NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1261489813|gb|PFH43089|]
View 

hydroperoxide reductase [Mycoplasmoides pneumoniae]

Protein Classification

OsmC family protein( domain architecture ID 10004485)

OsmC (osmotically inducible protein C) family protein may function as a peroxiredoxin or hydroperoxide reductase, catalyzing the reduction of organic and inorganic peroxide substrates to protect the cell against oxidative stress

CATH:  3.30.300.20
EC:  1.11.1.-
Gene Ontology:  GO:0004601|GO:0006979
PubMed:  11429455|28391181
SCOP:  4003336

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
YhfA COG1765
Uncharacterized OsmC-related protein [General function prediction only];
52-140 1.05e-10

Uncharacterized OsmC-related protein [General function prediction only];


:

Pssm-ID: 441371  Cd Length: 126  Bit Score: 55.24  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1261489813  52 CELATANLMAPAKMITINKLLMNVTGSRSTNPTdgyfGLREINLHWEIHSPNSETEIKEFIDFVSKRCPAHNTLQGVsql 131
Cdd:COG1765    46 CTAITVRMIAKKKGIDLEGLEVEVEGDRDEEPK----GFTKIRVTITVDGDLSEEQLERLLELAEKYCPVSDTLRNG--- 118


                  ....*....
gi 1261489813 132 kINVNVTLV 140
Cdd:COG1765   119 -VEITTELE 126
 
Name Accession Description Interval E-value
YhfA COG1765
Uncharacterized OsmC-related protein [General function prediction only];
52-140 1.05e-10

Uncharacterized OsmC-related protein [General function prediction only];


Pssm-ID: 441371  Cd Length: 126  Bit Score: 55.24  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1261489813  52 CELATANLMAPAKMITINKLLMNVTGSRSTNPTdgyfGLREINLHWEIHSPNSETEIKEFIDFVSKRCPAHNTLQGVsql 131
Cdd:COG1765    46 CTAITVRMIAKKKGIDLEGLEVEVEGDRDEEPK----GFTKIRVTITVDGDLSEEQLERLLELAEKYCPVSDTLRNG--- 118


                  ....*....
gi 1261489813 132 kINVNVTLV 140
Cdd:COG1765   119 -VEITTELE 126
OsmC pfam02566
OsmC-like protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found ...
 34-134 1.88e-10

OsmC-like protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.


Pssm-ID: 460594  Cd Length: 99  Bit Score: 54.25  E-value: 1.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1261489813  34 HTAKGFGPLAALLSGLAACELATANLMAPAKMITINKLLMNVTGSRStnpTDGYFGLREINLHWEIHSPNSETE-IKEFI 112
Cdd:pfam02566   1 GDGSGPNPEELLLAALASCFAITLRAIAKKKGIKLEDLEVEVEGERD---PEGALGFTEIRLRVEVKTPDADEEkLKKLL 77

                          90       100
                  ....*....|....*....|..
gi 1261489813 113 DFVSKRCPAHNTLQGVSQLKIN 134
Cdd:pfam02566  78 ELAEKKCPVANTLKNGIKVELE 99
 
Name Accession Description Interval E-value
YhfA COG1765
Uncharacterized OsmC-related protein [General function prediction only];
52-140 1.05e-10

Uncharacterized OsmC-related protein [General function prediction only];


Pssm-ID: 441371  Cd Length: 126  Bit Score: 55.24  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1261489813  52 CELATANLMAPAKMITINKLLMNVTGSRSTNPTdgyfGLREINLHWEIHSPNSETEIKEFIDFVSKRCPAHNTLQGVsql 131
Cdd:COG1765    46 CTAITVRMIAKKKGIDLEGLEVEVEGDRDEEPK----GFTKIRVTITVDGDLSEEQLERLLELAEKYCPVSDTLRNG--- 118


                  ....*....
gi 1261489813 132 kINVNVTLV 140
Cdd:COG1765   119 -VEITTELE 126
OsmC pfam02566
OsmC-like protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found ...
 34-134 1.88e-10

OsmC-like protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.


Pssm-ID: 460594  Cd Length: 99  Bit Score: 54.25  E-value: 1.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1261489813  34 HTAKGFGPLAALLSGLAACELATANLMAPAKMITINKLLMNVTGSRStnpTDGYFGLREINLHWEIHSPNSETE-IKEFI 112
Cdd:pfam02566   1 GDGSGPNPEELLLAALASCFAITLRAIAKKKGIKLEDLEVEVEGERD---PEGALGFTEIRLRVEVKTPDADEEkLKKLL 77

                          90       100
                  ....*....|....*....|..
gi 1261489813 113 DFVSKRCPAHNTLQGVSQLKIN 134
Cdd:pfam02566  78 ELAEKKCPVANTLKNGIKVELE 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH