLLPRPPPE 176
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
77-225 9.72e-12

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 66.83  E-value: 9.72e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:COG2223   37 LSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIA 116
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398366553 157 FLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWRYLFALSAIP----AILFLSILDFIPESPR 225
Cdd:COG2223  117 LVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAF-GWRNAFLILGILllvvAVLAWLFLRDPPAGAA 188
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
84-225 4.04e-11

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 64.88  E-value: 4.04e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17324   38 LLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVP 117
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLF-ALSAIPAILFLSILDFIPESPR 225
Cdd:cd17324  118 PEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQL-LGWRAAFlAIAVLALLAALLLWRLLPSLPP 179
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
77-221 1.64e-10

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 62.94  E-value: 1.64e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:cd17372   31 LSAWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLGLGGGPQLASW 110
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 398366553 157 FLsEISPSRIRGFMLTLNIIAITGGQLVSYVIASL-MKEIdnSWRYLFALSAIPAILFLSILDFIP 221
Cdd:cd17372  111 YL-EFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLvMPRL--GWRWLLAFSSVPSSLLLVFYRWTP 173
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
96-243 3.05e-10

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 62.31  E-value: 3.05e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  96 GSILAFPLADRYGRRITLAIccSIFILAAIGMAIARTLTF----------LICGRLLVGIAVGVSAQCVPLFLSEISPSR 165
Cdd:cd17367   56 GGWLFGRLADRIGRRAALTL--SVSLMAAGSLVIAVTPTYatigiwapiiLLLARLLQGLSVGGEYGTSATYLSEVAPPG 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 166 IRGFMLTLNIIAITGGQLVSYVIASLMKEI-------DNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRD 238
Cdd:cd17367  134 RRGFYSSFQYVTLIGGQLLALGVLLVLQHTlgedqmaAWGWRIPFLLGGVLAVVVLWLRRGLEETESFEAIAESNEASAG 213

                 ....*
gi 398366553 239 SLRML 243
Cdd:cd17367  214 TLREL 218
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
84-243 1.39e-09

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 59.90  E-value: 1.39e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17325   35 LIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAP 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSLRML 243
Cdd:cd17325  115 PEERGRAMGIFSSAIGLGFLIGPLLGGLLADA-LGYRAPFLVCAALALLALVLALLLLPEPRPPPNKRAVSAARLRSGLR 193
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
77-214 1.60e-09

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 59.89  E-value: 1.60e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:cd17319   35 LSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIK 114
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553 157 FLSEISPSRIRGFMLTLNIIAIT-GGQLVSYVIASLMKeiDNSWRYLFALSAIPAILFL 214
Cdd:cd17319  115 ALAEWFPARERGRATGLFNSGAPlGAAIGPPLSGWLLL--LFGWRWAFIIEGLLGLLLA 171
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
84-225 2.21e-09

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 59.51  E-value: 2.21e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFgSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGI-AVGVSAQCVPLfLSEIS 162
Cdd:cd17474   39 LITAFTLPAAVL-MPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIgAAGLGPLALTL-IGDLF 116
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398366553 163 PSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdnSWRYLFALSAIPAILFLSILDFIPESPR 225
Cdd:cd17474  117 EGGERAKAMGLYEAALGLGIAVGPLLGGLLAAI--SWRYPFFLLAALIPVAFLAILFLLPEPK 177
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
75-231 3.55e-09

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 58.79  E-value: 3.55e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  75 VVLTDVQKELITSSTSVG----------SFFGSILAFpLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVG 144
Cdd:cd17328   20 GVLPDIQSDFLIDDSLAGllqtvfiisyMVLSPIFGY-LGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVG 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 145 IAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAILFLSILDFIPESP 224
Cdd:cd17328   99 IGEASYSPIAPTIIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQATGGWRWAFRVTGVLGVLLAILLLLFVREP 178

                 ....*..
gi 398366553 225 RWSISKG 231
Cdd:cd17328  179 PRGAAEG 185
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
38-221 8.56e-09

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 57.56  E-value: 8.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  38 KTSLIFVGATIGGLLFGYDTGVISGVLLSLKpEDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICC 117
Cdd:COG0738    5 NYRRALIAIYLLFFLWGFATALWGPLIPALK-DAFGL---SDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 118 SIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNII----AITGGQLVSYVIASlmk 193
Cdd:COG0738   81 LLMALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFfslgALLGPLLGGLLILL--- 157
                        170       180
                 ....*....|....*....|....*...
gi 398366553 194 EIDNSWRYLFALSAIPAILFLSILDFIP 221
Cdd:COG0738  158 GLSLSWHLPYLILAVLLLLLALLFLRSK 185
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
37-231 1.01e-08

