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Conserved domains on  [gi|16077801|ref|NP_388615|]
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methylthioribose permease [Bacillus subtilis subsp. subtilis str. 168]

Protein Classification

amino acid permease( domain architecture ID 1000735)

amino acid permease facilitates the transport of amino acids

Gene Ontology:  GO:0006865|GO:0022857
PubMed:  29416041|17417706

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0306 super family cl29102
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 22-452 3.16e-124

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00909:

Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 367.93  E-value: 3.16e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    22 LARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGE 101
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGK-AGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   102 LLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGsmAGAVFNLPAAVIILLITAIVSRGVKESTR 181
Cdd:TIGR00909  80 LTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGLDLPAVLTAKPG--NGGVFNLPALLIVLFLTYILYLGAKESGK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   182 FNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALA 261
Cdd:TIGR00909 158 VNDILVVLKVAALLLFAALGAIHFASNNYTPFMPMGFGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   262 VCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGL 340
Cdd:TIGR00909 238 VVTLLYVLVAAVILGAVPWRQLAGSTaPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   341 FAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRVPFVPVVPIISA 420
Cdd:TIGR00909 318 LSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQRAFRCPLVPVLPVLVV 397

                         410       420       430
                  ....*....|....*....|....*....|..
gi 16077801   421 GICLWFMYSLPGVTWLSFVIWIAVGTLVYFLY 452
Cdd:TIGR00909 398 SYCIYLLLNLGPGTTVWFLVWMLLGSVFYFIY 429
 
Name Accession Description Interval E-value
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 22-452 3.16e-124

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 367.93  E-value: 3.16e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    22 LARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGE 101
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGK-AGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   102 LLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGsmAGAVFNLPAAVIILLITAIVSRGVKESTR 181
Cdd:TIGR00909  80 LTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGLDLPAVLTAKPG--NGGVFNLPALLIVLFLTYILYLGAKESGK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   182 FNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALA 261
Cdd:TIGR00909 158 VNDILVVLKVAALLLFAALGAIHFASNNYTPFMPMGFGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   262 VCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGL 340
Cdd:TIGR00909 238 VVTLLYVLVAAVILGAVPWRQLAGSTaPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   341 FAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRVPFVPVVPIISA 420
Cdd:TIGR00909 318 LSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQRAFRCPLVPVLPVLVV 397

                         410       420       430
                  ....*....|....*....|....*....|..
gi 16077801   421 GICLWFMYSLPGVTWLSFVIWIAVGTLVYFLY 452
Cdd:TIGR00909 398 SYCIYLLLNLGPGTTVWFLVWMLLGSVFYFIY 429
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
15-461 1.24e-100

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 307.98  E-value: 1.24e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  15 AQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSY 94
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  95 SYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLagfnlhipaaltgapgsmAGAVFNLPAAVIILLITAIVSR 174
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLF------------------PAGGSVLIALVLILLLTLLNLR 142

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 175 GVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPF--GMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNM 252
Cdd:COG0531 143 GVKESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNI 222

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 253 PVGIISALAVCTVLYIAVSLVLTGMMPYAKL-NVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAM 331
Cdd:COG0531 223 PRAIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 332 SRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFI--NLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRV 409
Cdd:COG0531 303 ARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRV 382

                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|..
gi 16077801 410 PFvPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK 461
Cdd:COG0531 383 PL-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
AA_permease_2 pfam13520
Amino acid permease;
26-422 1.13e-35

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 136.67  E-value: 1.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    26 LSAFDLTLLGIGCVIGTGIFVitGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAF 105
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFV--APLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   106 LIGWDLMLEYVIALSAVATGWSSYFQSLLagfnlhipaaltGAPGSMAGAVFNLPAAVIILLITAIVSRGVKESTRFNNV 185
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASYLLSAL------------GPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNI 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   186 IVLMKIAIILLFIIV-GIGYVKPD-------NWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNpqKNMPVGII 257
Cdd:pfam13520 147 LGILKLLLPLILIIIlGLVTADGGgfnllsgEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIF 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   258 SALAVCTVLYIAVSLVLTGMMPYAKL----NVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSR 333
Cdd:pfam13520 225 IGVIIVGVLYILVNIAFFGVVPDDEIalssGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALAR 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   334 DGLLP--GLFAKVHPsFKTPFRNTWLTGIVAAGIAGFINLGTLAH--LVNMGTLA---AFTVISIAVIVLRKKHPEIKAS 406
Cdd:pfam13520 305 DGVLPfsRFFAKVNK-FGSPIRAIILTAILSLILLLLFLLSPAAYnaLLSLSAYGyllSYLLPIIGLLILRKKRPDLGRI 383

                         410
                  ....*....|....*.
gi 16077801   407 FRVPFVPVVPIISAGI 422
Cdd:pfam13520 384 PGRWPVAIFGILFSLF 399
frlA PRK11357
amino acid permease;
19-460 9.88e-29

