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Conserved domains on  [gi|1347339820|gb|PPQ43322|]
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DUF1674 domain-containing protein [Rhodopseudomonas palustris]

Protein Classification

DUF1674 domain-containing protein( domain architecture ID 11475613)

uncharacterized DUF1674 domain-containing protein similar to eukaryotic succinate dehydrogenase (SDH) assembly factor 4, which is essential in the assembly of SDH, a component of the tricarboxylic acid cycle and the mitochondrial electron transport chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
12-72 2.13e-20

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


:

Pssm-ID: 444259  Cd Length: 61  Bit Score: 75.75  E-value: 2.13e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1347339820 12 DAASPRKDLPEAAKRALAEAEARRvEAAKHAEARAKEVQGPKGPEPTRYGDWEVKGIASDF 72
Cdd:COG5508    2 NTPAPAKPLPPAAQRALAEAEARR-AAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
12-72 2.13e-20

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 75.75  E-value: 2.13e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1347339820 12 DAASPRKDLPEAAKRALAEAEARRvEAAKHAEARAKEVQGPKGPEPTRYGDWEVKGIASDF 72
Cdd:COG5508    2 NTPAPAKPLPPAAQRALAEAEARR-AAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 30-72 3.31e-13

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 57.33  E-value: 3.31e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 1347339820 30 EAEARRVEAAKHAEARAK-------EVQGPKGPEPTRYGDWEVKGIASDF 72
Cdd:pfam07896  1 EAEERPAAAAKPAPEFEGdvnpktgEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
12-72 2.13e-20

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 75.75  E-value: 2.13e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1347339820 12 DAASPRKDLPEAAKRALAEAEARRvEAAKHAEARAKEVQGPKGPEPTRYGDWEVKGIASDF 72
Cdd:COG5508    2 NTPAPAKPLPPAAQRALAEAEARR-AAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 30-72 3.31e-13

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 57.33  E-value: 3.31e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 1347339820 30 EAEARRVEAAKHAEARAK-------EVQGPKGPEPTRYGDWEVKGIASDF 72
Cdd:pfam07896  1 EAEERPAAAAKPAPEFEGdvnpktgEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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