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Conserved domains on  [gi|14194558|sp|O48041|]
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RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit

Protein Classification

cytochrome b( domain architecture ID 11475906)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-370 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 658.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    1 MPHQQILMLFGL----LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHA 76
Cdd:MTH00119   6 RKSHPLLKIINNslidLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   77 IGASMFFICIYIHIARGLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWL 156
Cdd:MTH00119  86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  157 WGGFAINDPTLTRFFALHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVS 236
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  237 FFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLM 316
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 14194558  317 FWTFTATFLVITWTATKPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKIMKM 370
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFtILLILFPLLGALENKMLNY 380
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-370 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 658.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    1 MPHQQILMLFGL----LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHA 76
Cdd:MTH00119   6 RKSHPLLKIINNslidLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   77 IGASMFFICIYIHIARGLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWL 156
Cdd:MTH00119  86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  157 WGGFAINDPTLTRFFALHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVS 236
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  237 FFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLM 316
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 14194558  317 FWTFTATFLVITWTATKPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKIMKM 370
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFtILLILFPLLGALENKMLNY 380
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-364 1.85e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 361.42  E-value: 1.85e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  10 FGLLPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIH 89
Cdd:COG1290  27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  90 IARGLYYGSYlnKK----TWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDP 165
Cdd:COG1290 107 MFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 166 TLTRFFALH-FILPFGIISLSSLHIMLLHEEGSSNPLG----TNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPd 240
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP- 263

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 241 iFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIP--NKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFW 318
Cdd:COG1290 264 -INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 14194558 319 TFTATFLVITWTATKPvePPFTTISQAAALMYFLFFISN-PIMGWME 364
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVlPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 13-198 2.61e-73

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 226.48  E-value: 2.61e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:cd00284  13 LPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFR 92

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  93 GLYYGSYLN--KKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRF 170
Cdd:cd00284  93 GLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRF 172

                       170       180
                ....*....|....*....|....*...
gi 14194558 171 FALHFILPFGIISLSSLHIMLLHEEGSS 198
Cdd:cd00284 173 FALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
13-196 1.98e-68

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 213.40  E-value: 1.98e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:pfam00033   4 LPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFR 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    93 GLYYG--SYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRF 170
Cdd:pfam00033  84 GLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRF 163

                         170       180
                  ....*....|....*....|....*.
gi 14194558   171 FALHFILPFGIISLSSLHIMLLHEEG 196
Cdd:pfam00033 164 FSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 251-340 9.74e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.73  E-value: 9.74e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHT-SKLRSMMFRPFMQLMFWTFTATFLVITW 329
Cdd:TIGR01156  66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVATTVFLFGTVVALWLGI 145

                          90
                  ....*....|.
gi 14194558   330 TATKPVEPPFT 340
Cdd:TIGR01156 146 GATLPIDKSLT 156
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-370 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 658.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    1 MPHQQILMLFGL----LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHA 76
Cdd:MTH00119   6 RKSHPLLKIINNslidLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   77 IGASMFFICIYIHIARGLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWL 156
Cdd:MTH00119  86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  157 WGGFAINDPTLTRFFALHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVS 236
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  237 FFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLM 316
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 14194558  317 FWTFTATFLVITWTATKPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKIMKM 370
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFtILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 13-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 530.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00131  21 LPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00131 101 GLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00131 181 FHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPAN 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00131 261 PLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGG 340

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 14194558  333 KPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKIMK 369
Cdd:MTH00131 341 MPVEHPFIIIGQVASVLYFsLFLVLMPLAGWLENKALE 378
CYTB MTH00145
cytochrome b; Provisional
 13-370 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 529.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00145  22 LPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00145 102 GLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00145 182 LHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00145 262 PMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGA 341

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFISNPIMGWMENKIMKM 370
Cdd:MTH00145 342 CPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
CYTB MTH00191
cytochrome b; Provisional
 13-355 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 528.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00191  18 LPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGR 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00191  98 GLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFT 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00191 178 FHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPAN 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00191 258 PLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGG 337

                        330       340
                 ....*....|....*....|...
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFI 355
Cdd:MTH00191 338 QPVEDPFILLGQISSFLYFFLFL 360
CYTB MTH00156
cytochrome b; Provisional
 13-358 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 527.43  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00156  11 LPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGR 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00156  91 GIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFT 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00156 171 FHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPAN 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00156 251 PLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGA 330

                        330       340
                 ....*....|....*....|....*.
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFISNP 358
Cdd:MTH00156 331 RPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00100
cytochrome b; Provisional
 13-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 517.27  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00100  21 LPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00100 101 GLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00100 181 FHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPAN 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00100 261 PLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGG 340

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 14194558  333 KPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKIMK 369
Cdd:MTH00100 341 QPVEHPFIIIGQLASILYFlIILILMPIASLIENNLLK 378
CYTB MTH00074
cytochrome b; Provisional
 13-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 515.00  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00074  22 LPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00074 102 GLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFA 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00074 182 FHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00074 262 PLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGG 341

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFIS-NPIMGWMENKIMK 369
Cdd:MTH00074 342 QPVEDPFIEIGQAASILYFLLFIIiIPLTGWLENKLLK 379
CYTB MTH00034
cytochrome b; Validated
 13-367 3.16e-170

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 479.59  E-value: 3.16e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00034  21 LPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00034 101 GLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00034 181 FHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPAN 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00034 261 PLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGS 340

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 14194558  333 KPVEPPFTTISQAAALMYF-LFFISNPIMGWMENKI 367
Cdd:MTH00034 341 QPVEYPFILLGQVASVLYFsLFLFFFPLISYLENKL 376
CYTB MTH00016
cytochrome b; Validated
 13-369 3.50e-166

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 469.16  E-value: 3.50e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00016  22 LPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00016 102 GIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFA 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00016 182 LHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00016 262 PLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGG 341

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFISNPIMGWMENKIMK 369
Cdd:MTH00016 342 RPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00022
cytochrome b; Validated
 13-370 3.93e-154

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 438.75  E-value: 3.93e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00022  20 LPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGR 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00022 100 GLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFS 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00022 180 LHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQAN 259

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00022 260 SLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGS 339

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 14194558  333 KPVEPPFTTISQAAALMYFLFF-ISNPIMGWMENKIMKM 370
Cdd:MTH00022 340 QVVEEPFILIGQLLSFFYFFYFlVLIPLLGELENQLLFK 378
CYTB MTH00053
cytochrome b; Provisional
 13-370 8.38e-152

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 432.98  E-value: 8.38e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00053  22 LPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00053 102 GIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00053 182 LHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00053 262 PLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGG 341

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 14194558  333 KPVEPPFTTISQAAALMYFLFF-ISNPIMGWMENKIMKM 370
Cdd:MTH00053 342 QPVEEPYILIGQIASIFYFAYFlILMPLAGYLENKLLKL 380
CYTB MTH00224
cytochrome b; Provisional
 13-369 2.18e-148

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 424.33  E-value: 2.18e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00224  22 LPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00224 102 GLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00224 182 FHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00224 262 PLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGG 341

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFISNPIMGWMENKIMK 369
Cdd:MTH00224 342 RPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-364 1.85e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 361.42  E-value: 1.85e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  10 FGLLPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIH 89
Cdd:COG1290  27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  90 IARGLYYGSYlnKK----TWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDP 165
Cdd:COG1290 107 MFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 166 TLTRFFALH-FILPFGIISLSSLHIMLLHEEGSSNPLG----TNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPd 240
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP- 263

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 241 iFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIP--NKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFW 318
Cdd:COG1290 264 -INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 14194558 319 TFTATFLVITWTATKPvePPFTTISQAAALMYFLFFISN-PIMGWME 364
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVlPILAFIE 387
CYTB MTH00033
cytochrome b; Provisional
 13-365 1.67e-115

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 340.76  E-value: 1.67e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00033  18 LPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGR 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00033  98 GLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFS 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLtMMITLLLMIVSFFPDI---FNDPDNFS 249
Cdd:MTH00033 178 LHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGF-LILFGVFVIIGIEPRIetlLQDPENFI 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  250 KANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITW 329
Cdd:MTH00033 257 QANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTW 336

                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 14194558  330 TATKPV-EPPFTTISQAAALMYF-LFFISNPIMGWMEN 365
Cdd:MTH00033 337 IGSAPAgADPYVLIGRIATIFYFgYFLVLVPLLGYLSN 374
CYTB MTH00086
cytochrome b; Provisional
 13-355 1.18e-105

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 314.57  E-value: 1.18e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00086  10 LPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFK 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00086  90 GLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFV 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLtMMITLLLMIVSFFPDIFNDPDNFSKAN 252
Cdd:MTH00086 170 LHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEAD 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSklrSMMFRPFMQLMFWTFTATFLVITWTAT 332
Cdd:MTH00086 249 PMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQ 325

                        330       340
                 ....*....|....*....|...
gi 14194558  333 KPVEPPFTTISQAAALMYFLFFI 355
Cdd:MTH00086 326 CLVEYPFLFLSQIFSFIYFFLIL 348
CYTB MTH00046
cytochrome b; Validated
 13-355 5.18e-81

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 251.44  E-value: 5.18e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00046  12 LPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGR 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   93 GLYYGSYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00046  92 ALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFS 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  173 LHFILPFGIISLSSLHIMLLHEEGSSNPL-GTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKA 251
Cdd:MTH00046 172 VHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEA 251

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  252 NPLVTPQHIKPEWYFLFAYGILRSIPNKLGGaLALTMSIMVLLAVPFTHTSKLRSMmfrpFMQLMFWTFTATFLVITWTA 331
Cdd:MTH00046 252 DPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVSLFFSLSYLG 326

                        330       340
                 ....*....|....*....|....*
gi 14194558  332 TKPVEPPFTTISQAAA-LMYFLFFI 355
Cdd:MTH00046 327 GCHPEYPYLLISQLFSvLMVLLLFI 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 13-198 2.61e-73

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 226.48  E-value: 2.61e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:cd00284  13 LPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFR 92

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  93 GLYYGSYLN--KKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRF 170
Cdd:cd00284  93 GLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRF 172

                       170       180
                ....*....|....*....|....*...
gi 14194558 171 FALHFILPFGIISLSSLHIMLLHEEGSS 198
Cdd:cd00284 173 FALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
13-196 1.98e-68

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 213.40  E-value: 1.98e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    13 LPVATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIAR 92
Cdd:pfam00033   4 LPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFR 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    93 GLYYG--SYLNKKTWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRF 170
Cdd:pfam00033  84 GLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRF 163

                         170       180
                  ....*....|....*....|....*.
gi 14194558   171 FALHFILPFGIISLSSLHIMLLHEEG 196
Cdd:pfam00033 164 FSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 199-346 1.65e-41

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 142.40  E-value: 1.65e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 199 NPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVSFFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPN 278
Cdd:cd00290   1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14194558 279 KLGGALALTMSIMVLLAVPFTHTSKLRSmMFRPFMQLMFWTFTATFLVITWTATKPVEPPFTTISQAA 346
Cdd:cd00290  81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
80-239 3.33e-39

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 137.37  E-value: 3.33e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558    80 SMFFICIYIHIARGLYYGSYLNKK--TWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLW 157
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   158 GGFAINDPTLTRFFALHF-ILPFGIISLSSLHIMLLHEEGSSNPLGTNSDIDKIPFHPYHTYKDLLMLTMMITLLLMIVS 236
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ...
gi 14194558   237 FFP 239
Cdd:pfam13631 161 INP 163
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
251-350 3.49e-38

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 132.22  E-value: 3.49e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHTSKLRSMMFRPFMQLMFWTFTATFLVITWT 330
Cdd:pfam00032   2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81

                          90       100
                  ....*....|....*....|
gi 14194558   331 ATKPVEPPFTTISQAAALMY 350
Cdd:pfam00032  82 GKQPPTGPYTLLGQIATVYY 101
PRK03735 PRK03735
cytochrome b6; Provisional
 25-201 4.22e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 128.29  E-value: 4.22e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   25 FGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIARGLYYGSYlnKK- 103
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGY--KKp 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  104 ---TWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFALH-FILPF 179
Cdd:PRK03735 122 relNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPW 201

                        170       180
                 ....*....|....*....|..
gi 14194558  180 GIISLSSLHIMLLHEEGSSNPL 201
Cdd:PRK03735 202 ALAVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 15-201 1.04e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 116.36  E-value: 1.04e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   15 VATNISTWWNFGSMLLTCSMLQVLTGFFLAMHYTANINMAFSSIIHIIRDVPYGWLMQNLHAIGASMFFICIYIHIARGL 94
Cdd:CHL00070  26 VPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVY 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   95 YYGSYLNKK--TWLSGTTLLIMLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGNTMTTWLWGGFAINDPTLTRFFA 172
Cdd:CHL00070 106 LTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                        170       180       190
                 ....*....|....*....|....*....|
gi 14194558  173 LH-FILPFGIISLSSLHIMLLHEEGSSNPL 201
Cdd:CHL00070 186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 250-340 8.19e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 56.93  E-value: 8.19e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558  250 KANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPF-THTSKLRSMMFRPFMQLMFW--TFTATFLV 326
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlENVNKFQNPFRRPVATTVFLigTAVALWLG 144

                         90
                 ....*....|....
gi 14194558  327 ItwTATKPVEPPFT 340
Cdd:CHL00058 145 I--GATLPIDKSLT 156
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 251-340 9.74e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.73  E-value: 9.74e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558   251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHT-SKLRSMMFRPFMQLMFWTFTATFLVITW 329
Cdd:TIGR01156  66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVATTVFLFGTVVALWLGI 145

                          90
                  ....*....|.
gi 14194558   330 TATKPVEPPFT 340
Cdd:TIGR01156 146 GATLPIDKSLT 156
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 239-340 4.36e-09

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 55.18  E-value: 4.36e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14194558 239 PDIFNDPdnfskANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIMVLLAVPFTHT-SKLRSMMFRPFMQLMF 317
Cdd:COG5679  60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPFRRPVATAVF 134

                        90       100
                ....*....|....*....|...
gi 14194558 318 WTFTATFLVITWTATKPVEPPFT 340
Cdd:COG5679 135 LFGTLVTLWLGIGAALPIDKSLT 157
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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