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 117.65  E-value: 9.88e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   19 SKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPAL-IISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYV 97
Cdd:PRK11357   3 SQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   98 TLGELLAFLIGW-DLMLEYVIALSAVATGWSSYFqsllagfnlhipAALTGapgsMAGAVFNLPAAVIILLITAIVSRGV 176
Cdd:PRK11357  83 AGSRPLAFLSGWaSFWANDAPSLSIMALAIVSNL------------GFLTP----IDPLLGKFIAAGLIIAFMLLHLRSV 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  177 KESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPF------GMKGVILSAATVFFAYLGFDAVSNASEEVKNPQK 250
Cdd:PRK11357 147 EGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTaigatgSFMALLAGISATSWSYTGMASICYMTGEIKNPGK 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  251 NMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFV-GQDAVAGII-SVGAIIGITTVMLALLYAQVRL 327
Cdd:PRK11357 227 TMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtPISDALTWIpALGSTAGIFvAITAMIVILGSLSSCVMYQPRL 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  328 TFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHpEIKASF 407
Cdd:PRK11357 307 EYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKPLW 385

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 16077801  408 RVPFVPV---VPIISAGICLW--FMYS-LPGVtwLSFVIWIAVGTLVYFLYSRKHSLLN 460
Cdd:PRK11357 386 RTPAFGLmttLAIASSLILVAstFVWApIPGL--ICAVIVIATGLPAYAFWAKRSRQLN 442
 
Name Accession Description Interval E-value
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 22-452 3.16e-124

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 367.93  E-value: 3.16e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    22 LARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGE 101
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGK-AGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   102 LLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGsmAGAVFNLPAAVIILLITAIVSRGVKESTR 181
Cdd:TIGR00909  80 LTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGLDLPAVLTAKPG--NGGVFNLPALLIVLFLTYILYLGAKESGK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   182 FNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALA 261
Cdd:TIGR00909 158 VNDILVVLKVAALLLFAALGAIHFASNNYTPFMPMGFGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   262 VCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGL 340
Cdd:TIGR00909 238 VVTLLYVLVAAVILGAVPWRQLAGSTaPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   341 FAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRVPFVPVVPIISA 420
Cdd:TIGR00909 318 LSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQRAFRCPLVPVLPVLVV 397

                         410       420       430
                  ....*....|....*....|....*....|..
gi 16077801   421 GICLWFMYSLPGVTWLSFVIWIAVGTLVYFLY 452
Cdd:TIGR00909 398 SYCIYLLLNLGPGTTVWFLVWMLLGSVFYFIY 429
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 4-458 2.42e-101

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 313.68  E-value: 2.42e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801     4 LFRKKPLeTLSAQSKSKsLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAEFSS 83
Cdd:TIGR00906  10 LIRRKIV-DLDSREESK-MKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    84 SIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAG--FNLHIPAALTGAPGSmagAVFNLPA 161
Cdd:TIGR00906  88 RVPKAGSAYLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKqiGQFRRTYFKLNYDGL---AEYPDFF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   162 AV-IILLITAIVSRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSP--------FMPFGMKGVILSAATVFFAY 232
Cdd:TIGR00906 165 AVcLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSIteekgaggFMPYGFTGVLSGAATCFFAF 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   233 LGFDAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDAVAGIISVGAIIG 312
Cdd:TIGR00906 245 IGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCG 324

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   313 ITTVMLALLYAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIA 392
Cdd:TIGR00906 325 MSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAAC 404

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   393 VIVLRK-------------------------------------------------------------------------- 398
Cdd:TIGR00906 405 VLILRYqpglvydqakdtdekdtldswvpftsksesqsegfslrtlfsglilglsilttygraaiaeeawsialltlflv 484

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16077801   399 ----------KHPEIKA--SFRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSL 458
Cdd:TIGR00906 485 lfllvvltiwRQPQNKQkvAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSL 556
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
15-461 1.24e-100

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 307.98  E-value: 1.24e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  15 AQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSY 94
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  95 SYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLagfnlhipaaltgapgsmAGAVFNLPAAVIILLITAIVSR 174
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLF------------------PAGGSVLIALVLILLLTLLNLR 142

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 175 GVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPF--GMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNM 252
Cdd:COG0531 143 GVKESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNI 222

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 253 PVGIISALAVCTVLYIAVSLVLTGMMPYAKL-NVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAM 331
Cdd:COG0531 223 PRAIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 332 SRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFI--NLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRV 409
Cdd:COG0531 303 ARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRV 382

                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|..
gi 16077801 410 PFvPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK 461
Cdd:COG0531 383 PL-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
11-456 7.07e-37

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 140.64  E-value: 7.07e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  11 ETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGS 90
Cdd:COG1113   2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIAL-AGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  91 VYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAgfnlHIPAAltgapgsmagavfnLPAAVIILLITA 170
Cdd:COG1113  81 FSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFP----DVPQW--------------VWALVFLVLLTA 142

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 171 IVSRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSP---------------FMPFGMKGVILSAATVFFAYLGF 235
Cdd:COG1113 143 INLLSVKLFGEFEFWFALIKVVAIVAFIVVGLLLIFFGFGLPggppaglsnlwdhggFFPNGIGGVLAALQIVVFAFGGI 222

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 236 DAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISVGAIIGIT 314
Cdd:COG1113 223 ELVGIAAAEAKDPEKTIPKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGsPFVTVFSLLGIPAAAGIMNFVVLTAAL 302

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 315 TVMLALLYAQVRLTFAMSRDGLLPGLFAKVHPSfKTPFRNTWLTGIVAAgIAGFINL-------GTLAHLVNMGTLAAFT 387
Cdd:COG1113 303 SSLNSGLYSTSRMLYSLAERGDAPKFFGKLSKR-GVPVRAILLSAVVLL-IGVVLNYllpekafTFLLSISGFGALFVWL 380

