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Conserved domains on  [gi|1608039015|gb|QBX10969|]
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hypothetical protein JavanS518_0023 [Streptococcus satellite phage Javan518]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1492 super family cl06423
Protein of unknown function (DUF1492); This family consists of several hypothetical, highly ...
 64-113 2.67e-03

Protein of unknown function (DUF1492); This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.


The actual alignment was detected with superfamily member pfam07374:

Pssm-ID: 311366  Cd Length: 100  Bit Score: 34.82  E-value: 2.67e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1608039015  64 MIATLQDERQIAVIKARYVDDLSWDEILDKLGYSRNIVFKLHREALEVLD 113
Cdd:pfam07374  51 MINNLENPDSRSVLRMVYIDKMTIWQVCDKLNISRTTYYRLLRVATKELN 100
 
Name Accession Description Interval E-value
DUF1492 pfam07374
Protein of unknown function (DUF1492); This family consists of several hypothetical, highly ...
 64-113 2.67e-03

Protein of unknown function (DUF1492); This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.


Pssm-ID: 311366  Cd Length: 100  Bit Score: 34.82  E-value: 2.67e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1608039015  64 MIATLQDERQIAVIKARYVDDLSWDEILDKLGYSRNIVFKLHREALEVLD 113
Cdd:pfam07374  51 MINNLENPDSRSVLRMVYIDKMTIWQVCDKLNISRTTYYRLLRVATKELN 100
 
Name Accession Description Interval E-value
DUF1492 pfam07374
Protein of unknown function (DUF1492); This family consists of several hypothetical, highly ...
 64-113 2.67e-03

Protein of unknown function (DUF1492); This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.


Pssm-ID: 311366  Cd Length: 100  Bit Score: 34.82  E-value: 2.67e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1608039015  64 MIATLQDERQIAVIKARYVDDLSWDEILDKLGYSRNIVFKLHREALEVLD 113
Cdd:pfam07374  51 MINNLENPDSRSVLRMVYIDKMTIWQVCDKLNISRTTYYRLLRVATKELN 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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