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Conserved domains on  [gi|1301392461|gb|PKB60384|]
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MAG: ATP synthase F1 subunit gamma [SAR202 cluster bacterium Ae2-Chloro-G1]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10000722)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-285 1.32e-130

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 439994  Cd Length: 288  Bit Score: 372.17  E-value: 1.32e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVG 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYD---HPLLEEREVKRVG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:COG0224    78 LIVITSDRGLCGGFNSNVLKAAEELIkelQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELL 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPA---ALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAI 234
Cdd:COG0224   158 DAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESA 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1301392461 235 ASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:COG0224   238 ASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-285 1.32e-130

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 372.17  E-value: 1.32e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVG 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYD---HPLLEEREVKRVG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:COG0224    78 LIVITSDRGLCGGFNSNVLKAAEELIkelQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELL 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPA---ALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAI 234
Cdd:COG0224   158 DAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESA 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1301392461 235 ASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:COG0224   238 ASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-285 1.00e-123

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 354.42  E-value: 1.00e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDsvdiPSLLQVREVAKVG 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD----HPLLVEREVKRVG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:PRK05621   77 YIVVTSDRGLCGGYNSNIIKKVLELIkelEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIASE 237
Cdd:PRK05621  157 DAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASE 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1301392461 238 QSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:PRK05621  237 QAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-281 2.28e-119

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 343.35  E-value: 2.28e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   3 SLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVGLV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDS---HPLLERREVKKVGLI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  83 VITPDRGLAGGLHSNVNRVVTPFILSQEVPVEN---IVVGRKGRDFLVRANQDVKAVFTD-LSDRPSLIDTTPIARLIIE 158
Cdd:pfam00231  78 VITSDRGLCGGFNSNVIKAARALIEELLAEGKEvklIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 159 GYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAAL--TGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIAS 236
Cdd:pfam00231 158 AFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEeeEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1301392461 237 EQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGG 281
Cdd:pfam00231 238 EQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSG 282
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-281 4.01e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.60  E-value: 4.01e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   2 PSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVGL 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDED---PPLLEKREVKKVLL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  82 VVITPDRGLAGGLHSNVNRVVTPFI-LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLIIEGY 160
Cdd:cd12151    78 IVITSDRGLCGGFNSNIIKAAEELIkEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDF 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 161 SNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPA---ALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIASE 237
Cdd:cd12151   158 LNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeeEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASE 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1301392461 238 QSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGG 281
Cdd:cd12151   238 QAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-285 3.96e-104

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 304.99  E-value: 3.96e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   2 PSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSddSVDIPsLLQVREVAKVGL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLL--NVDHP-LLKSREVKKVGI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  82 VVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLIIE 158
Cdd:TIGR01146  78 LVITSDRGLCGGYNSNVLKRVRARAkelKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 159 GYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAG--YIYEPDANNVLDSILPQYVEMQVYHAILEAIAS 236
Cdd:TIGR01146 158 AFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSqdYIFEPDEEEILDDLLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1301392461 237 EQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:TIGR01146 238 EQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-285 1.32e-130

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 372.17  E-value: 1.32e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVG 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYD---HPLLEEREVKRVG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:COG0224    78 LIVITSDRGLCGGFNSNVLKAAEELIkelQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELL 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPA---ALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAI 234
Cdd:COG0224   158 DAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESA 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1301392461 235 ASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:COG0224   238 ASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-285 1.00e-123

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 354.42  E-value: 1.00e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDsvdiPSLLQVREVAKVG 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD----HPLLVEREVKRVG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:PRK05621   77 YIVVTSDRGLCGGYNSNIIKKVLELIkelEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIASE 237
Cdd:PRK05621  157 DAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASE 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1301392461 238 QSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:PRK05621  237 QAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-281 2.28e-119

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 343.35  E-value: 2.28e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   3 SLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVGLV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDS---HPLLERREVKKVGLI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  83 VITPDRGLAGGLHSNVNRVVTPFILSQEVPVEN---IVVGRKGRDFLVRANQDVKAVFTD-LSDRPSLIDTTPIARLIIE 158
Cdd:pfam00231  78 VITSDRGLCGGFNSNVIKAARALIEELLAEGKEvklIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 159 GYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAAL--TGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIAS 236
Cdd:pfam00231 158 AFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEeeEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1301392461 237 EQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGG 281
Cdd:pfam00231 238 EQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSG 282
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-281 4.01e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.60  E-value: 4.01e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   2 PSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVGL 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDED---PPLLEKREVKKVLL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  82 VVITPDRGLAGGLHSNVNRVVTPFI-LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLIIEGY 160
Cdd:cd12151    78 IVITSDRGLCGGFNSNIIKAAEELIkEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDF 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 161 SNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPA---ALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIASE 237
Cdd:cd12151   158 LNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeeEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASE 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1301392461 238 QSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGG 281
Cdd:cd12151   238 QAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.43e-107

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 313.66  E-value: 1.43e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAqRSDDSVDIPSLLQVREVAK-V 79
Cdd:PRK14111    1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTA-RTVGAARVGPLLEKRPTVKrV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  80 GLVVITPDRGLAGGLHSNVNRVVTPFILSQEVPVEN---IVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLI 156
Cdd:PRK14111   80 ALILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTvdvIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 157 IEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIAS 236
Cdd:PRK14111  160 INGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVLESIAS 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1301392461 237 EQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALEG 287
Cdd:PRK14111  240 EHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALGS 290
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-285 3.96e-104

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 304.99  E-value: 3.96e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   2 PSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSddSVDIPsLLQVREVAKVGL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLL--NVDHP-LLKSREVKKVGI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  82 VVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLIIE 158
Cdd:TIGR01146  78 LVITSDRGLCGGYNSNVLKRVRARAkelKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 159 GYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAG--YIYEPDANNVLDSILPQYVEMQVYHAILEAIAS 236
Cdd:TIGR01146 158 AFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSqdYIFEPDEEEILDDLLPRYLESQIYGALLESAAS 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1301392461 237 EQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:TIGR01146 238 EQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-287 3.83e-96

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 284.64  E-value: 3.83e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDDSvdiPSLLQVREVAKVG 80
Cdd:PRK13423    1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDA---HPLLVPREVKKAL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFILSQEVPVENI---VVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:PRK13423   78 LVVVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEIsltTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELI 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAAlTGPSKAG--YIYEPDANNVLDSILPQYVEMQVYHAILEAIA 235
Cdd:PRK13423  158 EGYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPE-AADDEYLpeYIYEPSRDALLAELLPKHVEVQIYRALLESVA 236

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1301392461 236 SEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALEG 287
Cdd:PRK13423  237 SEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALKG 288
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.80e-71

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 221.93  E-value: 1.80e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAqRSDDSVDipSLLQVREVAK-V 79
Cdd:PRK13424    1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLAS-RADSSAH--PLLEVREEIKtC 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  80 GLVVITPDRGLAGGLhsNVNRVVTPFILSQEVPVEN-----IVVGRKGRDFLVRANQDVkavFTDLSDRPSLID---TTP 151
Cdd:PRK13424   78 GIVLITSDRGLCGSF--NANLINAALKLAKQKTAEGktvkfYCVGKKGRDAIRKTDFEI---VTAYADQMTSFDfqlANS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 152 IARLIIEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAAL----TGPSKAgYIYEPDANNVLDSILPQYVEMQVY 227
Cdd:PRK13424  153 IGLEVIDGYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAeeeeAGASSE-YIYEPSVEGLLAELLPRFIKVQIY 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 228 HAILEAIASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALEG 287
Cdd:PRK13424  232 RGLLDTSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALKG 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-286 1.68e-70

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 219.43  E-value: 1.68e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSddSVDIPSLLQVREVAKVG 80
Cdd:PRK13427    1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEG--VVHSPYLRRPEKIRTVA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFILSQE---VPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLII 157
Cdd:PRK13427   79 LLIITANRGLCGGFNSNLNRMAKARIAELKkkgVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFM 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 158 EGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEP--AALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAIA 235
Cdd:PRK13427  159 ERFANESVDAVEIASTVYYSAASQKPETTRVLPLEPptAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANA 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1301392461 236 SEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALE 286
Cdd:PRK13427  239 SEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-286 7.91e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 205.00  E-value: 7.91e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSL--RDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQrsddsVDIPS--LLQVREV 76
Cdd:PRK14110    1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAH-----IDREShpLLERREE 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  77 AKVGLVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDL-SDRPSLIDTTPI 152
Cdd:PRK14110   76 KNVDLVIITADRGLAGAFNSNVIKTAERLIqekQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVfRKEINFSVVKEV 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 153 ARLIIEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEP-AALTGPSKAG-YIYEPDANNVLDSILPQYVEMQVYHAI 230
Cdd:PRK14110  156 GGILASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVeAQEKKLDELSvYNIEVSEEEFLDKLLQLYLNYQLYRAL 235

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1301392461 231 LEAIASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALE 286
Cdd:PRK14110  236 VESNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-285 3.16e-61

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 195.77  E-value: 3.16e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQRSDdsVDIPsLLQVREVAKVG 80
Cdd:PRK13426    1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLD--VESP-FTVERPVKRVA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFILS-QEVPVENIV---VGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIARLI 156
Cdd:PRK13426   78 IVVFSSNTSLCGGFNANIIKLLLQTIGEyRTLGQDNILiypVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRL 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 157 IEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLP-----VEPAALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAIL 231
Cdd:PRK13426  158 MELFLEGEIDKVELIYHHFKSMGVQVLTRETYLPidlsqEKNAEHAGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALL 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1301392461 232 EAIASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:PRK13426  238 DSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-287 4.21e-60

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 192.72  E-value: 4.21e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAqRSDDSVDiPSLLQVREVAKVG 80
Cdd:PRK13425    1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSA-KVDTSLN-PLLSPRSEVNKVL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  81 LVVITPDRGLAGGLHSNVNRVVTPFI------LSQEVPVENIVVGRKGRDFLVRANQDVKAVFTDLSDRPSLIDTTPIAR 154
Cdd:PRK13425   79 VILITSDRGLCGAFNTNIIKLAQKVIhedyaaLHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAE 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 155 LIIEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAGYIYEPDANNVLDSILPQYVEMQVYHAILEAI 234
Cdd:PRK13425  159 TASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLESN 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1301392461 235 ASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIALEG 287
Cdd:PRK13425  239 AAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQG 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-285 2.97e-46

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 157.13  E-value: 2.97e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461   1 MPSLRDVRRRIRSVENTGKVTNAMSLVAASKMRRAQNSVLEGRPYSEKIQEIISHLAAQrsddSVDIPS-LLQVREVAKV 79
Cdd:PRK13422    1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAA----SIDYPNpYLFDRDVKRV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461  80 GLVVITPDRGLAGGLHSNVNRVVTPFI---LSQEVPVENIVVGRKGRDF---LVRANQDVKAVFTDLSDRPSLIDTTPIA 153
Cdd:PRK13422   77 GYIVTSTDRGLCGGLNINLFKHVLKEIknnIEDRVGVDVCVIGSKAENFfakLKDVNIVATAHYNDKDKEGSIRAIGGAV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1301392461 154 RLIIEGYSNREVDEVYIAYTQFVSTMSQQAVIEKLLPVEPAALTGPSKAG----------YIYEPDANNVLDSILPQYVE 223
Cdd:PRK13422  157 KVMLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANkekatkghwdYIYERDIEEVLNALCIRYIE 236

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1301392461 224 MQVYHAILEAIASEQSARMVAMRSATDNANALGQDLTLVMNKIRQDSITNELLDLIGGVIAL 285
Cdd:PRK13422  237 AQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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