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Conserved domains on  [gi|1036601538|gb|OBA09648|]
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chemotaxis protein [Bacillus subtilis]

Protein Classification

methyl-accepting chemotaxis protein( domain architecture ID 11435591)

methyl-accepting chemotaxis protein (MCP) is a bacterial receptor that mediates chemotaxis to diverse signals, responding to changes in the concentration of attractants and repellents in the environment by altering swimming behavior

CATH:  1.10.287.950
Gene Ontology:  GO:0006935
PubMed:  18165013|20738376
SCOP:  4003862

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tar COG0840
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
123-280 5.62e-32

Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];


:

Pssm-ID: 440602 [Multi-domain]  Cd Length: 533  Bit Score: 123.59  E-value: 5.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 123 DVAESLSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESG 202
Cdd:COG0840   316 ELAEEASELAEEGGEVVEEAVEGIEEIRESVEETAETIEELGESSQEIGEIVDVIDDIAEQTNLLALNAAIEAARAGEAG 395

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036601538 203 KGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:COG0840   396 RGFAVVADEVRKLAERSAEATKEIEELIEEIQSETEEAVEAMEEGSEEVEEGVELVEEAGEALEEIVEAVEEVSDLIQ 473
 
Name Accession Description Interval E-value
Tar COG0840
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
123-280 5.62e-32

Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];


Pssm-ID: 440602 [Multi-domain]  Cd Length: 533  Bit Score: 123.59  E-value: 5.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 123 DVAESLSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESG 202
Cdd:COG0840   316 ELAEEASELAEEGGEVVEEAVEGIEEIRESVEETAETIEELGESSQEIGEIVDVIDDIAEQTNLLALNAAIEAARAGEAG 395

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036601538 203 KGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:COG0840   396 RGFAVVADEVRKLAERSAEATKEIEELIEEIQSETEEAVEAMEEGSEEVEEGVELVEEAGEALEEIVEAVEEVSDLIQ 473
MCP_signal cd11386
Methyl-accepting chemotaxis protein (MCP), signaling domain; Methyl-accepting chemotaxis ...
 116-280 3.66e-31

Methyl-accepting chemotaxis protein (MCP), signaling domain; Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.


Pssm-ID: 206779 [Multi-domain]  Cd Length: 200  Bit Score: 115.03  E-value: 3.66e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 116 EESSKLHDVAES---LSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVS-------ESAGEIADISVTVKGISDQSN 185
Cdd:cd11386     2 ELSASIEEVAASadqVAETSQQAAELAEKGREAAEDAINQMNQIDESVDEAVsaveeleESSAEIGEIVEVIDDIAEQTN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 186 LLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQ----ITKKIHSLLKGLEE-----------------SI 244
Cdd:cd11386    82 LLALNAAIEAARAGEAGRGFAVVADEVRKLAEESAEAAKEIEElieeIQEQTEEAVEAMEEtseeveegvelveetgrAF 161

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1036601538 245 ESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:cd11386   162 EEIVASVEEVADGIQEISAATQEQSASTQEIAAAVE 197
MA smart00283
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo ...
 114-281 5.75e-27

Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.


Pssm-ID: 214599 [Multi-domain]  Cd Length: 262  Bit Score: 105.45  E-value: 5.75e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  114 SLEESSKLHDVAES---LSAVVEQTAAAISDISESingfSSQMTGISSQAKKV-------------------------SE 165
Cdd:smart00283  13 AEEQAEELEELAERmeeLSASIEEVAANADEIAAT----AQSAAEAAEEGREAvedaitamdqirevveeavsaveelEE 88

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  166 SAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIE 245
Cdd:smart00283  89 SSDEIGEIVSVIDDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERSAESAKEIESLIKEIQEETNEAVAAME 168

                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1036601538  246 SINQHTDGQAAAVEQISATMQEISGSAQHLAKMAEK 281
Cdd:smart00283 169 ESSSEVEEGVELVEETGDALEEIVDSVEEIADLVQE 204
MCPsignal pfam00015
Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to ...
 152-280 2.27e-23

Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs.


Pssm-ID: 333767 [Multi-domain]  Cd Length: 172  Bit Score: 93.65  E-value: 2.27e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 152 QMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITK 231
Cdd:pfam00015  17 EVANVVGQMEQIAQSSKKISDIISVIDEIAFQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERSAQAAKEIEALII 96

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036601538 232 KIHSLLKGLEESIESINQHTD--------------GQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:pfam00015  97 EIQKQTNDSTASIESTRQRVEvgstivestgealkEIVDAVAEIADIVQEIAAASDEQSAGID 159
PRK09793 PRK09793
methyl-accepting chemotaxis protein IV;
126-282 1.33e-16

methyl-accepting chemotaxis protein IV;


Pssm-ID: 182079 [Multi-domain]  Cd Length: 533  Bit Score: 79.35  E-value: 1.33e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 126 ESLSAVVEQTA---AAISDISESINGFSS----QMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARA 198
Cdd:PRK09793  306 EQLTATVGQNAdnaRQASELAKNAATTAQaggvQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARA 385

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 199 GESGKGFSVVADEIRKLATHS-----------KENVGQIDQITKKIHSLLKGLEESIESINQ----------HTDGQAAA 257
Cdd:PRK09793  386 GEQGRGFAVVAGEVRNLASRSaqaakeikgliEESVNRVQQGSKLVNNAAATMTDIVSSVTRvndimgeiasASEEQRRG 465

                         170       180
                  ....*....|....*....|....*
gi 1036601538 258 VEQISATMQEISGSAQHLAKMAEKA 282
Cdd:PRK09793  466 IEQVAQAVSQMDQVTQQNASLVEEA 490
 
Name Accession Description Interval E-value
Tar COG0840
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
123-280 5.62e-32

Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];


Pssm-ID: 440602 [Multi-domain]  Cd Length: 533  Bit Score: 123.59  E-value: 5.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 123 DVAESLSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESG 202
Cdd:COG0840   316 ELAEEASELAEEGGEVVEEAVEGIEEIRESVEETAETIEELGESSQEIGEIVDVIDDIAEQTNLLALNAAIEAARAGEAG 395

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036601538 203 KGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:COG0840   396 RGFAVVADEVRKLAERSAEATKEIEELIEEIQSETEEAVEAMEEGSEEVEEGVELVEEAGEALEEIVEAVEEVSDLIQ 473
MCP_signal cd11386
Methyl-accepting chemotaxis protein (MCP), signaling domain; Methyl-accepting chemotaxis ...
 116-280 3.66e-31

Methyl-accepting chemotaxis protein (MCP), signaling domain; Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.


Pssm-ID: 206779 [Multi-domain]  Cd Length: 200  Bit Score: 115.03  E-value: 3.66e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 116 EESSKLHDVAES---LSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVS-------ESAGEIADISVTVKGISDQSN 185
Cdd:cd11386     2 ELSASIEEVAASadqVAETSQQAAELAEKGREAAEDAINQMNQIDESVDEAVsaveeleESSAEIGEIVEVIDDIAEQTN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 186 LLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQ----ITKKIHSLLKGLEE-----------------SI 244
Cdd:cd11386    82 LLALNAAIEAARAGEAGRGFAVVADEVRKLAEESAEAAKEIEElieeIQEQTEEAVEAMEEtseeveegvelveetgrAF 161

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1036601538 245 ESINQHTDGQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:cd11386   162 EEIVASVEEVADGIQEISAATQEQSASTQEIAAAVE 197
MA smart00283
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo ...
 114-281 5.75e-27

Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.


Pssm-ID: 214599 [Multi-domain]  Cd Length: 262  Bit Score: 105.45  E-value: 5.75e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  114 SLEESSKLHDVAES---LSAVVEQTAAAISDISESingfSSQMTGISSQAKKV-------------------------SE 165
Cdd:smart00283  13 AEEQAEELEELAERmeeLSASIEEVAANADEIAAT----AQSAAEAAEEGREAvedaitamdqirevveeavsaveelEE 88

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  166 SAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIE 245
Cdd:smart00283  89 SSDEIGEIVSVIDDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERSAESAKEIESLIKEIQEETNEAVAAME 168

                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1036601538  246 SINQHTDGQAAAVEQISATMQEISGSAQHLAKMAEK 281
Cdd:smart00283 169 ESSSEVEEGVELVEETGDALEEIVDSVEEIADLVQE 204
MCPsignal pfam00015
Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to ...
 152-280 2.27e-23

Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs.


Pssm-ID: 333767 [Multi-domain]  Cd Length: 172  Bit Score: 93.65  E-value: 2.27e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 152 QMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITK 231
Cdd:pfam00015  17 EVANVVGQMEQIAQSSKKISDIISVIDEIAFQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERSAQAAKEIEALII 96

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036601538 232 KIHSLLKGLEESIESINQHTD--------------GQAAAVEQISATMQEISGSAQHLAKMAE 280
Cdd:pfam00015  97 EIQKQTNDSTASIESTRQRVEvgstivestgealkEIVDAVAEIADIVQEIAAASDEQSAGID 159
MA smart00283
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo ...
 125-281 4.25e-23

Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.


Pssm-ID: 214599 [Multi-domain]  Cd Length: 262  Bit Score: 95.43  E-value: 4.25e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  125 AESLSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVS-------ESAGEIADISVTVKGISDQSNLLGLNAAIEAAR 197
Cdd:smart00283  41 ADEIAATAQSAAEAAEEGREAVEDAITAMDQIREVVEEAVsaveeleESSDEIGEIVSVIDDIADQTNLLALNAAIEAAR 120

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  198 AGESGKGFSVVADEIRKLATHSKENVGQIDQI-------------------------TKKIHSLLKGLEE---------- 242
Cdd:smart00283 121 AGEAGRGFAVVADEVRKLAERSAESAKEIESLikeiqeetneavaameessseveegVELVEETGDALEEivdsveeiad 200

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  243 SIESINQHTDGQAAAVEQISATMQEI---------------------SGSAQHLAKMAEK 281
Cdd:smart00283 201 LVQEIAAATDEQAAGSEEVNAAIDEIaqvtqetaamseeisaaaeelSGLAEELDELVER 260
MCPsignal pfam00015
Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to ...
 131-278 4.62e-18

Methyl-accepting chemotaxis protein (MCP) signalling domain; This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs.


Pssm-ID: 333767 [Multi-domain]  Cd Length: 172  Bit Score: 79.40  E-value: 4.62e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 131 VVEQTAAAISDISESINgfssqmtgissqakkvsesageiadisvtvkGISDQSNLLGLNAAIEAARAGESGKGFSVVAD 210
Cdd:pfam00015  27 QIAQSSKKISDIISVID-------------------------------EIAFQTNLLALNAAIEAARAGEQGRGFAVVAD 75

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036601538 211 EIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEISGSAQHLAKM 278
Cdd:pfam00015  76 EVRKLAERSAQAAKEIEALIIEIQKQTNDSTASIESTRQRVEVGSTIVESTGEALKEIVDAVAEIADI 143
PRK09793 PRK09793
methyl-accepting chemotaxis protein IV;
126-282 1.33e-16

methyl-accepting chemotaxis protein IV;


Pssm-ID: 182079 [Multi-domain]  Cd Length: 533  Bit Score: 79.35  E-value: 1.33e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 126 ESLSAVVEQTA---AAISDISESINGFSS----QMTGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARA 198
Cdd:PRK09793  306 EQLTATVGQNAdnaRQASELAKNAATTAQaggvQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARA 385

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 199 GESGKGFSVVADEIRKLATHS-----------KENVGQIDQITKKIHSLLKGLEESIESINQ----------HTDGQAAA 257
Cdd:PRK09793  386 GEQGRGFAVVAGEVRNLASRSaqaakeikgliEESVNRVQQGSKLVNNAAATMTDIVSSVTRvndimgeiasASEEQRRG 465

                         170       180
                  ....*....|....*....|....*
gi 1036601538 258 VEQISATMQEISGSAQHLAKMAEKA 282
Cdd:PRK09793  466 IEQVAQAVSQMDQVTQQNASLVEEA 490
PRK15048 PRK15048
methyl-accepting chemotaxis protein II; Provisional
 116-272 2.51e-16

methyl-accepting chemotaxis protein II; Provisional


Pssm-ID: 185008 [Multi-domain]  Cd Length: 553  Bit Score: 78.51  E-value: 2.51e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 116 EESSKLHDVA---ESLSAVVEQTA---AAISDISESINGFSSQ----MTGISSQAKKVSESAGEIADISVTVKGISDQSN 185
Cdd:PRK15048  295 QQASALEETAasmEQLTATVKQNAdnaRQASQLAQSASDTAQHggkvVDGVVKTMHEIADSSKKIADIISVIDGIAFQTN 374

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 186 LLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATM 265
Cdd:PRK15048  375 ILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIM 454


                  ....*..
gi 1036601538 266 QEISGSA 272
Cdd:PRK15048  455 GEIASAS 461
PRK15041 PRK15041
methyl-accepting chemotaxis protein;
114-272 1.01e-15

methyl-accepting chemotaxis protein;


Pssm-ID: 185001 [Multi-domain]  Cd Length: 554  Bit Score: 76.92  E-value: 1.01e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 114 SLEESSKlhdVAESLSAVVEQTAA--------AISdISESINGFSSQMTGISSQAKKVSESAGEIADISVTVKGISDQSN 185
Cdd:PRK15041  301 SLEETAA---SMEQLTATVKQNAEnarqashlALS-ASETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTN 376

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 186 LLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATM 265
Cdd:PRK15041  377 ILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIM 456


                  ....*..
gi 1036601538 266 QEISGSA 272
Cdd:PRK15041  457 GEIASAS 463
Tar COG0840
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
189-284 1.89e-05

Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];


Pssm-ID: 440602 [Multi-domain]  Cd Length: 533  Bit Score: 45.78  E-value: 1.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 189 LNAAIEAARAGEsgkgFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTDGQAAAVEQISATMQEI 268
Cdd:COG0840   225 LTVRIDVDSKDE----IGQLADAFNRMIENLRELVGQVRESAEQVASASEELAASAEELAAGAEEQAASLEETAAAMEEL 300

                          90
                  ....*....|....*.
gi 1036601538 269 SGSAQHLAKMAEKALE 284
Cdd:COG0840   301 SATVQEVAENAQQAAE 316
PHA03332 PHA03332
membrane glycoprotein; Provisional
 103-223 1.83e-03

membrane glycoprotein; Provisional


Pssm-ID: 223047 [Multi-domain]  Cd Length: 1328  Bit Score: 39.95  E-value: 1.83e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538  103 GKVIGGVGLG----------TSLEESSKLHDVAESLSAVVEQTAAAISDISESINGFSSQMTGISSQAKKVSESageIAD 172
Cdd:PHA03332   847 GSVMAGDAIGlsaaaftmasAALNAATQALAVATLYVNQLLQATAATAEMASKIGGLNARVDKTSDVITKLGDT---IAK 923

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1036601538  173 ISVTVkgisdQSNLLGLNAAIEAARAgESGKGFSVVADEIRKLATHSKENV 223
Cdd:PHA03332   924 ISATL-----DNNIRAVNGRVSDLED-QVNLRFLAVATNFNTLATQLKELG 968
Tar COG0840
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
119-270 3.19e-03

Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];


Pssm-ID: 440602 [Multi-domain]  Cd Length: 533  Bit Score: 38.85  E-value: 3.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036601538 119 SKLHDVAESLSAVVEQTAAAISDISESINGFSSqmtGISSQAKKVSESAGEIADISVTVKGISDQSNllglnaaiEAARa 198
Cdd:COG0840   249 ENLRELVGQVRESAEQVASASEELAASAEELAA---GAEEQAASLEETAAAMEELSATVQEVAENAQ--------QAAE- 316

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1036601538 199 gesgkgfsvVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQHTdgqaaavEQISATMQEISG 270
Cdd:COG0840   317 ---------LAEEASELAEEGGEVVEEAVEGIEEIRESVEETAETIEELGESS-------QEIGEIVDVIDD 372
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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