|
Name |
Accession |
Description |
Interval |
E-value |
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
34-454 |
4.33e-84 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 268.49 E-value: 4.33e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 34 KYIKQISLLLIIYFIYIGIYINYLFNNNILGFQLINNY-----ININW--GIDGISLWLINLTLILLPISLISNWNiskn 106
Cdd:COG1008 29 RLARWVALAVSLLTLLLSLYLLAGFDPGTGGFQFVESYpwipsLGISYhlGVDGISLPLVLLTALLTPLAILASWN---- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 107 EDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPREKAAYY 186
Cdd:COG1008 105 EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-------------------ERRIYAAIK 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 187 IFIYTLFSSLFMLLSIgIYIYMINNID---YNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGS 263
Cdd:COG1008 166 FFLYTLAGSLLMLVAI-LALYFLAGALtfdIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 264 IILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNIL 343
Cdd:COG1008 245 VLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 344 GIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIF 423
Cdd:COG1008 325 GLQGAVLQMVSHGLITAALFLLV-GVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAF 403
|
410 420 430
....*....|....*....|....*....|.
gi 22654265 424 IYNSLFAILSTFSLFITTIYQMKLTTKLLYG 454
Cdd:COG1008 404 QVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
33-497 |
4.72e-82 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 263.60 E-value: 4.72e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 33 NKYIKQISLLLIIYFIYIGIYINYLFNNNILGFQLINNY-------ININWGIDGISLWLINLTLILLPISLISNWNisk 105
Cdd:PRK05846 28 ARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHpwiprfgISYHLGVDGISLLLVVLTALLTPLAVLASWE--- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 106 nEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGSLPyngnnkiiikginnnnitpREKAAY 185
Cdd:PRK05846 105 -EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKN-------------------RIYAAT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 186 YIFIYTLFSSLFMLLSIgIYIYMINNID-----YNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPI 260
Cdd:PRK05846 165 KFFLYTLLGSLLMLVAI-IYLVVVYYNAtgtfdIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 261 SGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSN 340
Cdd:PRK05846 244 AGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 341 NILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLN 420
Cdd:PRK05846 324 NQLGIQGAIFQMISHGLSSAALFLLV-GVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILL 402
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22654265 421 GIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYG-YKSIYINIwsiwgNDVNKRELLLLNILFFFIILFGIYPNLIIK 497
Cdd:PRK05846 403 GSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGpVKNEVAKL-----KDLNGRELLILLPLVALLLLLGVYPKPLLD 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
72-497 |
2.41e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 242.92 E-value: 2.41e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 72 ININWGIDGISLWLINLTLILLPISLISNWNisknEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFI 151
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 152 LIGKLGSlpyngnnkiiikginnnniTPREKAAYYIFIYTLFSSLFMLLS-IGIYIYMINNIDYNNIYNIILSIDLQSII 230
Cdd:TIGR01972 145 LIGVWGG-------------------PNRIYAAMKFFLYTLAGSLLMLLAiLGLYFLGGGTFDLLELLNLPLPFGVQTWL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 231 FIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGL 310
Cdd:TIGR01972 206 FLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGAL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 311 ITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMP 390
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLV-GVLYERAHTRDIAKYGGLANKMP 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 391 IFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSiyiNIWSIWGNDV 470
Cdd:TIGR01972 365 VLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELS---NPEVAEFPDL 441
|
410 420
....*....|....*....|....*..
gi 22654265 471 NKRELLLLNILFFFIILFGIYPNLIIK 497
Cdd:TIGR01972 442 NGREIAVLAPLVVLILFLGLYPNPLLD 468
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
74-496 |
1.91e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 224.93 E-value: 1.91e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 74 INWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIiilnFICLDLITFYILFEATLLPLFILI 153
Cdd:MTH00217 74 VVFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGV----FTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 154 GKLGSlpyngnnkiiikginnnnitpRE---KAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSII 230
Cdd:MTH00217 150 GIWGS---------------------REekvQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFI 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 231 FIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGL 310
Cdd:MTH00217 209 FLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 311 ITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMP 390
Cdd:MTH00217 289 TTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAV-TFLYERHHTRLIKYYRGMVITMP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 391 IFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYIniwsIWGNDV 470
Cdd:MTH00217 368 LFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYL----YFSRDL 443
|
410 420
....*....|....*....|....*.
gi 22654265 471 NKRELLLLNILFFFIILFGIYPNLII 496
Cdd:MTH00217 444 NRREFYVLLPLVFLIYLMGIFPFIII 469
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
67-496 |
3.70e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 221.48 E-value: 3.70e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 67 LINNYININWG-----IDGISLWLINLTLILLPISLISNWNISKNEDKSkvltYVLLILIIGIIIILNFICLDLITFYIL 141
Cdd:MTH00204 65 IISPTLNFQWGplvfaVDGVSLFFILLTTLLIPICILISWKSIKFLFKE----FLLCLLFLEVLLIGVFSVLDLLLFYIL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 142 FEATLLPLFILIGKLGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNII 221
Cdd:MTH00204 141 FEGILIPMFLLIGIWGS------------------REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 222 LSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIG 301
Cdd:MTH00204 203 LPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 302 ILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGgILYDRYHSRLIYY 381
Cdd:MTH00204 283 VIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVT-FLYERHHTRLIKY 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 382 YQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYIn 461
Cdd:MTH00204 362 YRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYL- 440
|
410 420 430
....*....|....*....|....*....|....*
gi 22654265 462 iwsIWGNDVNKRELLLLNILFFFIILFGIYPNLII 496
Cdd:MTH00204 441 ---LFSRDLNRRELLAILPLIIAIFLLGIVPFIII 472
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
57-464 |
1.12e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 186.58 E-value: 1.12e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 57 LFNNNILGFQLINNYininWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVltYVLLILIIGIIIILNFICLDLI 136
Cdd:MTH00150 5 LLYSSFSSYESLSEL----FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 137 TFYILFEATLLPLFILIGKLGSLPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNN 216
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQP------------------ERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLL 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 217 IYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILI---NLSDVIIIy 293
Cdd:MTH00150 141 ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVfslSSSSFSIF- 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 294 nplIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDR 373
Cdd:MTH00150 220 ---LISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLA-NYTYEK 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 374 YHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLY 453
Cdd:MTH00150 296 VHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQH 375
|
410
....*....|.
gi 22654265 454 GYKSIYINIWS 464
Cdd:MTH00150 376 GGSSSFLKPFN 386
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
70-460 |
6.15e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 185.53 E-value: 6.15e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 70 NYININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPL 149
Cdd:MTH00206 49 SFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPT 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 150 FILIGKLGSLPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSI 229
Cdd:MTH00206 129 LLLITRWGNQK------------------ERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNL 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 230 IFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYtIGILTIFYIG 309
Cdd:MTH00206 191 WWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFII-LGLWGSIMTS 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 310 LITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRYHSRLIYYYQSLATYM 389
Cdd:MTH00206 270 SICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL-ANLLYERSHTRTILGNRGLQMIL 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22654265 390 PIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYI 460
Cdd:MTH00206 349 PLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHL 419
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
76-497 |
1.42e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 185.90 E-value: 1.42e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 76 WGIDGISLWLINLTLILLPISLISNWNISKNEDKSkvltYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGK 155
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 156 LGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFMLLSI-GIY-IYMINNIDYNNIYNIILSIDLQSIIFIG 233
Cdd:MTH00226 174 WGS------------------REEKMQAAYYFFFYTLIGSVLMLLCLfSLYnIHGTTDYLTLASCSHVVSEQTQKWIFLG 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 234 LIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITL 313
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATC 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 314 KQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMPIFS 393
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 394 IYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYINiwsiWGNDVNKR 473
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLIT----FARDVNRR 470
|
410 420
....*....|....*....|....
gi 22654265 474 ELLLLNILFFFIILFGIYPNLIIK 497
Cdd:MTH00226 471 EFYITASMVFFAFLIGIYPIFILE 494
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
57-445 |
3.63e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 183.05 E-value: 3.63e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 57 LFNNNILGFQLINNyININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVltYVLLILIIGIIIILNFICLDLI 136
Cdd:MTH00163 34 LFMLLFSLSFYFSN-ISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 137 TFYILFEATLLPLFILIGKLGSLPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIgiyIYMINNIDYNN 216
Cdd:MTH00163 111 LFYIFFESSLIPTLFLILGWGYQP------------------ERLQAGIYLLFYTLFASLPLLVGI---FYLYNNSGSLS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 217 IYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILInLSDVIIIYNPL 296
Cdd:MTH00163 170 FFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSF-FSKLGLKFNYI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 297 IYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHS 376
Cdd:MTH00163 249 WISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLA-NIIYERLGS 327
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22654265 377 RLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQM 445
Cdd:MTH00163 328 RSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSL 396
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-432 |
5.30e-47 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 165.18 E-value: 5.30e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 134 DLITFYILFEATLLPLFILIGKLGSLPYngnnkiiikginnnnitpREKAAYYIFIYTLFSSLFMLLSI-GIYIYM--IN 210
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSPR------------------SSEAGMKYFLLTLLGSSILLFGIsLMYNYTgtLS 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 211 NIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILInLSDVI 290
Cdd:pfam00361 65 FDELSKALTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLL-YLPSS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 291 IIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGIL 370
Cdd:pfam00361 144 PFIQQILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVI 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22654265 371 YDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAIL 432
Cdd:pfam00361 224 YRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
70-463 |
1.69e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 157.06 E-value: 1.69e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 70 NYININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIIlnFICLDLITFYILFEATLLPL 149
Cdd:MTH00205 47 SFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILS--FSVDNLLLFYITFEASLIPT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 150 FILIGKLGSLPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSI 229
Cdd:MTH00205 125 LILILGWGYQP------------------ERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 230 IFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILInLSDVIIIYNPLIYTIGILTIFYIG 309
Cdd:MTH00205 187 YWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSM-LYKLNSNFSELFFSISLWGGVMTG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 310 LITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRYHSRLIYYYQSLATYM 389
Cdd:MTH00205 266 MICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFAL-ANVNYERTNSRSMLMNKGVLNTF 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22654265 390 PIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYINIW 463
Cdd:MTH00205 345 PFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
62-443 |
2.90e-42 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 156.67 E-value: 2.90e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 62 ILGFQLINNYININW-------GIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLD 134
Cdd:MTH00044 36 LLSLFLLNNHWSSSWhnlslslATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 135 LITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFMLLS-IGIYIYM--INN 211
Cdd:MTH00044 116 LILFYIAFETTLIPTLILITRWGA------------------QKERIQAGLYFLFYTLFGSLPLLISlIAIYSSSssLSI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 212 IDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILI-NLSDVI 290
Cdd:MTH00044 178 PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLfSLPSAN 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 291 IIYNPLIyTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGIL 370
Cdd:MTH00044 258 NISFILI-VFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCL-ANIL 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22654265 371 YDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIY 443
