NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|3122965|sp|Q16762|]
View 

RecName: Full=Thiosulfate sulfurtransferase; AltName: Full=Rhodanese

Protein Classification

sulfurtransferase( domain architecture ID 11458420)

sulfurtransferase such as thiosulfate sulfurtransferase or 3-mercaptopyruvate sulfurtransferase, which catalyzes the transfer of sulfur to cyanide from donor compounds such as thiosulfate or 3-mercaptopyruvate

CATH:  3.40.250.10
EC:  2.8.1.-
Gene Ontology:  GO:0016783|GO:0000098
PubMed:  12151332|17454295

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
SseA COG2897
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion ...
27-279 5.89e-112

3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism];


:

Pssm-ID: 442142 [Multi-domain]  Cd Length: 262  Bit Score: 324.05  E-value: 5.89e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   27 PGLRVLDASWYSPGtreARKEYLERHVPGASFFDIEEC-RDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEhlG 105
Cdd:COG2897   8 PDVVILDVRWDLPD---GRAAYEAGHIPGAVFLDLDTDlSDPRSPGRHPLPSPEAFAALLGALGISNDTTVVVYDDG--G 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  106 SFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQ 185
Cdd:COG2897  83 GLFAARAWWLLRYAGHEDVRVLDGGLAAWKAAGLPLETGPPTPAPGDFTARPDPELLADADEVLAALGDPDAVLVDARSP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  186 GRFLGTEPEPDAVGldsGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCG 265
Cdd:COG2897 163 ERYRGEVEPIDPRA---GHIPGAVNLPWTDLLDEDGTFKSAEELRALFAALGIDPDKPVITYCGSGVRAAHTWLALELLG 239
                       250
                ....*....|....
gi 3122965  266 KPDVAVYDGSWSEW 279
Cdd:COG2897 240 YPNVRLYDGSWSEW 253
 
Name Accession Description Interval E-value
SseA COG2897
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion ...
27-279 5.89e-112

3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism];


Pssm-ID: 442142 [Multi-domain]  Cd Length: 262  Bit Score: 324.05  E-value: 5.89e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   27 PGLRVLDASWYSPGtreARKEYLERHVPGASFFDIEEC-RDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEhlG 105
Cdd:COG2897   8 PDVVILDVRWDLPD---GRAAYEAGHIPGAVFLDLDTDlSDPRSPGRHPLPSPEAFAALLGALGISNDTTVVVYDDG--G 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  106 SFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQ 185
Cdd:COG2897  83 GLFAARAWWLLRYAGHEDVRVLDGGLAAWKAAGLPLETGPPTPAPGDFTARPDPELLADADEVLAALGDPDAVLVDARSP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  186 GRFLGTEPEPDAVGldsGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCG 265
Cdd:COG2897 163 ERYRGEVEPIDPRA---GHIPGAVNLPWTDLLDEDGTFKSAEELRALFAALGIDPDKPVITYCGSGVRAAHTWLALELLG 239
                       250
                ....*....|....
gi 3122965  266 KPDVAVYDGSWSEW 279
Cdd:COG2897 240 YPNVRLYDGSWSEW 253
PLN02723 PLN02723
3-mercaptopyruvate sulfurtransferase
9-279 2.22e-88

3-mercaptopyruvate sulfurtransferase


Pssm-ID: 178324 [Multi-domain]  Cd Length: 320  Bit Score: 266.28  E-value: 2.22e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965     9 ALVSTKWLAESIRTgklgPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDTASPYEMMLPSEAGFAEYVGR 87
Cdd:PLN02723  22 PVVSVDWLHANLRE----PDVKVLDASWYMPDeQRNPIQEYQVAHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSA 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    88 LGISNHTHVVVYDGEhlGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPE------------------ 149
Cdd:PLN02723  98 LGIENKDGVVVYDGK--GIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAilkasaaseaiekvyqgq 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   150 ---PAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQGRFLGTEPEPDAvGLDSGHIRGAVNMPFMDFLTEDGFEKGP 226
Cdd:PLN02723 176 tvsPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRK-GIRSGHIPGSKCVPFPQMLDSSQTLLPA 254
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 3122965   227 EELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:PLN02723 255 EELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVYDGSWTEW 307
TST_Repeats cd01445
Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only ...
11-136 6.82e-64

Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.


Pssm-ID: 238722 [Multi-domain]  Cd Length: 138  Bit Score: 197.71  E-value: 6.82e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   11 VSTKWLAESIRTGKLGPGLRVLDASWYSPGTREARKEYLE------------RHVPGASFFDIEECRDTASPYEMMLPSE 78
Cdd:cd01445   1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLEtqpepdavgldsGHIPGASFFDFEECLDEAGFEESMEPSE 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 3122965   79 AGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLK 136
Cdd:cd01445  81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWFH 138
RHOD smart00450
Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The ...
173-285 6.69e-19

Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.


Pssm-ID: 197731 [Multi-domain]  Cd Length: 100  Bit Score: 79.81  E-value: 6.69e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965     173 ESKRFQLVDSRSQGRFLGtepepdavgldsGHIRGAVNMPFMDFLTEDGfEKGPEELRALFQTKKVDLSQPLIATCRKGV 252
Cdd:smart00450   1 NDEKVVLLDVRSPEEYEG------------GHIPGAVNIPLSELLDRRG-ELDILEFEELLKRLGLDKDKPVVVYCRSGN 67
                           90       100       110
                   ....*....|....*....|....*....|...
gi 3122965     253 TACHVALAAYLCGKPDVAVYDGSWSEWFRRAPP 285
Cdd:smart00450  68 RSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100
Rhodanese pfam00581
Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single ...
172-279 1.32e-14

Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases.


Pssm-ID: 425764 [Multi-domain]  Cd Length: 92  Bit Score: 67.89  E-value: 1.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    172 LESKRFQLVDSRSQGRFlgtepepdavglDSGHIRGAVNMPFMDF-LTEDGFEKGPEELRALFQTKKVdlsqplIATCRK 250
Cdd:pfam00581   1 LEDGKVVLIDVRPPEEY------------AKGHIPGAVNVPLSSLsLPPLPLLELLEKLLELLKDKPI------VVYCNS 62
                          90       100
                  ....*....|....*....|....*....
gi 3122965    251 GVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:pfam00581  63 GNRAAAAAALLKALGYKNVYVLDGGFEAW 91
 
Name Accession Description Interval E-value
SseA COG2897
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion ...
27-279 5.89e-112

3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism];


Pssm-ID: 442142 [Multi-domain]  Cd Length: 262  Bit Score: 324.05  E-value: 5.89e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   27 PGLRVLDASWYSPGtreARKEYLERHVPGASFFDIEEC-RDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEhlG 105
Cdd:COG2897   8 PDVVILDVRWDLPD---GRAAYEAGHIPGAVFLDLDTDlSDPRSPGRHPLPSPEAFAALLGALGISNDTTVVVYDDG--G 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  106 SFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQ 185
Cdd:COG2897  83 GLFAARAWWLLRYAGHEDVRVLDGGLAAWKAAGLPLETGPPTPAPGDFTARPDPELLADADEVLAALGDPDAVLVDARSP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  186 GRFLGTEPEPDAVGldsGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCG 265
Cdd:COG2897 163 ERYRGEVEPIDPRA---GHIPGAVNLPWTDLLDEDGTFKSAEELRALFAALGIDPDKPVITYCGSGVRAAHTWLALELLG 239
                       250
                ....*....|....
gi 3122965  266 KPDVAVYDGSWSEW 279
Cdd:COG2897 240 YPNVRLYDGSWSEW 253
PLN02723 PLN02723
3-mercaptopyruvate sulfurtransferase
9-279 2.22e-88

3-mercaptopyruvate sulfurtransferase


Pssm-ID: 178324 [Multi-domain]  Cd Length: 320  Bit Score: 266.28  E-value: 2.22e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965     9 ALVSTKWLAESIRTgklgPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDTASPYEMMLPSEAGFAEYVGR 87
Cdd:PLN02723  22 PVVSVDWLHANLRE----PDVKVLDASWYMPDeQRNPIQEYQVAHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSA 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    88 LGISNHTHVVVYDGEhlGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPE------------------ 149
Cdd:PLN02723  98 LGIENKDGVVVYDGK--GIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAilkasaaseaiekvyqgq 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   150 ---PAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQGRFLGTEPEPDAvGLDSGHIRGAVNMPFMDFLTEDGFEKGP 226
Cdd:PLN02723 176 tvsPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRK-GIRSGHIPGSKCVPFPQMLDSSQTLLPA 254
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 3122965   227 EELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:PLN02723 255 EELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVYDGSWTEW 307
sseA PRK11493
3-mercaptopyruvate sulfurtransferase; Provisional
11-283 2.51e-78

3-mercaptopyruvate sulfurtransferase; Provisional


Pssm-ID: 236917 [Multi-domain]  Cd Length: 281  Bit Score: 239.61  E-value: 2.51e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    11 VSTKWLAESIRTgklgPGLRVLDASWYSPG--TREARKEYLERHVPGASFFDIEECRDTASPYEMMLPSEAGFAEYVGRL 88
Cdd:PRK11493   7 VAADWLAEHIDD----PEIQIIDARMAPPGqeDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMREL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    89 GISNHTHVVVYDGEHLgsFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQV 168
Cdd:PRK11493  83 GVNQDKHLVVYDEGNL--FSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVRLTDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   169 LENLESKRFQLVDSRSQGRFLGT--EPEPdavGLDSGHIRGAVNMPFMDfLTEDGFEKGPEELRALFQTKKVDLSQPLIA 246
Cdd:PRK11493 161 LLASHEKTAQIVDARPAARFNAEvdEPRP---GLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFFGRGVSFDRPIIA 236
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 3122965   247 TCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRA 283
Cdd:PRK11493 237 SCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARA 273
TST_Repeats cd01445
Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only ...
11-136 6.82e-64

Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.


Pssm-ID: 238722 [Multi-domain]  Cd Length: 138  Bit Score: 197.71  E-value: 6.82e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   11 VSTKWLAESIRTGKLGPGLRVLDASWYSPGTREARKEYLE------------RHVPGASFFDIEECRDTASPYEMMLPSE 78
Cdd:cd01445   1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLEtqpepdavgldsGHIPGASFFDFEECLDEAGFEESMEPSE 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 3122965   79 AGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLK 136
Cdd:cd01445  81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWFH 138
TST_Repeat_1 cd01448
Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the ...
10-138 1.23e-55

Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.


Pssm-ID: 238725 [Multi-domain]  Cd Length: 122  Bit Score: 175.89  E-value: 1.23e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   10 LVSTKWLAESIRTgklgPGLRVLDASWYSPGtREARKEYLERHVPGASFFDIEECRDTASPYEMMLPSEAGFAEYVGRLG 89
Cdd:cd01448   1 LVSPDWLAEHLDD----PDVRILDARWYLPD-RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLG 75
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 3122965   90 ISNHTHVVVYDGEhlGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEG 138
Cdd:cd01448  76 ISNDDTVVVYDDG--GGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG 122
TST_Repeat_2 cd01449
Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of ...
163-281 1.45e-54

Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.


Pssm-ID: 238726 [Multi-domain]  Cd Length: 118  Bit Score: 172.82  E-value: 1.45e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  163 KTYEQVLENLESKRFQLVDSRSQGRFLGTEPEPDAvGLDSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQ 242
Cdd:cd01449   1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRP-GLRSGHIPGAVNIPWTSLLDEDGTFKSPEELRALFAALGITPDK 79
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 3122965  243 PLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFR 281
Cdd:cd01449  80 PVIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS 118
TST_Repeats cd01445
Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only ...
163-281 2.95e-49

Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.


Pssm-ID: 238722 [Multi-domain]  Cd Length: 138  Bit Score: 160.34  E-value: 2.95e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  163 KTYEQVLENLE----SKRFQLVDSRSQ--------GRFLGTEPEPDAVGLDSGHIRGAVNMPFMDFLTEDGFEKGPE--- 227
Cdd:cd01445   1 KSTEQLAENLEagkvGKGFQLLDARAQspgtrearGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEpse 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 3122965  228 -ELRALFQTKKVDLSQPLIATCRK---GVTACHVALAAYLCGKPDVAVYDGSWSEWFR 281
Cdd:cd01445  81 aEFAAMFEAKGIDLDKHLIATDGDdlgGFTACHIALAARLCGHPDVAILDGGFFEWFH 138
RHOD smart00450
Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The ...
173-285 6.69e-19

Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.


