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Conserved domains on  [gi|1176771977|gb|OQY89853|]
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MAG: dihydrolipoyl dehydrogenase [Anaerolineae bacterium UTCFX1]

Protein Classification

dihydrolipoyl dehydrogenase( domain architecture ID 11482251)

dihydrolipoyl dehydrogenase catalyzes the oxidation of dihydrolipoamide to lipoamide and is often a component of multienzyme 2-oxo-acid dehydrogenase complexes

CATH:  3.50.50.60
EC:  1.8.1.4
Gene Ontology:  GO:0004148|GO:0016491|GO:0050660
PubMed:  8805537|10966480

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
1-461 0e+00

dihydrolipoamide dehydrogenase; Reviewed


:

Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 619.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSFDNLKLD 80
Cdd:PRK06416    1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLGGTCLNRGCIPSKALLHAAERADEARH-SEDFGIKAENVGID 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  81 YGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPGVKVDGKK 160
Cdd:PRK06416   80 FKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQT-YTAKNIILATGSRPRELPGIEIDGRV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 161 IVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFES 240
Cdd:PRK06416  159 IWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKK 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 241 IETSAAKVKVKL----PGETLEVSQVLVATAFTPNSKNLGLEAAGVKLsERGMVEINERMQTNVPGIWAIGDVTGKLMLA 316
Cdd:PRK06416  239 VEQTDDGVTVTLedggKEETLEADYVLVAVGRRPNTENLGLEELGVKT-DRGFIEVDEQLRTNVPNIYAIGDIVGGPMLA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 317 HVGSAMGIVCAENIAGvETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIV 396
Cdd:PRK06416  318 HKASAEGIIAAEAIAG-NPHPIDYRGIPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPFAGNGKALALGETDGFVKLI 396
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 397 MDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:PRK06416  397 FDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEAALAAAGKPLH 461
 
Name Accession Description Interval E-value
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
1-461 0e+00

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 619.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSFDNLKLD 80
Cdd:PRK06416    1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLGGTCLNRGCIPSKALLHAAERADEARH-SEDFGIKAENVGID 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  81 YGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPGVKVDGKK 160
Cdd:PRK06416   80 FKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQT-YTAKNIILATGSRPRELPGIEIDGRV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 161 IVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFES 240
Cdd:PRK06416  159 IWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKK 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 241 IETSAAKVKVKL----PGETLEVSQVLVATAFTPNSKNLGLEAAGVKLsERGMVEINERMQTNVPGIWAIGDVTGKLMLA 316
Cdd:PRK06416  239 VEQTDDGVTVTLedggKEETLEADYVLVAVGRRPNTENLGLEELGVKT-DRGFIEVDEQLRTNVPNIYAIGDIVGGPMLA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 317 HVGSAMGIVCAENIAGvETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIV 396
Cdd:PRK06416  318 HKASAEGIIAAEAIAG-NPHPIDYRGIPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPFAGNGKALALGETDGFVKLI 396
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 397 MDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:PRK06416  397 FDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEAALAAAGKPLH 461
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
2-457 0e+00

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 605.16  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLReRGKEFGFSFDNLKLDY 81
Cdd:COG1249     1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRLGGTCLNVGCIPSKALLHAAEVAHEAR-HAAEFGISAGAPSVDW 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  82 GAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVAlqdgKTTELKAKNFIIATGASAATLPGVKVDGKKI 161
Cdd:COG1249    80 AALMARKDKVVDRLRGGVEELLKKNGVDVIRGRARFVDPHTVEVT----GGETLTADHIVIATGSRPRVPPIPGLDEVRV 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 162 VTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESI 241
Cdd:COG1249   156 LTSDEALELEELPKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 242 ETSAAKVKVKLPG----ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAH 317
Cdd:COG1249   236 EKTGDGVTVTLEDgggeEAVEADKVLVATGRRPNTDGLGLEAAGVELDERGGIKVDEYLRTSVPGIYAIGDVTGGPQLAH 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 318 VGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVM 397
Cdd:COG1249   316 VASAEGRVAAENILGKKPRPVDYRAIPSVVFTDPEIASVGLTEEEAREAGIDVKVGKFPFAANGRALALGETEGFVKLIA 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 398 DEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEG 457
Cdd:COG1249   396 DAETGRILGAHIVGPHAGELIHEAALAMEMGLTVEDLADTIHAHPTLSEALKEAALALLG 455
lipoamide_DH TIGR01350
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ...
4-461 0e+00

dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.


Pssm-ID: 273568 [Multi-domain]  Cd Length: 460  Bit Score: 589.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSFDNLKLDYGA 83
Cdd:TIGR01350   1 AYDVIVIGGGPGGYVAAIRAAQLGLKVALVEKEYLGGTCLNVGCIPTKALLHSAEVYDEIKH-AKDLGIEVENVSVDWEK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  84 AFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPG-VKVDGKKIV 162
Cdd:TIGR01350  80 MQKRKNKVVKKLVGGVSGLLKKNKVTVIKGEAKFLDPGTVSVTGENGEET-LEAKNIIIATGSRPRSLPGpFDFDGKVVI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 163 TYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESIE 242
Cdd:TIGR01350 159 TSTGALNLEEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVLQKALKKKGVKILTNTKVTAVE 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 243 TSAAKVKVKLPG---ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAHVG 319
Cdd:TIGR01350 239 KNDDQVTYENKGgetETLTGEKVLVAVGRKPNTEGLGLEKLGVELDERGRIVVDEYMRTNVPGIYAIGDVIGGPMLAHVA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 320 SAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVMDE 399
Cdd:TIGR01350 319 SHEGIVAAENIAGKEPAHIDYDAVPSVIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAANGKALALGETDGFVKIIADK 398
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1176771977 400 KYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:TIGR01350 399 KTGEILGAHIIGPHATELISEAALAMELEGTVEELARTIHPHPTLSEAIKEAALAALGKPIH 460
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
5-323 2.76e-84

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 261.10  E-value: 2.76e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDkqwLGGVCLNVGCIPSKSLLKNADVAHTLRERGKefgfsfdnlkldygaA 84
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE---DEGTCPYGGCVLSKALLGAAEAPEIASLWAD---------------L 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDallvaLQDGKTTELKAKNFIIATGASAATL--PGVK---VDGK 159
Cdd:pfam07992  63 YKRKEEVVKKLNNGIEVLLGTEVVSIDPGAKKVVLEE-----LVDGDGETITYDRLVIATGARPRLPpiPGVElnvGFLV 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 160 KIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFE 239
Cdd:pfam07992 138 RTLDSAEALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVK 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 240 SIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKnlGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVT-GKLMLAH 317
Cdd:pfam07992 218 EIIGDGDGVEVILKdGTEIDADLVVVAIGRRPNTE--LLEAAGLELDERGGIVVDEYLRTSVPGIYAAGDCRvGGPELAQ 295

                  ....*.
gi 1176771977 318 VGSAMG 323
Cdd:pfam07992 296 NAVAQG 301
 
Name Accession Description Interval E-value
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
1-461 0e+00

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 619.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSFDNLKLD 80
Cdd:PRK06416    1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLGGTCLNRGCIPSKALLHAAERADEARH-SEDFGIKAENVGID 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  81 YGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPGVKVDGKK 160
Cdd:PRK06416   80 FKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQT-YTAKNIILATGSRPRELPGIEIDGRV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 161 IVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFES 240
Cdd:PRK06416  159 IWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKK 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 241 IETSAAKVKVKL----PGETLEVSQVLVATAFTPNSKNLGLEAAGVKLsERGMVEINERMQTNVPGIWAIGDVTGKLMLA 316
Cdd:PRK06416  239 VEQTDDGVTVTLedggKEETLEADYVLVAVGRRPNTENLGLEELGVKT-DRGFIEVDEQLRTNVPNIYAIGDIVGGPMLA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 317 HVGSAMGIVCAENIAGvETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIV 396
Cdd:PRK06416  318 HKASAEGIIAAEAIAG-NPHPIDYRGIPAVTYTHPEVASVGLTEAKAKEEGFDVKVVKFPFAGNGKALALGETDGFVKLI 396
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 397 MDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:PRK06416  397 FDKKDGEVLGAHMVGARASELIQEAQLAINWEATPEDLALTIHPHPTLSEALGEAALAAAGKPLH 461
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
2-457 0e+00

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 605.16  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLReRGKEFGFSFDNLKLDY 81
Cdd:COG1249     1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRLGGTCLNVGCIPSKALLHAAEVAHEAR-HAAEFGISAGAPSVDW 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  82 GAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVAlqdgKTTELKAKNFIIATGASAATLPGVKVDGKKI 161
Cdd:COG1249    80 AALMARKDKVVDRLRGGVEELLKKNGVDVIRGRARFVDPHTVEVT----GGETLTADHIVIATGSRPRVPPIPGLDEVRV 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 162 VTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESI 241
Cdd:COG1249   156 LTSDEALELEELPKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSV 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 242 ETSAAKVKVKLPG----ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAH 317
Cdd:COG1249   236 EKTGDGVTVTLEDgggeEAVEADKVLVATGRRPNTDGLGLEAAGVELDERGGIKVDEYLRTSVPGIYAIGDVTGGPQLAH 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 318 VGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVM 397
Cdd:COG1249   316 VASAEGRVAAENILGKKPRPVDYRAIPSVVFTDPEIASVGLTEEEAREAGIDVKVGKFPFAANGRALALGETEGFVKLIA 395
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 398 DEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEG 457
Cdd:COG1249   396 DAETGRILGAHIVGPHAGELIHEAALAMEMGLTVEDLADTIHAHPTLSEALKEAALALLG 455
lipoamide_DH TIGR01350
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ...
4-461 0e+00

dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.


