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Conserved domains on  [gi|296439457|sp|Q6Q4G3|]
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RecName: Full=Aminopeptidase Q; Short=AP-Q; Short=APQ; AltName: Full=CHL2 antigen; AltName: Full=Laeverin

Protein Classification

M1 family metallopeptidase( domain architecture ID 10176184)

M1 family metallopeptidase containing an ERAP1-like C-terminal domain with HEAT-like repeats is a zinc-dependent metallopeptidase with an HEXXH motif as part of its active site, similar to aminopeptidase N, a broad specificity aminopeptidase, and glutamyl aminopeptidase, which releases N-terminal glutamate from a peptide

EC:  3.4.11.-
Gene Ontology:  GO:0008237|GO:0008270|GO:0006508
MEROPS:  M1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
105-572 1.67e-180

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


:

Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 531.00  E-value: 1.67e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 105 LHYDLELWPQLRpdelpagSLPFTGRVNITVRCTVATSRLLLHSLFQDCERAEVRGPLSPGTGNATVGRVPvddvwfalD 184
Cdd:cd09601    1 LHYDLTLTPDLE-------NFTFSGSVTITLEVLEPTDTIVLHAKDLTITSASLTLKGGSGIIEVTVVTDE--------E 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 185 TEYMVLELSEPLKPGSSYELQLSFSGLVKEDLReGLFLNVYTD-QGERRALLASQLEPTFARYVFPCFDEPALKATFNIT 263
Cdd:cd09601   66 TEFLTITLDETLPPGENYTLSIEFTGKLNDDLR-GFYRSSYTDeDGETRYLAATQFEPTDARRAFPCFDEPAFKATFDIT 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 264 MIHHPSYVALSNMPKLgqseKEDVNGSKWTVTTFSTTPHMPTYLVAFVICDYDHV-NRTERGKEIRIWARKDAIanGSAD 342
Cdd:cd09601  145 ITHPKGYTALSNMPPV----ESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIeSTTKSGVPVRVYARPGKI--EQGD 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 343 FALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWF 422
Cdd:cd09601  219 FALEVAPKILDFYEDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASDKQRVAEVIAHELAHQWF 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 423 GNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFDIFT 502
Cdd:cd09601  299 GNLVTMKWWDDLWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVES--PSEISEIFDAIS 376
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 503 YSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQSTVilpaTIKNIMDSWTH 572
Cdd:cd09601  377 YSKGASVLRMLENFLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPL----DVKEIMDSWTL 442
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
647-970 1.25e-67

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


:

Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 229.08  E-value: 1.25e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  647 WVILNLNMTGYYRVNYDKLGWKKLNQQLEkdPKAIPVIHRLQLIDDAFSLSKNNYIEIETALELTKYLAEEDEIIVWHTV 726
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQLL--SKVLSPLDRAGLIDDAFALARAGELSTSDALDLVLAYLNETDYVVWSAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  727 LVNLVTrdlvsevnIYDIYSLLKRYLLKRlNLIWNIYSTIIRE--NVLALQDDYLALISLEKLFVTACWLGLEDCLQLSK 804
Cdd:pfam11838  79 LSQLST--------LRSLLSADPEYEALK-AFLRKLLSPLAEKlgWEAPPGESHLDRQLRALLLSAACSAGDPECVAEAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  805 ELFAKWVDHPENeIPYPIKDVVLCYGIALGSDKEWDILLNTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAISTSPF 884
Cdd:pfam11838 150 KLFDAWLDGDDA-IPPDLRWAVYCAAVANGGEAEWDALLERYRDTTSPSEKERALRALAATPDPELLQRALELALDSDEV 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  885 TSNE-TNIIEVVASSEVGRYVAKDFLVNNWQAVSKRYGTQSLI-NLIYTIGRTVTTDLQIVELQQFFSNMLEEHQRIRVH 962
Cdd:pfam11838 229 RNQDlRAVIAGLASNPAGRDLAWDFVKENWDALVKRLGGGSSLgRLVKGLTPSFSTEEELDEVEAFFADKDTPGLRRALA 308

                  ....*...
gi 296439457  963 ANLQTIKN 970
Cdd:pfam11838 309 QALETIRR 316
 
Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
105-572 1.67e-180

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 531.00  E-value: 1.67e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 105 LHYDLELWPQLRpdelpagSLPFTGRVNITVRCTVATSRLLLHSLFQDCERAEVRGPLSPGTGNATVGRVPvddvwfalD 184
Cdd:cd09601    1 LHYDLTLTPDLE-------NFTFSGSVTITLEVLEPTDTIVLHAKDLTITSASLTLKGGSGIIEVTVVTDE--------E 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 185 TEYMVLELSEPLKPGSSYELQLSFSGLVKEDLReGLFLNVYTD-QGERRALLASQLEPTFARYVFPCFDEPALKATFNIT 263
Cdd:cd09601   66 TEFLTITLDETLPPGENYTLSIEFTGKLNDDLR-GFYRSSYTDeDGETRYLAATQFEPTDARRAFPCFDEPAFKATFDIT 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 264 MIHHPSYVALSNMPKLgqseKEDVNGSKWTVTTFSTTPHMPTYLVAFVICDYDHV-NRTERGKEIRIWARKDAIanGSAD 342
Cdd:cd09601  145 ITHPKGYTALSNMPPV----ESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIeSTTKSGVPVRVYARPGKI--EQGD 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 343 FALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWF 422
Cdd:cd09601  219 FALEVAPKILDFYEDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASDKQRVAEVIAHELAHQWF 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 423 GNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFDIFT 502
Cdd:cd09601  299 GNLVTMKWWDDLWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVES--PSEISEIFDAIS 376
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 503 YSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQSTVilpaTIKNIMDSWTH 572
Cdd:cd09601  377 YSKGASVLRMLENFLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPL----DVKEIMDSWTL 442
PepN COG0308
Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];
97-593 1.43e-98

Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];


Pssm-ID: 440077 [Multi-domain]  Cd Length: 609  Bit Score: 323.13  E-value: 1.43e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  97 RLPPWLVPLHYDLELwpqlrpdELPAGSLPFTGRVNITVRCTVATsrllLHSLFQDCERAEVRgplspgtgNATVGRVPV 176
Cdd:COG0308   10 YRPPGYDVTHYDLDL-------DLDPATTRLSGTATITFTATEAP----LDSLVLDLKGLEVT--------SVTVDGKPL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 177 DdvwFALDTEYMVLELSEPLKPGSSYELQLSFSGLVKEDLrEGLFLNVYTDQGERraLLASQLEPTFARYVFPCFDEPAL 256
Cdd:COG0308   71 D---FTRDGERLTITLPKPLAPGETFTLEIEYSGKPSNGG-EGLYRSGDPPDGPP--YLYTQCEPEGARRWFPCFDHPDD 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 257 KATFNITMIHHPSYVALSNMPKLGQSEKEDvngsKWTVTTFSTTPHMPTYLVAFVICDYDHVNRT-ERGKEIRIWARKDA 335
Cdd:COG0308  145 KATFTLTVTVPAGWVAVSNGNLVSETELGD----GRTTWHWADTQPIPTYLFALAAGDYAVVEDTfASGVPLRVYVRPGL 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 336 IANgsADFALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKtlISYVVSH 415
Cdd:COG0308  221 ADK--AKEAFESTKRMLDFFEELFGVPYPFDKYDQVAVPDFNFGAMENQGLVTFGEKVLADETATDADYER--RESVIAH 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 416 EIGHQWFGNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMkvenFKTSEIQ 495
Cdd:COG0308  297 ELAHQWFGNLVTCADWDDLWLNEGFATYMEQLFSEDLYGKDAADRIFVGALRSYAFAEDAGPNAHPIRP----DDYPEIE 372
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 496 ELFDIFTYSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRhfqmAIDDQSTVILpatiKNIMDSWTHQSG 575
Cdd:COG0308  373 NFFDGIVYEKGALVLHMLRTLLGDEAFRAGLRLYFARHAGGNATTEDFLA----ALEEASGRDL----SAFFDQWLYQAG 444
                        490       500
                 ....*....|....*....|....*
gi 296439457 576 FPVITLNVS-------TGVMKQEPF 593
Cdd:COG0308  445 LPTLEVEYEydadgkvTLTLRQTPP 469
Peptidase_M1 pfam01433
Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ ...
343-570 1.58e-68

Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity.


Pssm-ID: 426262 [Multi-domain]  Cd Length: 219  Bit Score: 227.94  E-value: 1.58e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  343 FALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWF 422
Cdd:pfam01433   1 YALEITVKLLEFYEDYFNIPYPLPKYDLVALPDFSAGAMENWGLITYRETLLLYDPGNSSTSDKQRVASVIAHELAHQWF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  423 GNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVEnfKTSEIQELFDIFT 502
Cdd:pfam01433  81 GNLVTMKWWDDLWLNEGFATYMEYLGTDALFPEWNIWEQFLLDEVQNAMARDALDSSHPITQNVN--DPSEIDDIFDAIP 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 296439457  503 YSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQstvilpaTIKNIMDSW 570
Cdd:pfam01433 159 YEKGASVLRMLETLLGEEVFQKGLRSYLKKFQYGNATTEDLWDALSEASGPL-------DVDSFMDTW 219
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
647-970 1.25e-67

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 229.08  E-value: 1.25e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  647 WVILNLNMTGYYRVNYDKLGWKKLNQQLEkdPKAIPVIHRLQLIDDAFSLSKNNYIEIETALELTKYLAEEDEIIVWHTV 726
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQLL--SKVLSPLDRAGLIDDAFALARAGELSTSDALDLVLAYLNETDYVVWSAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  727 LVNLVTrdlvsevnIYDIYSLLKRYLLKRlNLIWNIYSTIIRE--NVLALQDDYLALISLEKLFVTACWLGLEDCLQLSK 804
Cdd:pfam11838  79 LSQLST--------LRSLLSADPEYEALK-AFLRKLLSPLAEKlgWEAPPGESHLDRQLRALLLSAACSAGDPECVAEAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  805 ELFAKWVDHPENeIPYPIKDVVLCYGIALGSDKEWDILLNTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAISTSPF 884
Cdd:pfam11838 150 KLFDAWLDGDDA-IPPDLRWAVYCAAVANGGEAEWDALLERYRDTTSPSEKERALRALAATPDPELLQRALELALDSDEV 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  885 TSNE-TNIIEVVASSEVGRYVAKDFLVNNWQAVSKRYGTQSLI-NLIYTIGRTVTTDLQIVELQQFFSNMLEEHQRIRVH 962
Cdd:pfam11838 229 RNQDlRAVIAGLASNPAGRDLAWDFVKENWDALVKRLGGGSSLgRLVKGLTPSFSTEEELDEVEAFFADKDTPGLRRALA 308

                  ....*...
gi 296439457  963 ANLQTIKN 970
Cdd:pfam11838 309 QALETIRR 316
pepN_strep_liv TIGR02412
aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the ...
217-550 1.47e-47

aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).


