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hypothetical protein COU94_01640 [Candidatus Shapirobacteria bacterium CG10_big_fil_rev_8_21_14_0_10_38_8]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Glucodextran_B super family | cl07671 | Glucodextranase, domain B; Members of this family adopt a structure consisting of seven ... |
153-232 | 5.99e-09 | |||
Glucodextranase, domain B; Members of this family adopt a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. They act as cell wall anchors, where they interact with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, Domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface. The actual alignment was detected with superfamily member pfam09136: Pssm-ID: 430428 [Multi-domain] Cd Length: 83 Bit Score: 51.72 E-value: 5.99e-09
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Name | Accession | Description | Interval | E-value | |||
Glucodextran_B | pfam09136 | Glucodextranase, domain B; Members of this family adopt a structure consisting of seven ... |
153-232 | 5.99e-09 | |||
Glucodextranase, domain B; Members of this family adopt a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. They act as cell wall anchors, where they interact with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, Domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface. Pssm-ID: 430428 [Multi-domain] Cd Length: 83 Bit Score: 51.72 E-value: 5.99e-09
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Ca_tandemer | NF033510 | Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the ... |
143-226 | 5.22e-05 | |||
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the biofilm-associated protein Bap of Acinetobacter baumannii (which can exceed 8000 amino acids in length), the calcium-stabilized ice-binding adhesin of the Antarctic bacterium Marinomonas primoryensis, and the giant calcium-binding adhesin SiiE of Salmonella enterica. Pssm-ID: 411149 [Multi-domain] Cd Length: 97 Bit Score: 41.12 E-value: 5.22e-05
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Name | Accession | Description | Interval | E-value | |||
Glucodextran_B | pfam09136 | Glucodextranase, domain B; Members of this family adopt a structure consisting of seven ... |
153-232 | 5.99e-09 | |||
Glucodextranase, domain B; Members of this family adopt a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. They act as cell wall anchors, where they interact with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, Domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface. Pssm-ID: 430428 [Multi-domain] Cd Length: 83 Bit Score: 51.72 E-value: 5.99e-09
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Ca_tandemer | NF033510 | Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the ... |
143-226 | 5.22e-05 | |||
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the biofilm-associated protein Bap of Acinetobacter baumannii (which can exceed 8000 amino acids in length), the calcium-stabilized ice-binding adhesin of the Antarctic bacterium Marinomonas primoryensis, and the giant calcium-binding adhesin SiiE of Salmonella enterica. Pssm-ID: 411149 [Multi-domain] Cd Length: 97 Bit Score: 41.12 E-value: 5.22e-05
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Big_13 | pfam19077 | Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ... |
151-229 | 8.40e-04 | |||
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins. Pssm-ID: 465968 [Multi-domain] Cd Length: 102 Bit Score: 37.63 E-value: 8.40e-04
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Blast search parameters | ||||
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