                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16077801 388 VISIAVIVLRKKHPE---IKASFRVPFVPVVPIISAGIC---LWFMYSLPG--VTWLSFVIWIAVGTLVYFLYSRKH 456
Cdd:COG1113 381 MILVSQLKFRRRLPRegaAALKFKMPGFPYTSYLTLAFLaavLVLMAFDPDtrIALIVGPVWLALLVVGYFLVRRRR 457
AA_permease_2 pfam13520
Amino acid permease;
26-422 1.13e-35

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 136.67  E-value: 1.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    26 LSAFDLTLLGIGCVIGTGIFVitGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAF 105
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFV--APLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   106 LIGWDLMLEYVIALSAVATGWSSYFQSLLagfnlhipaaltGAPGSMAGAVFNLPAAVIILLITAIVSRGVKESTRFNNV 185
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASYLLSAL------------GPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNI 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   186 IVLMKIAIILLFIIV-GIGYVKPD-------NWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNpqKNMPVGII 257
Cdd:pfam13520 147 LGILKLLLPLILIIIlGLVTADGGgfnllsgEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIF 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   258 SALAVCTVLYIAVSLVLTGMMPYAKL----NVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSR 333
Cdd:pfam13520 225 IGVIIVGVLYILVNIAFFGVVPDDEIalssGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALAR 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   334 DGLLP--GLFAKVHPsFKTPFRNTWLTGIVAAGIAGFINLGTLAH--LVNMGTLA---AFTVISIAVIVLRKKHPEIKAS 406
Cdd:pfam13520 305 DGVLPfsRFFAKVNK-FGSPIRAIILTAILSLILLLLFLLSPAAYnaLLSLSAYGyllSYLLPIIGLLILRKKRPDLGRI 383

                         410
                  ....*....|....*.
gi 16077801   407 FRVPFVPVVPIISAGI 422
Cdd:pfam13520 384 PGRWPVAIFGILFSLF 399
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 36-451 1.14e-31

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 126.79  E-value: 1.14e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    36 IGCVIGTGIFVITGTVAATGAGPAL-IISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGWdlmle 114
Cdd:TIGR00911  54 VGTIIGSGIFVSPKGVLKNAGSVGLaLIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLW----- 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   115 yvIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGSMAGAVfnlpAAVIILLITAIVSRGVKESTRFNNVIVLMKIAII 194
Cdd:TIGR00911 129 --IELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLV----AVLCVLLLTLVNCLSVKWATRVQDIFTACKLLAL 202

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   195 LLFIIVGIGYVKPDNWSPFMP--------FGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALAVCTVL 266
Cdd:TIGR00911 203 LLIIITGWVQLGKGGVESLNPknafegteTSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFI 282

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   267 YIAVSLVLTGMMPYAKL--NVGDPVSFALKFVGQDAVAGIISVGAiiGITTVMLALLYAQVRLTFAMSRDGLLPGLFAKV 344
Cdd:TIGR00911 283 YVLTNIAYFTVLSPEELlaSLAVAVDFGERLLGVMSWAMPALVGL--SCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMI 360

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   345 HPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRVP-FVPVVPIIS-AGI 422
Cdd:TIGR00911 361 HVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPlFFPVFFLLScLFL 440

                         410       420
                  ....*....|....*....|....*....
gi 16077801   423 CLWFMYSLPGVTWLSFVIwIAVGTLVYFL 451
Cdd:TIGR00911 441 IILSLYSPPVGCGVGFII-MLTGVPVYFF 468
AA_permease pfam00324
Amino acid permease;
30-424 1.85e-29

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 120.12  E-value: 1.85e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    30 DLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGW 109
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   110 DLMLEYVIALSAVATGWSSYFQslLAGFNLHIPAALtgapgsmagavfnLPAAVIILLITAIVSRGVKESTRFNNVIVLM 189
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQ--FWELVPDIPYLW-------------VWGAVFLVLLTIINLVGVKWYGEAEFWFALI 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   190 KIAIILLFIIVGIGYVKPDNWSP---------------FMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPV 254
Cdd:pfam00324 146 KIIAIIGFIIVGIILLSGGNPNDgaifrylgdnggknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPK 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   255 GIISALAVCTVLYIAVSLVLTGMMPY-------AKLNVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRL 327
Cdd:pfam00324 226 AILQVIWRITIFYILSLLAIGLLVPWndpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRM 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   328 TFAMSRDGLLPGlFAKVHPSFKTPFRN---TWLTGIVAAGIAGFINLGTLAHLVNMGTLAAF---TVISIAVIVLRK--- 398
Cdd:pfam00324 306 LYSLARDGLAPK-FLKKVDKRGVPLRAilvSMVISLLALLLASLNPAIVFNFLLAISGLSGLivwGLISLSHLRFRKafk 384

                         410       420
                  ....*....|....*....|....*...
gi 16077801   399 --KHPEIKASFRVPFVPVVPIISAGICL 424
Cdd:pfam00324 385 yqGRSIDELPFKAPLGPLGVILGLAAII 412
frlA PRK11357
amino acid permease;
19-460 9.88e-29