Cdd:MTH00044 336 YERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIY 408
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
57-443 |
2.93e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 151.22 E-value: 2.93e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 57 LFNNNILGFQLINNYIninwGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLI 136
Cdd:MTH00068 41 WFNLPSETMNFTNKYF----GIDQISSPLLILTCWLLPLMILASQNHLKNEPINRQRTYISMLIILQLTLILAFSATELI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 137 TFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFMLLSIgIYIYMINNIDYNN 216
Cdd:MTH00068 117 LFYIFFEATLIPTLIIITRWGN------------------QEERLNAGTYFLFYTLAGSLPLLIAL-LILQNSLGSLSLI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 217 IYNIILSIDLQSIIFIGL----IIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRlILINLSDVIIi 292
Cdd:MTH00068 178 LLELMSPMQLMTYTNKIWwlacLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILR-ISILLTPLSK- 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 293 ynPLIYTIGILTIFYI---GLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGI 369
Cdd:MTH00068 256 --ELSYPFIILALWGVlmtSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCL-ANT 332
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22654265 370 LYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIY 443
Cdd:MTH00068 333 NYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAY 406
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
69-449 |
7.32e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 149.96 E-value: 7.32e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 69 NNYININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLP 148
Cdd:MTH00124 49 TKNLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 149 LFILIGKLGSLPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIgIYIYMINNIDYNNIYNIILSIDLQS 228
Cdd:MTH00124 129 TLILITRWGNQP------------------ERLSAGTYFLFYTLISSLPLLIAI-LYLHNQTGTLSLPMLQLTHPTLTNS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 229 IIFIGLIIGIL----VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIyTIGILT 304
Cdd:MTH00124 190 WTNLLLWLACLmafmVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFL-TLALWG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 305 IFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRYHSRLIYYYQS 384
Cdd:MTH00124 269 ALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCL-ANTNYERTHSRTLLLTRG 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22654265 385 LATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIY--QMKLTT 449
Cdd:MTH00124 348 LQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYtlYMFLST 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-461 |
3.36e-37 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 142.57 E-value: 3.36e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 79 DGISLWLINLTLILLPISLISNWNISKNEDKSKvlTYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGS 158
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 159 LPyngnnkiiikginnnnitPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGI 238
Cdd:MTH00014 136 QP------------------ERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITILAF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 239 LVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIyTIGILTIFYIGLITLKQIDI 318
Cdd:MTH00014 198 MVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFS-SISLVGAVITSLICIRQPDL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 319 KVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRYHSRLIYYYQSLATYMPIFSIYLLI 398
Cdd:MTH00014 277 KSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL-ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFL 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22654265 399 AGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYIN 461
Cdd:MTH00014 356 LSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMN 418
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-496 |
1.77e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 141.32 E-value: 1.77e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 58 FNNNILGFQLINNY-----ININW--GIDGISLWLINLTLILLPISLISNWNISKnedKSKVltYVLLILIIGIIIILNF 130
Cdd:PRK12561 30 YDPSSSSLQLVERYawlpqIGLEWslGVDGLSMPLVLLSGLITTLSIFASWKVTR---KPRL--FYFLMLVLYSAQIGVF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 131 ICLDLITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPREKAAYYIFIYTLFSSLFMLLS-IGIYIY-- 207
Cdd:PRK12561 105 LAQDLLLFFLMWELELVPVYLLISIWGG-------------------QKRLYAATKFILYTALASIFILVAgLALALSgd 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 208 -MINNIDYNNIYNIILSIDLqsIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINL 286
Cdd:PRK12561 166 tFTFDLAELGAKSYPLALEL--LLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQML 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 287 SDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLV 366
Cdd:PRK12561 244 PDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLT 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 367 gGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGE---FLSLNGIFIYNSLF----AILSTFSLFI 439
Cdd:PRK12561 324 -GVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSEltvFLGITSSDVYSSTFrtitILLAAVGLIL 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 22654265 440 TTIYQMKLTTKLLYGYKSIYINIWSIWGnDVNKRELLLLNILFFFIILFGIYPNLII 496
Cdd:PRK12561 403 TPIYLLSMLRRVFYGPRSELLPALAVVE-DAKPRELFIALSLLVPIIGIGFYPKLAT 458
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
134-447 |
1.61e-32 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 128.73 E-value: 1.61e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 134 DLITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPREKAAYYIFIYTLFSSLFMLLSIGIyIYMIN--- 210
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGT-------------------KEALRAGLKYLILNLVGSALFLLGVGL-LYGATgtl 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 211 NIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLI-LINLSDV 289
Cdd:COG0651 188 NMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLtLLFGADP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 290 IIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGI 369
Cdd:COG0651 268 ALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAI 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22654265 370 LYdRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNS-LFAILSTFSLFITTIYQMKL 447
Cdd:COG0651 348 ER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
70-447 |
1.75e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 126.61 E-value: 1.75e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 70 NYININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPL 149
Cdd:MTH00127 51 SSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 150 FILIGKLGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFML---LSIGIYIYMINNIDYNNIYNIILSIDL 226
Cdd:MTH00127 131 LIIITRWGN------------------QTERLNAGTYFLFYTLAGSLPLLvalLLLQNSTGTLSMLTLQYSQPLQLSSWA 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 227 QSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIyTIGILTIF 306
Cdd:MTH00127 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFI-ILALWGII 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 307 YIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRYHSRLIYYYQSLA 386
Cdd:MTH00127 272 MTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCL-ANTNYERTHSRTMLLARGLQ 350
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22654265 387 TYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKL 447
Cdd:MTH00127 351 MILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYM 411
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
66-445 |
6.96e-30 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 121.92 E-value: 6.96e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 66 QLINNYININ--WGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFE 143
Cdd:MTH00110 44 QPNDNSLNFSllFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 144 ATLLPLFILIGKLGSlpyngnnkiiikginnnnITPREKAAYYIFIYTLFSSLFMLLSIgIYIYMINNIDYNNIYNIILS 223
Cdd:MTH00110 124 ATLIPTLIIITRWGN------------------QTERLNAGLYFLFYTLVGSLPLLVAL-LYIQNNLGSLNFLLLQLWAQ 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 224 IDLQSIIFIGL----IIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLilinlsdvIIIYNPLI-- 297
Cdd:MTH00110 185 PLPNSWSNNLLwlacMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI--------TIILNPLTef 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 298 --YTIGILTIF---YIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGIlYD 372
Cdd:MTH00110 257 maYPFLMLSLWgmiMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSN-YE 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22654265 373 RYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQM 445
Cdd:MTH00110 336 RIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSL 408
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
64-454 |
5.00e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 108.26 E-value: 5.00e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 64 GFQLINNY-----ININW--GIDGISLWLINLTLILLPISLISNWNISKnedKSKVLTYVLLILIIGIIIIlnFICLDLI 136
Cdd:PRK02546 64 GLQLVESYswlpqLGLTWsvGADGLSMPLILLTGFITTLAVLAAWPVTF---KPKLFYFLMLAMYGGQIAV--FAVQDML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 137 TFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPREKAAYYIFIYTLFSSLFMLLS-IGIYIYM-INNIDY 214
Cdd:PRK02546 139 LFFLAWELELIPVYLLLAIWGG-------------------KKRQYAATKFILYTAGSSLFILLAaLAMAFYGdTPTFDM 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 215 NNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYN 294
Cdd:PRK02546 200 TALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 295 PLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGIlYDRY 374
Cdd:PRK02546 280 PLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGAT-YDRT 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 375 HSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIF---IYNSLF----AILSTFSLFITTIYQMKL 447
Cdd:PRK02546 359 HTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFAtsdAYTLPFrvvvVFLAAVGVILTPIYLLSM 438
|
....*..
gi 22654265 448 TTKLLYG 454
Cdd:PRK02546 439 LREIFFG 445
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
29-454 |
1.07e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 107.09 E-value: 1.07e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 29 INIKNKYIKQISLLLIIYFIYIGIYINYLFNNNILGFQLINNY-------ININWGIDGISLWLINLTLILLPISLISNw 101
Cdd:PRK06473 21 SGINGKLARSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIpwidslgLSYHLGVDGLSLPLLVLNSLLTLIAIYSS- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 102 niSKNEDKSKVltYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPRE 181
Cdd:PRK06473 100 --DESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG-------------------QRRG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 182 KAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDL--QSIIFIGLIIGILVKTPVFPVHTWLPLVHAESP 259
Cdd:PRK06473 157 YAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLstQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEAS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 260 ISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFS 339
Cdd:PRK06473 237 TPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 340 NNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATY---MPIFSIYLLIAGLFNMGIPLSLNFIGEF 416
Cdd:PRK06473 317 ATPLSILAAVFQMISHGLISALLFLLV-GVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
410 420 430
....*....|....*....|....*....|....*...
gi 22654265 417 LSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYG 454
Cdd:PRK06473 396 LVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
70-456 |
5.85e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 105.03 E-value: 5.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 70 NYININW--GIDGISLWLINLTLILLPISLISNWNISKNedkSKVLTYVLLILIIGIIIIlnFICLDLITFYILFEATLL 147
Cdd:CHL00011 72 NFFDFHWrlGIDGLSIGPILLTGFITTLATLAAWPVTRN---SRLFYFLMLAMYSGQIGL--FSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 148 PLFILIGKLGSlpyngnnkiiikginnnniTPREKAAYYIFIYTLFSSLFML---LSIGIYIYMINNIDYNNIYNIILSI 224
Cdd:CHL00011 147 PVYLLLSMWGG-------------------KKRLYSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFETLANQSYPV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 225 DLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILT 304
Cdd:CHL00011 208 ALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQ 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 305 IFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLvGGILYDRyhSRLIYYYQ- 383
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFL-AGTSYDR--IRLVYLDEm 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 384 -SLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFI---YNSLFAILSTFSLFI----TTIYQMKLTTKLLYGY 455
Cdd:CHL00011 365 gGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITsqkYLLMPKILITFVMAIgmilTPIYLLSMLRQMFYGY 444
|
.
gi 22654265 456 K 456
Cdd:CHL00011 445 K 445
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
130-465 |
2.21e-22 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 99.21 E-value: 2.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 130 FICLDLITFYILFEATLLPLFILIGKLGSLPYngnnkiiikginnnnitpREKAAYYIFIYTLFSSLFMLLSIGIYIYMI 209
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIE------------------KINSSYYLLFYAAFFSFPFLFVYLKNFFFF 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 210 NNIDYNNIYNIILSIDLqsiifiglIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLsdv 289
Cdd:MTH00094 141 SLCYFDFFLSWEMFFIL--------SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLN--- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 290 iIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGgI 369
Cdd:MTH00094 210 -FVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIG-E 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 370 LYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTT 449
Cdd:MTH00094 288 FYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
330
....*....|....*.
gi 22654265 450 KLLYGYKSIYINIWSI 465
Cdd:MTH00094 368 SSFMGKKFSNFNNFNV 383
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
30-454 |
4.65e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 92.85 E-value: 4.65e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 30 NIKNKYIKQISLLLIIYFIYIGIYINYLFNNNILGFQLINNY-------ININWGIDGISLWLINLTLILLPISLISnwn 102
Cdd:PRK07363 22 NLPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLpwneplgLSYSLGVDGLSLPLLVLNSLLTWIAIYS--- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 103 ISKNEDKSKVltYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGSlpyngnnkiiikginnnniTPREK 182
Cdd:PRK07363 99 IGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG-------------------EKRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 183 AAYYIFIYTLFSSLFMLLS-IGI-YIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPI 260
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAfLGIvWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 261 SGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSN 340
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 341 NILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATY---MPIFSIYLLIAGLFNMGIPLSLNFIGEFL 417
Cdd:PRK07363 318 TQLSLLGAVAQMISHGLILALLFHLV-GIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
410 420 430
....*....|....*....|....*....|....*..
gi 22654265 418 SLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYG 454
Cdd:PRK07363 397 VFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFG 433
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-423 |
1.75e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 91.09 E-value: 1.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLIL----INLSDVIIIYNPLIYtIGILTIFYIGLITLKQ 315
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAV-LALLSMLVGSLAALGQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 316 IDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGIlYDRYHSRLIYYYQSLATYMPIFSIY 395
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAI-EVTYGTRRLSELSGLGRRMPLTAAA 371
|
170 180
....*....|....*....|....*...
gi 22654265 396 LLIAGLFNMGIPLSLNFIGEFLSLNGIF 423
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
241-423 |
7.92e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.22 E-value: 7.92e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRL-ILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDrYHSRLIYYYQSLATYMPIFSIYLLIA 399
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180
....*....|....*....|....
gi 22654265 400 GLFNMGIPLSLNFIGEFLSLNGIF 423
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGL 409
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-447 |
1.56e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 88.49 E-value: 1.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRL------ILINLSDVIIIYNPLIYTIGILTIFYIGLITL 313
Cdd:PRK12667 235 IKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMV 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 314 KQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILyDRYHSRLIYYYQSLATYMPIFS 393
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFI-HAAGTRDIDELAGLGRKMPIAS 393
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 22654265 394 IYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYN-SLFAILSTFSLFITTIYQMKL 447
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSKLLLFNALLESGfYLPALVLLIASAISLVGYFRA 448
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
181-437 |
2.34e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.54 E-value: 2.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 181 EKAAYYIFIYTLFSSLFMLLSIgiyIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPI 260
Cdd:PRK08667 161 QRAGIFYFVMTQLSTVFLMLGI---IVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 261 SGSIILAGIIIKLAIYAIIRlILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSN 340
Cdd:PRK08667 238 NVSALMSGVMLKVAVYGLVR-FLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLY 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 341 NILGIEGS-----------LLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLS 409
Cdd:PRK08667 317 VIFGVYGLdtlallalggaLFHSLNHALFKSLLFLTAGSVVH-ATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPF 395
|
250 260 270
....*....|....*....|....*....|....*..
gi 22654265 410 LNFIGEFLSLNGIF---------IYNSLFAILSTFSL 437
Cdd:PRK08667 396 NGFASELLLYESFFqsfsvadplIKILLFSVLAIFAL 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-422 |
1.61e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 72.68 E-value: 1.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILInlSDVIiiyNPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD--VPGL---DLIVRIFGVGTALLGVLFALLEKDLK 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSifsnnilGIEGSLLiSIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMPifsiyLLIA 399
Cdd:PRK07234 271 RMLAFSTISQLGFILAA-------PLVGGLY-ALAHGLVKSTLFLCA-GALPSRNFTELISQMLGIGKWIP-----LTMA 336
|
170 180
....*....|....*....|...
gi 22654265 400 GLFNMGIPLSLNFIGEFLSLNGI 422
Cdd:PRK07234 337 SFSIAGFPLLAGFVSKVLTLKNL 359
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-453 |
1.92e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 69.46 E-value: 1.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 227 QSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILI-----NLSDVIIIYNPLIYtIG 301
Cdd:PRK06589 209 QSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifglsYLQRIFAEFNWLIF-IP 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 302 ILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGIlYDRYHSRLIYY 381
Cdd:PRK06589 288 IVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSI-YSLKKEDQVDK 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22654265 382 YQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLF-AILSTFSLFITTIYQMKLTTKLLY 453
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWlSIIVMLVVIASSILSALYLLKILS 439
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
241-417 |
3.30e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.60 E-value: 3.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKV 320
Cdd:COG1007 216 KLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 321 IIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAg 400
Cdd:COG1007 296 MLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF- 374
|
170
....*....|....*...
gi 22654265 401 LFNM-GIPLSLNFIGEFL 417
Cdd:COG1007 375 LLSLaGIPPTAGFFGKFY 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
241-432 |
5.87e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 5.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLI-LINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSaLLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLK 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFlLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIA 399
Cdd:PRK08676 299 KLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF-FSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILG 377
|
170 180 190
....*....|....*....|....*....|....*.
gi 22654265 400 GLFNMGIPLSLNFIGEF---LSLNGIFIYNSLFAIL 432
Cdd:PRK08676 378 SAAIIGMPPFPLFLSKFfilLQLGGISVWLVLAVLL 413
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
240-416 |
8.61e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 67.10 E-value: 8.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILInLSDVIIIYNPLIYTI--GILTIFYIGLITLKQID 317
Cdd:PRK08377 218 VEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYL-MQNANGWSSVLKLVIimATLTVFFAELSALRQKN 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 318 IKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDrYHSRLIYYYQSLATYMPIFSIYLL 397
Cdd:PRK08377 297 VKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGIT-LGGTEIEKFEGLGKRMPLTALALT 375
|
170
....*....|....*....
gi 22654265 398 IAGLFNMGIPLSLNFIGEF 416
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKF 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
240-417 |
4.22e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.40 E-value: 4.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIII----------YNPLIYTIGILTIFYIG 309
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSefgtyrgvplFNYILAWLGNISIIVGT 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 310 LITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYM 389
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEKM 366
|
170 180
....*....|....*....|....*...
gi 22654265 390 PIFSIYLLIAGLFNMGIPLSLNFIGEFL 417
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWL 394
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
244-416 |
4.68e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 64.84 E-value: 4.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 244 VFPVHTWLPLVHAESPISGSIILAGIIiKLAIYAII-RLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVII 322
Cdd:PRK05777 220 AVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 323 AYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAgLF 402
Cdd:PRK05777 299 AYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIF-ML 377
|
170
....*....|....*
gi 22654265 403 NM-GIPLSLNFIGEF 416
Cdd:PRK05777 378 SLaGIPPTAGFWGKF 392
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
241-423 |
2.27e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.98 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVH--AESPISGsiILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDI 318
Cdd:PRK06521 223 KAGLVPLHVWLPRAHpaAPSHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 319 KVIIAYSSIIHMAIAIMS-----IFSNN------ILGIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLAT 387
Cdd:PRK06521 301 KRLLAYSTIENIGIIFVGlglamVFIAYgmpllaALALTAALYHLLNHALFKSLLFLGAGAVLH-ATGTRDMEKLGGLIR 379
|
170 180 190
....*....|....*....|....*....|....*..
gi 22654265 388 YMPIFSIYLLIAGLFNMGIPlSLN-FIGEFLSLNGIF 423
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALP-PLNgFVSEWLLLQSLL 415
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-432 |
3.20e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.98 E-value: 3.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLIL----INLSDVIIIYNPLIYTIGILTIFYIGLITLKQ 315
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 316 IDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYMPIFSIY 395
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISY-HFGTTKLEDCLNLWKSMPKITLA 379
|
170 180 190
....*....|....*....|....*....|....*..
gi 22654265 396 LLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAIL 432
Cdd:PRK12662 380 FVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLV 416
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
245-447 |
3.53e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.01 E-value: 3.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 245 FPVHTWLPlvHA-ESPISGSIIL-AGIIIKLAIYAIIRL-ILINLSDViiiYNPLIYTIGILTIFYIGLITLKQIDIKVI 321
Cdd:COG1009 228 FPLHFWLP--DAmEGPTPVSALLhAATMVKAGVYLLARLsPLFALSPV---WLTVVAIIGAITALFAALIALAQTDIKRV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 322 IAYSSIIHMAIAIMSIFSNnilGIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYMPIFSIYLLIAGL 401
Cdd:COG1009 303 LAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIH-ATGTRDIRKMGGLRKKMPITAITFLIGAL 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 22654265 402 FNMGIPLSLNFIGEFLSLNGIF---IYNSLFAILSTFSLFITTIYQMKL 447
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRL 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
244-440 |
5.73e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 58.69 E-value: 5.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 244 VFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINlSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIA 323
Cdd:PRK08042 196 IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLG-GNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 324 YSSIIHMAIAIMSIFSNNI-----------LGIEGSLLISIAHGFASPALFLLVGGILYDRYHsRLIYYYQSLATYMPIF 392
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTgialeqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVI 353
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 22654265 393 SIYLLIaGLFNMGIPLSLN-FIGEFLslngifIYNSLFAiLSTFSLFIT 440
Cdd:PRK08042 354 SIAMLV-GLMAMAALPPLNgFAGEWV------IYQSFFK-LSNSGAFVA 394
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
240-440 |
2.01e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.50 E-value: 2.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHtWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK12663 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIR 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYMPIFSIYLLIA 399
Cdd:PRK12663 298 RIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLIL 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 22654265 400 GLFNMGIPLSLNFIGEFLSLNG-----------IFIYNSLFAILSTFSLFIT 440
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGaldngayillaLMLITSLITMYSLFRIFFL 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
241-459 |
2.83e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 56.11 E-value: 2.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKV 320
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 321 IIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYmPIFSIYLLIAG 400
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRY-PVLGWMFFIAA 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 401 LFNMGIPLSLNFIGEFLSLNGIFIY-NSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIY 459
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGY 440
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
183-365 |
3.67e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 55.70 E-value: 3.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 183 AAYYIFIYTLFSSLFMLLSIgiyIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISG 262
Cdd:MTH00062 123 ASWYFLGYLLLTSLPLLLCL---LYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPV 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 263 SIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYigliTLKQIDIKVIIAYSSIIHMAIAIMSIFSNNI 342
Cdd:MTH00062 200 SIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLIT----ACSELDGKRWLAFLSLSHILVPVLGLFVGDW 275
|
170 180
....*....|....*....|...
gi 22654265 343 LGIEGSLLISIAHGFASPALFLL 365
Cdd:MTH00062 276 SSINLSFFYCLGHGLSAGLVFLL 298
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
245-414 |
9.45e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 9.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 245 FPVHTWLP-LVHAESPISGSIILAgIIIKLAIYAIIRLilinlSDVI---IIYNPLIYTIGILTIFYIGLITLKQIDIKV 320
Cdd:PRK12647 212 FPFHFWLPnAMEAPTPVSAYLHSA-TMVKAGIYLLARL-----NPVLggtPLWQTILPLFGGLTMLTGALLAVRQTDLKL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 321 IIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFlLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAG 400
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALF-MVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAA 364
|
170
....*....|....
gi 22654265 401 LFNMGIPLSLNFIG 414
Cdd:PRK12647 365 LSMAGLPPLFGFLA 378
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
241-413 |
1.19e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 54.66 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLP-LVHAESPISgSIILAGIIIKLAIYAIIRLILInLSDVIIiYNPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK12650 221 KSAQFPFHFWLPeAMAAITPVS-AFLHAAAVVKAGIYLLLRFSPV-FHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQSLATYMPIFSIYLLIA 399
Cdd:PRK12650 298 KLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI-GVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIA 376
|
170
....*....|....
gi 22654265 400 GLFNMGIPLSLNFI 413
Cdd:PRK12650 377 ALSMAAVPPLFGFV 390
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-414 |
2.51e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.05 E-value: 2.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIR---LILIN--LSDVIIIYNPLIYTIGILTifyigliTLK 314
Cdd:PRK12665 221 IKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRthtLLFPGggLDTLLMVVALLTMVVGILG-------AIA 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 315 QIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGgiLYDRYH-----SRLiyyyQSLATYM 389
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG--LIERQAgssslRRL----GGLAKAS 367
|
170 180
....*....|....*....|....*
gi 22654265 390 PIFSIYLLIAGLFNMGIPLSLNFIG 414
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIG 392
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
241-448 |
2.32e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 50.36 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHA-ESPISgSIILAGIIIKLAIYAIIRLILINLSDVIIIYnpLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:TIGR01974 226 KSAQLPLHTWLPDAMEgPTPVS-ALIHAATMVTAGVYLVARTSPLFELSPTALY--LVTIIGAITALFAATVALVQNDIK 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSS---IIHMAIAimsifsnniLGIEG---SLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFS 393
Cdd:TIGR01974 303 RILAYSTmsqLGYMFLA---------LGVGAyaaAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTY 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 22654265 394 IYLLIAGLFNMGIPLSLNFIGEFLSLNGIFI--YNSLFAILSTFSLFITTIYQMKLT 448
Cdd:TIGR01974 374 ITFLIGSLALIGFPGFAGFFSKDLILEAAFAsgTHSFLFVAGLIGAFLTAFYSFRLI 430
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
241-460 |
1.74e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.95 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAgIIIKLAIYAIIRLILINLSDVIIIynpliytiGILTIFYIGLITLKQIDIKV 320
Cdd:MTH00196 108 KLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSILVSIGLNVNILLIG--------GLFSLFVGAIGALNQTKIKR 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 321 IIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVggILYDRYHSrLIYYYQSLATYMPIFSIYLLIAG 400
Cdd:MTH00196 179 LLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSII--LALNVYKN-LIIEFSGLSRRLPILAITLALTF 255
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22654265 401 LFNMGIPLSLNFIGEFLSLNGIFIYNS-LFAILSTFSLFITTIYQMKLTTKLLYGYKSIYI 460
Cdd:MTH00196 256 LSIAGIPPLVGFLGKWLILLSGVVYQYyLIFLLAVFCSVIAGVYYVRIVKILFFQANSFLL 316
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
241-457 |
2.09e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 2.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILagIIIKLA-IYAIIRLIL------INLSDV---IIIYnpliytiGILTIFYIGL 310
Cdd:PRK08376 233 KSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAgLYALARVLFsiygpaINLATVgwvIIIL-------GCLTMFVGVA 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 311 ITLKQIDIKVIIAYSSI---------IHMAIAIMSIFSNNILG---IEGSLLISIAHGFASPALFLLVGGILYdRYHSRL 378
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVsqigymllgLGVGLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIY-ETGTRN 382
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22654265 379 IYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKS 457
Cdd:PRK08376 383 LNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPS 461
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
248-447 |
3.22e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 248 HTWLP-LVHAESPISgSIILAGIIIKLAIYAIIRLI-LINLSDVIIIynpLIYTIGILTIFYIGLITLKQIDIKVIIAYS 325
Cdd:MTH00020 230 HTWLPdAMEGPTPVS-ALIHAATMVTAGVFLLIRSSpLFEQAPLALI---IVTIVGSLTVFFAATVGLVQNDLKKVIAYS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 326 SIIHMAIAIMSIfsnNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMG 405
Cdd:MTH00020 306 TCSQLGYMVVAC---GLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMG 382
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 22654265 406 IPLSLNFIGEFLSLNgiFIYNSLFAI----LSTFSLFITTIYQMKL 447
Cdd:MTH00020 383 FPYLTGFYSKDLILE--LAFGQYYLIfaywLGCFSALLTAFYSIRL 426
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
240-378 |
2.45e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 43.53 E-value: 2.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVhAESPISGSIILAGIIIKLAIYAIIRLI-LINLSDVIIIynpLIYTIGILTIFYIGLITLKQIDI 318
Cdd:PRK08168 212 LKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFApLLEQAPPARW---LLVLVGLATAVLAGLVMLTRISI 287
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22654265 319 KVIIAYSSIIHMAIAIMSIfsnnILGI-EGSLLISIAHGFASPALFLLVGGILYDRYHSRL 378
Cdd:PRK08168 288 KVRLAWSTVAQMGFMLLEC----GLGLyELALLHLVAHSLYKAHAFLSASEAVRDTRLRRL 344
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
241-414 |
8.78e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.22 E-value: 8.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLP-LVHAESPISGsIILAGIIIKLAIYAIIRLIlINLSDVIIIYnPLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK12644 216 KSAIVPFHFWLPgAMAAPTPVSA-YLHAAAMVKAGIYLVARLA-PGFADVPVWR-PTVLVLGLATMLLGGWRALRQHDLK 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMsifsnnILGIEGS------LLISIAHGFASPALFLLVGGIlyDryHS---RLIYYYQSLATYMP 390
Cdd:PRK12644 293 LILAYGTVSQLGFLTV------LVGIGTRdaalagLAMLLAHALFKAALFLVVGII--D--HStgtRDIRKLSGLGRRQP 362
|
170 180
....*....|....*....|....
