hypothetical protein COZ60_00055 [Candidatus Bathyarchaeota archaeon CG_4_8_14_3_um_filter_42_8]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| PatZN super family | cl34077 | Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
6-63 | 2.85e-22 | ||
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; The actual alignment was detected with superfamily member COG1042: Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 88.64 E-value: 2.85e-22
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| Name | Accession | Description | Interval | E-value | ||
| PatZN | COG1042 | Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
6-63 | 2.85e-22 | ||
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 88.64 E-value: 2.85e-22
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| AcCoA-syn-alpha | TIGR02717 | acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it ... |
7-63 | 1.60e-19 | ||
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. Pssm-ID: 131764 [Multi-domain] Cd Length: 447 Bit Score: 80.82 E-value: 1.60e-19
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| CoA_binding | smart00881 | CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
11-50 | 1.03e-08 | ||
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 47.89 E-value: 1.03e-08
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| CoA_binding_2 | pfam13380 | CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
15-56 | 2.04e-08 | ||
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. Pssm-ID: 433162 [Multi-domain] Cd Length: 116 Bit Score: 47.15 E-value: 2.04e-08
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| Name | Accession | Description | Interval | E-value | ||
| PatZN | COG1042 | Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
6-63 | 2.85e-22 | ||
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 88.64 E-value: 2.85e-22
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| AcCoA-syn-alpha | TIGR02717 | acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it ... |
7-63 | 1.60e-19 | ||
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. Pssm-ID: 131764 [Multi-domain] Cd Length: 447 Bit Score: 80.82 E-value: 1.60e-19
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| CoA_binding | smart00881 | CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
11-50 | 1.03e-08 | ||
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 47.89 E-value: 1.03e-08
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| CoA_binding_2 | pfam13380 | CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
15-56 | 2.04e-08 | ||
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. Pssm-ID: 433162 [Multi-domain] Cd Length: 116 Bit Score: 47.15 E-value: 2.04e-08
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| YccU | COG1832 | Predicted CoA-binding protein [General function prediction only]; |
12-62 | 2.82e-05 | ||
Predicted CoA-binding protein [General function prediction only]; Pssm-ID: 441437 [Multi-domain] Cd Length: 138 Bit Score: 39.34 E-value: 2.82e-05
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| Blast search parameters | ||||
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