Pssm-ID: 274121 [Multi-domain]  Cd Length: 831  Bit Score: 183.45  E-value: 1.47e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  217 REGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITMIHHPSYVALSNmpKLGQSEKEDVNGSKWTvtt 296
Cdd:TIGR02412 102 NTGEGLHRFVDPVDGEVYLYTQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISN--SRETDVTPEPADRRWE--- 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  297 FSTTPHMPTYLVAFVICDYDHVNRTERGKEIRIWARKDAIANGSADFALNITGPIFSFLEDLFNISYSLPKTDIIALPSF 376
Cdd:TIGR02412 177 FPETPKLSTYLTAVAAGPYHSVQDESRSYPLGIYARRSLAQYLDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEF 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  377 DNHAMENWGLMIFDESGLLLEPKDQlTEKKTLISyVVSHEIGHQWFGNLVTMNWWNNIWLNEGFASYFEF----EVINYf 452
Cdd:TIGR02412 257 NAGAMENAGCVTFAENFLHRAEATR-AEKENRAG-VILHEMAHMWFGDLVTMRWWNDLWLNESFAEYMGTlasaEATEY- 333
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  453 nPKLPRNeiFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFDIFTYSKGASMARMLSCFLNEHLFVSALKSYLKT 532
Cdd:TIGR02412 334 -TDAWTT--FAAQGKQWAYEADQLPTTHPIVADVAD--LADALSNFDGITYAKGASVLKQLVAWVGEEAFFAGVNAYFKR 408
                         330
                  ....*....|....*...
gi 296439457  533 FSYSNAEQDDLWRHFQMA 550
Cdd:TIGR02412 409 HAFGNATLDDLIDSLAKA 426
 
Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
105-572 1.67e-180

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 531.00  E-value: 1.67e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 105 LHYDLELWPQLRpdelpagSLPFTGRVNITVRCTVATSRLLLHSLFQDCERAEVRGPLSPGTGNATVGRVPvddvwfalD 184
Cdd:cd09601    1 LHYDLTLTPDLE-------NFTFSGSVTITLEVLEPTDTIVLHAKDLTITSASLTLKGGSGIIEVTVVTDE--------E 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 185 TEYMVLELSEPLKPGSSYELQLSFSGLVKEDLReGLFLNVYTD-QGERRALLASQLEPTFARYVFPCFDEPALKATFNIT 263
Cdd:cd09601   66 TEFLTITLDETLPPGENYTLSIEFTGKLNDDLR-GFYRSSYTDeDGETRYLAATQFEPTDARRAFPCFDEPAFKATFDIT 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 264 MIHHPSYVALSNMPKLgqseKEDVNGSKWTVTTFSTTPHMPTYLVAFVICDYDHV-NRTERGKEIRIWARKDAIanGSAD 342
Cdd:cd09601  145 ITHPKGYTALSNMPPV----ESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIeSTTKSGVPVRVYARPGKI--EQGD 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 343 FALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWF 422
Cdd:cd09601  219 FALEVAPKILDFYEDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASDKQRVAEVIAHELAHQWF 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 423 GNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFDIFT 502
Cdd:cd09601  299 GNLVTMKWWDDLWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVES--PSEISEIFDAIS 376
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 503 YSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQSTVilpaTIKNIMDSWTH 572
Cdd:cd09601  377 YSKGASVLRMLENFLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPL----DVKEIMDSWTL 442
PepN COG0308
Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];
97-593 1.43e-98

Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];


Pssm-ID: 440077 [Multi-domain]  Cd Length: 609  Bit Score: 323.13  E-value: 1.43e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  97 RLPPWLVPLHYDLELwpqlrpdELPAGSLPFTGRVNITVRCTVATsrllLHSLFQDCERAEVRgplspgtgNATVGRVPV 176
Cdd:COG0308   10 YRPPGYDVTHYDLDL-------DLDPATTRLSGTATITFTATEAP----LDSLVLDLKGLEVT--------SVTVDGKPL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 177 DdvwFALDTEYMVLELSEPLKPGSSYELQLSFSGLVKEDLrEGLFLNVYTDQGERraLLASQLEPTFARYVFPCFDEPAL 256
Cdd:COG0308   71 D---FTRDGERLTITLPKPLAPGETFTLEIEYSGKPSNGG-EGLYRSGDPPDGPP--YLYTQCEPEGARRWFPCFDHPDD 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 257 KATFNITMIHHPSYVALSNMPKLGQSEKEDvngsKWTVTTFSTTPHMPTYLVAFVICDYDHVNRT-ERGKEIRIWARKDA 335
Cdd:COG0308  145 KATFTLTVTVPAGWVAVSNGNLVSETELGD----GRTTWHWADTQPIPTYLFALAAGDYAVVEDTfASGVPLRVYVRPGL 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 336 IANgsADFALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKtlISYVVSH 415
Cdd:COG0308  221 ADK--AKEAFESTKRMLDFFEELFGVPYPFDKYDQVAVPDFNFGAMENQGLVTFGEKVLADETATDADYER--RESVIAH 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 416 EIGHQWFGNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMkvenFKTSEIQ 495
Cdd:COG0308  297 ELAHQWFGNLVTCADWDDLWLNEGFATYMEQLFSEDLYGKDAADRIFVGALRSYAFAEDAGPNAHPIRP----DDYPEIE 372
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 496 ELFDIFTYSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRhfqmAIDDQSTVILpatiKNIMDSWTHQSG 575
Cdd:COG0308  373 NFFDGIVYEKGALVLHMLRTLLGDEAFRAGLRLYFARHAGGNATTEDFLA----ALEEASGRDL----SAFFDQWLYQAG 444
                        490       500
                 ....*....|....*....|....*
gi 296439457 576 FPVITLNVS-------TGVMKQEPF 593
Cdd:COG0308  445 LPTLEVEYEydadgkvTLTLRQTPP 469
M1_APN cd09602
Peptidase M1 family including aminopeptidase N catalytic domain; This model represents the ...
105-550 1.32e-76

