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Conserved domains on  [gi|1308682727|gb|PKM52731|]
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glycogen phosphorylase [Firmicutes bacterium HGW-Firmicutes-7]

Protein Classification

glycogen/starch/alpha-glucan phosphorylase( domain architecture ID 10136827)

glycogen/starch/alpha-glucan phosphorylase uses phosphate to catalyze the cleavage of alpha 1,4-linkages between pairs of glucose residues at the end of glucose polymers or oligomers, releasing alpha-D-glucose 1-phosphate

CATH:  3.40.50.2000
CAZY:  GT35
EC:  2.4.1.1
PubMed:  11340058|11949930
SCOP:  4000830

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
12-811 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


:

Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1328.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  12 KEAVLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDI 91
Cdd:cd04300     1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  92 IKEVLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGN 171
Cdd:cd04300    81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 172 PFEIRRDEYGVEIKFGGNVRVVKgDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDY 251
Cdd:cd04300   161 PWEIRRPEVSVPVRFGGRVEEVP-DGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDY 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 252 NKAVEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELM 331
Cdd:cd04300   240 IRAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSEFPDKVAIQLNDTHPALAIPELM 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 332 RVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAI 411
Cdd:cd04300   320 RILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVDRIRRMSI 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 412 VSDG-QIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWI 490
Cdd:cd04300   400 IEEGkQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALITETIGDDWV 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 491 TDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRE 570
Cdd:cd04300   480 TDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHIIYLYLRIKE 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 571 NPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKE 650
Cdd:cd04300   560 GPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKE 639
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 651 ASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKmIHEKSYDPWELYNNDQAIRKVVTQLINGFFS 730
Cdd:cd04300   640 ASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEA-LRKNGYYPADYYENDPRLKRVLDQIISGTFS 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 731 PENPDLFRVIYDSLLKTEgvpaDQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWE 810
Cdd:cd04300   719 PGDPDEFRPLVDSLLNGN----DEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAKDIWN 794

                  .
gi 1308682727 811 L 811
Cdd:cd04300   795 V 795
 
Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
12-811 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1328.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  12 KEAVLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDI 91
Cdd:cd04300     1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  92 IKEVLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGN 171
Cdd:cd04300    81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 172 PFEIRRDEYGVEIKFGGNVRVVKgDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDY 251
Cdd:cd04300   161 PWEIRRPEVSVPVRFGGRVEEVP-DGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDY 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 252 NKAVEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELM 331
Cdd:cd04300   240 IRAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSEFPDKVAIQLNDTHPALAIPELM 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 332 RVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAI 411
Cdd:cd04300   320 RILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVDRIRRMSI 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 412 VSDG-QIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWI 490
Cdd:cd04300   400 IEEGkQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALITETIGDDWV 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 491 TDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRE 570
Cdd:cd04300   480 TDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHIIYLYLRIKE 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 571 NPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKE 650
Cdd:cd04300   560 GPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKE 639
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 651 ASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKmIHEKSYDPWELYNNDQAIRKVVTQLINGFFS 730
Cdd:cd04300   640 ASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEA-LRKNGYYPADYYENDPRLKRVLDQIISGTFS 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 731 PENPDLFRVIYDSLLKTEgvpaDQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWE 810
Cdd:cd04300   719 PGDPDEFRPLVDSLLNGN----DEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAKDIWN 794