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 58.06  E-value: 1.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   37 FKTSLIFVgatIGGLLF--GYDTGVISGVLLSLKPEdlslVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLA 114
Cdd:TIGR01299 164 FQWALFFV---LGLALMadGVEVFVVGFVLPSAEKD----LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLL 236
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  115 ICCSI-FILAAIGMAIARTLTFLICgRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLT-LNIIAITGGQLVSYVIASLM 192
Cdd:TIGR01299 237 ICLSVnGFFAFFSSFVQGYGFFLFC-RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSwLCMFWMIGGIYAAAMAWAII 315
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 398366553  193 KEID-----------NSWRYLFALSAIPAILFLSILDFIPESPRWSISKG 231
Cdd:TIGR01299 316 PHYGwsfqmgsayqfHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENG 365
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
76-222 1.95e-08

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 56.43  E-value: 1.95e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  76 VLTDVQKELITSST----SVGSFF-----GSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIA 146
Cdd:cd17323   21 ALPQIAEDFHVSEEvanlGVSLFVlgfglGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFF 100
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 147 vGVSAQCV-PLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEiDNSWRYLFALSAIPA-ILFLSILDFIPE 222
Cdd:cd17323  101 -GSSPLAIgAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQ-SLGWRWIFWFLAIISgFCLILIFLFLPI 176
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
84-224 2.57e-08

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 56.03  E-value: 2.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17477   35 LVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALAT 114
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYL-FALSAIPAILFLSILDFIPESP 224
Cdd:cd17477  115 NENRGRVLGLYSTVLGLGFALGPLLLALVGTAGALPFLIaAVLLLLALVPLLLTRRAAPEIE 176
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
77-226 2.58e-08

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 55.97  E-value: 2.58e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:cd17441   31 LPSWQVALLTSVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYSWILVLRGLVGFGIGGVPQSVTL 110
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 157 FlSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEiDNSWRYLFALSAIPAILFLSILDFIPESPRW 226
Cdd:cd17441  111 Y-AEFLPMKSRAKCILLIEVFWALGTVFEVLLAVFVMP-TLGWRWLLILSALPLLIFAVLCFWLPESARY 178
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
46-214 2.63e-08

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 56.13  E-value: 2.63e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSL------KPEDLSLVVLTdvqkeLITSSTSVGSFFGSILAFPLADRYGRRI------TL 113
Cdd:cd17364    4 AGMGFFTDAYDLFSISLVTKILgrlyygGKGSLPSGVSG-----LVNAAALVGTIIGQLFFGFLGDRFGRKRvygvelII 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 114 AICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVI----- 188
Cdd:cd17364   79 MIIGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYANKKRRGALIAAVFAMQGFGILAGAIVtlils 158
                        170       180       190
                 ....*....|....*....|....*....|....
gi 398366553 189 --------ASLMKEIDNSWRYLFALSAIPAILFL 214
Cdd:cd17364  159 aifehplpAGTYHHADLVWRIVLGLGAIPALSVL 192
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
78-224 3.03e-08

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 55.68  E-value: 3.03e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  78 TDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLF 157
Cdd:cd17489   29 SEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATL 108
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398366553 158 LSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEiDNSWRYLFALSAIPAILFLSILDFIPESP 224
Cdd:cd17489  109 VADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQ-HLGFAVLFIVAAVLALLALLLVFLVKDPP 174
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
63-221 4.78e-08

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 54.99  E-value: 4.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  63 VLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCsiFILAAIGMAIARTLTFLI-CG-R 140
Cdd:cd17374   18 KFTSTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSL--LQLAIFGTCAAFAPTFPVyCVlR 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 141 LLVGIAV-GVSAQCVPLFLSEISPSRiRGFMLTLNIIAITGGQLVSYVIASLMKEidnsWRYLFALSAIPAILFLSILDF 219
Cdd:cd17374   96 FLAGFAVsGISINTLILGTEWTTPRH-RALAITLTSCFFSIGQMLLAGLAYAIRD----WRLLQLVVSVPFFLFFLYSWW 170

                 ..
gi 398366553 220 IP 221
Cdd:cd17374  171 LP 172
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
70-224 7.95e-08

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 54.50  E-value: 7.95e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  70 EDLSLVVLTDVQKELITSST----SVGSFF-----GSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGR 140
Cdd:cd17320   15 IDMYLPALPAIARDLGASASavqlTLSAYLlgfalGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIAR 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 141 LLVGIAVGVSAQCVPLFLSEISP----SRIRGFMLTLNIIA-----ITGGQLVSYViaslmkeidnSWRYLFA-LSAIPA 210
Cdd:cd17320   95 FLQGLGAAAGSVVARAIVRDLYSgaelAKIFSLLMMILAIApalapLLGGLLLLFF----------GWRAIFVfLALLGL 164
                        170
                 ....*....|....
gi 398366553 211 ILFLSILDFIPESP 224
Cdd:cd17320  165 LLLLLVLLFLPETL 178
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
84-182 7.96e-08

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 54.21  E-value: 7.96e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:COG2814  247 LLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAP 326
                         90
                 ....*....|....*....
gi 398366553 164 SRIRGFMLTLNIIAITGGQ 182
Cdd:COG2814  327 PEARGRASGLYNSAFFLGG 345
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
77-231 8.66e-08

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 54.65  E-value: 8.66e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSI-FILAAIGMAIARTLTFLICgRLLVGIAVGVSAQCVP 155
Cdd:cd17439   31 LSDSNKGMLGLIVYLGMMVGAFLWGGLADRIGRRQCLLISLSVnSVFAFFSSFVQGYGTFLFC-RLLSGVGIGGSIPIVF 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 156 LFLSEISPSRIRGFMLT-LNIIAITGGQLVSYVIASLMKEID-----------NSWRYLFALSAIPAILFLSILDFIPES 223
Cdd:cd17439  110 SYFSEFLAQEKRGEHLSwLCMFWMIGGIYASAMAWAIIPHYGwsfqmgsayqfHSWRVFVLVCAFPSVFAIGALTTMPES 189

                 ....*...
gi 398366553 224 PRWSISKG 231
Cdd:cd17439  190 PRFFLENG 197
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
74-212 8.84e-08

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 54.49  E-value: 8.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  74 LVVLTDVQKELITSSTSVG--------SFFGSILAFP-LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVG 144
Cdd:cd17321   16 NVALPTIARDLGASPSQLQwvvnayllAFAALLLLAGrLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQG 95
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 145 IAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAIL 212
Cdd:cd17321   96 IGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLEL-FGWRWIFLINVPIGLV 162
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
84-208 1.45e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 54.17  E-value: 1.45e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSaQCVPLFLSEISP 163
Cdd:cd06179   36 WISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGIGAGTQ-GLGAAVASELVP 114
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 398366553 164 SRIRGFMLT-LNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAI 208
Cdd:cd06179  115 NKYRGLVQGvVNLVASPGSALGPLIAGALVEANAAGWRWIFYINAI 160
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
103-221 1.97e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 53.35  E-value: 1.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 103 LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMltlNIIA--ITG 180
Cdd:cd17504   54 LGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQGIGGAVFPLAFALVREEFPPERVPVAQ---GILSatFGI 130
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 398366553 181 GQLVSYVIASLMKEiDNSWRYLFALSAIPAILFLSILDFIP 221
Cdd:cd17504  131 GAGIGLPLGGWIVQ-HLGWRWIFWTAAPVAVLLAALVPLID 170
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
77-231 2.36e-07

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 53.26  E-value: 2.36e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:cd17363   31 LSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGYGFFLFCRLLSGIGIGGSIPIVFS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 157 FLSEISPSRIRGFMLT-LNIIAITGGQLVSYVIASLMKEID-----------NSWRYLFALSAIPAILFLSILDFIPESP 224
Cdd:cd17363  111 YFAEFLAREKRGEHLSwLCMFWMIGGLYASAMAWAIIPHYGwgfsmgtayqfHSWRVFVIVCALPSVASVVALTFMPESP 190

                 ....*..
gi 398366553 225 RWSISKG 231
Cdd:cd17363  191 RFLLEVG 197
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
84-212 4.00e-07

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 52.23  E-value: 4.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd06173  248 LLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVP 327
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWRYLFALSAIPAIL 212
Cdd:cd06173  328 DELRGRVFSVYNALNSGAMPLGALLAGLLADAL-GLSAVFLLAGALLLL 375
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
84-217 4.27e-07

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 52.19  E-value: 4.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17325  239 LLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVP 318
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAILFLSIL 217
Cdd:cd17325  319 PEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDA-FGFATPFLAAAALLLLAAVLF 371
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
88-217 5.72e-07

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 51.80  E-value: 5.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  88 STSVGSFFGSILafpLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIR 167
Cdd:cd17474  246 LLALGSLFVGRL---LKKRFGARRILVIGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEER 322
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 398366553 168 GFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAILFLSIL 217
Cdd:cd17474  323 GTASSLYNFVRFLGQAVGPLLFGLLLEI-FGLSAPFLVGAAIALAAAVLL 371
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
76-231 7.67e-07

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 51.85  E-value: 7.67e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  76 VLTDVQKELITSSTS---------VGSFFGSILAFPLADRYGRRITLAICCSI-FILAAIGMAIARTLTFLICgRLLVGI 145
Cdd:cd17438   21 VLPSAEKDMCLSSSNkgmlglivyLGMMAGAFIWGGLADKLGRKRCLIISLAInASFAFLSSFVQGYGAFLFC-RLISGF 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 146 AVGVSAQCVPLFLSEISPSRIRGFMLT-LNIIAITGGQLVSYVIASLMKEID-----------NSWRYLFALSAIPAILF 213
Cdd:cd17438  100 GIGGSLPIVFAYFSEFLAREKRGEHLSwLCMFWMIGGLYASAMAWSIIPHYGwgfsmgtnyhfHSWRVFVIICALPCIAS 179
                        170
                 ....*....|....*...
gi 398366553 214 LSILDFIPESPRWSISKG 231
Cdd:cd17438  180 IIALKFMPESPRFLLEMG 197
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
75-214 1.11e-06