gi 22654265 391 IFSIYLLIAGLFNMGIPLSLNFIG 414
Cdd:PRK12644 363 VLAVVAALAAASMAGLPPLLGFVA 386
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
240-413 |
1.27e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.42 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLsdviiiynPLIYTIGILTIFYIgLITLKQIDIK 319
Cdd:PRK12668 195 VNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE--------LLIYIGAAMAVYGV-FFALLENDLR 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIFSNNILGIEGslliSIAHGFAS----PALFLLVGGILYDRYHSRLiYYYQSLATYMPIFSIY 395
Cdd:PRK12668 266 RLLSYHIVSQVGYMVAGIGIGTALAING----AVAHAFNHilykGLLFMSAGAVLYRTGTEKL-TELGGLYRSMPLTALF 340
|
170
....*....|....*...
gi 22654265 396 LLIAGLFNMGIPLSLNFI 413
Cdd:PRK12668 341 CLVGALSISAFPLFSGFV 358
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
241-442 |
4.49e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 4.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLI-LINLSDVIIIynpLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTpLLGLSNMYIY---IVTFVGLITMLFGSITALKQWDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIaIMS---------------IFSNNILGIEGSLLISIAHGFASPALFLLVgGILYDRYHSRLIYYYQS 384
Cdd:PRK12646 300 GILAYSTISQLGM-IMAmvgigggyaqhqqdaIASIYVFVLFAALFHLMNHAIFKCALFMGV-GIIDHEAGTRDIRILSG 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 22654265 385 LATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTI 442
Cdd:PRK12646 378 MRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFI 435
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
245-401 |
6.21e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.12 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 245 FPVHTWLPLVhAESPISGSIILAGIIIKLAIYAIIRLI-LINLSDVIIiyNPLIyTIGILTIFYIGLITLKQIDIKVIIA 323
Cdd:PRK07390 238 FPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpVLALSPVAL--TVLI-VIGTVTAIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22654265 324 YSSIIHMAIAIMSIFSNNilgIEGSLLISIAHGFASPALFLLVGGILYdRYHSRLIYYYQSLATYMPIFSIYLLIAGL 401
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQ---PDIALLLLLTHAIAKALLFMSVGSIIL-TTITQDLTELGGLWSRMPATTLAFLVGSA 387
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
245-438 |
7.94e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.41 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 245 FPVHTWLPLVHAESPISGSIILaGIIIKLAIYAIIRLILINLSDVIIIynpliyTIGILTIFYIGLITLKQIDIKVIIAY 324
Cdd:MTH00200 109 APGHFWVPDVLQGLSLQTGLIL-STWQKLAPFALLIQLAPALNSNILL------LLGLLSVLVGGWGGLNQTQLRKILAY 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 325 SSIIHMAIAIMSIFSNNILGiegsLLISIAHGFASPALFLlvggiLYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNM 404
Cdd:MTH00200 182 SSIAHLGWLLSGLVYSPNLA----LLYLLLYVIITLTVFL-----LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLG 252
|
170 180 190
....*....|....*....|....*....|....*....
gi 22654265 405 GIPLSLNFIGE-----FLSLNGIFIYNSLFAILSTFSLF 438
Cdd:MTH00200 253 GLPPLTGFFPKwlilqELSKQGLFIYATILLLGSLLSLF 291
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
241-407 |
8.83e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 8.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 241 KTPVFPVHTWLP-LVHAESPISgSIILAGIIIKLAIYAIIRLILInLSDVIIIYNpLIYTIGILTIFYIGLITLKQIDIK 319
Cdd:PRK07376 240 KSAQFPLHVWLPdAMEGPTPIS-ALIHAATMVAAGVFLVARMYPV-FEQFPAVMT-VIAWTGAITAFLGASIALTQNDIK 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 320 VIIAYSSIIHMAIAIMSIfsnNILGIEGSLLISIAHGFASPALFLLVGGILY--------DRYHSRLIYYYQSLATYMPI 391
Cdd:PRK07376 317 KGLAYSTISQLGYMVMAM---GCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHgmeevvghDPVLAQDMRLMGGLRKYMPI 393
|
170
....*....|....*.
gi 22654265 392 FSIYLLIAGLFNMGIP 407
Cdd:PRK07376 394 TAITFLIGCLAISGIP 409
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
246-407 |
8.98e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 38.66 E-value: 8.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 246 PVHTWLP-LVHAESPISgSIILAGIIIKLAIYAIIRL--ILINLSDVIIiynpLIYTIGILTIFYIGLITLKQIDIKVII 322
Cdd:PRK12649 232 PFYIWLPnAMEAPTPVS-AFLHSATMVKAGVYLVARIhpIFSGTEAWFI----LVSGTGMITMVLAGFLAFRQTDIKAIL 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22654265 323 AYSSIIHMAIAIM----SIFSNNILGIEGSLLISIAHGFASPALFlLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLI 398
Cdd:PRK12649 307 AYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLF-LVAGIVAHEAATRDIRKLGGLRKEMPITFIVASI 385
|
....*....
gi 22654265 399 AGLFNMGIP 407
Cdd:PRK12649 386 AALAMAGIP 394
|
|
| |
