RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName: Full=Membrane-type matrix metalloproteinase 5; Short=MT-MMP 5; Short=MTMMP5; AltName: Full=Membrane-type-5 matrix metalloproteinase; Short=MT5-MMP; Short=MT5MMP; Contains: RecName: Full=Processed matrix metalloproteinase-24; Flags: Precursor
M10A family metallopeptidase( domain architecture ID 12021161)
M10A family metallopeptidase similar to matrix metalloproteinases with a C-terminal hemopexin repeat-containing domain that may be endopeptidases that degrade various components of the extracellular matrix; also contains a possible peptidoglycan binding domain at the N-terminus and a DUF3377 domain at the C-terminal end
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
162-327 | 2.12e-94 | ||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. : Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 287.59 E-value: 2.12e-94
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HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
377-569 | 4.40e-72 | ||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. : Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 231.05 E-value: 4.40e-72
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DUF3377 | pfam11857 | Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain ... |
575-645 | 4.31e-31 | ||||
Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 70 amino acids in length. : Pssm-ID: 463374 Cd Length: 72 Bit Score: 115.88 E-value: 4.31e-31
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PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
82-134 | 2.16e-08 | ||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. : Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 50.59 E-value: 2.16e-08
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Name | Accession | Description | Interval | E-value | ||||
Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
162-327 | 2.12e-94 | ||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 287.59 E-value: 2.12e-94
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ZnMc_MMP | cd04278 | Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
162-327 | 3.43e-88 | ||||
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases). Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 271.38 E-value: 3.43e-88
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HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
377-569 | 4.40e-72 | ||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 231.05 E-value: 4.40e-72
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ZnMc | smart00235 | Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ... |
161-328 | 5.22e-36 | ||||
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site. Pssm-ID: 214576 [Multi-domain] Cd Length: 139 Bit Score: 132.09 E-value: 5.22e-36
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DUF3377 | pfam11857 | Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain ... |
575-645 | 4.31e-31 | ||||
Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 70 amino acids in length. Pssm-ID: 463374 Cd Length: 72 Bit Score: 115.88 E-value: 4.31e-31
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Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
476-521 | 1.84e-11 | ||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 59.12 E-value: 1.84e-11
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HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
476-521 | 3.49e-10 | ||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 55.33 E-value: 3.49e-10
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PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
82-134 | 2.16e-08 | ||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 50.59 E-value: 2.16e-08
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COG5549 | COG5549 | Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]; ... |
185-326 | 3.84e-05 | ||||
Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 444292 [Multi-domain] Cd Length: 234 Bit Score: 45.45 E-value: 3.84e-05
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archmetzin | NF033823 | archaemetzincin family Zn-dependent metalloprotease; |
272-300 | 1.38e-04 | ||||
archaemetzincin family Zn-dependent metalloprotease; Pssm-ID: 468195 Cd Length: 170 Bit Score: 42.99 E-value: 1.38e-04
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Name | Accession | Description | Interval | E-value | ||||
Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
162-327 | 2.12e-94 | ||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 287.59 E-value: 2.12e-94
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ZnMc_MMP | cd04278 | Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
162-327 | 3.43e-88 | ||||
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases). Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 271.38 E-value: 3.43e-88
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HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
377-569 | 4.40e-72 | ||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 231.05 E-value: 4.40e-72
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ZnMc | smart00235 | Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ... |
161-328 | 5.22e-36 | ||||
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site. Pssm-ID: 214576 [Multi-domain] Cd Length: 139 Bit Score: 132.09 E-value: 5.22e-36
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DUF3377 | pfam11857 | Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain ... |
575-645 | 4.31e-31 | ||||
Domain of unknown function (DUF3377); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 70 amino acids in length. Pssm-ID: 463374 Cd Length: 72 Bit Score: 115.88 E-value: 4.31e-31
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ZnMc_serralysin_like | cd04277 | Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases ... |
168-327 | 1.38e-18 | ||||
Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases are important virulence factors in pathogenic bacteria. They may be secreted into the medium via a mechanism found in gram-negative bacteria, that does not require n-terminal signal sequences which are cleaved after the transmembrane translocation. A calcium-binding domain c-terminal to the metalloprotease domain, which contains multiple tandem repeats of a nine-residue motif including the pattern GGxGxD, and which forms a parallel beta roll may be involved in the translocation mechanism and/or substrate binding. Serralysin family members may have a broad spectrum of substrates each, including host immunoglobulins, complement proteins, cell matrix and cytoskeletal proteins, as well as antimicrobial peptides. Pssm-ID: 239804 [Multi-domain] Cd Length: 186 Bit Score: 84.00 E-value: 1.38e-18
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ZnMc_MMP_like_1 | cd04279 | Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and ... |
186-327 | 2.15e-18 | ||||
Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin. Pssm-ID: 239806 [Multi-domain] Cd Length: 156 Bit Score: 82.50 E-value: 2.15e-18
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ZnMc | cd00203 | Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major ... |
168-326 | 6.29e-15 | ||||
Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease. Pssm-ID: 238124 [Multi-domain] Cd Length: 167 Bit Score: 72.94 E-value: 6.29e-15
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ZnMc_MMP_like | cd04268 | Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix ... |
165-326 | 1.39e-11 | ||||
Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases. Pssm-ID: 239796 [Multi-domain] Cd Length: 165 Bit Score: 63.28 E-value: 1.39e-11
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Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
476-521 | 1.84e-11 | ||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 59.12 E-value: 1.84e-11
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HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
476-521 | 3.49e-10 | ||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 55.33 E-value: 3.49e-10
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Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
429-467 | 5.86e-10 | ||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 54.88 E-value: 5.86e-10
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HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
429-473 | 3.06e-09 | ||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 53.02 E-value: 3.06e-09
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PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
82-134 | 2.16e-08 | ||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 50.59 E-value: 2.16e-08
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HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
391-426 | 3.54e-08 | ||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 49.93 E-value: 3.54e-08
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Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
389-426 | 8.47e-07 | ||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 46.02 E-value: 8.47e-07
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Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
525-569 | 1.32e-06 | ||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 45.25 E-value: 1.32e-06
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HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
526-568 | 2.01e-06 | ||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 44.93 E-value: 2.01e-06
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COG5549 | COG5549 | Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]; ... |
185-326 | 3.84e-05 | ||||
Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 444292 [Multi-domain] Cd Length: 234 Bit Score: 45.45 E-value: 3.84e-05
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archmetzin | NF033823 | archaemetzincin family Zn-dependent metalloprotease; |
272-300 | 1.38e-04 | ||||
archaemetzincin family Zn-dependent metalloprotease; Pssm-ID: 468195 Cd Length: 170 Bit Score: 42.99 E-value: 1.38e-04
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ZnMc_MMP_like_3 | cd04327 | Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal ... |
180-292 | 2.25e-04 | ||||
Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin. Pssm-ID: 239819 [Multi-domain] Cd Length: 198 Bit Score: 42.75 E-value: 2.25e-04
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COG1913 | COG1913 | Predicted Zn-dependent protease [General function prediction only]; |
275-302 | 4.28e-04 | ||||
Predicted Zn-dependent protease [General function prediction only]; Pssm-ID: 441517 Cd Length: 175 Bit Score: 41.48 E-value: 4.28e-04
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Peptidase_M54 | cd11375 | Peptidase family M54, also called archaemetzincins or archaelysins; Peptidase M54 ... |
272-302 | 1.54e-03 | ||||
Peptidase family M54, also called archaemetzincins or archaelysins; Peptidase M54 (archaemetzincin or archaelysin) is a zinc-dependent aminopeptidase that contains the consensus zinc-binding sequence HEXXHXXGXXH/D and a conserved Met residue at the active site, and is thus classified as a metzincin. Archaemetzincins, first identified in archaea, are also found in bacteria and eukaryotes, including two human members, archaemetzincin-1 and -2 (AMZ1 and AMZ2). AMZ1 is mainly found in the liver and heart while AMZ2 is primarily expressed in testis and heart; both have been reported to degrade synthetic substrates and peptides. The Peptidase M54 family contains an extended metzincin concensus sequence of HEXXHXXGX3CX4CXMX17CXXC such that a second zinc ion is bound to four cysteines, thus resembling a zinc finger. Phylogenetic analysis of this family reveals a complex evolutionary process involving a series of lateral gene transfer, gene loss and genetic duplication events. Pssm-ID: 213029 Cd Length: 173 Bit Score: 39.97 E-value: 1.54e-03
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ZnMc_pappalysin_like | cd04275 | Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma ... |
236-292 | 7.08e-03 | ||||
Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved. Pssm-ID: 239802 [Multi-domain] Cd Length: 225 Bit Score: 38.47 E-value: 7.08e-03
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Blast search parameters | ||||
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