Pssm-ID: 273568 [Multi-domain]  Cd Length: 460  Bit Score: 589.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSFDNLKLDYGA 83
Cdd:TIGR01350   1 AYDVIVIGGGPGGYVAAIRAAQLGLKVALVEKEYLGGTCLNVGCIPTKALLHSAEVYDEIKH-AKDLGIEVENVSVDWEK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  84 AFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPG-VKVDGKKIV 162
Cdd:TIGR01350  80 MQKRKNKVVKKLVGGVSGLLKKNKVTVIKGEAKFLDPGTVSVTGENGEET-LEAKNIIIATGSRPRSLPGpFDFDGKVVI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 163 TYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESIE 242
Cdd:TIGR01350 159 TSTGALNLEEVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRILPGEDAEVSKVLQKALKKKGVKILTNTKVTAVE 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 243 TSAAKVKVKLPG---ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAHVG 319
Cdd:TIGR01350 239 KNDDQVTYENKGgetETLTGEKVLVAVGRKPNTEGLGLEKLGVELDERGRIVVDEYMRTNVPGIYAIGDVIGGPMLAHVA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 320 SAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVMDE 399
Cdd:TIGR01350 319 SHEGIVAAENIAGKEPAHIDYDAVPSVIYTDPEVASVGLTEEQAKEAGYDVKIGKFPFAANGKALALGETDGFVKIIADK 398
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1176771977 400 KYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:TIGR01350 399 KTGEILGAHIIGPHATELISEAALAMELEGTVEELARTIHPHPTLSEAIKEAALAALGKPIH 460
PRK06327 PRK06327
dihydrolipoamide dehydrogenase; Validated
1-462 1.23e-178

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235779 [Multi-domain]  Cd Length: 475  Bit Score: 508.31  E-value: 1.23e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVD-------KQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGFS 73
Cdd:PRK06327    1 MSKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEawknpkgKPALGGTCLNVGCIPSKALLASSEEFENAGHHFADHGIH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  74 FDNLKLDYGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDAL--LVALQDGKTTELKAKNFIIATGASAATL 151
Cdd:PRK06327   81 VDGVKIDVAKMIARKDKVVKKMTGGIEGLFKKNKITVLKGRGSFVGKTDAgyEIKVTGEDETVITAKHVIIATGSEPRHL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 152 PGVKVDGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIK 231
Cdd:PRK06327  161 PGVPFDNKIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLAAADEQVAKEAAKAFTKQGLD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 232 VKTGVKFESIETSAAKVKVKLPG-----ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAI 306
Cdd:PRK06327  241 IHLGVKIGEIKTGGKGVSVAYTDadgeaQTLEVDKLIVSIGRVPNTDGLGLEAVGLKLDERGFIPVDDHCRTNVPNVYAI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 307 GDVTGKLMLAHVGSAMGIVCAENIAGVETVaLDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGL 386
Cdd:PRK06327  321 GDVVRGPMLAHKAEEEGVAVAERIAGQKGH-IDYNTIPWVIYTSPEIAWVGKTEQQLKAEGVEYKAGKFPFMANGRALAM 399
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1176771977 387 GESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIHL 462
Cdd:PRK06327  400 GEPDGFVKIIADAKTDEILGVHVIGPNASELIAEAVVAMEFKASSEDIARICHAHPTLSEVWHEAALAVDKRPLHF 475
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
3-461 1.17e-173

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 495.08  E-value: 1.17e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLReRGKEFGFSFDNLKLDYG 82
Cdd:PRK06292    2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLGGTCLNVGCIPSKALIAAAEAFHEAK-HAEEFGIHADGPKIDFK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  83 AAFKRSRQISDRLTKGVG-FLMKKNNVAVFSGEAKFTSKDALLValqdgKTTELKAKNFIIATGASAATLPGV-KVDGKK 160
Cdd:PRK06292   81 KVMARVRRERDRFVGGVVeGLEKKPKIDKIKGTARFVDPNTVEV-----NGERIEAKNIVIATGSRVPPIPGVwLILGDR 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 161 IVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRgIKVKTGVKFES 240
Cdd:PRK06292  156 LLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVTS 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 241 IETSAAKVKVKLPG----ETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLA 316
Cdd:PRK06292  235 VEKSGDEKVEELEKggktETIEADYVLVATGRRPNTDGLGLENTGIELDERGRPVVDEHTQTSVPGIYAAGDVNGKPPLL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 317 HVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIV 396
Cdd:PRK06292  315 HEAADEGRIAAENAAGDVAGGVRYHPIPSVVFTDPQIASVGLTEEELKAAGIDYVVGEVPFEAQGRARVMGKNDGFVKVY 394
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 397 MDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:PRK06292  395 ADKKTGRLLGAHIIGPDAEHLIHLLAWAMQQGLTVEDLLRMPFYHPTLSEGLRTALRDLFSKLIH 459
PRK06370 PRK06370
FAD-containing oxidoreductase;
1-448 7.18e-129

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 381.09  E-value: 7.18e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLReRGKEFGFSF-DNLKL 79
Cdd:PRK06370    2 PAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERGLLGGTCVNTGCVPTKTLIASARAAHLAR-RAAEYGVSVgGPVSV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  80 DYGAAFKRSRQISDRLTKGV-GFLMKKNNVAVFSGEAKFTSKDALLValqDGKTteLKAKNFIIATGASAATLPgvkVDG 158
Cdd:PRK06370   81 DFKAVMARKRRIRARSRHGSeQWLRGLEGVDVFRGHARFESPNTVRV---GGET--LRAKRIFINTGARAAIPP---IPG 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 159 KKIVTYV--EAIMQ-EKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTG 235
Cdd:PRK06370  153 LDEVGYLtnETIFSlDELPEHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPREDEDVAAAVREILEREGIDVRLN 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 236 VKFESIETSAAKVKVKLPGE----TLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTG 311
Cdd:PRK06370  233 AECIRVERDGDGIAVGLDCNggapEITGSHILVAVGRVPNTDDLGLEAAGVETDARGYIKVDDQLRTTNPGIYAAGDCNG 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 312 KLMLAHVGSAMGIVCAENiagvetvALDYDM-------MPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKAL 384
Cdd:PRK06370  313 RGAFTHTAYNDARIVAAN-------LLDGGRrkvsdriVPYATYTDPPLARVGMTEAEARKSGRRVLVGTRPMTRVGRAV 385
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1176771977 385 GLGESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEAL 448
Cdd:PRK06370  386 EKGETQGFMKVVVDADTDRILGATILGVHGDEMIHEILDAMYAGAPYTTLSRAIHIHPTVSELI 449
MerA TIGR02053
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon ...
5-452 1.97e-111

mercury(II) reductase; This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH. [Cellular processes, Detoxification]


Pssm-ID: 273944 [Multi-domain]  Cd Length: 463  Bit Score: 336.70  E-value: 1.97e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRErgKEFGFSFDNLKLDYGAA 84
Cdd:TIGR02053   1 YDLVIIGSGAAAFAAAIKAAELGASVAMVERGPLGGTCVNVGCVPSKMLLRAAEVAHYARK--PPFGGLAATVAVDFGEL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDRLTKG-VGFLMKKNNVAVFSGEAKFtsKDALLVALQDGKTTElKAKNFIIATGASAAT--LPGVKVDGkkI 161
Cdd:TIGR02053  79 LEGKREVVEELRHEkYEDVLSSYGVDYLRGRARF--KDPKTVKVDLGREVR-GAKRFLIATGARPAIppIPGLKEAG--Y 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 162 VTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESI 241
Cdd:TIGR02053 154 LTSEEALALDRIPESLAVIGGGAIGVELAQAFARLGSEVTILQRSDRLLPREEPEISAAVEEALAEEGIEVVTSAQVKAV 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 242 ETSAAKVKVKLPGE----TLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAH 317
Cdd:TIGR02053 234 SVRGGGKIITVEKPggqgEVEADELLVATGRRPNTDGLGLEKAGVKLDERGGILVDETLRTSNPGIYAAGDVTGGLQLEY 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 318 VGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVM 397
Cdd:TIGR02053 314 VAAKEGVVAAENALGGANAKLDLLVIPRVVFTDPAVASVGLTEAEAQKAGIECDCRTLPLTNVPRARINRDTRGFIKLVA 393
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 398 DEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAA 452
Cdd:TIGR02053 394 EPGTGKVLGVQVVAPEAAEVINEAALAIRAGMTVDDLIDTLHPFPTMAEGLKLAA 448
PRK07846 PRK07846
mycothione reductase; Reviewed
5-452 1.83e-88

mycothione reductase; Reviewed


Pssm-ID: 181142 [Multi-domain]  Cd Length: 451  Bit Score: 277.22  E-value: 1.83e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQlkQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKeFGFSFDNLKLDYGA- 83
Cdd:PRK07846    2 YDLIIIGTGSGNSILDERFAD--KRIAIVEKGTFGGTCLNVGCIPTKMFVYAADVARTIREAAR-LGVDAELDGVRWPDi 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  84 ---AFKRSRQISDrltKGVGFLMKKN-NVAVFSGEAKFTSKDALlvalQDGKTTELKAKNFIIATGaSAATLPGVKVDGK 159
Cdd:PRK07846   79 vsrVFGRIDPIAA---GGEEYRGRDTpNIDVYRGHARFIGPKTL----RTGDGEEITADQVVIAAG-SRPVIPPVIADSG 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 160 KIVTYVEAIMQ-EKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTkEFAKRGIKVKTGVKF 238
Cdd:PRK07846  151 VRYHTSDTIMRlPELPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDISERFT-ELASKRWDVRLGRNV 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 239 ESIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAH 317
Cdd:PRK07846  230 VGVSQDGSGVTLRLDdGSTVEADVLLVATGRVPNGDLLDAAAAGVDVDEDGRVVVDEYQRTSAEGVFALGDVSSPYQLKH 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 318 VGSAMGIVCAENIA-GVETVALDYDMMPRATYCQPQVASFGYTEAQAREKG--YAVKVGRFPFQANGKAlgLGESAGFVK 394
Cdd:PRK07846  310 VANHEARVVQHNLLhPDDLIASDHRFVPAAVFTHPQIASVGLTENEARAAGldITVKVQNYGDVAYGWA--MEDTTGFVK 387
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1176771977 395 IVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVH-AHPTLSEaLMEAA 452
Cdd:PRK07846  388 LIADRDTGRLLGAHIIGPQASTLIQPLIQAMSFGLDAREMARGQYwIHPALPE-VVENA 445
PRK06116 PRK06116
glutathione reductase; Validated
1-446 4.97e-88

glutathione reductase; Validated


Pssm-ID: 235701 [Multi-domain]  Cd Length: 450  Bit Score: 275.88  E-value: 4.97e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGFSFDNLKLD 80
Cdd:PRK06116    1 MTKDYDLIVIGGGSGGIASANRAAMYGAKVALIEAKRLGGTCVNVGCVPKKLMWYGAQIAEAFHDYAPGYGFDVTENKFD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  81 YgAAFKRSRQ--IsDRLTKGVGFLMKKNNVAVFSGEAKFTskDALLVALQDGKTTelkAKNFIIATGASAA--TLPGVKV 156
Cdd:PRK06116   81 W-AKLIANRDayI-DRLHGSYRNGLENNGVDLIEGFARFV--DAHTVEVNGERYT---ADHILIATGGRPSipDIPGAEY 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 157 dgkkIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGV 236
Cdd:PRK06116  154 ----GITSDGFFALEELPKRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRGFDPDIRETLVEEMEKKGIRLHTNA 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 237 KFESIE-TSAAKVKVKLP-GETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLM 314
Cdd:PRK06116  230 VPKAVEkNADGSLTLTLEdGETLTVDCLIWAIGREPNTDGLGLENAGVKLNEKGYIIVDEYQNTNVPGIYAVGDVTGRVE 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 315 LAHVGSAMGIVCAENIAGVETVA-LDYDMMPRATYCQPQVASFGYTEAQAREKGYA--VKVGRFPFQANGKALGLGESAG 391
Cdd:PRK06116  310 LTPVAIAAGRRLSERLFNNKPDEkLDYSNIPTVVFSHPPIGTVGLTEEEAREQYGEdnVKVYRSSFTPMYTALTGHRQPC 389
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 392 FVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSE 446
Cdd:PRK06116  390 LMKLVVVGKEEKVVGLHGIGFGADEMIQGFAVAIKMGATKADFDNTVAIHPTAAE 444
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
4-447 1.62e-87

