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Conserved domains on  [gi|1632161153|gb|QCI56852|]
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cytochrome b, partial (mitochondrion) [Aphyocypris normalis]

Protein Classification

cytochrome b( domain architecture ID 11475912)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 797.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00131    5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00131   85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00131  165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00131  245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00131  325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 797.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00131    5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00131   85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00131  165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00131  245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00131  325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
5-366 4.64e-119

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 350.24  E-value: 4.64e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   5 PLMKIANDALvDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGAS 84
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  85 FFFICIYMHVARGLYYGSYLYKETCN--IGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICG 162
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYKKPRELNwiIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 163 GFSVDNATLTRFFAFH-FLLPFVVAAATILHLLFLHETGSNNPAG----LNSDADKISFHPYFSYKDLLGFVMMLLALTS 237
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 238 LALFSPNllGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRP 315
Cdd:COG1290   258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1632161153 316 ITQFLFCTLVADMIILTCIGGMPVehPYIIIGQIASVLYFALFLILTPLAG 366
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-202 9.97e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 265.77  E-value: 9.97e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   5 PLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGAS 84
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  85 FFFICIYMHVARGLYYGSY--LYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICG 162
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1632161153 163 GFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSN 202
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
14-200 1.70e-81

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 246.91  E-value: 1.70e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  14 LVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIYMH 93
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  94 VARGLYYG--SYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATL 171
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1632161153 172 TRFFAFHFLLPFVVAAATILHLLFLHETG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 797.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00131    5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00131   85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00131  165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00131  245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00131  325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
CYTB MTH00119
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 701.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00119    6 RKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00119   86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00119  166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00119  246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00119  326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLN 379
CYTB MTH00074
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 699.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00074    6 RKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00074   86 NGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00074  166 WGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00074  246 FSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQIL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00074  326 FWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
CYTB MTH00100
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 687.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00100    5 RKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00100   85 NGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00100  165 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00100  245 FSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00100  325 FWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
CYTB MTH00191
cytochrome b; Provisional
 1-364 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 661.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00191    2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00191   82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00191  162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00191  242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPL 364
Cdd:MTH00191  322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 7-361 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 622.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   7 MKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFF 86
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  87 FICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSV 166
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 167 DNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLALFSPNLL 246
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 247 GDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFCTLVA 326
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1632161153 327 DMIILTCIGGMPVEHPYIIIGQIASVLYFALFLIL 361
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00034
cytochrome b; Validated
 1-371 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 607.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00034    5 RKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00034   85 NGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00034  165 WGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00034  245 LFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIA 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENK 371
Cdd:MTH00034  325 FWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENK 375
CYTB MTH00145
cytochrome b; Provisional
 1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 590.72  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00145    6 RKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00145   86 NGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00145  166 WGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00145  246 FFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVL 325

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLIL 361
Cdd:MTH00145  326 FWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL 366
CYTB MTH00016
cytochrome b; Validated
 1-362 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 568.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00016    6 RKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00016   86 NGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00016  166 WGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00016  246 LWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQIL 325

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILT 362
Cdd:MTH00016  326 FWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINP 367
CYTB MTH00022
cytochrome b; Validated
 1-374 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 515.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00022    4 RKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00022   84 NGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWV 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00022  164 WGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVY 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00022  244 FAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMA 323

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00022  324 FWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 514.26  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00053    6 RKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00053   86 NGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00053  166 WGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVF 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00053  246 LFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKIL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFLILTPLAGCLENKALK 374
Cdd:MTH00053  326 FWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 1-374 2.99e-177

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 497.52  E-value: 2.99e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   1 RKTHPLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHA 80
Cdd:MTH00224    6 RTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  81 NGASFFFICIYMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCI 160
Cdd:MTH00224   86 NGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 161 CGGFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:MTH00224  166 WGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 241 FSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFL 320
Cdd:MTH00224  246 FEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1632161153 321 FCTLVADMIILTCIGGMPVEHPYIIIGQIASVLYFALFlILTPLAGCLENKALK 374
Cdd:MTH00224  326 FWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 12-370 9.79e-134

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 387.37  E-value: 9.79e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  12 DALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIY 91
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  92 MHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATL 171
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 172 TRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLALFS--PNLLGDP 249
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 250 ENFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFCTLVADMI 329
Cdd:MTH00033  253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1632161153 330 ILTCIGGMPV-EHPYIIIGQIASVLYFALFLILTPLAGCLEN 370
Cdd:MTH00033  333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
5-366 4.64e-119

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 350.24  E-value: 4.64e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   5 PLMKIANDALvDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGAS 84
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  85 FFFICIYMHVARGLYYGSYLYKETCN--IGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICG 162
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYKKPRELNwiIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 163 GFSVDNATLTRFFAFH-FLLPFVVAAATILHLLFLHETGSNNPAG----LNSDADKISFHPYFSYKDLLGFVMMLLALTS 237
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 238 LALFSPNllGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRP 315
Cdd:COG1290   258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1632161153 316 ITQFLFCTLVADMIILTCIGGMPVehPYIIIGQIASVLYFALFLILTPLAG 366
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
CYTB MTH00086
cytochrome b; Provisional
 11-361 8.02e-117

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 343.07  E-value: 8.02e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  11 NDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICI 90
Cdd:MTH00086    4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  91 YMHVARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNAT 170
Cdd:MTH00086   84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 171 LTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLaLTSLALFSPNLLGDPE 250
Cdd:MTH00086  164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLGDPE 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 251 NFTPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQrglTFRPITQFLFCTLVADMII 330
Cdd:MTH00086  243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1632161153 331 LTCIGGMPVEHPYIIIGQIASVLYFALFLIL 361
Cdd:MTH00086  320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-202 9.97e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 265.77  E-value: 9.97e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153   5 PLMKIANDALVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGAS 84
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  85 FFFICIYMHVARGLYYGSY--LYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICG 162
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1632161153 163 GFSVDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSN 202
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 14-360 1.99e-82

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 255.29  E-value: 1.99e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  14 LVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIYMH 93
Cdd:MTH00046    9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  94 VARGLYYGSYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATLTR 173
Cdd:MTH00046   89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 174 FFAFHFLLPFVVAAATILHLLFLHETGSNNPAGL-NSDADKISFHPYFSYKDLLGFVMMLLALTSLALFSPNLLGDPENF 252
Cdd:MTH00046  169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 253 TPANPLVTPPHIKPECYFLFAYAILRSIPNKLGGvLALLFSILVLMVVPilhtSKQRGLTFRPITQFLFCTLVADMIILT 332
Cdd:MTH00046  249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323

                         330       340
                  ....*....|....*....|....*...
gi 1632161153 333 CIGGMPVEHPYIIIGQIASVLYFALFLI 360
Cdd:MTH00046  324 YLGGCHPEYPYLLISQLFSVLMVLLLFI 351
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
14-200 1.70e-81

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 246.91  E-value: 1.70e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  14 LVDLPTPSNISACCNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIYMH 93
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  94 VARGLYYG--SYLYKETCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATL 171
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1632161153 172 TRFFAFHFLLPFVVAAATILHLLFLHETG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 203-350 2.55e-53

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 173.22  E-value: 2.55e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 203 NPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLALFSPNLLGDPENFTPANPLVTPPHIKPECYFLFAYAILRSIPN 282
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1632161153 283 KLGGVLALLFSILVLMVVPILHTSKQRGlTFRPITQFLFCTLVADMIILTCIGGMPVEHPYIIIGQIA 350
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
254-354 2.25e-46

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 153.79  E-value: 2.25e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 254 PANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFCTLVADMIILTC 333
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1632161153 334 IGGMPVEHPYIIIGQIASVLY 354
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
84-249 4.17e-46

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 155.48  E-value: 4.17e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  84 SFFFICIYMHVARGLYYGSYLYKETCN--IGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCIC 161
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRELNwiIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 162 GGFSVDNATLTRFFAFHF-LLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVMMLLALTSLAL 240
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1632161153 241 FSPNLLGDP 249
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 29-204 1.02e-33

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 124.82  E-value: 1.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  29 FGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIYMHVARGLYYGSYLYKET 108
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRE 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 109 CN--IGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATLTRFFAFH-FLLPFVV 185
Cdd:PRK03735  124 LNwvVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 1632161153 186 AAATILHLLFLHETGSNNP 204
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
petB CHL00070
cytochrome b6
 17-204 1.64e-25

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 102.49  E-value: 1.64e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  17 LPTPSNISACcnFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGCLIRNLHANGASFFFICIYMHVAR 96
Cdd:CHL00070   26 VPPHVNIFYC--LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153  97 GLYYGSYLYKE--TCNIGVVLLLLVMMTAFVGYVLPCGQMSFCGATVITNLLSAVPYMGDTLVQCICGGFSVDNATLTRF 174
Cdd:CHL00070  104 VYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1632161153 175 FAFH-FLLPFVVAAATILHLLFLHETGSNNP 204
Cdd:CHL00070  184 YSLHtFVLPLLTAVFMLMHFLMIRKQGISGP 214
petD CHL00058
cytochrome b6/f complex subunit IV
 235-326 9.06e-11

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 60.02  E-value: 9.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1632161153 235 LTSLALFSPNLLGDPenftpANPLVTPPHIKPECYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPIL-HTSKQRGLTF 313
Cdd:CHL00058   51 NVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFR 125

                          90
                  ....*....|....*
gi 1632161153 314 RPI--TQFLFCTLVA 326
Cdd:CHL00058  126 RPVatTVFLIGTAVA 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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