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 117.65  E-value: 9.88e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   19 SKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPAL-IISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYV 97
Cdd:PRK11357   3 SQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   98 TLGELLAFLIGW-DLMLEYVIALSAVATGWSSYFqsllagfnlhipAALTGapgsMAGAVFNLPAAVIILLITAIVSRGV 176
Cdd:PRK11357  83 AGSRPLAFLSGWaSFWANDAPSLSIMALAIVSNL------------GFLTP----IDPLLGKFIAAGLIIAFMLLHLRSV 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  177 KESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPF------GMKGVILSAATVFFAYLGFDAVSNASEEVKNPQK 250
Cdd:PRK11357 147 EGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTaigatgSFMALLAGISATSWSYTGMASICYMTGEIKNPGK 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  251 NMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFV-GQDAVAGII-SVGAIIGITTVMLALLYAQVRL 327
Cdd:PRK11357 227 TMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtPISDALTWIpALGSTAGIFvAITAMIVILGSLSSCVMYQPRL 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  328 TFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHpEIKASF 407
Cdd:PRK11357 307 EYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKPLW 385

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 16077801  408 RVPFVPV---VPIISAGICLW--FMYS-LPGVtwLSFVIWIAVGTLVYFLYSRKHSLLN 460
Cdd:PRK11357 386 RTPAFGLmttLAIASSLILVAstFVWApIPGL--ICAVIVIATGLPAYAFWAKRSRQLN 442
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
14-456 1.95e-27

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 114.11  E-value: 1.95e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  14 SAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITG-TVAATGAGPAlIISFILAGLACALAAFCYAEFSSSIPISGSVY 92
Cdd:COG0833   2 SGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGyTISQAGPGGA-LLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  93 SYSYVTLGELLAFLIGWDLMLEYVIALSA--VATGwssyfqsLLAGFnlhipaALTGAPGSMAGAVFnlpaAVIILLITA 170
Cdd:COG0833  81 TYATRFIDPAFGFAVGWNYWLNWAITVAAelTAAG-------IIMQY------WFPDVPVWIWSLLF----LALIFLLNA 143

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 171 IVSRGVKESTRFnnvIVLMKIAIILLFIIVG-------IGYVKP--DNWS----PFmPFGMKGVILSAATVFFAYLGFDA 237
Cdd:COG0833 144 LSVKAFGESEFW---FSLIKVITVIAFIIVGllmifgiIGGHAPgfSNFTtgdgPF-PGGFLAILGVMMIVGFSFQGTEL 219

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 238 VSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISvgAIIgITTV 316
Cdd:COG0833 220 IGIAAGESENPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVAEsPFTLVFERAGIPYAADIMN--AVI-LTAV 296

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 317 MLAL---LYAQVRLTFAMSRDGLLPGLFAKVHPSfKTPFRNTWLTGIVAAG--IAGFINLGTL-AHLVNMGTLAAFTV-I 389
Cdd:COG0833 297 LSAGnsgLYASTRMLWSLAKEGMAPKIFAKLNKR-GVPLNALLATMAVGLLalLSSFFGAGTVyLWLLSISGLTGFIAwL 375

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801 390 SIAV--IVLRKKHPEIKAS-----FRVPFVPVVPIISAGIC------LWFMYSLPGVTWLSFVIWIAVgTLVYFLYSRKH 456
Cdd:COG0833 376 GIAIshYRFRRAYVAQGGDledlkYKAPLFPFGPIFAFILCliviigQAFDPEQRIALYIGIPFFLAC-YLGYKLKKKTK 454
PRK10238 PRK10238
aromatic amino acid transporter AroP;
13-455 4.77e-20

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 92.33  E-value: 4.77e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   13 LSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVY 92
Cdd:PRK10238   1 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQS-AGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   93 SYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAgfnlHIPAALTgapgsmagavfnlpAAVIILLITAIV 172
Cdd:PRK10238  80 HFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYP----EIPTWVS--------------AAVFFVVINAIN 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  173 SRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSP------------FMPFGMKGVILSAATVFFAYLGFDAVSN 240
Cdd:PRK10238 142 LTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPqatvsnlwdqggFLPHGFTGLVMMMAIIMFSFGGLELVGI 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  241 ASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLnVGDPVSFALKF--VGQDAVAGIISVGAIIGITTVML 318
Cdd:PRK10238 222 TAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRV-TADTSPFVLIFheLGDTFVANALNIVVLTAALSVYN 300

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  319 ALLYAQVRLTFAMSRDGLLPGLFAKVHPSfKTPFrNTWLTGIVAAGIAGFIN-------LGTLAHLVNMGTLAAFTVISI 391
Cdd:PRK10238 301 SCVYCNSRMLFGLAQQGNAPKALASVDKR-GVPV-NTILVSALVTALCVLINylapesaFGLLMALVVSALVINWAMISL 378

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16077801  392 AVIVLR--KKHPEIKASFRVPFVPvvpiISAGICLWFMYSL-------PGV---TWLsFVIWIAVGTLVYFLYSRK 455
Cdd:PRK10238 379 AHMKFRraKQEQGVVTRFPALLYP----LGNWICLLFMAAVlvimlmtPGMaisVYL-IPVWLIVLGIGYLFKEKT 449
PRK11387 PRK11387
S-methylmethionine permease;
14-424 3.81e-18

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 86.44  E-value: 3.81e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   14 SAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYS 93
Cdd:PRK11387   4 PTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   94 YSYVTLGELLAFLIGWDLMLEYVIALSAVATGwssyfqsllAGFNL-----HIPAaltgapgsmagAVFNLPAAVIILLI 168
Cdd:PRK11387  84 YAARYLGPATGYTVAWLYWLTWTVALGSSLTA---------AGFCMqywfpQVPV-----------WPWCLLFCALIFGL 143

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  169 TAIVSRGVKESTRFNNVIvlmKIAIILLFIIVG----IGYVKPDNWSP-----------FMPFGMKGVILSAATVFFAYL 233
Cdd:PRK11387 144 NVVSTRFFAEGEFWFSLI---KVVTILAFIVLGgaaiFGFIPMQDGSPapglrnltaegWFPHGGLPILMTMVAVNFAFS 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  234 GFDAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNV-GDPVSFALKFVGQDAVAGIISVGAIIG 312
Cdd:PRK11387 221 GTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQAGVeKSPFVLVFEKVGIPYAADIFNFVILTA 300

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  313 ITTVMLALLYAQVRLTFAMSRDGLLPGLFAKVHPsfktpfRNTWLTGIVAAGIAGFINLGTLAH-----LVNMGTLAAFT 387
Cdd:PRK11387 301 ILSAANSGLYASGRMLWSLSNEGTLPACFARLTK------RGIPLTALSVSMLGGLLALFSSVVapdtvFVALSAISGFA 374

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 16077801  388 VISI------AVIVLRKKH-----PEIKASFRVPFVPVVPIISAGICL 424
Cdd:PRK11387 375 VVAVwlsicaSHFMFRRRHlrdgkALSELAYRAPWYPLTPILGFVLCL 422
PRK10836 PRK10836
lysine transporter; Provisional
 14-363 1.48e-16

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 81.79  E-value: 1.48e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   14 SAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITG-TVAATGAGPALiISFILAGLACALAAFCYAEFSSSIPISGSVY 92
Cdd:PRK10836   5 TKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGaTISQAGPGGAL-LSYMLIGLMVYFLMTSLGELAAYMPVSGSFA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   93 SYSYVTLGELLAFLIGWDLMLEY--VIALSAVATgwssyfqSLLAGFnlhipaALTGAPGSMAGAVFnlpaAVIILLITA 170
Cdd:PRK10836  84 TYGQNYVEEGFGFALGWNYWYNWavTIAVDLVAA-------QLVMSW------WFPDTPGWIWSALF----LGVIFLLNY 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  171 IVSRGVKESTRFnnvIVLMKIAIILLFIIVGIGYV-------KPDNWSPFM----PF--GMKGVILSAATVFFAYLGFDA 237
Cdd:PRK10836 147 ISVRGFGEAEYW---FSLIKVTTVIVFIIVGVLMIigifkgaEPAGWSNWTigdaPFagGFAAMIGVAMIVGFSFQGTEL 223

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  238 VSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLN-----VGDPVSFALKFVGQDavAGIISVGAIIG 312
Cdd:PRK10836 224 IGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSllrndVKDISVSPFTLVFQH--AGLLSAAAVMN 301

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 16077801  313 --ITTVMLAL----LYAQVRLTFAMSRDGLLPGLFAKVHPSfKTPFRNTWLTGIVAA 363
Cdd:PRK10836 302 avILTAVLSAgnsgMYASTRMLYTLACDGKAPRIFAKLSRG-GVPRNALYATTVIAG 357
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 24-344 2.93e-13

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 71.55  E-value: 2.93e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    24 RTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYS-YSYVTLGEL 102
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtYASRFVDPA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   103 LAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLhipaaltgapgsmagAVFNLPAAVIILLITAIVSRGVKESTRF 182
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNP---------------AVWIAIFYVFIVIINLFGVKGYGEAEFW 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   183 NNVIvlmKIAIILLFIIVGI----------GYVKPDNW---SPFMPFGMKGVILSAATVF----FAYLGFDAVSNASEEV 245
Cdd:TIGR00913 147 FSSI---KILAIIGFIILSIilncgggpnhGYIGFRYWhdpGAFAGGTIGGRFKGVCSVFvtaaFSFGGTELVALTAGEA 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   246 KNPQKNMPVGIISALAVCTVLYIAvSLVLTGMM-PY------AKLNVGD----PVSFALKFVGQDAVAGIISVGAIIGIT 314
Cdd:TIGR00913 224 ANPRKSIPRAAKRTFWRILVFYIL-TLFLIGFLvPYndprllSSSSSSDsaasPFVIAIQNHGIKVLPHIFNAVILISVL 302

                         330       340       350
                  ....*....|....*....|....*....|
gi 16077801   315 TVMLALLYAQVRLTFAMSRDGLLPGLFAKV 344
Cdd:TIGR00913 303 SAANSSLYASSRTLYALAHQGLAPKIFAYV 332
PRK10249 PRK10249
phenylalanine transporter; Provisional
 14-363 2.95e-13

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 71.56  E-value: 2.95e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   14 SAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTvAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYS 93
Cdd:PRK10249  11 TASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGP-AIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAH 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   94 YSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAAltgapgsmagavfnlpAAVIILLITAIVS 173
Cdd:PRK10249  90 FAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAA----------------AFFIIINAVNLVN 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  174 RGVKESTRF-------NNVIVLMKIAIILLFIIVGIGYVKPDN---WSPFMPFGMKGVILSAATVFFAYLGFDAVSNASE 243
Cdd:PRK10249 154 VRLYGETEFwfalikvLAIIGMIGFGLWLLFSGHGGEKASIDNlwrYGGFFATGWNGLILSLAVIMFSFGGLELIGITAA 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  244 EVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNvGDPVSFALKFVGQDA--VAGIISVGAIIGITTVMLALL 321
Cdd:PRK10249 234 EARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVK-SNSSPFVMIFHNLDSnvVASALNFVILVASLSVYNSGV 312

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 16077801  322 YAQVRLTFAMSRDGLLPGLFAKVHPSfKTPFRNTWLTGIVAA 363
Cdd:PRK10249 313 YSNSRMLFGLSVQGNAPKFLTRVSRR-GVPINSLMLSGAITS 353
PRK10644 PRK10644
arginine/agmatine antiporter;
32-456 4.90e-13

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 70.59  E-value: 4.90e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   32 TLLGIGCVIGTGIFVITGTVAATGAgpALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAF---LIG 108
Cdd:PRK10644  16 TLMVAGNIMGSGVFLLPANLASTGG--IAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYqtnVLY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  109 WDLMLEYVIALSAVATGWSSYFQSLLAgfnlhipaaltgapgsmAGAVFNLPAAVIILLITAIVSRGVKESTRFNNVIVL 188
Cdd:PRK10644  94 WLACWIGNIAMVVIGVGYLSYFFPILK-----------------DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  189 MKIAIILLFIIVGIGYVKPD------NWSPFMPFGMKGVILsaATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALAV 262
Cdd:PRK10644 157 LALIPIVGIAVFGWFWFRGEtymaawNVSGLGTFGAIQSTL--NVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLI 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  263 CTVLYIAVSLVLTGMMPYAKLNVGD-PVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGLF 341
Cdd:PRK10644 235 AAVCYVLSSTAIMGMIPNAALRVSAsPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIF 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  342 AKVHPSfktpfrntwltGIVAAGIAGFINLGTLAHLVNMGTLAA--FTVI-SIAVI----------VLRKKHPEIKASFR 408
Cdd:PRK10644 315 ARVNKA-----------GTPVAGLLIVGVLMTIFQLSSISPNASkeFGLVsSVSVIftlvpylytcAALLLLGHGHFGKA 383

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 16077801  409 VPFVPVVPIISAGICLWFMYSLPG--VTWlSFVIWIAVGTLVYFLYSRKH 456
Cdd:PRK10644 384 RPAYLAVTLIAFVYCIWAVVGSGAkeVMW-SFVTLMVITAFYALNYNRLH 432
PRK15049 PRK15049
L-asparagine permease;
33-413 7.73e-12

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 66.95  E-value: 7.73e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   33 LLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGWDLM 112
Cdd:PRK15049  37 MIAIGGAIGTGLFLGAGARLQM-AGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYF 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  113 LEYVIALSAVATGWSSYFQSLlagfnlhipaaltGAPGSMAGAVFNLPAAVIILLITAIvsrGVKESTRFNNVIVLMKIA 192
Cdd:PRK15049 116 INWAMTGIVDITAVALYMHYW-------------GAFGGVPQWVFALAALTIVGTMNMI---GVKWFAEMEFWFALIKVL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  193 IILLFIIVG---IGYVKP------------DNwSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGII 257
Cdd:PRK15049 180 AIVTFLVVGtvfLGSGQPldgnttgfhlitDN-GGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAIN 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  258 SALAVCTVLYIAVSLVLTGMMPYAKLNVGDPvsfalKFVGQDAVAGIISVGAIIGITTVMLAL------LYAQVRLTFAM 331
Cdd:PRK15049 259 SVIWRIGLFYVGSVVLLVMLLPWSAYQAGQS-----PFVTFFSKLGVPYIGSIMNIVVLTAALsslnsgLYCTGRILRSM 333

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  332 SRDGLLPGLFAKVHPSfKTPFRNTwLTGIVAAGIAGFIN-------LGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIK 404
Cdd:PRK15049 334 AMGGSAPSFMAKMSRQ-HVPYAGI-LATLVVYVVGVFLNylvpsrvFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGK 411

                        410
                 ....*....|..
gi 16077801  405 A---SFRVPFVP 413
Cdd:PRK15049 412 AadvSFKLPGAP 423
AA_permease_C pfam13906
C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured ...
 407-457 9.68e-11

C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured by the models pfam00324 and pfam13520.


Pssm-ID: 464034  Cd Length: 51  Bit Score: 56.82  E-value: 9.68e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 16077801   407 FRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHS 457
Cdd:pfam13906   1 FKVPLVPFLPALSILVNIYLMVQLDSLTWIRFGIWMLIGLLIYFGYGIRHS 51
proY PRK10580
putative proline-specific permease; Provisional
 15-344 3.92e-10