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 274.73  E-value: 1.62e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQW-LGGVCLNVGCIPSKsllknadvahTLRE--------RGKEFgFSF 74
Cdd:PRK05249    5 DYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRnVGGGCTHTGTIPSK----------ALREavlrligfNQNPL-YSS 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  75 DNLKLDYGAA--FKRSRQISDRLTKGV-GFLMKkNNVAVFSGEAKFTSKDALLVALQDGKTTELKAKNFIIATGASAATL 151
Cdd:PRK05249   74 YRVKLRITFAdlLARADHVINKQVEVRrGQYER-NRVDLIQGRARFVDPHTVEVECPDGEVETLTADKIVIATGSRPYRP 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 152 PGVKVDGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIK 231
Cdd:PRK05249  153 PDVDFDHPRIYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLSFLDDEISDALSYHLRDSGVT 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 232 VKTGVKFESIETSAAKVKVKL-PGETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVT 310
Cdd:PRK05249  233 IRHNEEVEKVEGGDDGVIVHLkSGKKIKADCLLYANGRTGNTDGLNLENAGLEADSRGQLKVNENYQTAVPHIYAVGDVI 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 311 GKLMLAhvGSAM--GIVCAENIAGVETVALdYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGE 388
Cdd:PRK05249  313 GFPSLA--SASMdqGRIAAQHAVGEATAHL-IEDIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRARFKELARAQIAGD 389
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 389 SAGFVKIVMDEKYGEILGAHMLGPEVTELLpeltlaHM----MEL--TPREIARNVHAHPTLSEA 447
Cdd:PRK05249  390 NVGMLKILFHRETLEILGVHCFGERATEII------HIgqaiMEQkgTIEYFVNTTFNYPTMAEA 448
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
5-323 2.76e-84

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 261.10  E-value: 2.76e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDkqwLGGVCLNVGCIPSKSLLKNADVAHTLRERGKefgfsfdnlkldygaA 84
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE---DEGTCPYGGCVLSKALLGAAEAPEIASLWAD---------------L 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDallvaLQDGKTTELKAKNFIIATGASAATL--PGVK---VDGK 159
Cdd:pfam07992  63 YKRKEEVVKKLNNGIEVLLGTEVVSIDPGAKKVVLEE-----LVDGDGETITYDRLVIATGARPRLPpiPGVElnvGFLV 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 160 KIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFE 239
Cdd:pfam07992 138 RTLDSAEALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVK 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 240 SIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKnlGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVT-GKLMLAH 317
Cdd:pfam07992 218 EIIGDGDGVEVILKdGTEIDADLVVVAIGRRPNTE--LLEAAGLELDERGGIVVDEYLRTSVPGIYAAGDCRvGGPELAQ 295

                  ....*.
gi 1176771977 318 VGSAMG 323
Cdd:pfam07992 296 NAVAQG 301
PRK13748 PRK13748
putative mercuric reductase; Provisional
7-452 2.70e-74

putative mercuric reductase; Provisional


Pssm-ID: 184298 [Multi-domain]  Cd Length: 561  Bit Score: 243.52  E-value: 2.70e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGF-----SFDNLKLdy 81
Cdd:PRK13748  101 VAVIGSGGAAMAAALKAVEQGARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIaatvpTIDRSRL-- 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  82 gAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTELKAKNFIIATGASAAT--LPGVKvdGK 159
Cdd:PRK13748  179 -LAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQTLIVRLNDGGERVVAFDRCLIATGASPAVppIPGLK--ET 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 160 KIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIielLPR--LLPREDEEISKELTKEFAKRGIKVKTGVK 237
Cdd:PRK13748  256 PYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSKVTI---LARstLFFREDPAIGEAVTAAFRAEGIEVLEHTQ 332
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 238 FESIETSAAKVKVKLPGETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLAH 317
Cdd:PRK13748  333 ASQVAHVDGEFVLTTGHGELRADKLLVATGRAPNTRSLALDAAGVTVNAQGAIVIDQGMRTSVPHIYAAGDCTDQPQFVY 412
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 318 VGSAMGIVCAENIAGVETvALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVM 397
Cdd:PRK13748  413 VAAAAGTRAAINMTGGDA-ALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVI 491
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 398 DEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAA 452
Cdd:PRK13748  492 EEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAA 546
PRK07251 PRK07251
FAD-containing oxidoreductase;
3-448 7.81e-71

FAD-containing oxidoreductase;


Pssm-ID: 180907 [Multi-domain]  Cd Length: 438  Bit Score: 230.79  E-value: 7.81e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIV--DKQWLGGVCLNVGCIPSKSLLKNAdvahtlrergkEFGFSFDNlkld 80
Cdd:PRK07251    2 LTYDLIVIGFGKAGKTLAAKLASAGKKVALVeeSKAMYGGTCINIGCIPTKTLLVAA-----------EKNLSFEQ---- 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  81 ygaAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTS-KDALLVALQDGKttELKAKNFIIATGASAATLP--GVKvD 157
Cdd:PRK07251   67 ---VMATKNTVTSRLRGKNYAMLAGSGVDLYDAEAHFVSnKVIEVQAGDEKI--ELTAETIVINTGAVSNVLPipGLA-D 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 158 GKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISkELTKEF-AKRGIKVKTGV 236
Cdd:PRK07251  141 SKHVYDSTGIQSLETLPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPREEPSVA-ALAKQYmEEDGITFLLNA 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 237 KFESIETSAAKVKVKLPGETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKLMLA 316
Cdd:PRK07251  220 HTTEVKNDGDQVLVVTEDETYRFDALLYATGRKPNTEPLGLENTDIELTERGAIKVDDYCQTSVPGVFAVGDVNGGPQFT 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 317 HVGSAMGIVCAENIAGVETVAL-DYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKI 395
Cdd:PRK07251  300 YISLDDFRIVFGYLTGDGSYTLeDRGNVPTTMFITPPLSQVGLTEKEAKEAGLPYAVKELLVAAMPRAHVNNDLRGAFKV 379
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1176771977 396 VMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEAL 448
Cdd:PRK07251  380 VVNTETKEILGATLFGEGSQEIINLITMAMDNKIPYTYFKKQIFTHPTMAENL 432
PRK07845 PRK07845
flavoprotein disulfide reductase; Reviewed
7-452 8.13e-70

flavoprotein disulfide reductase; Reviewed


Pssm-ID: 236112 [Multi-domain]  Cd Length: 466  Bit Score: 228.98  E-value: 8.13e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLReRGKEFGFSFDNL---KLDYGA 83
Cdd:PRK07845    4 IVIIGGGPGGYEAALVAAQLGADVTVIERDGLGGAAVLTDCVPSKTLIATAEVRTELR-RAAELGIRFIDDgeaRVDLPA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  84 AFKR--------SRQISDRLTKgvgflmkkNNVAVFSGEAKFTSK----DALLVALQDGKTTELKAKNFIIATGASAATL 151
Cdd:PRK07845   83 VNARvkalaaaqSADIRARLER--------EGVRVIAGRGRLIDPglgpHRVKVTTADGGEETLDADVVLIATGASPRIL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 152 PGVKVDGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIK 231
Cdd:PRK07845  155 PTAEPDGERILTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLPGEDADAAEVLEEVFARRGMT 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 232 VKTGVKFESIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDVT 310
Cdd:PRK07845  235 VLKRSRAESVERTGDGVVVTLTdGRTVEGSHALMAVGSVPNTAGLGLEEAGVELTPSGHITVDRVSRTSVPGIYAAGDCT 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 311 GKLMLAHVGSAMGIVCAENIAGvETVA-LDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGES 389
Cdd:PRK07845  315 GVLPLASVAAMQGRIAMYHALG-EAVSpLRLKTVASNVFTRPEIATVGVSQAAIDSGEVPARTVMLPLATNPRAKMSGLR 393
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1176771977 390 AGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAA 452
Cdd:PRK07845  394 DGFVKLFCRPGTGVVIGGVVVAPRASELILPIALAVQNRLTVDDLAQTFTVYPSLSGSITEAA 456
PTZ00153 PTZ00153
lipoamide dehydrogenase; Provisional
2-461 1.27e-65

lipoamide dehydrogenase; Provisional


Pssm-ID: 173442 [Multi-domain]  Cd Length: 659  Bit Score: 222.87  E-value: 1.27e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIV--DKQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGFSF----- 74
Cdd:PTZ00153  114 DEEYDVGIIGCGVGGHAAAINAMERGLKVIIFtgDDDSIGGTCVNVGCIPSKALLYATGKYRELKNLAKLYTYGIytnaf 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  75 ---------------DNLKLDYGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKT----TEL 135
Cdd:PTZ00153  194 kngkndpvernqlvaDTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKFCKNSEHVQVIYERGHIVDKNTIKSeksgKEF 273
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 136 KAKNFIIATGASAATLPGVKVDGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDE 215
Cdd:PTZ00153  274 KVKNIIIATGSTPNIPDNIEVDQKSVFTSDTAVKLEGLQNYMGIVGMGIIGLEFMDIYTALGSEVVSFEYSPQLLPLLDA 353
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 216 EISKELTKEFAK-RGIKVKTGVKFESIETSAAKVKVKL------PGET------------LEVSQVLVATAFTPNSKNLG 276
Cdd:PTZ00153  354 DVAKYFERVFLKsKPVRVHLNTLIEYVRAGKGNQPVIIghserqTGESdgpkknmndikeTYVDSCLVATGRKPNTNNLG 433
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 277 LEAAGVKLsERGMVEINERMQTN------VPGIWAIGDVTGKLMLAHVGSAMGIVCAENIAGVETVALD----------- 339
Cdd:PTZ00153  434 LDKLKIQM-KRGFVSVDEHLRVLredqevYDNIFCIGDANGKQMLAHTASHQALKVVDWIEGKGKENVNinvenwaskpi 512
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 340 -YDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFP--FQANGKALGLGE----------------------SAGFVK 394
Cdd:PTZ00153  513 iYKNIPSVCYTTPELAFIGLTEKEAKELYPPDNVGVEIsfYKANSKVLCENNisfpnnsknnsynkgkyntvdnTEGMVK 592
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 395 IVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAAHGAEGSPIH 461
Cdd:PTZ00153  593 IVYLKDTKEILGMFIVGSYASILIHEGVLAINLKLSVKDLAHMVHSHPTISEVLDAAFKAIAGVRTH 659
PLN02507 PLN02507
glutathione reductase
4-449 5.10e-61