Peptidase M1 family including aminopeptidase N catalytic domain; This model represents the catalytic domain of bacterial and eukaryotic aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341065 [Multi-domain]  Cd Length: 440  Bit Score: 258.21  E-value: 1.32e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 105 LHYDLELwpqlrpdELPAGSLPFTGRVNITVRCTVATSrlllhSLFQDCERAEVRGplspgtgnATVGRVPVDDVWFalD 184
Cdd:cd09602   16 VSYDLDL-------DLTEGAETFRGTVTIRFTLREPGA-----SLFLDFRGGEVKS--------VTLNGRPLDPSAF--D 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 185 TEYMVLElsePLKPGSSYELQLSFSGlvkEDLREGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITM 264
Cdd:cd09602   74 GERITLP---GLLKAGENTVVVEFTA---PYSSDGEGLHRFVDPADGETYLYTLFEPDDARRVFPCFDQPDLKATFTLTV 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 265 IHHPSYVALSNMPKLGQSEKEDVNgskwtVTTFSTTPHMPTYLVAFVICDYDHVNRTERGKEIRIWARK-DAIANGSADF 343
Cdd:cd09602  148 TAPADWTVISNGPETSTEEAGGRK-----RWRFAETPPLSTYLFAFVAGPYHRVEDEHDGIPLGLYCREsLAEYERDADE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 344 ALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQlTEKKTLISyVVSHEIGHQWFG 423
Cdd:cd09602  223 IFEVTKQGLDFYEDYFGIPYPFGKYDQVFVPEFNFGAMENPGAVTFRESYLFREEPTR-AQRLRRAN-TILHEMAHMWFG 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 424 NLVTMNWWNNIWLNEGFASYFEFEVIN----YFNPKLprneIFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFD 499
Cdd:cd09602  301 DLVTMKWWDDLWLNESFADFMAAKALAeatpFTDAWL----TFLLRRKPWAYRADQLPTTHPIAQDVPD--LEAAGSNFD 374
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 296439457 500 IFTYSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMA 550
Cdd:cd09602  375 GITYAKGASVLKQLVALVGEEAFRAGLREYFKKHAYGNATLDDLIAALDEA 425
M1 cd09595
Peptidase M1 family includes the catalytic domains of aminopeptidase N and leukotriene A4 ...
127-544 1.23e-69

Peptidase M1 family includes the catalytic domains of aminopeptidase N and leukotriene A4 hydrolase; The model represents the catalytic domains of M1 peptidase family members including aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile upon activation during catalysis. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. APN expression is dysregulated in many inflammatory diseases and is enhanced in numerous tumor cells, making it a lead target in the development of anti-cancer and anti-inflammatory drugs. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase in LTA4H is as yet unknown, while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals.


Pssm-ID: 341058 [Multi-domain]  Cd Length: 413  Bit Score: 238.11  E-value: 1.23e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 127 FTGRVNITVRCTVATSRLLLHSLFQDCERAEVRGplspgtgnatvgrvpvDDVWFALDTEYM--VLELSEPLKPGSSYEL 204
Cdd:cd09595   16 LNGTETLTVDASQVGRELVLDLVGLTIHSVSVNG----------------AAVDFGEREHYDgeKLTIPGPKPPGQTFTV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 205 QLSFSGLVKEDlreGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITM-IHHPSYVALSNMPKlgqSE 283
Cdd:cd09595   80 RISFEAKPSKN---LLGWLWEQTAGKEKPYLFTQFEATHARRIFPCIDHPAVKATFTVTItTPKKDLLASNGALV---GE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 284 KEDVNGSKWTvtTFSTTPHMPTYLVAFVICDYDHVNRT---ERGKEIRIWARKDAIANgsADFALNITGPIFSFLEDLFN 360
Cdd:cd09595  154 ETGANGRKTY--RFEDTPPIPTYLVAVVVGDLEFKYVTvksQPRVGLSVYSEPLQVDQ--AQYAFDATRAALAWFEDYFG 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 361 ISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKtlISYVVSHEIGHQWFGNLVTMNWWNNIWLNEGF 440
Cdd:cd09595  230 GPYPLPKYDLLAVPDFNSGAMENPGLITFRTTYLLRSKVTDTGARS--IENVIAHELAHQWFGNLVTMRWWNDLWLNEGF 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 441 ASYFEFEVINYFNPKLPRNEIFFSNILHnILREDHALVTRAVAMKVENFKtsEIQELFDIFTYSKGASMARMLSCFLNEH 520
Cdd:cd09595  308 AVYYENRIMDATFGTSSRHLDQLSGSSD-LNTEQLLEDSSPTSTPVRSPA--DPDVAYDGVTYAKGALVLRMLEELVGEE 384
                        410       420
                 ....*....|....*....|....
gi 296439457 521 LFVSALKSYLKTFSYSNAEQDDLW 544
Cdd:cd09595  385 AFDKGVQAYFNRHKFKNATTDDFI 408
Peptidase_M1 pfam01433
Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ ...
343-570 1.58e-68

Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity.


Pssm-ID: 426262 [Multi-domain]  Cd Length: 219  Bit Score: 227.94  E-value: 1.58e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  343 FALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWF 422
Cdd:pfam01433   1 YALEITVKLLEFYEDYFNIPYPLPKYDLVALPDFSAGAMENWGLITYRETLLLYDPGNSSTSDKQRVASVIAHELAHQWF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  423 GNLVTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVEnfKTSEIQELFDIFT 502
Cdd:pfam01433  81 GNLVTMKWWDDLWLNEGFATYMEYLGTDALFPEWNIWEQFLLDEVQNAMARDALDSSHPITQNVN--DPSEIDDIFDAIP 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 296439457  503 YSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQstvilpaTIKNIMDSW 570
Cdd:pfam01433 159 YEKGASVLRMLETLLGEEVFQKGLRSYLKKFQYGNATTEDLWDALSEASGPL-------DVDSFMDTW 219
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
647-970 1.25e-67

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 229.08  E-value: 1.25e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  647 WVILNLNMTGYYRVNYDKLGWKKLNQQLEkdPKAIPVIHRLQLIDDAFSLSKNNYIEIETALELTKYLAEEDEIIVWHTV 726
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQLL--SKVLSPLDRAGLIDDAFALARAGELSTSDALDLVLAYLNETDYVVWSAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  727 LVNLVTrdlvsevnIYDIYSLLKRYLLKRlNLIWNIYSTIIRE--NVLALQDDYLALISLEKLFVTACWLGLEDCLQLSK 804
Cdd:pfam11838  79 LSQLST--------LRSLLSADPEYEALK-AFLRKLLSPLAEKlgWEAPPGESHLDRQLRALLLSAACSAGDPECVAEAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  805 ELFAKWVDHPENeIPYPIKDVVLCYGIALGSDKEWDILLNTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAISTSPF 884
Cdd:pfam11838 150 KLFDAWLDGDDA-IPPDLRWAVYCAAVANGGEAEWDALLERYRDTTSPSEKERALRALAATPDPELLQRALELALDSDEV 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  885 TSNE-TNIIEVVASSEVGRYVAKDFLVNNWQAVSKRYGTQSLI-NLIYTIGRTVTTDLQIVELQQFFSNMLEEHQRIRVH 962
Cdd:pfam11838 229 RNQDlRAVIAGLASNPAGRDLAWDFVKENWDALVKRLGGGSSLgRLVKGLTPSFSTEEELDEVEAFFADKDTPGLRRALA 308

                  ....*...
gi 296439457  963 ANLQTIKN 970
Cdd:pfam11838 309 QALETIRR 316
M1_APN_like cd09603
Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains mostly ...
105-548 1.81e-58

Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341066 [Multi-domain]  Cd Length: 410  Bit Score: 206.67  E-value: 1.81e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 105 LHYDLELwpQLRPDElpaGSLpfTGRVNITVRCTVATSRLLLhslfqDCERAEVRgplspgtgNATVGRVPVDdvWFALD 184
Cdd:cd09603    4 LHYDLDL--DYDPAT---KSL--SGTATITFRATQDLDSLQL-----DLVGLTVS--------SVTVDGVPAA--FFTHD 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 185 TEYMVLELSEPLKPGSSYELQLSFSGlVKEDLREGLFLNVYTDQGERRALLASQlePTFARYVFPCFDEPALKATFNITM 264
Cdd:cd09603   62 GDKLVITLPRPLAAGETFTVTVRYSG-KPRPAGYPPGDGGGWEEGDDGVWTAGQ--PEGASTWFPCNDHPDDKATYDITV 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 265 IHHPSYVALSNmpklGQSEKEDVNGSKWTVTTFSTTPHMPTYLVAFVICDYDHVNRTE-RGKEIRIWARKDAIANGSADF 343
Cdd:cd09603  139 TVPAGLTVVSN----GRLVSTTTNGGGTTTWHWKMDYPIATYLVTLAVGRYAVVEDGSgGGIPLRYYVPPGDAAKAKASF 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 344 ALniTGPIFSFLEDLFnISYSLPKTDIIALPSFdNHAMENWGLMIFDESGLLLEPKDQltekktlisYVVSHEIGHQWFG 423
Cdd:cd09603  215 AR--TPEMLDFFEELF-GPYPFEKYGQVVVPDL-GGGMEHQTATTYGNNFLNGDRGSE---------RLIAHELAHQWFG 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 424 NLVTMNWWNNIWLNEGFASYFEFEVINYFNPKlprneiffsNILHNILREDHALVTRAVAMkveNFKTSEIQELFDIFTY 503
Cdd:cd09603  282 DSVTCADWADIWLNEGFATYAEWLWSEHKGGA---------DAYRAYLAGQRQDYLNADPG---PGRPPDPDDLFDRDVY 349
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 296439457 504 SKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQ 548
Cdd:cd09603  350 QKGALVLHMLRNLLGDEAFFAALRAYLARYAHGNVTTEDFIAAAE 394
Peptidase_M1_N pfam17900
Peptidase M1 N-terminal domain; This domain is found at the N-terminus of aminopeptidases from ...
103-307 1.08e-48

Peptidase M1 N-terminal domain; This domain is found at the N-terminus of aminopeptidases from the M1 family.


Pssm-ID: 465557 [Multi-domain]  Cd Length: 186  Bit Score: 170.99  E-value: 1.08e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  103 VPLHYDLELWPQLRPDElpagslpFTGRVNITVRCTVATSRLLLHSLFQDCERAEVRGplspgtgNATVGRVPVDDVWFA 182
Cdd:pfam17900   1 VPEHYDLDLKIDLKNFT-------FSGSVTITLQLNNATNVIVLHASDLTIRSISLSD-------EVTSDGVPADFTEDQ 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  183 LDTEYMVLELSEPLKPGSSYELQLSFSGLVKEDLReGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNI 262
Cdd:pfam17900  67 KDGEKLTIVLPETLNQTGPYTLEIEYSGELNDSMT-GFYRSTYTDNGEKKVLVTTQFEPTDARSAFPCFDEPSVKATFTI 145
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 296439457  263 TMIHHPSYVALSNMPKlgqsEKEDVNGSKWTVTTFSTTPHMPTYL 307
Cdd:pfam17900 146 SIIHPKDYTALSNMPV----IASEPLENGWVITTFEQTPKMSTYL 186
pepN_strep_liv TIGR02412
aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the ...
217-550 1.47e-47

aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).


Pssm-ID: 274121 [Multi-domain]  Cd Length: 831  Bit Score: 183.45  E-value: 1.47e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  217 REGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITMIHHPSYVALSNmpKLGQSEKEDVNGSKWTvtt 296
Cdd:TIGR02412 102 NTGEGLHRFVDPVDGEVYLYTQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISN--SRETDVTPEPADRRWE--- 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  297 FSTTPHMPTYLVAFVICDYDHVNRTERGKEIRIWARKDAIANGSADFALNITGPIFSFLEDLFNISYSLPKTDIIALPSF 376
Cdd:TIGR02412 177 FPETPKLSTYLTAVAAGPYHSVQDESRSYPLGIYARRSLAQYLDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEF 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  377 DNHAMENWGLMIFDESGLLLEPKDQlTEKKTLISyVVSHEIGHQWFGNLVTMNWWNNIWLNEGFASYFEF----EVINYf 452
Cdd:TIGR02412 257 NAGAMENAGCVTFAENFLHRAEATR-AEKENRAG-VILHEMAHMWFGDLVTMRWWNDLWLNESFAEYMGTlasaEATEY- 333
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  453 nPKLPRNeiFFSNILHNILREDHALVTRAVAMKVENfkTSEIQELFDIFTYSKGASMARMLSCFLNEHLFVSALKSYLKT 532
Cdd:TIGR02412 334 -TDAWTT--FAAQGKQWAYEADQLPTTHPIVADVAD--LADALSNFDGITYAKGASVLKQLVAWVGEEAFFAGVNAYFKR 408
                         330
                  ....*....|....*...
gi 296439457  533 FSYSNAEQDDLWRHFQMA 550
Cdd:TIGR02412 409 HAFGNATLDDLIDSLAKA 426
M1_LTA4H cd09599
Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain; This model represents ...
237-535 2.65e-23

Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain; This model represents the N-terminal catalytic domain of leukotriene A4 hydrolase (LTA4H; E.C. 3.3.2.6) and the close homolog cold-active aminopeptidase (Colwellia psychrerythraea-type peptidase; ColAP), both members of the aminopeptidase M1 family. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase is poorly understood while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals. It accepts a variety of substrates, including some opioid, di- and tripeptides, as well as chromogenic aminoacyl-p-nitroanilide derivatives. The aminopeptidase activity of LTA4H is possibly involved in the processing of peptides related to inflammation and host defense. Kinetic analysis shows that LTA4H hydrolyzes arginyl tripeptides with high efficiency and specificity, indicating its function as an arginyl aminopeptidase. Thermodynamic characterization using different biophysical methods shows that structurally distinct inhibitors of the LTA4H occupy different regions of the binding site; while some (RB202, ARM1 and SC57461A) bind to the hydrophobic hydrolase side, both bestatin and captopril are located at the hydrophilic peptidase side. LTB4H overexpression is associated with different pathological conditions and diseases such as cystic fibrosis, coronary heart disease, sepsis, shock, connective tissue disease, and chronic obstructive pulmonary disease. It is also overexpressed in certain human cancers, and has been identified as a functionally important target for mediating anticancer properties of resveratrol, a well-known red wine polyphenolic compound with cancer chemopreventive activity.


Pssm-ID: 341062 [Multi-domain]  Cd Length: 442  Bit Score: 104.08  E-value: 2.65e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 237 SQLEPTFARYVFPCFDEPALKATFNITMIHHPSYVALsnMPKLGQSEKEDVngsKWTVTTFSTTPHMPTYLVAFVICDyd 316
Cdd:cd09599  129 TQCQAIHARSLFPCQDTPSVKSTYSATVTVPKGLTAL--MSALRTGEKEEA---GTGTYTFEQPVPIPSYLIAIAVGD-- 201
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 317 hVNRTERGKEIRIWARKDAIANGSADFAlnITGPIFSFLEDLFnISYSLPKTDIIALP-SFDNHAMENwGLMIFdesgll 395
Cdd:cd09599  202 -LESREIGPRSGVWAEPSVVDAAAEEFA--DTEKFLKAAEKLY-GPYVWGRYDLLVLPpSFPYGGMEN-PCLTF------ 270
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 396 LEPkdqltekkTLIS------YVVSHEIGHQWFGNLVTMNWWNNIWLNEGFASYFEFEVI------NYFNpklprneifF 463
Cdd:cd09599  271 ATP--------TLIAgdrslvDVIAHEIAHSWSGNLVTNANWEHFWLNEGFTVYLERRILerlygeEYRQ---------F 333
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 464 SNILHNIlredhALVTRAVAMKVENFKTSEIQELFDI-----FT---YSKGASMARMLSCFLNEHLFVSALKSYLKTFSY 535
Cdd:cd09599  334 EAILGWK-----DLQESIKEFGEDPPYTLLVPDLKGVdpddaFSsvpYEKGFQFLYYLEQLGGREVFDPFLRAYFKKFAF 408
leuko_A4_hydro TIGR02411
leukotriene A-4 hydrolase/aminopeptidase; Members of this family represent a distinctive ...
190-547 1.23e-22

leukotriene A-4 hydrolase/aminopeptidase; Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.


Pssm-ID: 274120 [Multi-domain]  Cd Length: 602  Bit Score: 103.70  E-value: 1.23e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  190 LELSEPLKPGSSYELQLSFSGLVKEDLREGLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITmIHHPS 269
Cdd:TIGR02411  81 LTISLPIATSKNDEFVLNISFSTTPKCTALQWLNPEQTSGKKHPYLFSQCQAIHARSLFPCQDTPSVKSTYTAE-VESPL 159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  270 YVALSNMPKLGQSEKEdvngskwTVTTFSTTPHMPTYLVAFVICDYDHVNRTERGKeirIWARKDAIANGSADF------ 343
Cdd:TIGR02411 160 PVLMSGIRDGETSNDP-------GKYLFKQKVPIPAYLIAIASGDLASAPIGPRST---VYSEPEQLEKCQYEFendtek 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  344 ----ALNITGPifsfledlfnisYSLPKTDIIALP-SFDNHAMENwGLMIFDESGLLLEPKDQltekktliSYVVSHEIG 418
Cdd:TIGR02411 230 fiktAEDLIFP------------YEWGQYDLLVLPpSFPYGGMEN-PNLTFATPTLIAGDRSN--------VDVIAHELA 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457  419 HQWFGNLVTMNWWNNIWLNEGFASYFEFEVIN--YFNPKLPRNEIFFSNILHN---ILREDHALVTRavamkVENFKTSE 493
Cdd:TIGR02411 289 HSWSGNLVTNCSWEHFWLNEGWTVYLERRIIGrlYGEKTRHFSALIGWGDLQEsvkTLGETPEFTKL-----VVDLKDND 363
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 296439457  494 IQELFDIFTYSKGASMARMLSCFL-NEHLFVSALKSYLKTFSYSNAEQDDlWRHF 547
Cdd:TIGR02411 364 PDDAFSSVPYEKGFNFLFYLEQLLgGPAEFDPFLRHYFKKFAYKSLDTYQ-FKDA 417
M1_APN_like cd09604
Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains ...
127-548 1.97e-19

Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341067 [Multi-domain]  Cd Length: 440  Bit Score: 92.34  E-value: 1.97e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 127 FTGRVNITV--RCTVATSRLLLH---SLFQDCERAEVRGPLSPGT-----GNATVGRVPVDDVWFALDTEY--MVLELSE 194
Cdd:cd09604   14 LTGKETITYtnNSPDTLDELYFHlypNAFKPGSTMPARDSRIAKLkgdepGGIDIDSVKVNGKGLKLEVTLtiTRLKLAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 195 P--LKPGSSYELQLSFSGLV-KEDLREGLF------------LNVYTDQGERRALLASQLEPTFARYvfpcfdepalkAT 259
Cdd:cd09604   94 PlpLKPGESVTVEIDFTVKLpEQGGRFGYDgdeynlaqwypkLAVYDDGGWNTDPYYGRGEFFYSDF-----------GD 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 260 FNITmIHHPS--YVALSnmpklGQSEKEDVNGSKWTVTTFsTTPHMPTylVAFVIC-DYDHVNRTERGKEIRIWARKDAI 336
Cdd:cd09604  163 YDVT-ITVPKnyVVAAT-----GELQNPEEVLDGTKTWHF-KAENVRD--FAWAASpDFVVDAATVDGVTVNVYYLPENA 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 337 ANgsADFALNITGPIFSFLEDLFnISYSLPKTDIIALPSFDnHAMEnWGLMIFDESGLLLEPKDqltekktlISYVVSHE 416
Cdd:cd09604  234 EA--AERALEYAKDALEFFSEKF-GPYPYPELDVVQGPFGG-GGME-YPGLVFIGSRLYDPKRS--------LEGVVVHE 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 417 IGHQWFGNLVTmnwwNNI----WLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDhalvTRAVAMKVENFKTs 492
Cdd:cd09604  301 IAHQWFYGIVG----NDErrepWLDEGLATYAESLYLEEKYGKEAADELLGRRYYRAYARGP----GGPINLPLDTFPD- 371
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 296439457 493 eiQELFDIFTYSKGASMARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQ 548
Cdd:cd09604  372 --GSYYSNAVYSKGALFLEELREELGDEAFDKALREYYRRYKFKHPTPEDFFRTAE 425
M1_APN cd09600
Peptidase M1 family, including aminopeptidase N catalytic domain; This model represents the ...
234-533 2.88e-15

Peptidase M1 family, including aminopeptidase N catalytic domain; This model represents the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. It includes bacterial-type alanyl aminopeptidases as well as PfA-M1 aminopeptidase (Plasmodium falciparum-type). APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341063 [Multi-domain]  Cd Length: 434  Bit Score: 79.48  E-value: 2.88e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 234 LLASQLEP------TFaryvFPcfDEPALKATFNITMI----HHPsyVALSNMPKLGQSEKEdvNGSKWTVttFSTtPH- 302
Cdd:cd09600  108 ILCTQCEAegfrriTY----FP--DRPDVMSKFTVTIEadkeKYP--VLLSNGNLIEEGELP--NGRHFAV--WED-PFp 174
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 303 MPTYLVAFVICDYDHVN---RTERGKEI--RIWARKDAIANgsADFALNitgpifsFL-------EDLFNISYSLPKTDI 370
Cdd:cd09600  175 KPSYLFALVAGDLGSVEdtfTTKSGRKVklRIYVEPGNEDK--CHHAME-------SLkkamkwdEERFGLEYDLDLFNI 245
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 371 IALPSFDNHAMENWGLMIFDESGLLLEPKDQLTEKKTLISYVVSHEIGHQWFGNLVTMNWWNNIWLNEGFASYFEFEvin 450
Cdd:cd09600  246 VAVDDFNMGAMENKGLNIFNSKYVLADPETATDADYERIESVIAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQE--- 322
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 451 yfnpklprneifFSNILHN--ILREDHALVTRAV-----------------AMKVENFKTSEIqelfdiftYSKGASMAR 511
Cdd:cd09600  323 ------------FSADMNSraVKRIEDVRRLRSAqfpedagpmahpirpdsYIEINNFYTVTV--------YEKGAEVIR 382
                        330       340
                 ....*....|....*....|..
gi 296439457 512 MLSCFLNEHLFVSALKSYLKTF 533
Cdd:cd09600  383 MLHTLLGEEGFRKGMDLYFERH 404
GluZincin cd09594
Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, ...
347-448 1.23e-07

Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins); The Gluzincin family (thermolysin-like peptidases or TLPs) includes several zinc-dependent metallopeptidases such as M1, M2, M3, M4, M13, M32, M36 peptidases (MEROPS classification), which contain the HEXXH motif as part of their active site. Peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The M1 family includes aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity such that the two activities occupy different, but overlapping sites. The M3_like peptidases include the M2_ACE, M3 or neurolysin-like family (subfamilies M3B_PepF and M3A) and M32_Taq peptidases. The M2 peptidase angiotensin converting enzyme (ACE, EC 3.4.15.1) catalyzes the conversion of decapeptide angiotensin I to the potent vasopressor octapeptide angiotensin II. ACE is a key component of the renin-angiotensin system that regulates blood pressure, thus ACE inhibitors are important for the treatment of hypertension. M3A includes thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (3.4.24.16), and the mitochondrial intermediate peptidase; and M3B includes oligopeptidase F. The M32 family includes eukaryotic enzymes from protozoa Trypanosoma cruzi, a causative agent of Chagas' disease, and from Leishmania major, a parasite that causes leishmaniasis, making these enzymes attractive targets for drug development. The M4 family includes secreted protease thermolysin (EC 3.4.24.27), pseudolysin, aureolysin, and neutral protease as well as bacillolysin (EC 3.4.24.28) that degrade extracellular proteins and peptides for bacterial nutrition, especially prior to sporulation. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing as well as in production of the artificial sweetener aspartame. The M13 family includes neprilysin (EC 3.4.24.11) and endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), which fulfill a broad range of physiological roles due to the greater variation in the S2' subsite allowing substrate specificity and are prime therapeutic targets for selective inhibition. The peptidase M36 fungalysin family includes endopeptidases from pathogenic fungi. Fungalysin hydrolyzes extracellular matrix proteins such as elastin and keratin. Aspergillus fumigatus causes the pulmonary disease aspergillosis by invading the lungs of immuno-compromised animals and secreting fungalysin that possibly breaks down proteinaceous structural barriers.


Pssm-ID: 341057 [Multi-domain]  Cd Length: 105  Bit Score: 50.56  E-value: 1.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439457 347 ITGPIFSFLEDLFNIS-----YSLPKTDIIALP---SFDNHAMENWGLMIFDESGLLLEPKdqltekktLISYVVSHEIG 418
Cdd:cd09594    3 YAHETYKYYEELLGRTsfrypVSPIYSLLVYPAyveVNAYNAMWIPSTNIFYGAGILDTLS--------GTIDVLAHELT 74
                         90       100       110
                 ....*....|....*....|....*....|.
gi 296439457 419 HQWFGNLVT-MNWWNNIWLNEGFASYFEFEV 448
Cdd:cd09594   75 HAFTGQFSNlMYSWSSGWLNEGISDYFGGLV 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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