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 61.76  E-value: 3.92e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   15 AQSKSKsLARTLSAFDLTLLGIGCVIGTGIFVITGTvAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSY 94
Cdd:PRK10580   1 MESKNK-LKRGLSTRHIRFMALGSAIGTGLFYGSAD-AIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRY 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   95 SYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFqsllagfNLHIPAaltgapgsMAGAVFNLPaavIILLITAIVSR 174
Cdd:PRK10580  79 AQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYM-------GVWFPT--------VPHWIWVLS---VVLIICAVNLM 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  175 GVKESTRFNNVIVLMKIAIILLFIIVGIGYV--------KPDN----WSP--FMPFGMKGVILSAATVFFAYLGFDAVSN 240
Cdd:PRK10580 141 SVKVFGELEFWFSFFKVATIIIMIVAGIGIIiwgignggQPTGihnlWSNggFFSNGWLGMVMSLQMVMFAYGGIEIIGI 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  241 ASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNV-GDPVSFALKFVGQDAVAGIISVGAIIGITTVMLA 319
Cdd:PRK10580 221 TAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTnGSPFVLTFQHMGITFAASILNFVVLTASLSAINS 300

                        330       340
                 ....*....|....*....|....*
gi 16077801  320 LLYAQVRLTFAMSRDGLLPGLFAKV 344
Cdd:PRK10580 301 DVFGVGRMLHGMAEQGSAPKIFSKT 325
PRK10197 PRK10197
GABA permease;
33-352 1.63e-09

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 59.64  E-value: 1.63e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   33 LLGIGCVIGTGIFViTGTVAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGWDLM 112
Cdd:PRK10197   1 MLSIAGVIGASLFV-GSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  113 LEYVIALSAVATGWSSYFQSLLAGfnlhIPAALtgapgsmagavFNLpaaVIILLITAIVSRGVKESTRFNNVIVLMKIA 192
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILHSWVPG----IPIWL-----------FSL---VITLALTGSNLLSVKNYGEFEFWLALCKVI 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  193 IILLFIIVGI-------------GYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISA 259
Cdd:PRK10197 142 AILAFIFLGAvaisgfypyaevsGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSV 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  260 LAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSF--ALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLL 337
Cdd:PRK10197 222 IWRISIFYLCSIFVVVALIPWNMPGLKAVGSYrsVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDA 301

                        330
                 ....*....|....*
gi 16077801  338 PGLFAKVHPSfKTPF 352
Cdd:PRK10197 302 PAVMGKINRS-KTPY 315
2a30 TIGR00930
K-Cl cotransporter; [Transport and binding proteins, Other]
 161-449 3.34e-09

K-Cl cotransporter; [Transport and binding proteins, Other]


Pssm-ID: 273347 [Multi-domain]  Cd Length: 953  Bit Score: 59.34  E-value: 3.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   161 AAVIILLITAIVSRGVKESTRFNNVIVLMKIAIILLFIIvgiGYVKPDNWSPFMPF-GMKGVILS---------AATVFF 230
Cdd:TIGR00930 207 GTVTVVVLLGISFAGMEWENKAQVLFLVIVLLSILNIFV---GTIIPAFDKPAKGFfGLGNEIFSenfipgipgPEGGFF 283

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   231 AYLG--FDAV------SNASEEVKNPQKNMPVGIISALAVCTVLYIAVSL-----------------VLTGMMPYAKLNV 285
Cdd:TIGR00930 284 SLFGifFPSVtgilagANISGDLKDPQKAIPKGTLLAILTTTVVYLGSVVlfgacvvrdatgdkndtLVTNCTSAACFSE 363

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   286 GDPVSFALKFVGQDAV-------AGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGL--FAKVHPSFKTPFRNTW 356
Cdd:TIGR00930 364 CAHNTCSYGLMNNLQVmslvspfPPLITAGIFSATLSSALASLVSAPRLFQALCKDNIYPFLqfFGKGYGKNGEPLRAYL 443

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   357 LTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLR-KKHPEIKASFRVpFVPVVPIISAGICLWFMYSLpgvTW 435
Cdd:TIGR00930 444 LTAFIAEGFILIAELNTIAPIISNFFLASYALINFSCFHASlLRSPGWRPRFKY-YHWWLSLLGASLCCAIMFLI---SW 519

                         330
                  ....*....|....
gi 16077801   436 LSFVIWIAVGTLVY 449
Cdd:TIGR00930 520 WAALVAMVIALFLY 533
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 8-411 5.46e-08

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 55.12  E-value: 5.46e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    8 KPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATgAGPALIISFILAGLACALAAFCYAEFSSSIPI 87
Cdd:PRK11049   4 VKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISL-AGPSIIFVYMIIGFMLFFVMRAMGELLLSNLE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   88 SGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALtgapgsmagavfnlpaAVIILL 167
Cdd:PRK11049  83 YKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLA----------------VVLLLL 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  168 ITAIVSrgVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSP---------------FMPFGMKGVILSAATVFFAY 232
Cdd:PRK11049 147 SLNLAT--VKMFGEMEFWFAMIKIVAIVALIVVGLVMVAMHFQSPtgveasfahlwndggMFPKGLSGFFAGFQIAVFAF 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  233 LGFDAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLnVGDPVSFALKFV--GQDAVAGIISVGAI 310
Cdd:PRK11049 225 VGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV-VPDKSPFVELFVlvGLPAAASVINFVVL 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  311 IGITTVMLALLYAQVRLTFAMSRDGLLPGLFAKVH----PSFKTPFRNTWLTG------IVAAGIAGFINLGTLAHLVNM 380
Cdd:PRK11049 304 TSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSkravPAKGLTFSCICLLGgvvllyVNPSVIGAFTLVTTVSAILFM 383

                        410       420       430
                 ....*....|....*....|....*....|...
gi 16077801  381 GTlaaFTVISIAVIVLRKKHPEI--KASFRVPF 411
Cdd:PRK11049 384 FV---WTIILCSYLVYRKQRPHLheKSIYKMPL 413
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 55-396 7.77e-08

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 54.37  E-value: 7.77e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801    55 GAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGE----LLAFLIGWdlmLEYVIALSAVATGWSSYF 130
Cdd:TIGR00907  44 GGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPrqmpFASWMTGW---FNLAGQVAGTASTDLSVA 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   131 QSLLAGFNLHIPAAL-----TGAPGSMAGavFNLPAAVIILLITAIVSRGVKESTRFNnVIVLMKIAIILLFIIVG---- 201
Cdd:TIGR00907 121 QLILGIVSLTTPGREyiptrWHIFGIMIG--IHLIHALINSLPTKWLPRITSSAAYWS-LLGFLTICITLLACKSPkfnd 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   202 ----IGYVKPDN--WSPFMPFGMKGVILSAatvfFAYLGFDAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLT 275
Cdd:TIGR00907 198 gkfvFTNFNNSTggWKPGGFAFLLGLLNPA----WSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAIGIVTGFCFNIVLF 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   276 GMMPYAKLNVGDPVSFALKFVGQDAV---AGIISVGAIIGITTVMLAL--LYAQVRLTFAMSRDGLLPG--LFAKVHPSF 348
Cdd:TIGR00907 274 FSMGDIDSLISSTTGQPIAQIFYNALgnkAGAIFLLCLILVTSFFCAItcMTANSRMIYAFSRDGGLPFspLWSRVNPRT 353

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 16077801   349 KTPFRNTWLTGIVAAGIAgfinlgtlahLVNMGTLAAF-TVISIAVIVL 396
Cdd:TIGR00907 354 QVPLNAVWLSAVWIILIG----------LLGLGSSTAFqAIFSVCTVAL 392
potE PRK10655
putrescine transporter; Provisional
 19-344 1.25e-06

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 50.41  E-value: 1.25e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   19 SKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAgpALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVT 98
Cdd:PRK10655   1 MSAKSNKMGVVQLTILTAVNMMGSGIIMLPTKLAQVGT--ISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   99 LGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLagfnlhiPAALTgaPGSMAgavfnlpAAVIILLITAIVS--RGV 176
Cdd:PRK10655  79 FGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELF-------GATLS--PVQIC-------LATIGVLWLCTVAnfGGA 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  177 KESTRFNNVIVLMKIAIILLFIIVGIGYVKPD----NWSPF-MPFGmKGVILSAATVFFAYLGFDAVSNASEEVKNPQKN 251
Cdd:PRK10655 143 RITGQISSVTVWGVIIPVVGLSIIGWFWFSPSlyvaAWNPHhLPFF-SAVGSSIAMTLWAFLGLESACANSDAVENPERN 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  252 MPVGIISALAVCTVLYIAVSLVLTGMMPYAKL-NVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLY--AQVrlt 328
Cdd:PRK10655 222 VPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELaNSTAPFGLAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFtiAQV--- 298

                        330
                 ....*....|....*..
gi 16077801  329 FAMSRD-GLLPGLFAKV 344
Cdd:PRK10655 299 FKSSADeGYFPKIFSRV 315
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
 76-267 2.34e-05

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 46.47  E-value: 2.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   76 FCYAEFSSSIP-ISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGSMag 154
Cdd:PRK15238  56 LMMAEYGSAFKdEKGGIYSWMNKSVGPKFAFIGTFMWFASYIIWMVSTASKIWIPFSTFIFGKDTTQTWHFLGLNSTQ-- 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  155 aVFNLPAAVIILLITAIVSRGVKESTRFNNV---------IVLMKIAIILLFI--------IVGIGYVKPDNWSPFMPFG 217
Cdd:PRK15238 134 -VVGILAVIWMILVTFVASKGINKIAKVTSIggiavmllnIVLLLVSIIILILngghfaqpIGVSSFVTSPNPAYQSPIA 212

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 16077801  218 MKGVILSAatvFFAYLGFDAVSNASEEVKNPQKNMPVGIISALAVCTVLY 267
Cdd:PRK15238 213 VLSFVVFA---IFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGY 259
PRK10746 PRK10746
putative transport protein YifK; Provisional
 18-344 1.15e-04

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 44.42  E-value: 1.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   18 KSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTvAATGAGPALIISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYV 97
Cdd:PRK10746   4 NKPELQRGLEARHIELIALGGTIGVGLFMGAAS-TLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801   98 TLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAalTGAPGSMAGAvfNLPAaviillitaivsrgVK 177
Cdd:PRK10746  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPA--LIAVALVALA--NLAA--------------VR 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  178 ESTRFNNVIVLMKIAIILLFIIVGIGYV---KPDNWSP-----------FMPFGMKGVILSAATVFFAYLGFDAVSNASE 243
Cdd:PRK10746 145 LYGEIEFWFAMIKVTTIIVMIVIGLGVIffgFGNGGQSigfsnltehggFFAGGWKGFLTALCIVVASYQGVELIGITAG 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16077801  244 EVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNV-GDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLY 322
Cdd:PRK10746 225 EAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSnGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMY 304

                        330       340
                 ....*....|....*....|..
gi 16077801  323 AQVRLTFAMSRDGLLPGLFAKV 344
Cdd:PRK10746 305 SCGRMLYALAKNRQLPAAMAKV 326
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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