glutathione reductase


Pssm-ID: 215281 [Multi-domain]  Cd Length: 499  Bit Score: 206.98  E-value: 5.10e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAI-------VDKQWLGGV---CLNVGCIPSKSLLKNADVAHTLrERGKEFGFS 73
Cdd:PLN02507   25 DFDLFVIGAGSGGVRAARFSANFGAKVGIcelpfhpISSESIGGVggtCVIRGCVPKKILVYGATFGGEF-EDAKNYGWE 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  74 FdNLKLDYG---AAFKRSRQISdRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTELKAKNFIIATGASAAT 150
Cdd:PLN02507  104 I-NEKVDFNwkkLLQKKTDEIL-RLNGIYKRLLANAGVKLYEGEGKIVGPNEVEVTQLDGTKLRYTAKHILIATGSRAQR 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 151 LpgvKVDGKKI-VTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRG 229
Cdd:PLN02507  182 P---NIPGKELaITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRAVVARNLEGRG 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 230 IKVKTGVKFESIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGD 308
Cdd:PLN02507  259 INLHPRTNLTQLTKTEGGIKVITDhGEEFVADVVLFATGRAPNTKRLNLEAVGVELDKAGAVKVDEYSRTNIPSIWAIGD 338
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 309 VTGKLMLAHVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYA-VKVGRFPFQANGKALGLG 387
Cdd:PLN02507  339 VTNRINLTPVALMEGTCFAKTVFGGQPTKPDYENVACAVFCIPPLSVVGLSEEEAVEQAKGdILVFTSSFNPMKNTISGR 418
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1176771977 388 ESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALM 449
Cdd:PLN02507  419 QEKTVMKLIVDAETDKVLGASMCGPDAPEIMQGIAVALKCGATKAQFDSTVGIHPSAAEEFV 480
PRK08010 PRK08010
pyridine nucleotide-disulfide oxidoreductase; Provisional
5-448 2.85e-60

pyridine nucleotide-disulfide oxidoreductase; Provisional


Pssm-ID: 181196 [Multi-domain]  Cd Length: 441  Bit Score: 203.32  E-value: 2.85e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ--WLGGVCLNVGCIPSKSLLKNADvAHTlrergkefgfsfdnlklDYG 82
Cdd:PRK08010    4 YQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSnaMYGGTCINIGCIPTKTLVHDAQ-QHT-----------------DFV 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  83 AAFKRSRQIsdrltkgVGFLMKKN--------NVAVFSGEAKFTSKDALLVaLQDGKTTELKAKNFIIATGASA------ 148
Cdd:PRK08010   66 RAIQRKNEV-------VNFLRNKNfhnladmpNIDVIDGQAEFINNHSLRV-HRPEGNLEIHGEKIFINTGAQTvvppip 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 149 --ATLPGVkVDGKKIVTYVEaimqekLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFA 226
Cdd:PRK08010  138 giTTTPGV-YDSTGLLNLKE------LPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILR 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 227 KRGIKVKTGVKFESIETSAAKVKVKLPGETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAI 306
Cdd:PRK08010  211 DQGVDIILNAHVERISHHENQVQVHSEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKYLHTTADNIWAM 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 307 GDVTGKLMLAHVG-SAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALG 385
Cdd:PRK08010  291 GDVTGGLQFTYISlDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARV 370
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1176771977 386 LGESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELtPREIARN-VHAHPTLSEAL 448
Cdd:PRK08010  371 MNDTRGVLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGL-PYSILRDqIFTHPSMSESL 433
trypano_reduc TIGR01423
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of ...
5-448 7.48e-58

trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.


Pssm-ID: 200098 [Multi-domain]  Cd Length: 486  Bit Score: 198.27  E-value: 7.48e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQL-KQKVAIVDKQ---------WLGGVCLNVGCIPSKSLLKNADVAHTLRERGKeFGFSF 74
Cdd:TIGR01423   4 FDLVVIGAGSGGLEAGWNAATLyKKRVAVVDVQthhgppfyaALGGTCVNVGCVPKKLMVTGAQYMDTLRESAG-FGWEF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  75 D--NLKLDYGAAFK-RSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLV---ALQDGKTTE-LKAKNFIIATGaS 147
Cdd:TIGR01423  83 DrsSVKANWKALIAaKNKAVLDINKSYEGMFADTEGLTFFLGWGALEDKNVVLVresADPKSAVKErLQAEHILLATG-S 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 148 AATLPGVKVDgKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSY---GVDVTIIELLPRLLPREDEEISKELTKE 224
Cdd:TIGR01423 162 WPQMLGIPGI-EHCISSNEAFYLDEPPRRVLTVGGGFISVEFAGIFNAYkprGGKVTLCYRNNMILRGFDSTLRKELTKQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 225 FAKRGIKVKTGVKFESIE--TSAAKVKVKLPGETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPG 302
Cdd:TIGR01423 241 LRANGINIMTNENPAKVTlnADGSKHVTFESGKTLDVDVVMMAIGRVPRTQTLQLDKVGVELTKKGAIQVDEFSRTNVPN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 303 IWAIGDVTGKLMLAHVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGK 382
Cdd:TIGR01423 321 IYAIGDVTDRVMLTPVAINEGAAFVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLVEEDAAKKFEKVAVYESSFTPLMH 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 383 ALGLGESAGFV-KIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEAL 448
Cdd:TIGR01423 401 NISGSKYKKFVaKIVTNHADGTVLGVHLLGDSSPEIIQAVGICLKLNAKISDFYNTIGVHPTSAEEL 467
PLN02546 PLN02546
glutathione reductase
4-446 2.01e-55

glutathione reductase


Pssm-ID: 215301 [Multi-domain]  Cd Length: 558  Bit Score: 193.17  E-value: 2.01e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQW----------LGGVCLNVGCIPSKSLLKNADVAHTLRE-RGkeFGF 72
Cdd:PLN02546   79 DFDLFTIGAGSGGVRASRFASNFGASAAVCELPFatissdtlggVGGTCVLRGCVPKKLLVYASKYSHEFEEsRG--FGW 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  73 SFD-NLKLDYGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLValqDGKTteLKAKNFIIATGA--SAA 149
Cdd:PLN02546  157 KYEtEPKHDWNTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKIVDPHTVDV---DGKL--YTARNILIAVGGrpFIP 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 150 TLPGVKvdgkKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRG 229
Cdd:PLN02546  232 DIPGIE----HAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEVRDFVAEQMSLRG 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 230 IKVKTGVKFESIETSA-AKVKVKLPGETLE-VSQVLVATAFTPNSKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIG 307
Cdd:PLN02546  308 IEFHTEESPQAIIKSAdGSLSLKTNKGTVEgFSHVMFATGRKPNTKNLGLEEVGVKMDKNGAIEVDEYSRTSVPSIWAVG 387
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 308 DVTGKLMLAHVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLG 387
Cdd:PLN02546  388 DVTDRINLTPVALMEGGALAKTLFGNEPTKPDYRAVPSAVFSQPPIGQVGLTEEQAIEEYGDVDVFTANFRPLKATLSGL 467
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1176771977 388 ESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSE 446
Cdd:PLN02546  468 PDRVFMKLIVCAKTNKVLGVHMCGEDAPEIIQGFAVAVKAGLTKADFDATVGIHPTAAE 526
TGR TIGR01438
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ...
4-449 1.29e-52

thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.


Pssm-ID: 273624 [Multi-domain]  Cd Length: 484  Bit Score: 184.29  E-value: 1.29e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVD--------KQW-LGGVCLNVGCIPSKSLLKNADVAHTLRErGKEFGFSF 74
Cdd:TIGR01438   2 DYDLIVIGGGSGGLAAAKEAAAYGAKVMLLDfvtptplgTRWgIGGTCVNVGCIPKKLMHQAALLGQALKD-SRNYGWKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  75 DN-LKLDYgaafkrsrqisDRLTKGVGFLMKKNN-----------VAVFSGEAKFTSKDALLVALQDGKTTELKAKNFII 142
Cdd:TIGR01438  81 EEtVKHDW-----------KRLVEAVQNHIGSLNwgyrvalrekkVKYENAYAEFVDKHRIKATNKKGKEKIYSAERFLI 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 143 ATGASaATLPGVKVDGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIielLPRLLPRE--DEEISKE 220
Cdd:TIGR01438 150 ATGER-PRYPGIPGAKELCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTV---MVRSILLRgfDQDCANK 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 221 LTKEFAKRGIKVKTGVKFESIETSAAKVKVKLPGETLEVSQ----VLVATAFTPNSKNLGLEAAGVKLSER-GMVEINER 295
Cdd:TIGR01438 226 VGEHMEEHGVKFKRQFVPIKVEQIEAKVLVEFTDSTNGIEEeydtVLLAIGRDACTRKLNLENVGVKINKKtGKIPADEE 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 296 MQTNVPGIWAIGDVT-GKLMLAHVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGR 374
Cdd:TIGR01438 306 EQTNVPYIYAVGDILeDKPELTPVAIQAGRLLAQRLFKGSTVICDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENVEV 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 375 F-----PFQ----ANGKAlglgeSAGFVKIVMDEKYGE-ILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTL 444
Cdd:TIGR01438 386 FhsyfwPLEwtipSRDNH-----NKCYAKLVCNKKENErVVGFHVVGPNAGEVTQGFAAALRCGLTKKDLDNTIGIHPVC 460

                  ....*
gi 1176771977 445 SEALM 449
Cdd:TIGR01438 461 AEVFT 465
PTZ00058 PTZ00058
glutathione reductase; Provisional
5-452 6.07e-46

glutathione reductase; Provisional


Pssm-ID: 185420 [Multi-domain]  Cd Length: 561  Bit Score: 167.87  E-value: 6.07e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPsKSLLKNADVAHTLRERGKEFGFSFDnLKLDYGAA 84
Cdd:PTZ00058   49 YDLIVIGGGSGGMAAARRAARNKAKVALVEKDYLGGTCVNVGCVP-KKIMFNAASIHDILENSRHYGFDTQ-FSFNLPLL 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFTSKDALLV--------------------------ALQDGKTteLKAK 138
Cdd:PTZ00058  127 VERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIkkvsqvdgeadesdddevtivsagvsQLDDGQV--IEGK 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 139 NFIIATGASAATlPGVKvdGKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEIS 218
Cdd:PTZ00058  205 NILIAVGNKPIF-PDVK--GKEFTISSDDFFKIKEAKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLRKFDETII 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 219 KELTKEFAKRGIKVKTGVKFESIEtsaakvKVKLPGETLEVSQ---------VLVATAFTPNSKNLGLEAAGVKlSERGM 289
Cdd:PTZ00058  282 NELENDMKKNNINIITHANVEEIE------KVKEKNLTIYLSDgrkyehfdyVIYCVGRSPNTEDLNLKALNIK-TPKGY 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 290 VEINERMQTNVPGIWAIGDVTG----------------------------------KLMLAHVGSAMGIVCAENIAGVET 335
Cdd:PTZ00058  355 IKVDDNQRTSVKHIYAVGDCCMvkknqeiedlnllklyneepylkkkentsgesyyNVQLTPVAINAGRLLADRLFGPFS 434
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 336 VALDYDMMPRATYCQPQVASFGYTEAQAREKgYA---VKVGRFPFQANGKALGLGESAG----FVKIVMDEKYGEILGAH 408
Cdd:PTZ00058  435 RTTNYKLIPSVIFSHPPIGTIGLSEQEAIDI-YGkenVKIYESRFTNLFFSVYDMDPAQkektYLKLVCVGKEELIKGLH 513
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....
gi 1176771977 409 MLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALMEAA 452
Cdd:PTZ00058  514 IVGLNADEILQGFAVALKMNATKADFDETIPIHPTAAEEFVTMA 557
Pyr_redox_dim pfam02852
Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both ...
343-451 2.19e-40

Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases.