                  .
gi 1308682727 811 L 811
Cdd:cd04300   795 V 795
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
96-811 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1321.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  96 LDDLGLDLNTIEDNEPDAglgngglgrlAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGNPFEI 175
Cdd:pfam00343   1 LAELGLDLEELEEQEPDAglgngglgrlAACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 176 RRDEYGVEIKFGGNVRVVKgDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDYNKAV 255
Cdd:pfam00343  81 RRPEVAVEVKFGGRVEEYT-DGGRLRVRWVPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNAGDYIRAV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 256 EQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELMRVLM 335
Cdd:pfam00343 160 EEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKGGGDLDELPDKVAIQLNDTHPALAIPELMRILV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 336 DDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAIV--- 412
Cdd:pfam00343 240 DEEGLGWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSIIeeg 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 413 SDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWITD 492
Cdd:pfam00343 320 GDKQVRMAHLAIVGSHSVNGVAALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGWITD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 493 LSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRENP 572
Cdd:pfam00343 400 LDQLKKLEPFADDPAFLERWRAIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIKENP 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 573 DLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKEAS 652
Cdd:pfam00343 480 NADIVPRTFIFGGKAAPGYYMAKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEAS 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 653 GTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMiHEKSYDPWELYNNDQAIRKVVTQLINGFFSPE 732
Cdd:pfam00343 560 GTGNMKFMLNGALTIGTLDGANVEIREEVGEENIFIFGLTAEEVEAL-RAKGYNPRDYYESNPELKRVLDQIASGTFSPG 638
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1308682727 733 NPDLFRVIYDSLLKtegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWEL 811
Cdd:pfam00343 639 DPGLFRPLVDSLLN----GGDPYLVLADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
7-811 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1242.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727   7 TKEVFKEAVLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISL 86
Cdd:COG0058     4 NAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNLLNL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  87 GVNDIIKEVLDDLGLDLNTIEDNEPDAglgngglgrlAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEW 166
Cdd:COG0058    84 GLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERPDNW 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 167 LKNGNPFEIRRDEYGVEIKFGGnvrvvkgDNGRekyiqedYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSF 246
Cdd:COG0058   164 LRYGDPWELPRPEPAVEVKFGD-------EDGR-------TEDVLAVPYDVPIPGYRNNTVNTLRLWKAEASEEVGLYLF 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 247 DRGDYNKAVEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLT 326
Cdd:COG0058   230 DAGDYTDAVENKPEDRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTGGDLDGLPEPVVIHLNDTHPAFA 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 327 IPELMRVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVElVDKYGQDNERL 406
Cdd:COG0058   310 ILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEE-VRARPGDRERL 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 407 RRMAIVSDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIG 486
Cdd:COG0058   389 LRLGIIDEGQFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAELITEYIG 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 487 DEWITDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYN 566
Cdd:COG0058   469 DGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLHDIERYN 548
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 567 QLRENPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQIST 646
Cdd:COG0058   549 RILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADVWEQIPT 628
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 647 ASKEASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMihEKSYDPWELYNNDQAIRKVVTQLIN 726
Cdd:COG0058   629 AGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEAL--RAKYNPRDYYEADPELRRVLDQLAS 706
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 727 GFFSPEnPDLFRVIYDSLLktegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVN 806
Cdd:COG0058   707 GYFSPD-PEEFRALYDLLL-----GGDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYAE 780

                  ....*
gi 1308682727 807 EIWEL 811
Cdd:COG0058   781 RIWKL 785
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
15-811 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1203.63  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  15 VLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDIIKE 94
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  95 VLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGNPFE 174
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 175 IRRDEYGVEIKFGGNVrVVKGDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDYNKA 254
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRV-ELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEEFDLDAFNAGDYYEA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 255 VEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELMRVL 334
Cdd:TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFPKKVAIQLNDTHPALAIPELMRLL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 335 MDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAIVSD 414
Cdd:TIGR02093 320 IDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEE 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 415 GQ---IKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWIT 491
Cdd:TIGR02093 400 GQskrVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLT 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 492 DLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLREN 571
Cdd:TIGR02093 480 DLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKED 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 572 PDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKEA 651
Cdd:TIGR02093 560 PPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEA 639
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 652 SGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMiHEKSYDPWELYNNDQAIRKVVTQLINGFFSP 731
Cdd:TIGR02093 640 SGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEAL-REKGYNPREYYEADPELKRVLDLISSGTFSP 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 732 ENPDLFRVIYDSLLKtegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWEL 811
Cdd:TIGR02093 719 GDPGLFRPLYDSLLN----HGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794
PRK14985 PRK14985
maltodextrin phosphorylase; Provisional
66-810 0e+00

maltodextrin phosphorylase; Provisional


Pssm-ID: 237881 [Multi-domain]  Cd Length: 798  Bit Score: 840.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  66 VYYLSMEFLMGRALGNNIISLGVNDIIKEVLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRY 145
Cdd:PRK14985   61 VNYISMEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNY 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 146 RYGIFEQKIIDGYQFEKPDEWLKNGNPFEIRRDEYGVEIKFGGnvRVVKgDNGREKYIQEdyQSVRAVPYDIPIIGYNNN 225
Cdd:PRK14985  141 QYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGG--KVTK-QDGRERWEPA--FTITGEAWDLPVVGYRNG 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 226 TVNTLRIWDAEALQSFDLKSFDRGDYNKAvEQQNL-AKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNH 304
Cdd:PRK14985  216 VAQPLRLWQATHAHPFDLTKFNDGDFLRA-EQQGIdAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 305 PDIKDLPSKVIFHINDTHPSLTIPELMRVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIV 384
Cdd:PRK14985  295 RKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQII 374
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 385 EEINRRFcVELVDKYGQDNERL-RRMAIVSDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNG 463
Cdd:PRK14985  375 KEINTRF-KTLVEKTWPGDKKVwAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNG 453
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 464 ITQRRFLLHANPKLSEWLKRKIGDEWITDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDV 543
Cdd:PRK14985  454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 544 QVKRLHEYKRQLLNILHVMYLYNQLRENPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFI 623
Cdd:PRK14985  534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 624 ENFNVSNAEIIFAAADVSEQISTASKEASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEViKMIHEK 703
Cdd:PRK14985  614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQV-KALLAK 692
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 704 SYDPWELYNNDQAIRKVVTQLINGFFSPENPDLFRVIYDSLLKTegvpADQYFILKDFAAYARTQEKVDMAFRNQSQWAK 783
Cdd:PRK14985  693 GYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLKQG----GDPYLVLADFAAYVEAQKQVDALYRDQEAWTR 768
                         730       740
                  ....*....|....*....|....*..
gi 1308682727 784 MVMLNTASSGKFSSDRTIEEYVNEIWE 810
Cdd:PRK14985  769 AAILNTARCGMFSSDRSIRDYQARIWQ 795
 
Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
12-811 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1328.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  12 KEAVLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDI 91
Cdd:cd04300     1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  92 IKEVLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGN 171
Cdd:cd04300    81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 172 PFEIRRDEYGVEIKFGGNVRVVKgDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDY 251
Cdd:cd04300   161 PWEIRRPEVSVPVRFGGRVEEVP-DGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDY 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 252 NKAVEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELM 331
Cdd:cd04300   240 IRAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSEFPDKVAIQLNDTHPALAIPELM 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 332 RVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAI 411
Cdd:cd04300   320 RILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVDRIRRMSI 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 412 VSDG-QIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWI 490
Cdd:cd04300   400 IEEGkQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALITETIGDDWV 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 491 TDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRE 570
Cdd:cd04300   480 TDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHIIYLYLRIKE 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 571 NPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKE 650
Cdd:cd04300   560 GPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKE 639
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 651 ASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKmIHEKSYDPWELYNNDQAIRKVVTQLINGFFS 730
Cdd:cd04300   640 ASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEA-LRKNGYYPADYYENDPRLKRVLDQIISGTFS 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 731 PENPDLFRVIYDSLLKTEgvpaDQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWE 810
Cdd:cd04300   719 PGDPDEFRPLVDSLLNGN----DEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAKDIWN 794

                  .
gi 1308682727 811 L 811
Cdd:cd04300   795 V 795
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
96-811 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1321.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  96 LDDLGLDLNTIEDNEPDAglgngglgrlAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGNPFEI 175
Cdd:pfam00343   1 LAELGLDLEELEEQEPDAglgngglgrlAACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 176 RRDEYGVEIKFGGNVRVVKgDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDYNKAV 255
Cdd:pfam00343  81 RRPEVAVEVKFGGRVEEYT-DGGRLRVRWVPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNAGDYIRAV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 256 EQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELMRVLM 335
Cdd:pfam00343 160 EEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKGGGDLDELPDKVAIQLNDTHPALAIPELMRILV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 336 DDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAIV--- 412
Cdd:pfam00343 240 DEEGLGWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSIIeeg 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 413 SDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWITD 492
Cdd:pfam00343 320 GDKQVRMAHLAIVGSHSVNGVAALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGWITD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 493 LSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRENP 572
Cdd:pfam00343 400 LDQLKKLEPFADDPAFLERWRAIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIKENP 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 573 DLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKEAS 652
Cdd:pfam00343 480 NADIVPRTFIFGGKAAPGYYMAKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEAS 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 653 GTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMiHEKSYDPWELYNNDQAIRKVVTQLINGFFSPE 732
Cdd:pfam00343 560 GTGNMKFMLNGALTIGTLDGANVEIREEVGEENIFIFGLTAEEVEAL-RAKGYNPRDYYESNPELKRVLDQIASGTFSPG 638
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1308682727 733 NPDLFRVIYDSLLKtegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWEL 811
Cdd:pfam00343 639 DPGLFRPLVDSLLN----GGDPYLVLADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
7-811 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1242.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727   7 TKEVFKEAVLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISL 86
Cdd:COG0058     4 NAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNLLNL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  87 GVNDIIKEVLDDLGLDLNTIEDNEPDAglgngglgrlAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEW 166
Cdd:COG0058    84 GLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERPDNW 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 167 LKNGNPFEIRRDEYGVEIKFGGnvrvvkgDNGRekyiqedYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSF 246
Cdd:COG0058   164 LRYGDPWELPRPEPAVEVKFGD-------EDGR-------TEDVLAVPYDVPIPGYRNNTVNTLRLWKAEASEEVGLYLF 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 247 DRGDYNKAVEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLT 326
Cdd:COG0058   230 DAGDYTDAVENKPEDRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTGGDLDGLPEPVVIHLNDTHPAFA 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 327 IPELMRVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVElVDKYGQDNERL 406
Cdd:COG0058   310 ILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEE-VRARPGDRERL 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 407 RRMAIVSDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIG 486
Cdd:COG0058   389 LRLGIIDEGQFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAELITEYIG 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 487 DEWITDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYN 566
Cdd:COG0058   469 DGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLHDIERYN 548
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 567 QLRENPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQIST 646
Cdd:COG0058   549 RILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADVWEQIPT 628
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 647 ASKEASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMihEKSYDPWELYNNDQAIRKVVTQLIN 726
Cdd:COG0058   629 AGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEAL--RAKYNPRDYYEADPELRRVLDQLAS 706
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 727 GFFSPEnPDLFRVIYDSLLktegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVN 806
Cdd:COG0058   707 GYFSPD-PEEFRALYDLLL-----GGDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYAE 780

                  ....*
gi 1308682727 807 EIWEL 811
Cdd:COG0058   781 RIWKL 785
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
15-811 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1203.63  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  15 VLENIKIMFRKTIDQVSEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDIIKE 94
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  95 VLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGNPFE 174
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 175 IRRDEYGVEIKFGGNVrVVKGDNGREKYIQEDYQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDYNKA 254
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRV-ELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEEFDLDAFNAGDYYEA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 255 VEQQNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELMRVL 334
Cdd:TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFPKKVAIQLNDTHPALAIPELMRLL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 335 MDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAIVSD 414
Cdd:TIGR02093 320 IDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEE 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 415 GQ---IKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWIT 491
Cdd:TIGR02093 400 GQskrVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLT 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 492 DLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLREN 571
Cdd:TIGR02093 480 DLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKED 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 572 PDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKEA 651
Cdd:TIGR02093 560 PPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEA 639
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 652 SGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEVIKMiHEKSYDPWELYNNDQAIRKVVTQLINGFFSP 731
Cdd:TIGR02093 640 SGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEAL-REKGYNPREYYEADPELKRVLDLISSGTFSP 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 732 ENPDLFRVIYDSLLKtegvPADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWEL 811
Cdd:TIGR02093 719 GDPGLFRPLYDSLLN----HGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794
PRK14985 PRK14985
maltodextrin phosphorylase; Provisional
66-810 0e+00

maltodextrin phosphorylase; Provisional


Pssm-ID: 237881 [Multi-domain]  Cd Length: 798  Bit Score: 840.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  66 VYYLSMEFLMGRALGNNIISLGVNDIIKEVLDDLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRY 145
Cdd:PRK14985   61 VNYISMEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNY 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 146 RYGIFEQKIIDGYQFEKPDEWLKNGNPFEIRRDEYGVEIKFGGnvRVVKgDNGREKYIQEdyQSVRAVPYDIPIIGYNNN 225
Cdd:PRK14985  141 QYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGG--KVTK-QDGRERWEPA--FTITGEAWDLPVVGYRNG 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 226 TVNTLRIWDAEALQSFDLKSFDRGDYNKAvEQQNL-AKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNH 304
Cdd:PRK14985  216 VAQPLRLWQATHAHPFDLTKFNDGDFLRA-EQQGIdAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 305 PDIKDLPSKVIFHINDTHPSLTIPELMRVLMDDEGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIV 384
Cdd:PRK14985  295 RKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQII 374
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 385 EEINRRFcVELVDKYGQDNERL-RRMAIVSDGQIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNG 463
Cdd:PRK14985  375 KEINTRF-KTLVEKTWPGDKKVwAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNG 453
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 464 ITQRRFLLHANPKLSEWLKRKIGDEWITDLSKISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDV 543
Cdd:PRK14985  454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 544 QVKRLHEYKRQLLNILHVMYLYNQLRENPDLDMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFI 623
Cdd:PRK14985  534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 624 ENFNVSNAEIIFAAADVSEQISTASKEASGTGNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEViKMIHEK 703
Cdd:PRK14985  614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQV-KALLAK 692
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 704 SYDPWELYNNDQAIRKVVTQLINGFFSPENPDLFRVIYDSLLKTegvpADQYFILKDFAAYARTQEKVDMAFRNQSQWAK 783
Cdd:PRK14985  693 GYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLKQG----GDPYLVLADFAAYVEAQKQVDALYRDQEAWTR 768
                         730       740
                  ....*....|....*....|....*..
gi 1308682727 784 MVMLNTASSGKFSSDRTIEEYVNEIWE 810
Cdd:PRK14985  769 AAILNTARCGMFSSDRSIRDYQARIWQ 795
PRK14986 PRK14986
glycogen phosphorylase; Provisional
20-816 0e+00

glycogen phosphorylase; Provisional


Pssm-ID: 184948 [Multi-domain]  Cd Length: 815  Bit Score: 808.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  20 KIMFRKTIDQV--SEEHIFQAVAYAVRDIIVDEWIETHKTYEEKDAKTVYYLSMEFLMGRALGNNIISLGVNDIIKEVLD 97
Cdd:PRK14986   24 KLMFTIGKDPViaNKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVQGALE 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727  98 DLGLDLNTIEDNEPDAGLGNGGLGRLAACFLDSLATLEYPAYGCGIRYRYGIFEQKIIDGYQFEKPDEWLKNGNPFEIRR 177
Cdd:PRK14986  104 AMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKR 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 178 DEYGVEIKFGGNVrvvKGDNGREKYIQEdyQSVRAVPYDIPIIGYNNNTVNTLRIWDAEALQSFDLKSFDRGDYNKAVEQ 257
Cdd:PRK14986  184 HNTRYKVRFGGRI---QQEGKKTRWIET--EEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVED 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 258 QNLAKTIVEVLYPNDNHYQGKELRLKQQYFFISATIQQVVKKFKQNHPDIKDLPSKVIFHINDTHPSLTIPELMRVLMDD 337
Cdd:PRK14986  259 KNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRLLIDE 338
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 338 EGLEWGAAWAIVKKTCAYTNHTIMSEALEKWPIELFSRLLPRIYQIVEEINRRFCVELVDKYGQDNERLRRMAIV--SDG 415
Cdd:PRK14986  339 HKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIdeSNG 418
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 416 -QIKMAWLCIVGSFSVNGVARLHTEILKNEELKDFYEIYPKKFNNKTNGITQRRFLLHANPKLSEWLKRKIGDEWITDLS 494
Cdd:PRK14986  419 rRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLS 498
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 495 KISKLKEFVDDSQAQKDFMHIKYENKVRLAEYIKKHNGIEVDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQLRENPDL 574
Cdd:PRK14986  499 QLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDA 578
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 575 DMMPRTFIFGAKSAPGYERAKLIIKLINNVANVINHDLSINNKIKVVFIENFNVSNAEIIFAAADVSEQISTASKEASGT 654
Cdd:PRK14986  579 KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGT 658
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 655 GNMKLMLNGAATIGTLDGANIEIAEEVGMDNCFIFGLTSDEViKMIHEKSYDPWELYNNDQAIRKVVTQLINGFFSPENP 734
Cdd:PRK14986  659 SNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEV-EALRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEEP 737
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 735 DLFRVIYDSLLKTegvpADQYFILKDFAAYARTQEKVDMAFRNQSQWAKMVMLNTASSGKFSSDRTIEEYVNEIWELEKT 814
Cdd:PRK14986  738 GRYRDLVDSLINF----GDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPV 813

                  ..
gi 1308682727 815 KV 816
Cdd:PRK14986  814 RL 815
GT35_Glycogen_Phosphorylase-like cd04299
proteins similar to glycogen phosphorylase; This family is most closely related to the ...
128-672 1.94e-17

proteins similar to glycogen phosphorylase; This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.


Pssm-ID: 340852 [Multi-domain]  Cd Length: 776  Bit Score: 87.02  E-value: 1.94e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 128 LDSLATLEYPAYGCGIRYRYGIFEQKI-IDGYQFEKPDEWLKNGNPFEIRRDEYG----VEIKFGGN---VRVVKGDNGR 199
Cdd:cd04299   115 LKSASDLGVPLVGVGLLYRHGYFRQSLdSDGWQQELYPELDPGQLPLEPVRDANGepvrVTVELPDRrvhARVWRAQVGR 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 200 EKYIQEDyqsvravpydipiigyNNNTVNTlriwdaealqsfdlkSFDRGdynkaveqqnlaktIVEVLYPNDnhyqgKE 279
Cdd:cd04299   195 VPLYLLD----------------TDVEENS---------------EDDRK--------------ITDRLYGGD-----QE 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 280 LRLKQQ--------YFFISATIQqvvkkfkqnhPDIkdlpskviFHINDTHPSLTIPELMRVLMDdEGLEWGAAWAIVKK 351
Cdd:cd04299   225 LRIQQEillgiggiRALRALGIK----------PDV--------FHLNEGHAAFLGLERIRELVA-EGLDFDEALELVRA 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 352 TCAYTNHTIMSEALEKWPIELFSRLLPRIYQiveeinrrfcvelvdKYGQDNERL----RRMAIVSDGQIKMAWLCIVGS 427
Cdd:cd04299   286 STLFTTHTPVPAGIDRFPPDLVDRYLGGYPE---------------LLGLSRDEFlalgREDPPDPGEPFNMAVLALRLS 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 428 FSVNGVARLHTEILKNEelkdFYEIYPKKFNNK------TNGITQRRFLlhaNPKLSEWLKRKIGDEWI--TDLSKISKL 499
Cdd:cd04299   351 QRANGVSKLHGEVSREM----FSNLWPGYPPEEvpighvTNGVHTPTWV---SPEMRELYDRYLGREWRerPTLEDIWEA 423
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 500 KEFVDDSqaqkDFMHIKYENKVRLAEYIK--------KHNGIEVDPRSI---FDVQV------KRLHEYKRqllniLHVM 562
Cdd:cd04299   424 VDQIPDE----ELWEVRNTLRKRLVEFVRerlreqwlRNGAGPAEIAELdnaLDPNVltigfaRRFATYKR-----ATLL 494
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308682727 563 YL----YNQLRENPDldmMPRTFIFGAKSAPGYERAKLIIKLINNVANvinhDLSINNKIkvVFIENFNVSNAEIIFAAA 638
Cdd:cd04299   495 LRdperLARILNNPE---RPVQFVFAGKAHPHDEGGKALIREIVRFSR----EPDFRGRI--IFLEDYDMQLARHLVQGV 565
                         570       580       590
                  ....*....|....*....|....*....|....
gi 1308682727 639 DVSEQISTASKEASGTGNMKLMLNGAATIGTLDG 672
Cdd:cd04299   566 DVWLNNPRRPLEASGTSGMKAALNGGLNLSVLDG 599
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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