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 51.03  E-value: 1.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  75 VVLTDVQKELITSSTSVGSFF---------GSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGI 145
Cdd:COG2807   39 PLLPEIRADLGLSATQAGLLTtlpllafglFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGA 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 146 AVGVSAQCVPLFLSEISPSRIrGFMLTLNIIAITGGQ-LVSYVIASLMKEIdnSWRYLFALSAIPAILFL 214
Cdd:COG2807  119 GIAVGNVLLPGLIKRWFPDRV-GLMTGLYTAAMGLGAaLAAGLTVPLAAAL--GWRGALAVWALLALLAL 185
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
83-221 1.78e-06

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 50.04  E-value: 1.78e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  83 ELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEIS 162
Cdd:cd17379   36 DLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFV 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553 163 PSRIRGFMLTLNIIAITGGQLVSYVIASLMKeidnSWRYLFALSAIPAILFLSILDFIP 221
Cdd:cd17379  116 GSKYRRTVGIVYQMFFTLGLLILPGIAYFIP----HWRWLQLAVTLPNFLFLLYYWFIP 170
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
77-224 1.86e-06

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 50.40  E-value: 1.86e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPL 156
Cdd:cd17333   28 LNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGLGAGILDTGANT 107
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 157 FLSEISPSRIRGFMLTLNIIAITGGqLVSYVIASLMKEIDNSWRYLFALSAIPAILfLSILDFIPESP 224
Cdd:cd17333  108 FVGALFEESSATRLNVLHGFFGLGA-LIGPLIATSLLTSELSWSWAYLIIGLIYLL-LAILILLTLFP 173
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
84-232 1.93e-06

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 50.50  E-value: 1.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   84 LITSSTSVGSFFGSILAFPLADRYGRR----ITLAICCSIFILAAIgMAIARTLTF---LICGRLLVGIAVGVSAQCVPL 156
Cdd:TIGR00887  60 AVNGSASIGTLAGQLFFGWLADKLGRKrvygMELIIMIIATVASGL-SPGSSPKSVmatLCFWRFWLGVGIGGDYPLSAI 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  157 FLSEISPSRIRGFMLTLnIIAITG-GQLVSYVIA----------------------SLMKEIDNSWRYLFALSAIPAILF 213
Cdd:TIGR00887 139 ITSEFATKKWRGAMMAA-VFAMQGfGILAGAIVAlivlagfkhsleaaadeasctgSCVPAVDYMWRILIGFGAVPALLA 217
                         170
                  ....*....|....*....
gi 398366553  214 LSILDFIPESPRWSISKGD 232
Cdd:TIGR00887 218 LYFRLTIPETPRYTADVAK 236
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
91-223 2.57e-06

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 49.69  E-value: 2.57e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   91 VGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP----SRI 166
Cdd:TIGR00710  51 LGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPgeelSRI 130
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553  167 RGF-MLTLNIIAITGGQLVSYVIASLmkeidnSWRYLFA-LSAIPAILFLSILDFIPES 223
Cdd:TIGR00710 131 YSIlMPVLALAPAVAPLLGGYILVWL------SWHAIFAfLSLAGILLSALIFFILPET 183
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
83-230 3.44e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 49.49  E-value: 3.44e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  83 ELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEIS 162
Cdd:cd17473   38 PLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYF 117
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 163 --PSRIRgfMLTLNIIAITGGQLVSYVIASLMKEIdnSWRYLFALSAIPAILFLSILDFIPESPRWSISK 230
Cdd:cd17473  118 egEERAK--MLGLQSAAMSLGGVVFLLLGGALAEI--GWRAPFLVYLLALPVLILVLLFLPEPARKSKSA 183
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
90-211 4.63e-06

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 49.06  E-value: 4.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  90 SVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIG--MAIARTLTFLICGRLLVGIAVGVSAQCVPL--FLSEISPSR 165
Cdd:cd17369  274 SVVAAITIPLFGWLSDRVGRRPVYLAGALLAALFAFPffWLLDTGSTWLIVLAAVVVLGVLHGMMYGPQaaFLAELFPTR 353
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 398366553 166 IR--GFMLTLNIIAITGGQLVSYVIASLMKEIDNSWR---YLFALSAIPAI 211
Cdd:cd17369  354 VRytGASLGYQLGAILGGGFAPLIATALVAATGSWWPvalYLAALAVISLV 404
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
84-214 4.94e-06

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 48.75  E-value: 4.94e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTF---LICGRLLVGIAVGVSAQcVPLFLSE 160
Cdd:cd17316  217 LYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSPtllLLLLFILSFFVGGVWGA-LYAYLAE 295
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 161 ISPSRIR--GFMLTLNIIAITGGqLVSYVIASLMKEIDNS--WRYLFALSAIPAILFL 214
Cdd:cd17316  296 LFPTEVRatGVGLSYNLGRLGGG-GAPPLIALLLASTGGTgvPALILALLAIVALIVA 352
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
84-225 6.46e-06

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 48.33  E-value: 6.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRR--ITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEI 161
Cdd:COG2271  220 LLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAEL 299
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 398366553 162 SPSRIRGFMLTL-NIIAITGGQLVSYVIASLMKEIdnSWRYLFALSAIPAIL-FLSILDFIPESPR 225
Cdd:COG2271  300 FPKKARGTASGLvNTFGFLGGALGPLLVGYLLDAT--GYQAAFLLLAALALLaALLALLLLRETRK 363
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
77-223 6.94e-06