Pssm-ID: 427019 [Multi-domain]  Cd Length: 109  Bit Score: 140.38  E-value: 2.19e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 343 MPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANGKALGLGESAGFVKIVMDEKYGEILGAHMLGPEVTELLPELT 422
Cdd:pfam02852   1 IPSVVFTDPEIASVGLTEEEAKEKGGEVKVGKFPFAANGRALAYGDTDGFVKLVADRETGKILGAHIVGPNAGELIQEAA 80
                          90       100
                  ....*....|....*....|....*....
gi 1176771977 423 LAHMMELTPREIARNVHAHPTLSEALMEA 451
Cdd:pfam02852  81 LAIKMGATVEDLANTIHIHPTLSEALVEA 109
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
141-335 2.71e-40

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 146.88  E-value: 2.71e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 141 IIATGASAATL--PGVKVDGkkiVTYV----------EAIMQEKlPASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPR 208
Cdd:COG0446    83 VLATGARPRPPpiPGLDLPG---VFTLrtlddadalrEALKEFK-GKRAVVIGGGPIGLELAEALRKRGLKVTLVERAPR 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 209 LLPREDEEISKELTKEFAKRGIKVKTGVKFESIEtSAAKVKVKL-PGETLEVSQVLVATAFTPNSKnLgLEAAGVKLSER 287
Cdd:COG0446   159 LLGVLDPEMAALLEEELREHGVELRLGETVVAID-GDDKVAVTLtDGEEIPADLVVVAPGVRPNTE-L-AKDAGLALGER 235
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1176771977 288 GMVEINERMQTNVPGIWAIGD-------VTGK-LMLAHVGSA--MGIVCAENIAGVET 335
Cdd:COG0446   236 GWIKVDETLQTSDPDVYAAGDcaevphpVTGKtVYIPLASAAnkQGRVAAENILGGPA 293
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
141-365 1.93e-37

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 141.05  E-value: 1.93e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 141 IIATGASAATLPGVKVDGKKIVTY-----VEAIMQEKLPA-SVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPRE- 213
Cdd:COG1251   103 VLATGSRPRVPPIPGADLPGVFTLrtlddADALRAALAPGkRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRQl 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 214 DEEISKELTKEFAKRGIKVKTGVKFESIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKnLgLEAAGVKLsERGmVEI 292
Cdd:COG1251   183 DEEAGALLQRLLEALGVEVRLGTGVTEIEGDDRVTGVRLAdGEELPADLVVVAIGVRPNTE-L-ARAAGLAV-DRG-IVV 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 293 NERMQTNVPGIWAIGDV-------TGKLMLAHVGSA--MGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQA 363
Cdd:COG1251   259 DDYLRTSDPDIYAAGDCaehpgpvYGRRVLELVAPAyeQARVAAANLAGGPAAYEGSVPSTKLKVFGVDVASAGDAEGDE 338

                  ..
gi 1176771977 364 RE 365
Cdd:COG1251   339 EV 340
PTZ00052 PTZ00052
thioredoxin reductase; Provisional
5-449 1.35e-35

thioredoxin reductase; Provisional


Pssm-ID: 185416 [Multi-domain]  Cd Length: 499  Bit Score: 138.03  E-value: 1.35e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVD--------KQW-LGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGFSFD 75
Cdd:PTZ00052    6 YDLVVIGGGSGGMAAAKEAAAHGKKVALFDyvkpstqgTKWgLGGTCVNVGCVPKKLMHYAANIGSIFHHDSQMYGWKTS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  76 NlKLDYGAAFKRSRQISDRLTKGVGFLMKKNNVAVFSGEAKFtsKDALLVALQD-GKTTELKAKNFIIATGASAA---TL 151
Cdd:PTZ00052   86 S-SFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKL--KDEHTVSYGDnSQEETITAKYILIATGGRPSipeDV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 152 PGVKvdgKKIVTYVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTI-IELLP-RLLPREDEEISKELTKEfakRG 229
Cdd:PTZ00052  163 PGAK---EYSITSDDIFSLSKDPGKTLIVGASYIGLETAGFLNELGFDVTVaVRSIPlRGFDRQCSEKVVEYMKE---QG 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 230 IKVKTGVKFESIETSAAKVKVKLP-GETLEVSQVLVATAFTPNSKNLGLEAAGVKLSERGMVeINERMQTNVPGIWAIGD 308
Cdd:PTZ00052  237 TLFLEGVVPINIEKMDDKIKVLFSdGTTELFDTVLYATGRKPDIKGLNLNAIGVHVNKSNKI-IAPNDCTNIPNIFAVGD 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 309 VT-GKLMLAHVGSAMGIVCAENIAGVETVALDYDMMPRATYCQPQVASFGYTEAQAREKGYAVKVGRFPFQANG------ 381
Cdd:PTZ00052  316 VVeGRPELTPVAIKAGILLARRLFKQSNEFIDYTFIPTTIFTPIEYGACGYSSEAAIAKYGEDDIEEYLQEFNTleiaav 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 382 ---KALGLGESAG--------FVKIVMDEKYGE-ILGAHMLGPEVTELLPELTLAHMMELTPREIARNVHAHPTLSEALM 449
Cdd:PTZ00052  396 hreKHERARKDEYdfdvssncLAKLVCVKSEDNkVVGFHFVGPNAGEITQGFSLALKLGAKKSDFDSMIGIHPTDAEVFM 475
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
5-331 1.53e-26

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 108.67  E-value: 1.53e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCI------PSKslLKNADVAHTLRERGKEFGFSFdnlk 78
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGGQLATTKEIenypgfPEG--ISGPELAERLREQAERFGAEI---- 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  79 ldygaafkRSRQIsdrltkgvgflmkknnVAVFSGEAKFTskdallVALQDGktTELKAKNFIIATGASAATLP------ 152
Cdd:COG0492    75 --------LLEEV----------------TSVDKDDGPFR------VTTDDG--TEYEAKAVIIATGAGPRKLGlpgeee 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 153 ----GV----KVDGkkivtyveAIMQEKlpaSVAIIGGGAIGVEFATIWNSYGVDVTIIellprlLPREDEEISKEL-TK 223
Cdd:COG0492   123 fegrGVsycaTCDG--------FFFRGK---DVVVVGGGDSALEEALYLTKFASKVTLI------HRRDELRASKILvER 185
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 224 EFAKRGIKVKTGVKFESIETS----AAKVKVKLPGET--LEVSQVLVATAFTPNSKnlGLEAAGVKLSERGMVEINERMQ 297
Cdd:COG0492   186 LRANPKIEVLWNTEVTEIEGDgrveGVTLKNVKTGEEkeLEVDGVFVAIGLKPNTE--LLKGLGLELDEDGYIVVDEDME 263
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1176771977 298 TNVPGIWAIGDVT-GKLMLAHVGSAMGIVCAENIA 331
Cdd:COG0492   264 TSVPGVFAAGDVRdYKYRQAATAAGEGAIAALSAA 298
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
6-331 6.70e-23

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 99.82  E-value: 6.70e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAqlkqkvaivdkqwlggvclnvgcipsKSLLKNADVahTLRERGKEFGFSFdnLKLDYGAAF 85
Cdd:COG1252     3 RIVIVGGGFAGLEAARRLR--------------------------KKLGGDAEV--TLIDPNPYHLFQP--LLPEVAAGT 52
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  86 KRSRQISDRLTKgvgfLMKKNNVAVFSGEAKFTSKDALLVALQDGKTTE---LkaknfIIATGASAAT--LPGVKVDG-- 158
Cdd:COG1252    53 LSPDDIAIPLRE----LLRRAGVRFIQGEVTGIDPEARTVTLADGRTLSydyL-----VIATGSVTNFfgIPGLAEHAlp 123
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 159 -----------KKIVTYVEAIMQEKlPASVAIIGGGAIGVEFA--------TIWNSYGVD-----VTIIELLPRLLPRED 214
Cdd:COG1252   124 lktledalalrERLLAAFERAERRR-LLTIVVVGGGPTGVELAgelaellrKLLRYPGIDpdkvrITLVEAGPRILPGLG 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 215 EEISKELTKEFAKRGIKVKTGVKFESIEtsAAKVKVKlPGETLEVSQVLVATAFTPNS--KNLGLEaagvkLSERGMVEI 292
Cdd:COG1252   203 EKLSEAAEKELEKRGVEVHTGTRVTEVD--ADGVTLE-DGEEIPADTVIWAAGVKAPPllADLGLP-----TDRRGRVLV 274
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1176771977 293 NERMQT-NVPGIWAIGDV------TGKLM--LAHVGSAMGIVCAENIA 331
Cdd:COG1252   275 DPTLQVpGHPNVFAIGDCaavpdpDGKPVpkTAQAAVQQAKVLAKNIA 322
PRK09564 PRK09564
coenzyme A disulfide reductase; Reviewed
117-411 3.56e-22

coenzyme A disulfide reductase; Reviewed


Pssm-ID: 181958 [Multi-domain]  Cd Length: 444  Bit Score: 98.57  E-value: 3.56e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 117 FTSKDALLVALQDGKTTELKAKNFIIATGASAATLPGVKVDGKKIVT--------YVEAIMQEKLPASVAIIGGGAIGVE 188
Cdd:PRK09564   84 AKNKTITVKNLKTGSIFNDTYDKLMIATGARPIIPPIKNINLENVYTlksmedglALKELLKDEEIKNIVIIGAGFIGLE 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 189 FATIWNSYGVDVTIIELLPRLLPRE-DEEISKELTKEFAKRGIKVKTGVKFESIETSAAKVKVKLPGETLEVSQVLVATA 267
Cdd:PRK09564  164 AVEAAKHLGKNVRIIQLEDRILPDSfDKEITDVMEEELRENGVELHLNEFVKSLIGEDKVEGVVTDKGEYEADVVIVATG 243
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 268 FTPNSKnlGLEAAGVKLSERGMVEINERMQTNVPGIWAIGD-------VTGKLM---LAHVGSAMGIVCAENIAGVETV- 336
Cdd:PRK09564  244 VKPNTE--FLEDTGLKTLKNGAIIVDEYGETSIENIYAAGDcatiyniVSNKNVyvpLATTANKLGRMVGENLAGRHVSf 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 337 ----------ALDYDMmpratycqpqvASFGYTEAQAREKGYAVKVgRFPFQANGKALGLGESAGFVKIVMDEKYGEILG 406
Cdd:PRK09564  322 kgtlgsacikVLDLEA-----------ARTGLTEEEAKKLGIDYKT-VFIKDKNHTNYYPGQEDLYVKLIYEADTKVILG 389

                  ....*
gi 1176771977 407 AHMLG 411
Cdd:PRK09564  390 GQIIG 394
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
176-252 4.25e-21

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 86.87  E-value: 4.25e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 176 SVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGVKFESIETSAAKVKVKL 252
Cdd:pfam00070   1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEAIEGNGDGVVVVL 77
nitri_red_nirB TIGR02374
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ...
105-372 6.76e-19

nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]


Pssm-ID: 162827 [Multi-domain]  Cd Length: 785  Bit Score: 89.50  E-value: 6.76e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 105 KNNVAVFSGEAKFTSKDALLVALQDGKTTeLKAKNFIIATGASAATLPGVKVDGKKIVTY--------VEAIMQEKLPAs 176
Cdd:TIGR02374  66 KHGITLYTGETVIQIDTDQKQVITDAGRT-LSYDKLILATGSYPFILPIPGADKKGVYVFrtiedldaIMAMAQRFKKA- 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 177 vAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPRE-DEEISKELTKEFAKRGIKVKTGVKFESI--ETSAAKVKVKlP 253
Cdd:TIGR02374 144 -AVIGGGLLGLEAAVGLQNLGMDVSVIHHAPGLMAKQlDQTAGRLLQRELEQKGLTFLLEKDTVEIvgATKADRIRFK-D 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 254 GETLEVSQVLVATAFTPNSKnLGLEAaGVKLSeRGMVeINERMQTNVPGIWAIGDVTgklmlAHVGSAMGIVC------- 326
Cdd:TIGR02374 222 GSSLEADLIVMAAGIRPNDE-LAVSA-GIKVN-RGII-VNDSMQTSDPDIYAVGECA-----EHNGRVYGLVAplyeqak 292
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1176771977 327 --AENIAGVETVALD-YDMMPRATYCQPQVASFGytEAQAREKGYAVKV 372
Cdd:TIGR02374 293 vlADHICGVECEEYEgSDLSAKLKLLGVDVWSAG--DAQETERTTSIKI 339
PRK04965 PRK04965
NADH:flavorubredoxin reductase NorW;
141-314 2.12e-18

NADH:flavorubredoxin reductase NorW;


Pssm-ID: 179902 [Multi-domain]  Cd Length: 377  Bit Score: 86.51  E-value: 2.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 141 IIATGASAAtLPGVKVDGKkIVT------YVEAIMQEKLPASVAIIGGGAIGVEFATIWNSYGVDVTIIE----LLPRLL 210
Cdd:PRK04965  104 VLATGASAF-VPPIPGREL-MLTlnsqqeYRAAETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDnaasLLASLM 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 211 PredEEISKELTKEFAKRGIKVKTGVKFESIETSAAKVKVKL-PGETLEVSQVLVATAFTPnskNLGL-EAAGVKLsERG 288
Cdd:PRK04965  182 P---PEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIRATLdSGRSIEVDAVIAAAGLRP---NTALaRRAGLAV-NRG 254
                         170       180
                  ....*....|....*....|....*....
gi 1176771977 289 MVeINERMQTNVPGIWAIGD---VTGKLM 314
Cdd:PRK04965  255 IV-VDSYLQTSAPDIYALGDcaeINGQVL 282
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
3-310 1.05e-14

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 75.97  E-value: 1.05e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIV-DKqwLGGvclnvgcipsksllknaDVAHTLrergkefgfSFDNLkldy 81
Cdd:PRK15317  210 DPYDVLVVGGGPAGAAAAIYAARKGIRTGIVaER--FGG-----------------QVLDTM---------GIENF---- 257
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  82 gaafkrsrqISDRLTKGVGFL------MKKNNVAVFSGE--AKFTSKDALL-VALQDGKTteLKAKNFIIATGASAATL- 151
Cdd:PRK15317  258 ---------ISVPETEGPKLAaaleehVKEYDVDIMNLQraSKLEPAAGLIeVELANGAV--LKAKTVILATGARWRNMn 326
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 152 -PGVKVDGKKIVTYVeaimqeklP---------ASVAIIGGGAIGVEFAtiwnsygVD-------VTIIELLPRLlpRED 214
Cdd:PRK15317  327 vPGEDEYRNKGVAYC--------PhcdgplfkgKRVAVIGGGNSGVEAA-------IDlagivkhVTVLEFAPEL--KAD 389
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 215 EEISKEL-------------TKEFAKRGIKVkTGVKFESIETSAAKvkvklpgeTLEVSQVLVATAFTPNSKNLGleaAG 281
Cdd:PRK15317  390 QVLQDKLrslpnvtiitnaqTTEVTGDGDKV-TGLTYKDRTTGEEH--------HLELEGVFVQIGLVPNTEWLK---GT 457
                         330       340
                  ....*....|....*....|....*....
gi 1176771977 282 VKLSERGMVEINERMQTNVPGIWAIGDVT 310
Cdd:PRK15317  458 VELNRRGEIIVDARGATSVPGVFAAGDCT 486
PRK13512 PRK13512
coenzyme A disulfide reductase; Provisional
157-337 2.70e-13

coenzyme A disulfide reductase; Provisional


Pssm-ID: 184103 [Multi-domain]  Cd Length: 438  Bit Score: 71.35  E-value: 2.70e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 157 DGKKIVTYVEAIMQEKLPasvaIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKTGV 236
Cdd:PRK13512  135 DTDAIDQFIKANQVDKAL----VVGAGYISLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNE 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 237 KFESIETSAAKVKvklPGETLEVSQVLVATAFTPNSKNLglEAAGVKLSERGMVEINERMQTNVPGIWAIGDVTGKL--- 313
Cdd:PRK13512  211 EIDAINGNEVTFK---SGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDDKGFIPVNDKFETNVPNIYAIGDIITSHyrh 285
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1176771977 314 --MLAHVGSAMGI-----VCAENIAGVETVA 337
Cdd:PRK13512  286 vdLPASVPLAWGAhraasIVAEQIAGNDTIE 316
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
7-311 1.72e-12

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 69.01  E-value: 1.72e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ-WLGGVclnvgcipsksllknadvahtLRergkefgfsfdnlkldYG-AA 84
Cdd:COG0493   124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALdKPGGL---------------------LR----------------YGiPE 166
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDR----LTK-GVGFlmkKNNVAVfsgeakftskdallvalqdGKT---TELKAKnF---IIATGASAATLPG 153
Cdd:COG0493   167 FRLPKDVLDReielIEAlGVEF---RTNVEV-------------------GKDitlDELLEE-FdavFLATGAGKPRDLG 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 154 VK-VDGKKIVT---YVEAIMQEKLPAS-------VAIIGGG--AI---------GVEfatiwnsygvDVTIIELLPRL-L 210
Cdd:COG0493   224 IPgEDLKGVHSamdFLTAVNLGEAPDTilavgkrVVVIGGGntAMdcartalrlGAE----------SVTIVYRRTREeM 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 211 PREDEEIS--KE---------LTKEFAKRGIKVKTGVKFESIETSAAKVK-----VKLPGE--TLEVSQVLVATAFTPNS 272
Cdd:COG0493   294 PASKEEVEeaLEegveflflvAPVEIIGDENGRVTGLECVRMELGEPDESgrrrpVPIEGSefTLPADLVILAIGQTPDP 373
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1176771977 273 KNLgLEAAGVKLSERGMVEINER-MQTNVPGIWAIGD-VTG 311
Cdd:COG0493   374 SGL-EEELGLELDKRGTIVVDEEtYQTSLPGVFAGGDaVRG 413
PRK14989 PRK14989
nitrite reductase subunit NirD; Provisional
105-411 2.16e-11

nitrite reductase subunit NirD; Provisional


Pssm-ID: 184951 [Multi-domain]  Cd Length: 847  Bit Score: 66.30  E-value: 2.16e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 105 KNNVAVFSGEAKFT-SKDALLVALQDGKTteLKAKNFIIATGaSAATLPGVK-VDGKKIVTY-----VEAIMQ-EKLPAS 176
Cdd:PRK14989   71 KHGIKVLVGERAITiNRQEKVIHSSAGRT--VFYDKLIMATG-SYPWIPPIKgSETQDCFVYrtiedLNAIEAcARRSKR 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 177 VAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPRE-DEEISKELTKEFAKRGIKVKTGVKFESIE---TSAAKVKVKL 252
Cdd:PRK14989  148 GAVVGGGLLGLEAAGALKNLGVETHVIEFAPMLMAEQlDQMGGEQLRRKIESMGVRVHTSKNTLEIVqegVEARKTMRFA 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 253 PGETLEVSQVLVATAFTPNSKnLGLEAaGVKLSERGMVEINERMQTNVPGIWAIGDVT---GKLM-LAHVGSAMGIVCAE 328
Cdd:PRK14989  228 DGSELEVDFIVFSTGIRPQDK-LATQC-GLAVAPRGGIVINDSCQTSDPDIYAIGECAswnNRVFgLVAPGYKMAQVAVD 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 329 NIAGVETVALDYDMmpratycqpqvasfgyteaQAREKGYAVKVGRFPfQANGKALG------LGESAGFVK-IVMDEKY 401
Cdd:PRK14989  306 HLLGSENAFEGADL-------------------SAKLKLLGVDVGGIG-DAHGRTPGarsyvyLDESKEIYKrLIVSEDN 365
                         330
                  ....*....|
gi 1176771977 402 GEILGAHMLG 411
Cdd:PRK14989  366 KTLLGAVLVG 375
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
7-311 5.83e-10

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 60.96  E-value: 5.83e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ-WLGGVclnvgcipsksllknadvahtlrergkefgfsfdnlkLDYG-AA 84
Cdd:PRK11749  143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARdKAGGL-------------------------------------LRYGiPE 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 FKRSRQISDRLTK-----GVGFlmkKNNVAVfsGeakftsKDALLVALQDGkttelkaknF---IIATGASAA------- 149
Cdd:PRK11749  186 FRLPKDIVDREVErllklGVEI---RTNTEV--G------RDITLDELRAG---------YdavFIGTGAGLPrflgipg 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 150 -TLPGVkVDGkkiVTYVEAIMQEK----LPA--SVAIIGGG--AI---------GVEfatiwnsygvDVTIielLPRllp 211
Cdd:PRK11749  246 eNLGGV-YSA---VDFLTRVNQAVadydLPVgkRVVVIGGGntAMdaartakrlGAE----------SVTI---VYR--- 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 212 REDEEIS---KELtkEFAK-RGIK---------------VKTGVKFESIETSAAKV----KVKLPGE--TLEVSQVLVAT 266
Cdd:PRK11749  306 RGREEMPaseEEV--EHAKeEGVEfewlaapveilgdegRVTGVEFVRMELGEPDAsgrrRVPIEGSefTLPADLVIKAI 383
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1176771977 267 AFTPNSkNLGLEAAGVKLSERGMVEINER-MQTNVPGIWAIGD-VTG 311
Cdd:PRK11749  384 GQTPNP-LILSTTPGLELNRWGTIIADDEtGRTSLPGVFAGGDiVTG 429
PRK09754 PRK09754
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
105-309 2.21e-09

phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional


Pssm-ID: 170080 [Multi-domain]  Cd Length: 396  Bit Score: 59.17  E-value: 2.21e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 105 KNNVAVFSGE-AKFTSKDALLVALQDGKttELKAKNFIIATGASAATLPGVKVDGKKIVTYV---------EAIMQEKlp 174
Cdd:PRK09754   70 ENNVHLHSGVtIKTLGRDTRELVLTNGE--SWHWDQLFIATGAAARPLPLLDALGERCFTLRhagdaarlrEVLQPER-- 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 175 aSVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPR-EDEEISKELTKEFAKRGIKVKTGVKFESIEtSAAKVKVKL- 252
Cdd:PRK09754  146 -SVVIVGAGTIGLELAASATQRRCKVTVIELAATVMGRnAPPPVQRYLLQRHQQAGVRILLNNAIEHVV-DGEKVELTLq 223
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 253 PGETLEVSQVLVATAFTPNSKnLGLEAAgvkLSERGMVEINERMQTNVPGIWAIGDV 309
Cdd:PRK09754  224 SGETLQADVVIYGIGISANDQ-LAREAN---LDTANGIVIDEACRTCDPAIFAGGDV 276
HI0933_like pfam03486
HI0933-like protein;
5-257 1.34e-08

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 56.82  E-value: 1.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK------QWL---GGVClNV--GCIPSKSLLKNadvahtLRERGKEFG-- 71
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKgkklgrKILisgGGRC-NVtnLSEEPDNFLSR------YPGNPKFLKsa 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  72 FS-FDNLKL-----DYGAAFK------------RSRQISDRLTKgvgfLMKKNNVAVFSGEA--KFTSKD--ALLVALQD 129
Cdd:pfam03486  74 LSrFTPWDFiaffeSLGVPLKeedhgrlfpdsdKASDIVDALLN----ELKELGVKIRLRTRvlSVEKDDdgRFRVKTGG 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 130 GkttELKAKNFIIATGAsaatlpgvkvdgkkivtyveaimqeklpASVAIIGGGAIGVEFATiwnSYGvdVTIIELLPRL 209
Cdd:pfam03486 150 E---ELEADSLVLATGG----------------------------LSWPKTGSTGFGYPLAE---QFG--HTIIPLRPAL 193
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1176771977 210 LPREDEEiSKELTKEFAkrgikvktGVKFESIETSAAKVKVKLPGETL 257
Cdd:pfam03486 194 VPFTIDE-PFLFLKRLS--------GISLKNVVLSNGKGGITFRGELL 232
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
6-40 1.85e-07

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 53.00  E-value: 1.85e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ-WLGG 40
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRgFLGG 36
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
134-307 1.99e-07

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 52.61  E-value: 1.99e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 134 ELKAKNFIIATGA-SAATLPGVKvdGKKIVT-YVEAIMQ---EKlpasVAIIGGGAIGVEFATIWNSYGVDVTII----- 203
Cdd:pfam13738 116 TYQARYVIIATGEfDFPNKLGVP--ELPKHYsYVKDFHPyagQK----VVVIGGYNSAVDAALELVRKGARVTVLyrgse 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 204 ----------ELLPRLLPREDEEISKELtkefakrgIKVKTGVKFESIETSAAKVKVKLP-GETLEVS-QVLVATAFTPN 271
Cdd:pfam13738 190 wedrdsdpsySLSPDTLNRLEELVKNGK--------IKAHFNAEVKEITEVDVSYKVHTEdGRKVTSNdDPILATGYHPD 261
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1176771977 272 SKNlgLEAAGVKLSERGMVEINER-MQTNVPGIWAIG 307
Cdd:pfam13738 262 LSF--LKKGLFELDEDGRPVLTEEtESTNVPGLFLAG 296
GIDA pfam01134
Glucose inhibited division protein A;
6-145 2.95e-07

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 52.55  E-value: 2.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAQLKQKVAIVDKqwLGGVCLNVGCIPS-----KSLL------------KNADVAhtlrergk 68
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLITH--NTDTIAELSCNPSiggiaKGHLvreidalgglmgKAADKT-------- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  69 efGFSFDNLKLDYGAA----------FKRSRQISDRLTkgvgflmKKNNVAVFSGEAK---FTSKDALLVALQDGktTEL 135
Cdd:pfam01134  71 --GIQFRMLNTSKGPAvralraqvdrDLYSKEMTETLE-------NHPNLTLIQGEVTdliPENGKVKGVVTEDG--EEY 139
                         170
                  ....*....|
gi 1176771977 136 KAKNFIIATG 145
Cdd:pfam01134 140 KAKAVVLATG 149
gltD PRK12810
glutamate synthase subunit beta; Reviewed
222-308 3.14e-07

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 52.47  E-value: 3.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 222 TKEFAKRGIKVkTGVKFESIETSAAKVkVKLPG--ETLEVSQVLVATAFTPNSKNLgLEAAGVKLSERGMVEINER-MQT 298
Cdd:PRK12810  352 TKEFEGENGKV-TGVKVVRTELGEGDF-EPVEGseFVLPADLVLLAMGFTGPEAGL-LAQFGVELDERGRVAAPDNaYQT 428
                          90
                  ....*....|
gi 1176771977 299 NVPGIWAIGD 308
Cdd:PRK12810  429 SNPKVFAAGD 438
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
4-33 4.21e-07

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 52.10  E-value: 4.21e-07
                          10        20        30
                  ....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIV 33
Cdd:COG3075     2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIV 31
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
7-311 2.55e-06

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 49.73  E-value: 2.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGcIPSKSL---LKNADVAhTLRERGKEFGF--------SFD 75
Cdd:PRK12814  196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYG-IPRFRLpesVIDADIA-PLRAMGAEFRFntvfgrdiTLE 273
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  76 NLKLDYGAAF------KRSR-----QISDRLTKGVGFLmkkNNVAvfSGEAKFTSKDALLVAlqdGKTTELKAKNFIIAT 144
Cdd:PRK12814  274 ELQKEFDAVLlavgaqKASKmgipgEELPGVISGIDFL---RNVA--LGTALHPGKKVVVIG---GGNTAIDAARTALRL 345
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 145 GASAATlpgvkvdgkkiVTYVEAImqEKLPASVAIIGGG-AIGVEfatiwnsygvdvtiIELLPRLLPREDEEISKELTk 223
Cdd:PRK12814  346 GAESVT-----------ILYRRTR--EEMPANRAEIEEAlAEGVS--------------LRELAAPVSIERSEGGLELT- 397
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 224 efakrGIKVKTGvkfeSIETSAAKVKVKLPGE--TLEVSQVLVATAFTPNSKNlgLEAAGVKLSERGMVEIN-ERMQTNV 300
Cdd:PRK12814  398 -----AIKMQQG----EPDESGRRRPVPVEGSefTLQADTVISAIGQQVDPPI--AEAAGIGTSRNGTVKVDpETLQTSV 466
                         330
                  ....*....|..
gi 1176771977 301 PGIWAIGD-VTG 311
Cdd:PRK12814  467 AGVFAGGDcVTG 478
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
4-33 3.45e-06

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 49.08  E-value: 3.45e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIV 33
Cdd:PRK05329    2 KFDVLVIGGGLAGLTAALAAAEAGKRVALV 31
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
6-35 3.68e-06

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 48.82  E-value: 3.68e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAQLKQKVAIVDK 35
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEK 30
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
3-35 1.05e-05

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 47.52  E-value: 1.05e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK 35
Cdd:COG1053     2 HEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEK 34
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
4-35 1.28e-05

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 47.41  E-value: 1.28e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1176771977   4 NFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK 35
Cdd:COG2509    30 KYDVVIVGAGPAGLFAALELAEAGLKPLVLER 61
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
250-323 1.58e-05

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 47.43  E-value: 1.58e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 250 VKLPG--ETLEVSQVLVATAFTPNsKNLGLEAAGVKLSERGMVEINERMQTNVPGIWAIGD-VTGKlmlAHVGSAMG 323
Cdd:PRK12778  664 VAIPGstFTVDVDLVIVSVGVSPN-PLVPSSIPGLELNRKGTIVVDEEMQSSIPGIYAGGDiVRGG---ATVILAMG 736
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
1-40 1.96e-05

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 46.82  E-value: 1.96e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK---QWLGG 40
Cdd:PRK12834    1 MAMDADVIVVGAGLAGLVAAAELADAGKRVLLLDQeneANLGG 43
sdhA PRK07803
succinate dehydrogenase flavoprotein subunit; Reviewed
5-39 7.74e-05

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236101 [Multi-domain]  Cd Length: 626  Bit Score: 45.03  E-value: 7.74e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLG 39
Cdd:PRK07803    9 YDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFG 43
TIGR00275 TIGR00275
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ...
8-149 8.74e-05

flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 272992 [Multi-domain]  Cd Length: 400  Bit Score: 44.51  E-value: 8.74e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   8 VVIGAGPAGYVAAIRAAQLKQKVAIVDK--QWL-------GGVClNV--GCIPSKSLLKNADVAHTLRERGKEFGFS--- 73
Cdd:TIGR00275   1 IIIGGGAAGLMAAITAARAGLSVLLLEKnkKIGkkllisgGGRC-NLtnSCPTPEFVAYYPRNGKFLRSALSRFSNKdli 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  74 --FDNLKLDY-----GAAFKRSRQISDrLTKGVGFLMKKNNVAVFSGEA--KFTSKDALLVALQDGKttELKAKNFIIAT 144
Cdd:TIGR00275  80 dfFESLGLELkveedGRVFPCSDSAAD-VLDALLNELKELGVEILTNSKvkSIEKEDGGFGVETSGG--EYEADKVIIAT 156

                  ....*
gi 1176771977 145 GASAA 149
Cdd:TIGR00275 157 GGLSY 161
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
5-241 8.94e-05

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 44.23  E-value: 8.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKN----ADVAHTLRERGKEFGF-SFDNLKL 79
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELdlpgELIVNLVRGARFFSPNgDSVEIPI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  80 DYGAAFKRSRQISDRL------TKGVGFLMKKNNVAVfsgeakfTSKDALLVALQDGKTTELKAKNFIIATGASAATlpG 153
Cdd:TIGR02032  81 ETELAYVIDRDAFDEQlaeraqEAGAELRLGTRVLDV-------EIHDDRVVVIVRGSEGTVTAKIVIGADGSRSIV--A 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 154 VKVDGKKI--------VTYVEAIMQEKLPASVAIIGGGAIgVEFATIWN----SYGVDVTIIellprLLPREDEEISKEL 221
Cdd:TIGR02032 152 KKLGLKKEpreygvaaRAEVEMPDEEVDEDFVEVYIDRGI-VPGGYGWVfpkgDGTANVGVG-----SRSAEEGEDPKKY 225
                         250       260
                  ....*....|....*....|
gi 1176771977 222 TKEFAKRGIKVKTGVKFESI 241
Cdd:TIGR02032 226 LKDFLARRPELKDAETVEVC 245
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
2-40 9.75e-05

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 44.78  E-value: 9.75e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVD---KQWLGG 40
Cdd:COG3573     3 AMDADVIVVGAGLAGLVAAAELADAGRRVLLLDqepEANLGG 44
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
7-309 1.12e-04

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 44.21  E-value: 1.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   7 VVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGcIPSKSLLKNA--DVAHTLRERGKEFgfsFDNLKLDYGAa 84
Cdd:PRK12770   21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFG-IPEFRIPIERvrEGVKELEEAGVVF---HTRTKVCCGE- 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  85 fKRSRQISDRLTK---GVGFLMKKNnvavfsgeakftskDALLvalqdgkttelkaknfiIATGA--------SAATLPG 153
Cdd:PRK12770   96 -PLHEEEGDEFVErivSLEELVKKY--------------DAVL-----------------IATGTwksrklgiPGEDLPG 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 154 VKvdgkKIVTYVEAIM--------QEKLPAS----VAIIGGGAIGVEFA-----------------TIWNSYGVDVTI-- 202
Cdd:PRK12770  144 VY----SALEYLFRIRaaklgylpWEKVPPVegkkVVVVGAGLTAVDAAleavllgaekvylayrrTINEAPAGKYEIer 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 203 -----IELLPRLLPredeeisKELTKEFAKRGIK-VKTGVKfESIETSAAKVkVKLPGET--LEVSQVLVATAFTPNSKn 274
Cdd:PRK12770  220 liargVEFLELVTP-------VRIIGEGRVEGVElAKMRLG-EPDESGRPRP-VPIPGSEfvLEADTVVFAIGEIPTPP- 289
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1176771977 275 LGLEAAGVKLSERGMVEINERMQTNVPGIWAIGDV 309
Cdd:PRK12770  290 FAKECLGIELNRKGEIVVDEKHMTSREGVFAAGDV 324
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
3-40 1.19e-04

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 44.46  E-value: 1.19e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ-WLGG 40
Cdd:COG1233     2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNdTPGG 40
PTZ00318 PTZ00318
NADH dehydrogenase-like protein; Provisional
131-308 1.37e-04

NADH dehydrogenase-like protein; Provisional


Pssm-ID: 185553 [Multi-domain]  Cd Length: 424  Bit Score: 43.99  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 131 KTTELKAKNFIIATGASAATL--PGVKVDG-------------KKIVtyvEAIMQEKLPA----------SVAIIGGGAI 185
Cdd:PTZ00318  108 NTFSVPYDKLVVAHGARPNTFniPGVEERAfflkevnhargirKRIV---QCIERASLPTtsveerkrllHFVVVGGGPT 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 186 GVEFATIWNSY--------------GVDVTIIELLPRLLPREDEEISKELTKEFAKRGIKVKT-----GVKFESIETSAa 246
Cdd:PTZ00318  185 GVEFAAELADFfrddvrnlnpelveECKVTVLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTktavkEVLDKEVVLKD- 263
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1176771977 247 kvkvklpGETLEVSQVLVATAFTPNS--KNLgleaaGVKLSERGMVEINERMQT-NVPGIWAIGD 308
Cdd:PTZ00318  264 -------GEVIPTGLVVWSTGVGPGPltKQL-----KVDKTSRGRISVDDHLRVkPIPNVFALGD 316
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
8-35 1.93e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 43.50  E-value: 1.93e-04
                          10        20
                  ....*....|....*....|....*...
gi 1176771977   8 VVIGAGPAGYVAAIRAAQLKQKVAIVDK 35
Cdd:COG2081     1 IVIGAGAAGLMAAITAAERGARVLLLEK 28
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-41 2.68e-04

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 43.31  E-value: 2.68e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK-QWLGGV 41
Cdd:COG2072     3 ATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKaDDVGGT 44
PRK10262 PRK10262
thioredoxin reductase; Provisional
2-321 2.71e-04

thioredoxin reductase; Provisional


Pssm-ID: 182343 [Multi-domain]  Cd Length: 321  Bit Score: 42.74  E-value: 2.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGGVCLNVGCIPSKSLLKNADVAHTLRERGKEFGFSFDnlkldy 81
Cdd:PRK10262    4 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFE------ 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977  82 gaafkrSRQISDRLTKgvgfLMKKNNVAVFSGEAKFTSKDALLVAL-QDGKTTELKAKNFIIATGASA-ATLPGVKVDGK 159
Cdd:PRK10262   78 ------TEIIFDHINK----VDLQNRPFRLTGDSGEYTCDALIIATgASARYLGLPSEEAFKGRGVSAcATCDGFFYRNQ 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 160 KivtyveaimqeklpasVAIIGGGAIGVEFATIWNSYGVDVTIIEllPRLLPREDEEISKELTKEFAKRGIKVKTGVKFE 239
Cdd:PRK10262  148 K----------------VAVIGGGNTAVEEALYLSNIASEVHLIH--RRDGFRAEKILIKRLMDKVENGNIILHTNRTLE 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977 240 SI---ETSAAKVKVKLPG-----ETLEVSQVLVATAFTPNSK----NLGLEAAGVKLsERGMVeiNERMQTNVPGIWAIG 307
Cdd:PRK10262  210 EVtgdQMGVTGVRLRDTQnsdniESLDVAGLFVAIGHSPNTAifegQLELENGYIKV-QSGIH--GNATQTSIPGVFAAG 286
                         330
                  ....*....|....
gi 1176771977 308 DVTGKLMLAHVGSA 321
Cdd:PRK10262  287 DVMDHIYRQAITSA 300
glycerol3P_GlpB TIGR03378
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ...
5-33 3.15e-04

glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]


Pssm-ID: 213807  Cd Length: 419  Bit Score: 43.08  E-value: 3.15e-04
                          10        20
                  ....*....|....*....|....*....
gi 1176771977   5 FDVVVIGAGPAGYVAAIRAAQLKQKVAIV 33
Cdd:TIGR03378   1 FDVIIIGGGLAGLSCALRLAEAGKKCAII 29
PRK12843 PRK12843
FAD-dependent oxidoreductase;
3-40 5.77e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 42.42  E-value: 5.77e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK-QWLGG 40
Cdd:PRK12843   15 AEFDVIVIGAGAAGMSAALFAAIAGLKVLLVERtEYVGG 53
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
1-62 6.65e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.94  E-value: 6.65e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDK-QWLGGVCLNVGC---IPSKSLLKNADVAHT 62
Cdd:PRK07843    4 TVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKaPHYGGSTARSGGgvwIPNNEVLKRAGVPDT 69
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
9-42 1.04e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 37.51  E-value: 1.04e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1176771977   9 VIGAGPAGYVAAIRAAQLKQKVAIVDKQW-LGGVC 42
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDrLGGNA 35
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
169-212 1.11e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 41.43  E-value: 1.11e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1176771977 169 MQEKLP----ASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRL--LPR 212
Cdd:PRK06183    1 MAAQHPdahdTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLydLPR 50
PRK06129 PRK06129
3-hydroxyacyl-CoA dehydrogenase; Validated
174-250 1.96e-03

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 235706 [Multi-domain]  Cd Length: 308  Bit Score: 40.03  E-value: 1.96e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1176771977 174 PASVAIIGGGAIGVEFATIWNSYGVDVTIIELLPRLLPREDEEISKELTkEFAKRGIkvktgVKFESIETSAAKVKV 250
Cdd:PRK06129    2 MGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLE-DLAAFDL-----LDGEAPDAVLARIRV 72
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
3-89 2.01e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 40.51  E-value: 2.01e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ-WLGGVCLNVGC---IPSKSLLKNADVAHTLrERGKEFgfsFDNLK 78
Cdd:PRK12844    5 ETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQdKVGGSTAMSGGvlwLPNNPLMKAAGVPDSH-EDALAY---LDAVV 80
                          90
                  ....*....|.
gi 1176771977  79 LDYGAAFKRSR 89
Cdd:PRK12844   81 GDQGPASSPER 91
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
1-35 2.76e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 40.09  E-value: 2.76e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1176771977   1 MAENFDVVVIGAGPAGYVAAIRAAQLKqKVAIVDK 35
Cdd:COG0029     1 ERLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTK 34
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
3-36 2.98e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 39.89  E-value: 2.98e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1176771977   3 ENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ 36
Cdd:PRK07494    6 EHTDIAVIGGGPAGLAAAIALARAGASVALVAPE 39
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
6-40 6.27e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 38.93  E-value: 6.27e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAQLKQKVAIVDK-QWLGG 40
Cdd:PRK06134   14 DVLVIGSGAAGLSAAVTAAWHGLKVIVVEKdPVFGG 49
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
6-40 6.64e-03

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 38.73  E-value: 6.64e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1176771977   6 DVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQWLGG 40
Cdd:COG0665     4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGS 38
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
2-36 8.37e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 38.38  E-value: 8.37e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1176771977   2 AENFDVVVIGAGPAGYVAAIRAAQLKQKVAIVDKQ 36
Cdd:COG0654     1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERA 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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