|
Name |
Accession |
Description |
Interval |
E-value |
| Nth |
COG0177 |
Endonuclease III [Replication, recombination and repair]; |
16-192 |
8.57e-69 |
|
Endonuclease III [Replication, recombination and repair];
Pssm-ID: 439947 [Multi-domain] Cd Length: 198 Bit Score: 208.80 E-value: 8.57e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 16 LEALKNEIPliRLAGER-WETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSK 94
Cdd:COG0177 1 LERLKELYP--DAKTELdYRDPFELLVATILSAQTTDERVNKATPRLFARYPTPEALAAADLEELEELIRPIGLYRNKAK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 95 NILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKKPEIVEESLKELF 173
Cdd:COG0177 79 NIIALARILVEKYGGEVPETREELESLPGVGRKTANVVLNFaFGKPAIAVDTHVHRVSNRLGLVPGKDPEEVEKDLMKLI 158
|
170
....*....|....*....
gi 1276438894 174 PKKIWSEINPILVRFGKTH 192
Cdd:COG0177 159 PKEYWGDLHHLLILHGRYI 177
|
|
| nth |
TIGR01083 |
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily ... |
10-192 |
4.15e-56 |
|
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273434 [Multi-domain] Cd Length: 192 Bit Score: 176.42 E-value: 4.15e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 10 KRALKQLEALKNEIPLIRLAgERWETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFY 89
Cdd:TIGR01083 2 QKAQEILERLRKNYPHPTTE-LDFNNPFELLVATILSAQATDKRVNKATPKLFEVYPTPQALAQAGLEELEEYIKSIGLY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 90 HNKSKNILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKKPEIVEES 168
Cdd:TIGR01083 81 RNKAKNIIELCRKLVERYGGEVPEDREELVKLPGVGRKTANVVLNVaFGIPAIAVDTHVFRVSNRLGLSKGKDPIKVEED 160
|
170 180
....*....|....*....|....
gi 1276438894 169 LKELFPKKIWSEINPILVRFGKTH 192
Cdd:TIGR01083 161 LMKLVPREFWVKLHHWLILHGRYT 184
|
|
| ENDO3c |
smart00478 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
45-191 |
2.73e-42 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 214684 [Multi-domain] Cd Length: 149 Bit Score: 139.71 E-value: 2.73e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 45 LSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVPKNFEELISLPGV 124
Cdd:smart00478 1 LSQQTTDERVNKATERLFEKFPTPEDLAAADEEELEELIRGLGFYRRKARYLIELARILVEEYGGEVPDDREELLKLPGV 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1276438894 125 GRKTANVFLS-EFNHDAIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPKKIWSEINPILVRFGKT 191
Cdd:smart00478 81 GRKTANAVLSfALGKPFIPVDTHVLRIAKRLGLVDKKStPEEVEKLLEKLLPEEDWRELNLLLIDFGRT 149
|
|
| ENDO3c |
cd00056 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
37-189 |
3.88e-42 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 238013 [Multi-domain] Cd Length: 158 Bit Score: 139.68 E-value: 3.88e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 37 FQTLISIILSARTRDEITIKVCKNLFENF-PNVEKLSKAKLKKIEKLINPINfYHNKSKNILNCTKEIIKRFDSKV---P 112
Cdd:cd00056 1 FEVLVSEILSQQTTDKAVNKAYERLFERYgPTPEALAAADEEELRELIRSLG-YRRKAKYLKELARAIVEGFGGLVlddP 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1276438894 113 KNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPKKIWSEINPILVRFG 189
Cdd:cd00056 80 DAREELLALPGVGRKTANVVLLFaLGPDAFPVDTHVRRVLKRLGLIPKKKtPEELEELLEELLPKPYWGEANQALMDLG 158
|
|
| HhH-GPD |
pfam00730 |
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of ... |
41-175 |
1.21e-32 |
|
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases. The methyl-CPG binding protein MBD4 also contains a related domain that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family.
Pssm-ID: 425841 [Multi-domain] Cd Length: 141 Bit Score: 114.69 E-value: 1.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 41 ISIILSARTRDEITIKVCKNLFEN-FPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVPKNFEELI 119
Cdd:pfam00730 1 VSAILSQQTSDKAVNKITERLFEKfFPTPEDLADADEEELRELIRGLGFYRRKAKYLKELARILVEGYGGEVPLDEEELE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1276438894 120 S-LPGVGRKTANVFLS-EFNHD--AIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPK 175
Cdd:pfam00730 81 AlLKGVGRWTAEAVLIfALGRPdpLPVVDTHVRRVLKRLGLIKEKPtPKEVERELEELWPP 141
|
|
| PRK10702 |
PRK10702 |
endonuclease III; Provisional |
33-174 |
6.07e-19 |
|
endonuclease III; Provisional
Pssm-ID: 182661 [Multi-domain] Cd Length: 211 Bit Score: 81.22 E-value: 6.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 33 WETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVP 112
Cdd:PRK10702 26 FSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENVIKTCRILLEQHNGEVP 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1276438894 113 KNFEELISLPGVGRKTANVFL-SEFNHDAIGVDTHVNYISNYLKWVNSKKPEIVEESLKELFP 174
Cdd:PRK10702 106 EDRAALEALPGVGRKTANVVLnTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVP 168
|
|
| transpos_IS110 |
NF033542 |
IS110 family transposase; Proteins of this family are DEDD (Asp, Glu, Asp, Asp) type ... |
10-135 |
5.48e-04 |
|
IS110 family transposase; Proteins of this family are DEDD (Asp, Glu, Asp, Asp) type transposases, which are encoded by the IS110 family elements.
Pssm-ID: 468073 [Multi-domain] Cd Length: 345 Bit Score: 40.01 E-value: 5.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 10 KRALKQLEALKNeipliRLAGERWETPfqtlisIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINfy 89
Cdd:NF033542 131 EQLVKERTALKN-----RLRGLLAEFG------IALPKAGLAALRRQLRAILEDLDNELPPLARELLRRLLERLLALE-- 197
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1276438894 90 hnksKNILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE 135
Cdd:NF033542 198 ----EQIKEIEKEIEALAREHPDAACQRLMSIPGIGPITAAALLAE 239
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Nth |
COG0177 |
Endonuclease III [Replication, recombination and repair]; |
16-192 |
8.57e-69 |
|
Endonuclease III [Replication, recombination and repair];
Pssm-ID: 439947 [Multi-domain] Cd Length: 198 Bit Score: 208.80 E-value: 8.57e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 16 LEALKNEIPliRLAGER-WETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSK 94
Cdd:COG0177 1 LERLKELYP--DAKTELdYRDPFELLVATILSAQTTDERVNKATPRLFARYPTPEALAAADLEELEELIRPIGLYRNKAK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 95 NILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKKPEIVEESLKELF 173
Cdd:COG0177 79 NIIALARILVEKYGGEVPETREELESLPGVGRKTANVVLNFaFGKPAIAVDTHVHRVSNRLGLVPGKDPEEVEKDLMKLI 158
|
170
....*....|....*....
gi 1276438894 174 PKKIWSEINPILVRFGKTH 192
Cdd:COG0177 159 PKEYWGDLHHLLILHGRYI 177
|
|
| nth |
TIGR01083 |
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily ... |
10-192 |
4.15e-56 |
|
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273434 [Multi-domain] Cd Length: 192 Bit Score: 176.42 E-value: 4.15e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 10 KRALKQLEALKNEIPLIRLAgERWETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFY 89
Cdd:TIGR01083 2 QKAQEILERLRKNYPHPTTE-LDFNNPFELLVATILSAQATDKRVNKATPKLFEVYPTPQALAQAGLEELEEYIKSIGLY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 90 HNKSKNILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKKPEIVEES 168
Cdd:TIGR01083 81 RNKAKNIIELCRKLVERYGGEVPEDREELVKLPGVGRKTANVVLNVaFGIPAIAVDTHVFRVSNRLGLSKGKDPIKVEED 160
|
170 180
....*....|....*....|....
gi 1276438894 169 LKELFPKKIWSEINPILVRFGKTH 192
Cdd:TIGR01083 161 LMKLVPREFWVKLHHWLILHGRYT 184
|
|
| ENDO3c |
smart00478 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
45-191 |
2.73e-42 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 214684 [Multi-domain] Cd Length: 149 Bit Score: 139.71 E-value: 2.73e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 45 LSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVPKNFEELISLPGV 124
Cdd:smart00478 1 LSQQTTDERVNKATERLFEKFPTPEDLAAADEEELEELIRGLGFYRRKARYLIELARILVEEYGGEVPDDREELLKLPGV 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1276438894 125 GRKTANVFLS-EFNHDAIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPKKIWSEINPILVRFGKT 191
Cdd:smart00478 81 GRKTANAVLSfALGKPFIPVDTHVLRIAKRLGLVDKKStPEEVEKLLEKLLPEEDWRELNLLLIDFGRT 149
|
|
| ENDO3c |
cd00056 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
37-189 |
3.88e-42 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 238013 [Multi-domain] Cd Length: 158 Bit Score: 139.68 E-value: 3.88e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 37 FQTLISIILSARTRDEITIKVCKNLFENF-PNVEKLSKAKLKKIEKLINPINfYHNKSKNILNCTKEIIKRFDSKV---P 112
Cdd:cd00056 1 FEVLVSEILSQQTTDKAVNKAYERLFERYgPTPEALAAADEEELRELIRSLG-YRRKAKYLKELARAIVEGFGGLVlddP 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1276438894 113 KNFEELISLPGVGRKTANVFLSE-FNHDAIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPKKIWSEINPILVRFG 189
Cdd:cd00056 80 DAREELLALPGVGRKTANVVLLFaLGPDAFPVDTHVRRVLKRLGLIPKKKtPEELEELLEELLPKPYWGEANQALMDLG 158
|
|
| HhH-GPD |
pfam00730 |
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of ... |
41-175 |
1.21e-32 |
|
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases. The methyl-CPG binding protein MBD4 also contains a related domain that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family.
Pssm-ID: 425841 [Multi-domain] Cd Length: 141 Bit Score: 114.69 E-value: 1.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 41 ISIILSARTRDEITIKVCKNLFEN-FPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVPKNFEELI 119
Cdd:pfam00730 1 VSAILSQQTSDKAVNKITERLFEKfFPTPEDLADADEEELRELIRGLGFYRRKAKYLKELARILVEGYGGEVPLDEEELE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1276438894 120 S-LPGVGRKTANVFLS-EFNHD--AIGVDTHVNYISNYLKWVNSKK-PEIVEESLKELFPK 175
Cdd:pfam00730 81 AlLKGVGRWTAEAVLIfALGRPdpLPVVDTHVRRVLKRLGLIKEKPtPKEVERELEELWPP 141
|
|
| PRK10702 |
PRK10702 |
endonuclease III; Provisional |
33-174 |
6.07e-19 |
|
endonuclease III; Provisional
Pssm-ID: 182661 [Multi-domain] Cd Length: 211 Bit Score: 81.22 E-value: 6.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 33 WETPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEIIKRFDSKVP 112
Cdd:PRK10702 26 FSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENVIKTCRILLEQHNGEVP 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1276438894 113 KNFEELISLPGVGRKTANVFL-SEFNHDAIGVDTHVNYISNYLKWVNSKKPEIVEESLKELFP 174
Cdd:PRK10702 106 EDRAALEALPGVGRKTANVVLnTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVP 168
|
|
| PRK10880 |
PRK10880 |
adenine DNA glycosylase; |
35-134 |
3.82e-08 |
|
adenine DNA glycosylase;
Pssm-ID: 182805 [Multi-domain] Cd Length: 350 Bit Score: 52.40 E-value: 3.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 35 TPFQTLISIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINFYhNKSKNILNCTKEIIKRFDSKVPKN 114
Cdd:PRK10880 29 TPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYY-ARARNLHKAAQQVATLHGGEFPET 107
|
90 100
....*....|....*....|
gi 1276438894 115 FEELISLPGVGRKTANVFLS 134
Cdd:PRK10880 108 FEEVAALPGVGRSTAGAILS 127
|
|
| HHH |
pfam00633 |
Helix-hairpin-helix motif; The helix-hairpin-helix DNA-binding motif is found to be duplicated ... |
106-134 |
1.42e-06 |
|
Helix-hairpin-helix motif; The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.
Pssm-ID: 425789 [Multi-domain] Cd Length: 30 Bit Score: 43.17 E-value: 1.42e-06
10 20
....*....|....*....|....*....
gi 1276438894 106 RFDSKVPKNFEELISLPGVGRKTANVFLS 134
Cdd:pfam00633 1 SLEGLIPASVEELLALPGVGPKTAEAILS 29
|
|
| PRK13913 |
PRK13913 |
3-methyladenine DNA glycosylase; Provisional |
33-133 |
1.01e-04 |
|
3-methyladenine DNA glycosylase; Provisional
Pssm-ID: 184390 Cd Length: 218 Bit Score: 41.76 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 33 WET--PFQTLISIILSARTRDEITIKVCKNLFENF-------PNVEKLSKAKLKKIEKLINPINFYHNKSKNILNCTKEI 103
Cdd:PRK13913 25 WPNalKFEALLGAVLTQNTKFEAVEKSLENLKNAFilenddeINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSENI 104
|
90 100 110
....*....|....*....|....*....|....
gi 1276438894 104 IKRFDS----KVPKNFEELISLPGVGRKTANVFL 133
Cdd:PRK13913 105 LKDFGSfenfKQEVTREWLLDQKGIGKESADAIL 138
|
|
| PRK13910 |
PRK13910 |
DNA glycosylase MutY; Provisional |
61-133 |
1.11e-04 |
|
DNA glycosylase MutY; Provisional
Pssm-ID: 172427 [Multi-domain] Cd Length: 289 Bit Score: 41.93 E-value: 1.11e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1276438894 61 LFENFPNVEKLSKAKLKKIEKLINPINFYhNKSKNILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFL 133
Cdd:PRK13910 18 FLEAFPTLKDLANAPLEEVLLLWRGLGYY-SRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIGAYTANAIL 89
|
|
| transpos_IS110 |
NF033542 |
IS110 family transposase; Proteins of this family are DEDD (Asp, Glu, Asp, Asp) type ... |
10-135 |
5.48e-04 |
|
IS110 family transposase; Proteins of this family are DEDD (Asp, Glu, Asp, Asp) type transposases, which are encoded by the IS110 family elements.
Pssm-ID: 468073 [Multi-domain] Cd Length: 345 Bit Score: 40.01 E-value: 5.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1276438894 10 KRALKQLEALKNeipliRLAGERWETPfqtlisIILSARTRDEITIKVCKNLFENFPNVEKLSKAKLKKIEKLINPINfy 89
Cdd:NF033542 131 EQLVKERTALKN-----RLRGLLAEFG------IALPKAGLAALRRQLRAILEDLDNELPPLARELLRRLLERLLALE-- 197
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1276438894 90 hnksKNILNCTKEIIKRFDSKVPKNFEELISLPGVGRKTANVFLSE 135
Cdd:NF033542 198 ----EQIKEIEKEIEALAREHPDAACQRLMSIPGIGPITAAALLAE 239
|
|
| DUF763 |
pfam05559 |
Protein of unknown function (DUF763); This family consists of several uncharacterized ... |
71-128 |
6.98e-03 |
|
Protein of unknown function (DUF763); This family consists of several uncharacterized bacterial and archaeal proteins of unknown function.
Pssm-ID: 461678 Cd Length: 318 Bit Score: 36.70 E-value: 6.98e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1276438894 71 LSKAKLKKIEKLINPIN-------FYHNKSKNILN----CTKEIIKRFDSKVPKNFEELISLPGVGRKT 128
Cdd:pfam05559 212 LVRENPEKLLRELKRARaillylpRRHDVLAEDLDlkrkLLWKVLEKAYERQPSNFEELLLIPGVGPST 280
|
|
| |