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 48.26  E-value: 6.94e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVpL 156
Cdd:cd17442   33 LEDWQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMVGCGVSGHSQGL-I 111
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398366553 157 FLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAILFLSILDFIPES 223
Cdd:cd17442  112 IKTEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIPT-LGWRWLIRFASIPGIILIVVFKFIPRT 177
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
84-217 8.63e-06

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 47.99  E-value: 8.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17329   39 LVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIADVTT 118
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMkeIDNSWRYLFALSAIPAILFLSIL 217
Cdd:cd17329  119 PENRTRAFSLLYWAINLGVAIGPLLGGLL--LLYSFRLLFLAAAVLFLLAALVL 170
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
84-217 9.38e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 47.95  E-value: 9.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17473  237 LALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVP 316
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVS-YVIASLMKEIDNSWRYLFALSAIPAILFLSIL 217
Cdd:cd17473  317 PELRGRAMGIVTSAFFLGQFLSpLVLGPLVNLTGGLSGAFLILGVLALVLAIVLL 371
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
84-214 1.86e-05

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 47.20  E-value: 1.86e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIAR--TLTFLICGRLLVGIAVGVSAQCVPLFLSEI 161
Cdd:COG2211  268 LLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGpgNLWLLLVLAALAGIGLGAILVLPWAMLADV 347
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 398366553 162 SPS-------RIRGFMLTLNIIAITGGQLVSYVIASLM-------KEIDNSWRYLFAL----SAIPAILFL 214
Cdd:COG2211  348 VDYdewktgrRREGLYFGIFTFAIKLGQALAGALAGLLlalfgyvAGAAQSPSALTGIrllfFLLPAVLLL 418
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
82-213 2.28e-05

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 46.64  E-value: 2.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  82 KELITSSTSVGSFFGSILAFPLADRYGRRITLAicCSIFILAAIGMAIARTLTFLI--CGRLLVGIAV-GVSAQCVPLFL 158
Cdd:cd17446   35 RQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLI--WSYLQMAVSGTCAAFSPSFPIycVFRFLTGMALsGIVLNSVSLNV 112
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 398366553 159 sEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEidnsWRYLFALSAIPAILF 213
Cdd:cd17446  113 -EWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRD----WRWLQLAVSLPFFIF 162
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
96-225 2.40e-05

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 46.88  E-value: 2.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  96 GSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNI 175
Cdd:PRK11551  66 GALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMY 145
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 398366553 176 IAITGGQLVSYVIASLMKEiDNSWRYLFALSAI-PAILFLSILDFIPESPR 225
Cdd:PRK11551 146 CGVPFGGALASVIGVLAAG-DAAWRHIFYVGGVgPLLLVPLLMRWLPESRA 195
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
103-217 2.63e-05

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 46.77  E-value: 2.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 103 LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFML-TLNiiAITG- 180
Cdd:cd17370  257 LSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTAYgLFN--TVVGi 334
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 398366553 181 GQLVSYVIASLMKEiDNSWRYLFALSAIPAILFLSIL 217
Cdd:cd17370  335 GWLLASLIAGYLWD-LISPSAAFLFSAVLALIALLLL 370
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
84-217 2.92e-05

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 46.65  E-value: 2.92e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRY-GRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEIS 162
Cdd:cd06174  243 LLLSLFGLAGALGSLLLGLLSDRLiGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELF 322
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 398366553 163 PSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAILFLSIL 217
Cdd:cd06174  323 PPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLAAILL 377
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
91-231 3.03e-05

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 46.83  E-value: 3.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  91 VGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFM 170
Cdd:cd17440   45 LGMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFLSSFVQGYGLFLFCRLLSGFGIGGAVPTVFSYFAEVLAREKRGEH 124
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 398366553 171 LT-LNIIAITGGQLVSYVIASLMKEID-----------NSWRYLFALSAIPAILFLSILDFIPESPRWSISKG 231
Cdd:cd17440  125 LSwLCMFWMIGGIYASAMAWAIIPHYGwsfsmgsayqfHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVG 197
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
84-225 4.94e-05

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 45.64  E-value: 4.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIAR-TLTFLICGRLLVGIAVGVSAQCVPLFLSEIS 162
Cdd:COG2223  245 LLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLALALgSLWLFLVLFLLLGLALGGGNGAVFALVPDIF 324
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 398366553 163 PSRIRGFMLTL-NIIAITGGQLVSYVIASLmKEIDNSWRYLFALSAIPAILFLSILDFIPESPR 225
Cdd:COG2223  325 PTKNAGAVYGLvGAAGGLGGFLGPLLFGAL-LDATGSYTAAFLVFAVLALVALVLTLLLYRRPR 387
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
103-219 5.63e-05

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 45.64  E-value: 5.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 103 LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTL----NIIAI 178
Cdd:cd17503   54 LADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRGAAMGLvglvILLAP 133
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 398366553 179 TGGQLVSYVIASLMkeidnSWRYLFALS---AIPAILFLSILDF 219
Cdd:cd17503  134 AIGPTLGGWLTDNL-----SWRWIFYINlpiGILALLLAPLLDL 172
PRK12307 PRK12307
MFS transporter;
46-230 6.55e-05

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 45.30  E-value: 6.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  46 ATIGGLLFGYDTGVISGVLLSLKPeDLSLvvlTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAI 125
Cdd:PRK12307  23 AWLGYVFDGFDFMLIFYIMYLIKA-DLGL---TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 126 GMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIdNSWRYLFAL 205
Cdd:PRK12307  99 LSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-YGWRAAFFV 177
                        170       180
                 ....*....|....*....|....*
gi 398366553 206 SAIPAILFLSILDFIPESPRWSISK 230
Cdd:PRK12307 178 GLLPVLLVIYIRARAPESKEWEEAK 202
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
82-221 2.54e-04

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 43.50  E-value: 2.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  82 KELITSSTSVGSFFGSILAFPLAD-RYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSE 160
Cdd:cd17378   35 VGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFLTGFGRSGIGTCALVLATE 114
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 398366553 161 ISPSRIRGFMLTLNIIAITGGQLVSYVIASLmkeIDNSWRYLFALSAIPAILFLSILDFIP 221
Cdd:cd17378  115 PVGPKWRGQVGMSTFFFFVLGFMSLPGIAYL---NGSSWRVLYFWTSIPALIYCILVYLFA 172
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
96-214 3.07e-04

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 43.13  E-value: 3.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  96 GSILAFPLADRYGRR----ITLAI-CCSIFILA------AIGmaIARTLTFLIcGRLLVGIAVGVSAQCVPLFLSEISPS 164
Cdd:cd17368   56 GAIVLGAYADRIGRKpamtLTLAImALGTLLIAlaptyaTIG--IAAPLLVLL-ARLLQGFAAGGEVGGVTAYLVEAAPP 132
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553 165 RIRGFMLTLNI----IAITGGQLVSYVIASLMKE---IDNSWR--YLFALSAIPAILFL 214
Cdd:cd17368  133 GRRGFYTSWQSasqqVAIVAGALVGYLLSLTLTAealAEWGWRipFFIGLLIIPLGLWL 191
emrD PRK11652
multidrug transporter EmrD;
102-223 3.27e-04

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 43.36  E-value: 3.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 102 PLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLL--VGIAV-GVSAQCVPLFLSEISPSRIRGFMLTLNIIAi 178
Cdd:PRK11652  65 PLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIqgLGTGVgGVMARTLPRDLYEGTQLRHANSLLNMGILV- 143
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 398366553 179 tgGQLVSYVIASLMKEIDNsWR--YLFaLSAIPAILFLSILDFIPES 223
Cdd:PRK11652 144 --SPLLAPLIGGLLTTLFG-WRacYLF-LLLLGAGVTFSMARWMPET 186
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
84-148 4.91e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 42.57  E-value: 4.91e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVG 148
Cdd:cd17330   38 LLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGG 102
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
77-226 4.93e-04

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 42.62  E-value: 4.93e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIA-RTLTFLICGRLLVGIAVGVSAQCVP 155
Cdd:cd17341   31 LSTSQIGLLVAIPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALALAvSSYWGLLVLGFLLGFAGANFASGQP 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 156 lFLSEISPSRIRGfmLTLNIIAITG------GQLVSYVIASLMKEIDNS--WRYLFALSAIP----AILFLSILDFIPES 223
Cdd:cd17341  111 -WASFWFPKEKIG--GAAGGIAGAGnmgvavSQLLAPLIAGAIVFDGGFvgWRNAFFVPGILlaiaAVLVLLFGDDLPTG 187

                 ...
gi 398366553 224 PRW 226
Cdd:cd17341  188 KAS 190
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
89-148 5.59e-04

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 42.45  E-value: 5.59e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 398366553  89 TSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMA-IARTLTFLICGrLLVGIAVG 148
Cdd:COG2270  283 VQIVAALGALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYfLTTALAFWILG-LLIGLVMG 342
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
87-220 6.17e-04

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 42.17  E-value: 6.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  87 SSTSVGSFFGSilafpLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRI 166
Cdd:cd17502   42 TSTAFQPIYGK-----LSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGLMSLAFIIIADLVPPRE 116
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 398366553 167 RG---------FMLTLNIIAITGGQLVSYViaslmkeidnSWRYLF---------ALSAIPAILFLSILDFI 220
Cdd:cd17502  117 RGkyqgyigavFGIASVAGPLIGGAFTDHL----------SWRWCFyinlpigglALALLRTILLSSIFGFL 178
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
103-228 9.38e-04

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 41.77  E-value: 9.38e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 103 LADRYGRRITLAI--CCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITG 180
Cdd:cd17380   57 LADRFGGKKVLLLavALWSLATLLTPLLAYSSLPLLILSRILLGLGEGVHFPSMTSLFSRWVPVSERSRAVSIVTAGSYL 136
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 398366553 181 GQLVSYVIASLMKEIDNsWRYLFALSAIPAILFLSILdFIPESPRWSI 228
Cdd:cd17380  137 GTLLGGLIGPLLLEYYG-WPSVFYFFGLLGLLWALVW-LIYLPPVWAI 182
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
69-225 1.09e-03

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 41.59  E-value: 1.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   69 PEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVG 148
Cdd:TIGR00881  19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQG 98
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553  149 VSAQCVPLFLSEISPSRIRGFMLT-LNIIAITGGQLVSYVIASLMKEIdNSWRYLFALSAIPAILF-LSILDFIPESPR 225
Cdd:TIGR00881  99 MGWPPCGRTVTKWFSRSERGTWVSfWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIVPGIIAIIVsLICFLLLRDSPQ 176
TRI12 pfam06609
Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific ...
103-240 1.15e-03

Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.


Pssm-ID: 115279 [Multi-domain]  Cd Length: 598  Bit Score: 41.58  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  103 LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGvSAQCVPLFLSEISPSRIRGF-MLTLNIIAITGG 181
Cdd:pfam06609 101 LTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAAMTLLGVAAG-PAGASPLFIGELMSNKTKFLgLLIVSAPTIAMN 179
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 398366553  182 QLVSYVIASLmkEIDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYTRDSL 240
Cdd:pfam06609 180 GAGPYFGQRL--AIQGNWRWIFYIYIIMSAIAVLLIIIWYHPPSFAQLHGKKARKRDEL 236
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
91-214 1.44e-03

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 40.91  E-value: 1.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  91 VGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFM 170
Cdd:cd17445   47 LGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAASPSLFMAMRFLLGAALAGVYLTLYLTRLELCDPPQRLLV 126
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 398366553 171 LTLNIIAITGGQLVSYVIASLMKeidnSWRYLFALSAIPAILFL 214
Cdd:cd17445  127 AMAGGLTMVGGHFLLLGLALGCG----SWRVLQGTITAPLSLFL 166
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
77-224 1.72e-03

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 40.75  E-value: 1.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  77 LTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAI---CCSIFILAAIGMAIARTLT---FLICGRLLVGIAVGVS 150
Cdd:cd17371  242 LSFEGSAGYLVVTILGGFLGYLAGGFLADRIGRRNNFALfalGSAISILLYFFLPLSPTLIlilGFPLGFFASGPFSGMG 321
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 398366553 151 AqcvplFLSEISPSRIRGF-MLTLNIIAITGGQLVSYVIASLMKEIdnSWRYLFALSAIPAILFLSILDFIPESP 224
Cdd:cd17371  322 A-----YLTELFPTAVRATaQGFCYNVGRIIGALFPFLVGFLATSG--SLGTAIAVFAAVYYIAGLVLALLLPET 389
MFS_NIMT_CynX_like cd17339
2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator ...
76-212 1.78e-03

2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340897 [Multi-domain]  Cd Length: 374  Bit Score: 40.64  E-value: 1.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  76 VLTDVQKELITSSTSVGSF-------FG--SILAFPLADRYGRRITLAICCsIFILAAIGMAIARTLTFLICGRLLVGIA 146
Cdd:cd17339   21 LLPEIRDDLGLSASQAGLLttlpllcFAvfSPLAPRLARRFGLERTLLLAL-LLLAAGILLRSLGGIALLFLGTALAGAG 99
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 398366553 147 VGVSAQCVPLFLSEISPSRIrGFMLTLNIIAI-TGGQLVSYVIASLMKEIDNSWRYLFALSAIPAIL 212
Cdd:cd17339  100 IAVGNVLLPSLIKRDFPRRV-GLMTGLYTTSMnLGAALASGLSVPLAQALGGGWRGALAIWALPALL 165
PRK10642 PRK10642
proline/glycine betaine transporter ProP;
92-224 2.13e-03

proline/glycine betaine transporter ProP;


Pssm-ID: 182611 [Multi-domain]  Cd Length: 490  Bit Score: 40.85  E-value: 2.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  92 GSFFGSilafpLADRYGRRITLAIccSIFILA----AIGM-------AIARTLTFLICgRLLVGIAVGVSAQCVPLFLSE 160
Cdd:PRK10642  74 GLFFGM-----LGDKYGRQKILAI--TIVIMSistfCIGLipsyatiGIWAPILLLLC-KMAQGFSVGGEYTGASIFVAE 145
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 398366553 161 ISPSRIRGFMLT-LNIIAITG---GQLVSYVIASLMKE---IDNSWRYLFALSAIPAILFLSILDFIPESP 224
Cdd:PRK10642 146 YSPDRKRGFMGSwLDFGSIAGfvlGAGVVVLISTIVGEanfLDWGWRIPFFIALPLGIIGLYLRHALEETP 216
PRK10406 PRK10406
alpha-ketoglutarate transporter; Provisional
92-214 2.19e-03

alpha-ketoglutarate transporter; Provisional


Pssm-ID: 182433 [Multi-domain]  Cd Length: 432  Bit Score: 40.56  E-value: 2.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  92 GSFFGSIlafplADRYGRR----ITLAICC--SIFILAAIGMAIARTLT--FLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:PRK10406  80 GWLFGRI-----ADKHGRKksmlISVCMMCfgSLVIACLPGYETIGTWApaLLLLARLFQGLSVGGEYGTSATYMSEVAV 154
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 398366553 164 SRIRGFMLTLNIIAITGGQLVSYVIASLMKEI-------DNSWRYLFALSAIPAILFL 214
Cdd:PRK10406 155 EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTledaelrEWGWRIPFALGAVLAVVAL 212
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
84-214 2.57e-03

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 40.24  E-value: 2.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYG-RRITLAICCSIFILAAIGMAIArTLTFLICGRLLVGIAVGVSAQCVPLFLSEIS 162
Cdd:COG2807  254 LLLSLFQLAGIPGSLLVPLLADRLGdRRPLLLLLGLLGLAGLLGLLLA-PGSLPWLWAVLLGLGQGGLFPLALTLIGLRA 332
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 398366553 163 PS-----RIRGFMltlniiaitggQLVSYVIASL-------MKEIDNSWRYLFALSAIPAILFL 214
Cdd:COG2807  333 RTpaeaaALSGMA-----------QSVGYLLAALgpllvgaLHDATGSWTAALLLLAALAVLML 385
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
103-225 3.18e-03

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 39.89  E-value: 3.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553 103 LADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAvGVSAQCVPLFLSEISPS-RIRGFMLTLNIIAITGg 181
Cdd:cd17472   55 LSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQGSG-AISSVVMALLADLTREEnRTKAMALIGASIGIAF- 132
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 398366553 182 qLVSYVIASLMKEIDNSwRYLFALSAIPAIL-FLSILDFIPESPR 225
Cdd:cd17472  133 -AISMVLGPLLAAHLGV-SGLFLITAILSLVsLLILLFFVPDPPK 175
MFS_1 pfam07690
Major Facilitator Superfamily;
87-185 3.47e-03

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 39.71  E-value: 3.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   87 SSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIAR---TLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:pfam07690 242 GLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSltlSSLWLLLALLLLGFGFGLVFPALNALVSDLAP 321
                          90       100
                  ....*....|....*....|..
gi 398366553  164 SRIRGFMLTLNIIAITGGQLVS 185
Cdd:pfam07690 322 KEERGTASGLYNTAGSLGGALG 343
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
84-217 3.98e-03

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 39.56  E-value: 3.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISP 163
Cdd:cd17391  244 LVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKITP 323
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 398366553 164 SRIRGFMLTLNIIAITGGQlvsyVIASLMKEIDNSW---RYLFALSAIpaILFLSIL 217
Cdd:cd17391  324 KEVAGRIFGYNQSFQYLGN----VAGPLLGSAIAAHfgyRAVFVVTAL--LVLLNAI 374
2A0114euk TIGR00894
Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]
84-225 5.00e-03

Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]


Pssm-ID: 129972 [Multi-domain]  Cd Length: 465  Bit Score: 39.73  E-value: 5.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553   84 LITSSTSVGSFFGSILAFPLADRY--GRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEI 161
Cdd:TIGR00894  80 LILSSHFYGQIIIQIPVGYLAGKYvfKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKW 159
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 398366553  162 SPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAILFLSI-LDFIPESPR 225
Cdd:TIGR00894 160 APPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLwFVFPADDPS 224
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
58-137 5.24e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 39.46  E-value: 5.24e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  58 GVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFfgsILAFP---LADRYGRRITLAICCSIFILAAIGMAIARTLT 134
Cdd:cd17477  201 GFLEGAFYSLLPLYGLRLGLSVAQAALLLAAFVLGGL---LLQWPlgwLADRFDRRRVLLGCALLGALAALLLPLVPGLP 277

                 ...
gi 398366553 135 FLI 137
Cdd:cd17477  278 LAL 280
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
84-181 6.09e-03

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 39.28  E-value: 6.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSFFGSILAFPLADRYGRR-----ITLAICCSIFILAAIgMAIARTLTFLICGRLLVGIAVGVSAQCVPLFL 158
Cdd:cd17368  262 LVTLLAGVANFIWAPLGGALSDRIGRRpvllvITLAALVTLYPVFAW-LTAAPSFGRLLLVLLVLSFFFGMYGGAMVVAL 340
                         90       100
                 ....*....|....*....|....*.
gi 398366553 159 SEISPSRIR--GFMLTLNI-IAITGG 181
Cdd:cd17368  341 VELFPVRVRstGFSLVYALaVAIFGG 366
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
84-214 9.48e-03

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 38.41  E-value: 9.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398366553  84 LITSSTSVGSF---FGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLT-FLICGRLLVGIAVGVSAQCVPLFLS 159
Cdd:cd17355   39 VISLAFTVGLLafgLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWqLYLLWGLLGGGGAGTLAAVAFATVA 118
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 398366553 160 EISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDnSWR-------YLFALSAIPAILFL 214
Cdd:cd17355  119 AWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAF-GWRtallvlaLLALLVLVPVLLLL 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH