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Conserved domains on  [gi|1631825418|gb|QCI09148|]
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hypothetical protein [Inkyuleea mariana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF751 super family cl05143
Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and ...
 4-62 2.17e-06

Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and algal proteins of unknown function. The family is exclusively found in phototrophic organizms and may therefore play a role in photosynthesis (personal obs:Moxon SJ).


The actual alignment was detected with superfamily member pfam05421:

Pssm-ID: 471196  Cd Length: 60  Bit Score: 39.86  E-value: 2.17e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1631825418  4 FWSNLNKFPRFLISVLIGFFLTTFQPIFELLQERNKRFISIMVLCLCFSILYKTLKLML 62
Cdd:pfam05421  1 FWDNVSRYPRYFITILLGIFLAAFEPLKPLLKNPVTAIALIGLLVGGFAFLYFTLRAML 59
 
Name Accession Description Interval E-value
DUF751 pfam05421
Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and ...
 4-62 2.17e-06

Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and algal proteins of unknown function. The family is exclusively found in phototrophic organizms and may therefore play a role in photosynthesis (personal obs:Moxon SJ).


Pssm-ID: 428463  Cd Length: 60  Bit Score: 39.86  E-value: 2.17e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1631825418  4 FWSNLNKFPRFLISVLIGFFLTTFQPIFELLQERNKRFISIMVLCLCFSILYKTLKLML 62
Cdd:pfam05421  1 FWDNVSRYPRYFITILLGIFLAAFEPLKPLLKNPVTAIALIGLLVGGFAFLYFTLRAML 59
 
Name Accession Description Interval E-value
DUF751 pfam05421
Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and ...
 4-62 2.17e-06

Protein of unknown function (DUF751); This family contains several plant, cyanobacterial and algal proteins of unknown function. The family is exclusively found in phototrophic organizms and may therefore play a role in photosynthesis (personal obs:Moxon SJ).


Pssm-ID: 428463  Cd Length: 60  Bit Score: 39.86  E-value: 2.17e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1631825418  4 FWSNLNKFPRFLISVLIGFFLTTFQPIFELLQERNKRFISIMVLCLCFSILYKTLKLML 62
Cdd:pfam05421  1 FWDNVSRYPRYFITILLGIFLAAFEPLKPLLKNPVTAIALIGLLVGGFAFLYFTLRAML 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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