Pssm-ID: 197731 [Multi-domain]  Cd Length: 100  Bit Score: 79.81  E-value: 6.69e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965     173 ESKRFQLVDSRSQGRFLGtepepdavgldsGHIRGAVNMPFMDFLTEDGfEKGPEELRALFQTKKVDLSQPLIATCRKGV 252
Cdd:smart00450   1 NDEKVVLLDVRSPEEYEG------------GHIPGAVNIPLSELLDRRG-ELDILEFEELLKRLGLDKDKPVVVYCRSGN 67
                           90       100       110
                   ....*....|....*....|....*....|...
gi 3122965     253 TACHVALAAYLCGKPDVAVYDGSWSEWFRRAPP 285
Cdd:smart00450  68 RSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100
RHOD smart00450
Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The ...
26-140 7.28e-17

Rhodanese Homology Domain; An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.


Pssm-ID: 197731 [Multi-domain]  Cd Length: 100  Bit Score: 74.42  E-value: 7.28e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965      26 GPGLRVLDASWyspgtreaRKEYLERHVPGASFFDIEECRDTASPYEMMLpseagFAEYVGRLGISNHTHVVVYDGehlG 105
Cdd:smart00450   2 DEKVVLLDVRS--------PEEYEGGHIPGAVNIPLSELLDRRGELDILE-----FEELLKRLGLDKDKPVVVYCR---S 65
                           90       100       110
                   ....*....|....*....|....*....|....*
gi 3122965     106 SFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHP 140
Cdd:smart00450  66 GNRSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100
PRK09629 PRK09629
bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
41-279 4.54e-16

bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional


Pssm-ID: 104071 [Multi-domain]  Cd Length: 610  Bit Score: 78.24  E-value: 4.54e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    41 TREARkeYLERHVPGASFFDIEECRDTASPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEhlGSFYAPRVWWMFRVFG 120
Cdd:PRK09629  31 TSSAR--YEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELGHNPDAVYVVYDDE--GGGWAGRFIWLLDVIG 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   121 HRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLESKRFQLVDSRSQGRFLGTEpepdAVGL 200
Cdd:PRK09629 107 HSGYHYLDGGVLAWEAQALPLSTDVPPVAGGPVTLTLHDEPTATREYLQSRLGAADLAIWDARAPTEYSGEK----VVAA 182
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 3122965   201 DSGHIRGAVNMPFMDFLTEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:PRK09629 183 KGGHIPGAVNFEWTAGMDKARNLRIRQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRVKAYAGSWGEW 261
Rhodanese pfam00581
Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single ...
172-279 1.32e-14

Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases.


Pssm-ID: 425764 [Multi-domain]  Cd Length: 92  Bit Score: 67.89  E-value: 1.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965    172 LESKRFQLVDSRSQGRFlgtepepdavglDSGHIRGAVNMPFMDF-LTEDGFEKGPEELRALFQTKKVdlsqplIATCRK 250
Cdd:pfam00581   1 LEDGKVVLIDVRPPEEY------------AKGHIPGAVNVPLSSLsLPPLPLLELLEKLLELLKDKPI------VVYCNS 62
                          90       100
                  ....*....|....*....|....*....
gi 3122965    251 GVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:pfam00581  63 GNRAAAAAALLKALGYKNVYVLDGGFEAW 91
Rhodanese pfam00581
Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single ...
47-134 6.35e-10

Rhodanese-like domain; Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases.


Pssm-ID: 425764 [Multi-domain]  Cd Length: 92  Bit Score: 55.18  E-value: 6.35e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965     47 EYLERHVPGASFFdieecrdtasPYEMMLPSEAGFAEYVGRL-GISNHTHVVVYDGEHLGSfyaPRVWWMFRVFGHRTVS 125
Cdd:pfam00581  16 EYAKGHIPGAVNV----------PLSSLSLPPLPLLELLEKLlELLKDKPIVVYCNSGNRA---AAAAALLKALGYKNVY 82

                  ....*....
gi 3122965    126 VLNGGFRNW 134
Cdd:pfam00581  83 VLDGGFEAW 91
RHOD cd00158
Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese ...
167-279 1.15e-09

Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.


Pssm-ID: 238089 [Multi-domain]  Cd Length: 89  Bit Score: 54.23  E-value: 1.15e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  167 QVLENLESKRFQLVDSRSQGRFlgtepepdavglDSGHIRGAVNMPFMDFLTEDGFEKGPEElralfqtkkvdlsQPLIA 246
Cdd:cd00158   1 ELKELLDDEDAVLLDVREPEEY------------AAGHIPGAINIPLSELEERAALLELDKD-------------KPIVV 55
                        90       100       110
                ....*....|....*....|....*....|...
gi 3122965  247 TCRKGVTACHVALAAYLCGKPDVAVYDGSWSEW 279
Cdd:cd00158  56 YCRSGNRSARAAKLLRKAGGTNVYNLEGGMLAW 88
PspE COG0607
Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; ...
164-285 3.16e-09

Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Rhodanese-related sulfurtransferase is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440372 [Multi-domain]  Cd Length: 106  Bit Score: 53.43  E-value: 3.16e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  164 TYEQVLENLESKRFQLVDSRSQGRFlgtepepdavglDSGHIRGAVNMPFMDFltedgfekgPEELRALfqtkkvDLSQP 243
Cdd:COG0607   7 SPAELAELLESEDAVLLDVREPEEF------------AAGHIPGAINIPLGEL---------AERLDEL------PKDKP 59
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 3122965  244 LIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPP 285
Cdd:COG0607  60 IVVYCASGGRSAQAAALLRRAGYTNVYNLAGGIEAWKAAGLP 101
RHOD_HSP67B2 cd01519
Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein ...
191-279 3.43e-09

Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.


Pssm-ID: 238777 [Multi-domain]  Cd Length: 106  Bit Score: 53.43  E-value: 3.43e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  191 TEPEPDAVGLD--------SGHIRGAVNMPFMDFltEDGFEKGPEELRALFQTKKVDLSQPLIATCRKGV---TACHVAL 259
Cdd:cd01519  10 PNPHPNKVLIDvrepeelkTGKIPGAINIPLSSL--PDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVrskAAAELAR 87
                        90       100
                ....*....|....*....|
gi 3122965  260 AAylcGKPDVAVYDGSWSEW 279
Cdd:cd01519  88 SL---GYENVGNYPGSWLDW 104
TST_Repeat_1 cd01448
Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the ...
162-279 1.18e-03

Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.


Pssm-ID: 238725 [Multi-domain]  Cd Length: 122  Bit Score: 37.98  E-value: 1.18e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965  162 LKTYEQVLENLESKRFQLVDSRSqgrflgTEPEPDAVGL-DSGHIRGAVNMPFMDFLTEDGFEKG----PEELRALFQTK 236
Cdd:cd01448   1 LVSPDWLAEHLDDPDVRILDARW------YLPDRDGRKEyLEGHIPGAVFFDLDEDLDDKSPGPHmlpsPEEFAELLGSL 74
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 3122965  237 KVDLSQPLIATCRKGVTAchvalAAYL------CGKPDVAVYDGSWSEW 279
Cdd:cd01448  75 GISNDDTVVVYDDGGGFF-----AARAwwtlryFGHENVRVLDGGLQAW 118
RHOD cd00158
Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese ...
26-134 5.66e-03

Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.


Pssm-ID: 238089 [Multi-domain]  Cd Length: 89  Bit Score: 35.35  E-value: 5.66e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3122965   26 GPGLRVLDAswyspgtREArKEYLERHVPGASFFDIEEcrdtaspyemmLPSEAGFAEyvgrlgISNHTHVVVYDGehlG 105
Cdd:cd00158   8 DEDAVLLDV-------REP-EEYAAGHIPGAINIPLSE-----------LEERAALLE------LDKDKPIVVYCR---S 59
                        90       100
                ....*....|....*....|....*....
gi 3122965  106 SFYAPRVWWMFRVFGHRTVSVLNGGFRNW 134
Cdd:cd00158  60 GNRSARAAKLLRKAGGTNVYNLEGGMLAW 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH