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Conserved domains on  [gi|1789851249|gb|QHB76502|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Hylomyscus alleni]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-601 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1047.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   1 MNMITSSILTIFIILCLPIFISMTNLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  81 KIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 161 RADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTN-NNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGP 239
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNpNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 240 TPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGIN 319
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 320 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESIN 399
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 400 ICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQIL 479
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 480 TMPLYLKFTALVVSILGFLIALELNNLTLKLYMSKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEK 559
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1789851249 560 SIPKSTSLIHTFTSKMLTSQKGMIKLYFLSFMITIILVIILY 601
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-601 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1047.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   1 MNMITSSILTIFIILCLPIFISMTNLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  81 KIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 161 RADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTN-NNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGP 239
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNpNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 240 TPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGIN 319
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 320 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESIN 399
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 400 ICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQIL 479
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 480 TMPLYLKFTALVVSILGFLIALELNNLTLKLYMSKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEK 559
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1789851249 560 SIPKSTSLIHTFTSKMLTSQKGMIKLYFLSFMITIILVIILY 601
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
8-600 1.59e-139

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 418.79  E-value: 1.59e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   8 ILTIFIILCLPIFISMTNLIKHMNFP-----LYATSSIKFSFFLSLvpLLLFIHQNTEYMITSWHWITINSINMTMNFKI 82
Cdd:COG1009     1 LQLLWLIPLLPLLGALLAGLLGRRLGrraagWLAALAPLAAFVLSL--LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  83 DYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRA 162
Cdd:COG1009    79 DGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 163 DANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILmTNNNNFIP-------LLGLLIAATGKSAQFGLHPWLPSA 235
Cdd:COG1009   159 SARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL-AAAPTILSsplltliLLLLLLGAFGKSAQFPLHFWLPDA 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 236 MEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVT 315
Cdd:COG1009   238 MEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 316 LGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSII 395
Cdd:COG1009   318 LGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAIL 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 396 ESINICNTNAWALLVTLVATS-MTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNN---- 470
Cdd:COG1009   397 EAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegl 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 471 IPPTNIQILTMPLY----LKFTALVVSILGFLIA--LELNNLTLKLYmSKIKPFSMFSTSLGFFPSILHRMIplksLDPS 544
Cdd:COG1009   477 LAPAAVLGGELHLAhgllLNALPLLLSLLGIALGylLYLKRPLPALA-ERLKPLYRLLANKWYFDELYDALF----VKPV 551
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 545 FKVSLGLLDLIWLEKSIPKSTSLIHTFTSKML-TSQKGMIKLYFLSFMITIILVIIL 600
Cdd:COG1009   552 RALARFLWFDRYVIDGIVNGLARLTLFSGRLLrRLQTGYLQFYALTILLGVVVLLLL 608
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
11-500 1.03e-128

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 391.26  E-value: 1.03e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  11 IFIILCLPIFISMTNL-----IKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITS--WHWITINSINMTMNFKID 83
Cdd:TIGR01974   3 IFLIVFLPLIGFLIAGlfgrrIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLD 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  84 YFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRAD 163
Cdd:TIGR01974  83 GLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 164 ANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLG-----LLIAATGKSAQFGLHPWLPSAMEG 238
Cdd:TIGR01974 163 ANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTlicllLFIGAMGKSAQLPLHTWLPDAMEG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 239 PTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGI 318
Cdd:TIGR01974 243 PTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGV 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 319 NQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESI 398
Cdd:TIGR01974 323 GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAA 402
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 399 NICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPP----- 473
Cdd:TIGR01974 403 FASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkgvl 482
                         490       500       510
                  ....*....|....*....|....*....|..
gi 1789851249 474 -----TNIQILTMPLYLKFTALVVSILGFLIA 500
Cdd:TIGR01974 483 ptsaePALEHHHVPALEIWSPTAVAILGILLA 514
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 1.02e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 190.22  E-value: 1.02e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMT------NNN 207
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 208 NFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLM-SSNNTILTIMMCLGALTTL 285
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 286 FTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIM 362
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1789851249 363 KIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIEsiNICNTNAWALLVTLVATS 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA--AAVAASWIFLVLAGVVGS 291
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-601 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1047.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   1 MNMITSSILTIFIILCLPIFISMTNLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  81 KIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 161 RADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTN-NNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGP 239
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNpNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 240 TPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGIN 319
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 320 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESIN 399
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 400 ICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQIL 479
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 480 TMPLYLKFTALVVSILGFLIALELNNLTLKLYMSKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEK 559
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1789851249 560 SIPKSTSLIHTFTSKMLTSQKGMIKLYFLSFMITIILVIILY 601
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
3-603 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 904.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   3 MITSSILTIFIILCLPIFISMTNLIKHMNFPL-YATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFK 81
Cdd:MTH00137    6 IMTSSLILIFALLIYPLLTTLSPNPQKPNWALtHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  82 IDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:MTH00137   86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 162 ADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNN--FIPLLGLLIAATGKSAQFGLHPWLPSAMEGP 239
Cdd:MTH00137  166 ADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFdlTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 240 TPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGIN 319
Cdd:MTH00137  246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 320 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESIN 399
Cdd:MTH00137  326 QPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN 405
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 400 ICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQIL 479
Cdd:MTH00137  406 TSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVM 485
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 480 TMPLYLKFTALVVSILGFLIALELNNLTLKLYmsKIKP---FSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIW 556
Cdd:MTH00137  486 TMPPLLKLAALIVTILGLLIALELASLTNKQF--KPTPtlpPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTW 563
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*...
gi 1789851249 557 LEKSIPKSTSLIHTFTSKMLT-SQKGMIKLYFLSFMITIILVIILYIT 603
Cdd:MTH00137  564 LEKTGPKGIASLQLPLITTTSnIQQGMIKTYLTLFLLTLALATLLLLL 611
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
3-601 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 871.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   3 MITSSILTIFIILCLPIFISMTnLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKI 82
Cdd:MTH00004    4 LLNTTTLLTLLILLTPILLPLL-SKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  83 DYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRA 162
Cdd:MTH00004   83 DQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 163 DANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPV 242
Cdd:MTH00004  163 EANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPV 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 243 SALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY 322
Cdd:MTH00004  243 SALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 323 LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICN 402
Cdd:MTH00004  323 LAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSY 402
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 403 TNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQILTMP 482
Cdd:MTH00004  403 LNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMP 482
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 483 LYLKFTALVVSILGFLIALELNNLTLKLYMSKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEKSIP 562
Cdd:MTH00004  483 TTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGP 562
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|
gi 1789851249 563 KSTSLIHTFTSKMLTS-QKGMIKLYFLSFMITIILVIILY 601
Cdd:MTH00004  563 KGLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLLLT 602
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
5-601 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 824.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   5 TSSILTIFIILcLPIFISMTNlikhmNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKIDY 84
Cdd:MTH00066    9 SSMILSLLLLI-LPLLLPKSN-----NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQ 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  85 FFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADA 164
Cdd:MTH00066   83 YSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 165 NTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSA 244
Cdd:MTH00066  163 NTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSA 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 245 LLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLA 324
Cdd:MTH00066  243 LLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLA 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 325 FLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTN 404
Cdd:MTH00066  323 FFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLN 402
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 405 AWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQILTMPLY 484
Cdd:MTH00066  403 SWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTF 482
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 485 LKFTALVVSILGFLIALELNNLTLKLYMSkiKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEKSIPKS 564
Cdd:MTH00066  483 MKLAALLVTLLGLLIALDLAKITSKTTPK--TKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKG 560
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 1789851249 565 -TSLIHTFTSKMLTSQKGMIKLYFLSFMITIILVIILY 601
Cdd:MTH00066  561 lTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
1-604 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 692.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   1 MNMITSSILTIFIILCLPIFISMtnlikhMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNF 80
Cdd:MTH00211    2 NTIFNSGFLLILILLLLPLLLPL------NNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  81 KIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00211   76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 161 RADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPT 240
Cdd:MTH00211  156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPT 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 241 PVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQ 320
Cdd:MTH00211  236 PVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 321 PYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINI 400
Cdd:MTH00211  316 PQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNG 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 401 CNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQILT 480
Cdd:MTH00211  396 SYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILS 475
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 481 MPLYLKFTALVVSILGFLIALELNNLTLKlymSKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEKS 560
Cdd:MTH00211  476 LPFLLKLMPLLVTIVGLLLGLELVNLTHK---QLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKL 552
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*
gi 1789851249 561 IPKSTSLIHTFTSKMLTS-QKGMIKLYFLSFMITIILVIILYITN 604
Cdd:MTH00211  553 GPKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFLLF 597
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
2-600 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 586.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   2 NMITSSILTIFIILCLPIFISMTNL-----------------IKHMNFPLYATSSIKFSFFLSLVPLLLFIHQN-TEYMI 63
Cdd:MTH00208    7 MIISSINLSIFIILLISIFFSSNLPnistsnaslggnnnnnsIINYNNSNFSISLLKTLAFLSLINLLIWILLGcPNINI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  64 TSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIG 143
Cdd:MTH00208   87 SLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIG 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 144 WEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNN----FIPLLGLLIAA 219
Cdd:MTH00208  167 WEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNSNsfliNILLFGILLAA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 220 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKK 299
Cdd:MTH00208  247 AGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKK 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 300 IIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLAL 379
Cdd:MTH00208  327 IIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLAL 406
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 380 TGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALG 459
Cdd:MTH00208  407 MGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIG 486
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 460 SILAGYVISNNIppTNIQILTMPLYLKFTALVVSILG-FLIALELNNLTLKLYMSKikpFSMFSTSLGFFPSILHRMIPL 538
Cdd:MTH00208  487 TIISGWFFSNFV--FNLPPLTLPLILKSLPLIVTIIGaAFSFSFLLSLSSNPINSN---FFSFLSNQWFFVNISHSIIIS 561
                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1789851249 539 KSLDPSFKVSLGLLDLIWLEKSIPKSTSLIHTFTSKML-TSQKGMIKLYFLSFMITIILVIIL 600
Cdd:MTH00208  562 FSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYqLTQTGYIKQYLLSSTLLFLLILTL 624
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
8-600 1.59e-139

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 418.79  E-value: 1.59e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   8 ILTIFIILCLPIFISMTNLIKHMNFP-----LYATSSIKFSFFLSLvpLLLFIHQNTEYMITSWHWITINSINMTMNFKI 82
Cdd:COG1009     1 LQLLWLIPLLPLLGALLAGLLGRRLGrraagWLAALAPLAAFVLSL--LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  83 DYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRA 162
Cdd:COG1009    79 DGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 163 DANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILmTNNNNFIP-------LLGLLIAATGKSAQFGLHPWLPSA 235
Cdd:COG1009   159 SARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL-AAAPTILSsplltliLLLLLLGAFGKSAQFPLHFWLPDA 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 236 MEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVT 315
Cdd:COG1009   238 MEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 316 LGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSII 395
Cdd:COG1009   318 LGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAIL 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 396 ESINICNTNAWALLVTLVATS-MTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNN---- 470
Cdd:COG1009   397 EAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegl 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 471 IPPTNIQILTMPLY----LKFTALVVSILGFLIA--LELNNLTLKLYmSKIKPFSMFSTSLGFFPSILHRMIplksLDPS 544
Cdd:COG1009   477 LAPAAVLGGELHLAhgllLNALPLLLSLLGIALGylLYLKRPLPALA-ERLKPLYRLLANKWYFDELYDALF----VKPV 551
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 545 FKVSLGLLDLIWLEKSIPKSTSLIHTFTSKML-TSQKGMIKLYFLSFMITIILVIIL 600
Cdd:COG1009   552 RALARFLWFDRYVIDGIVNGLARLTLFSGRLLrRLQTGYLQFYALTILLGVVVLLLL 608
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
36-500 4.66e-132

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 400.30  E-value: 4.66e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  36 ATSSIKFSFFLSLVPLLLFIHQNTE-YMITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHI 114
Cdd:PRK06590   35 GTGLVGLSALLSLVVFFDFLLGGGRaFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGY 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 115 NRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMN 194
Cdd:PRK06590  115 RRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFG 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 195 SWELQQIL------MTNNNNFIPLLG--LLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM 266
Cdd:PRK06590  195 SLNYDEVFaaapqfFGLGWSALTLICllLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLF 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 267 SSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSII 346
Cdd:PRK06590  275 ELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVI 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 347 HNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINIcNTNAWALLVTLVATSMTAMYSMRII 426
Cdd:PRK06590  355 HAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFA-NGHINLFVAGLVGAFLTAFYSFRLI 433
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 427 YFVAMTKPRYP-------------PMIIinennpnlinpikrLALGSILAGYVISNN------IPPTNIQI---LTMPLY 484
Cdd:PRK06590  434 FLVFHGKEKEKihhphespavmtlPLIV--------------LAVLSVFAGALIVPPflgvlpLTTELAHGeaeHHLPVW 499
                         490
                  ....*....|....*.
gi 1789851249 485 LKFTALVVSILGFLIA 500
Cdd:PRK06590  500 VALLPLVVALAGIALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
11-500 1.03e-128

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 391.26  E-value: 1.03e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  11 IFIILCLPIFISMTNL-----IKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITS--WHWITINSINMTMNFKID 83
Cdd:TIGR01974   3 IFLIVFLPLIGFLIAGlfgrrIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLD 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  84 YFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRAD 163
Cdd:TIGR01974  83 GLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 164 ANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLG-----LLIAATGKSAQFGLHPWLPSAMEG 238
Cdd:TIGR01974 163 ANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTlicllLFIGAMGKSAQLPLHTWLPDAMEG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 239 PTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGI 318
Cdd:TIGR01974 243 PTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGV 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 319 NQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESI 398
Cdd:TIGR01974 323 GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAA 402
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 399 NICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPP----- 473
Cdd:TIGR01974 403 FASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkgvl 482
                         490       500       510
                  ....*....|....*....|....*....|..
gi 1789851249 474 -----TNIQILTMPLYLKFTALVVSILGFLIA 500
Cdd:TIGR01974 483 ptsaePALEHHHVPALEIWSPTAVAILGILLA 514
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
42-602 5.11e-115

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 354.15  E-value: 5.11e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  42 FSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYL 121
Cdd:MTH00151   12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 122 MMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVgFILAMTWFCLNMNSWelqQI 201
Cdd:MTH00151   92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGDV-LILLSIALLVLLGHW---SI 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 202 LMTNNNNFIPLLGLLI--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCL 279
Cdd:MTH00151  167 LSMWDFKLSGWLGLLLvlAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFI 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 280 GALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMG 359
Cdd:MTH00151  247 SLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLG 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 360 GIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPM 439
Cdd:MTH00151  327 SLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSL 406
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 440 IIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQILtMPLYLKFTALVVSILGFLIAleLNNLTLKLYMSKIKPFS 519
Cdd:MTH00151  407 SSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFF-LPSYLKLLIGFVILLGLFLS--FGFWDSGFSSSKMVKLS 483
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 520 MFSTSLGFFPSILHRmiPLKSLDP-SFKVSLGLLDLIWLEKSIPKSTSLIhtFTSKMLTSQKGMIKLYFLSFMITIILVI 598
Cdd:MTH00151  484 FFFSSMWFLSPLSSQ--PLKSLSLkLSNSSMKSLDMGWLEILGGQGVFKA--NKSFSVLNESWPVKWFNFFIGLILLLVL 559

                  ....
gi 1789851249 599 ILYI 602
Cdd:MTH00151  560 FLVV 563
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
66-503 2.49e-114

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 354.00  E-value: 2.49e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  66 WHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWE 145
Cdd:MTH00020   62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 146 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAM-----TWFCLNMNSWELQQILMTNNNNFIPLLGLLIAAT 220
Cdd:MTH00020  142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMfllwdRFGSLDFSSVFNMVVSAPSSDITLICLFLFIGAV 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 221 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKI 300
Cdd:MTH00020  222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 301 IAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALT 380
Cdd:MTH00020  302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 381 GMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIY--FVAMTKPRYPPMIIINENNPNLINPIKRLAL 458
Cdd:MTH00020  382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYltFLSNTNLKKAVFFHLHEGDWNLLLPLGILAL 461
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1789851249 459 GSILAGYVISNNIPPTNIQILTM-PLYLKFTALVVSILGFLIALEL 503
Cdd:MTH00020  462 GSIFVGYLAKEMIWSFQITLPPIvPLSIKLLPVFLSLGGIGLVIIL 507
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
42-602 4.37e-114

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 352.14  E-value: 4.37e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  42 FSFFLSLVPLLLFIHQNTEYMItSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYL 121
Cdd:MTH00165   13 FLSLILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 122 MMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVGFILAMTWFcLNMNSWEL--- 198
Cdd:MTH00165   92 LLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWM-MNFGSWNFify 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 199 QQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNtILTIMMC 278
Cdd:MTH00165  170 LDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSF-FSKFLLL 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 279 LGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKM 358
Cdd:MTH00165  249 ISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFM 328
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 359 GGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPP 438
Cdd:MTH00165  329 GGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKS 408
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 439 MIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQILtMPLYLKFTALVVSILGFLIALELNNLTLKLYMSKIK-- 516
Cdd:MTH00165  409 LNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMIC-LPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKny 487
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 517 PFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLgLLDLIWLEKSIPKSTSLIHTFTSKMLTS-QKGMIKLYFLSFMITII 595
Cdd:MTH00165  488 KLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLK-SFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMI 566

                  ....*..
gi 1789851249 596 LVIILYI 602
Cdd:MTH00165  567 ILLLLFL 573
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
66-599 2.56e-112

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 348.92  E-value: 2.56e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  66 WHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWE 145
Cdd:MTH00210   62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 146 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWE---LQQILMTNNNN----FIPLLgLLIA 218
Cdd:MTH00210  142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEfstISSLLVTNINKesltIICLL-LFIG 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 219 ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVK 298
Cdd:MTH00210  221 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLK 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 299 KIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLA 378
Cdd:MTH00210  301 KVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLS 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 379 LTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIIN--ENNPNLINPIKRL 456
Cdd:MTH00210  381 LMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLL 460
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 457 ALGSILAGY-----VISNNIPPtniqilTMPLYLKFTALVVSILGFLIALELNNLTLKLYMSKIKPFSM--------FST 523
Cdd:MTH00210  461 AFGSIFVGYlgkevVLSNVIPP------IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIrlyhviytFLN 534
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 524 SLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEKSIPKSTS-LIHTFTSKMLTSQKGMIKLYFLSFMITIILVII 599
Cdd:MTH00210  535 SAWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISkVLIKLTQKISNLQSGMVFNYALIMIIFTTLFIS 611
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
38-599 2.99e-106

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 331.73  E-value: 2.99e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  38 SSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRF 117
Cdd:MTH00207   11 SYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRF 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 118 IKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVGFILAMTWfCLNMNSWE 197
Cdd:MTH00207   91 ISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQGHWS 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 198 LQQILMTNNNNFIpLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMM 277
Cdd:MTH00207  169 ITNMWQTDMNNYI-ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALL 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 278 CLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRK 357
Cdd:MTH00207  248 LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRT 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 358 MGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYP 437
Cdd:MTH00207  328 MGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSS 407
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 438 PMIIINENNPNLINPIKRLALGSILAGYVIsNNIPPTNIQILTMPLYLKFTALVVSILGFLIALelnnLTLKLYMSKiKP 517
Cdd:MTH00207  408 PYHHLEDEDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPILPLQYKLLPLLVVTLGALLAW----LFTTPNITK-TP 481
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 518 FSMFSTSLGFFPSILHRMIPLKS---LDPSFKVS---LGLLDLIWLEKSIPKSTS-LIHTFTSKMLTSQK-GMIKLYFLS 589
Cdd:MTH00207  482 LLINNPLSHFASCLMWFLVPLSSqfiMSTPMNLShnyLKLLDQGWLEMLGAQGTFkMFSRSSNNVMKLQKnIPNNYLMMS 561
                         570
                  ....*....|
gi 1789851249 590 FMITIILVII 599
Cdd:MTH00207  562 FVLLTIIIIM 571
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
32-600 2.21e-100

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 316.20  E-value: 2.21e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  32 FPLYATSSIKFSFFLSLVPLLLFIHQNTEYmITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSD 111
Cdd:MTH00209    1 FKKMQMFSLMLLFLFSFLMFVIFMWFQKIV-ILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 112 YHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVGFILAMTWFcL 191
Cdd:MTH00209   80 KFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWM-L 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 192 NMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNT 271
Cdd:MTH00209  158 MHGNWNIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 272 ILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLND 351
Cdd:MTH00209  238 FSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGH 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 352 EQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYFVAM 431
Cdd:MTH00209  318 SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLW 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 432 TKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPtNIQILTMPLYLKFTALVVSILGFLIALELNNLTLKLY 511
Cdd:MTH00209  398 GPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVP-SVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLI 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 512 msKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSfKVSLGLLDLIWLEKSIPKST-SLIHTFTSKMLTSQKGMIKLYFLSF 590
Cdd:MTH00209  477 --KGYKVNYFLSQMWFLPDLSSQPVNKFTMKLS-KTMLKLLDQGWVEKMSGQGSfKVLKKSSKLSQIIQNNSLKLFVTFM 553
                         570
                  ....*....|
gi 1789851249 591 MITIILVIIL 600
Cdd:MTH00209  554 MLILLGVILF 563
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
56-428 5.64e-90

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 292.31  E-value: 5.64e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  56 HQNTEYMITswhWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSAN 135
Cdd:PRK07376   66 HEPYERLFE---WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISP 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 136 NLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL-----MTNNNNFI 210
Cdd:PRK07376  143 NLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIAdrlseLVSSGAVS 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 211 PLLGLLIA------ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTT 284
Cdd:PRK07376  223 GWLALLLCilvflgPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITA 302
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 285 LFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLND--------EQDIR 356
Cdd:PRK07376  303 FLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMR 382
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1789851249 357 KMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWalLVTLVATSMTAMYSMRiIYF 428
Cdd:PRK07376  383 LMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFR-MYF 451
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
103-601 3.26e-85

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 279.54  E-value: 3.26e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 103 FSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGF 182
Cdd:MTH00032   99 YSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGV 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 183 ILAMTWFCLNMNSWELQQI-------------LMTNNNNFIPL-------LGLLIAATGKSAQFGLHPWLPSAMEGPTPV 242
Cdd:MTH00032  179 ILGMVLIYKTIGSLDFLTFnggsvgsgimdrgYYGGGAYESPLapfaiigILLLIGCIGKSAQLGLHTWLPDAMEGPTPV 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 243 SALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY 322
Cdd:MTH00032  259 SALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSH 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 323 -LAFLHICTHAFFKAMLFMCSGSIIHNLN-DEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINI 400
Cdd:MTH00032  339 nVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYS 418
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 401 CNT------------------------------------NAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINE 444
Cdd:MTH00032  419 GRNmgipfgssllkiqgdigikkddrgsiggpegypsrgSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISS 498
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 445 N----NPNLINPIKRLALGSILAGYVIsNNIPPTNIQILTMPLYLKFTALVVSILGFLIALELNNLTLKLYM-------- 512
Cdd:MTH00032  499 HinivDKRVLTVLSLLCFGAIFVGYLI-QDILIGDIEHPIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELywgfdpig 577
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 513 -SKIKPFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLGLLDLIWLEKSIPKSTSLIHTFTSKMLTS-QKGMIKLYFLSF 590
Cdd:MTH00032  578 pSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVL 657
                         570
                  ....*....|.
gi 1789851249 591 MITIILVIILY 601
Cdd:MTH00032  658 LSFTIIFLALW 668
ndhF CHL00025
NADH dehydrogenase subunit 5
13-395 5.75e-67

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 232.09  E-value: 5.75e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  13 IILCLPIFISMTNLIKHMNFP--------LYATSSIKFSFFLSLVPLLLFIHQNTEYMI--TSWHWITINSINMTMNFKI 82
Cdd:CHL00025   10 IIPFLPLPVPMLIGLGLLLFPtatknlrrMWAFPSILLLSIVMIFSLNLSIQQINGSSIyqYLWSWTINNDFSLEFGYLI 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  83 D----YFFILFLSVALYVtwsiMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWW 158
Cdd:CHL00025   90 DpltsIMLILITTVGILV----LIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 159 YGRADANTAALQAILYNRIGDVGF---ILAMTWFCLNMNSWELQQIL--MTNNNNFIPLLGLLIA------ATGKSAQFG 227
Cdd:CHL00025  166 FTRPIAANACQKAFVTNRVGDFGLllgILGFYWITGSFEFRDLFEIFnnLIYNNEVNLLFATLCAfllflgPVAKSAQFP 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 228 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSS 307
Cdd:CHL00025  246 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMS 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 308 QLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGIMKIMPFTSSCLIIGSLAL 379
Cdd:CHL00025  326 QLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSL 405
                         410
                  ....*....|....*.
gi 1789851249 380 TGMPFLTGFYSKDSII 395
Cdd:CHL00025  406 CGIPPLACFWSKDEIL 421
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
41-434 5.37e-64

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 224.41  E-value: 5.37e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  41 KFSFFLSLVPLLLFIH--------QNTEYMITSWHWITinSINMTMNFKIDYFFILFlsvALYVT---WSIMQFSSWYMH 109
Cdd:PRK12647   15 NAGWLLALLPLALFLYflsfipeiAAGETVRGGYAWVP--SLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLK 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 110 SDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGD----VGFILa 185
Cdd:PRK12647   90 GHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGlallAGLIL- 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 186 mtwfcLNM--NSWELQQIL-----MTNNNNFIPLLGL-LIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 257
Cdd:PRK12647  169 -----LGNvtGTYSLSELLasgdvIREHPLYLAILLLvLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIY 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 258 LLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYL---AFLHICTHAFF 334
Cdd:PRK12647  244 LLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLY 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 335 KAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVA 414
Cdd:PRK12647  324 KGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
                         410       420
                  ....*....|....*....|
gi 1789851249 415 TSMTAMysMRIIYFVAMTKP 434
Cdd:PRK12647  401 VLGNAL--MVAVAFLVGIKP 418
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
37-435 3.01e-58

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 208.93  E-value: 3.01e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  37 TSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSIN----MTMNF--KIDYFFILFLSVALYVTWSIMQFSSWYMHS 110
Cdd:TIGR00940  22 DQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDwvpeLGLNFtlYMDGLALLFSLLITGIGVLVVLYSIYYLSK 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 111 DYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFC 190
Cdd:TIGR00940 102 EEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLG 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 191 LNMNSWELQQIL-----MTNNNNFIPLLGL-LIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHP 264
Cdd:TIGR00940 182 KITGSFSIDAVIasadaIRNSPLFGTAMVLvLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTP 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 265 LMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYL----------------AFLHI 328
Cdd:TIGR00940 262 VFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHL 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 329 CTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIES------INICN 402
Cdd:TIGR00940 342 INHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEaitahlVNPFD 420
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1789851249 403 TNAWALL---VTLVATSMTAMYSMRIIYFVAMTKPR 435
Cdd:TIGR00940 421 TVTLGYLfpyVATVASVFTFVYSLRFIHGVFFGRPK 456
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
65-429 2.76e-57

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 207.73  E-value: 2.76e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  65 SWHWITinSINMTMNFKIDYFFILF--------LSVALYvtwsimqfSSWYMHSDYHINRFIKYLMMFLITMLILTSANN 136
Cdd:PRK12648   59 EIEWLP--ALGLNLSLRLDGLAWLFallilgigLLVVLY--------ARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGN 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 137 LFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILynrigdvgfILAMTWFCL--------NM-NSWELQQIL----- 202
Cdd:PRK12648  129 LILLVVFWELTSLSSFLLIGYWHHRADARRGARMALT---------VTGAGGLALlagvlllgHIvGSYDLDVVLaagdl 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 203 MTNNNNFIPLLGL-LIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGA 281
Cdd:PRK12648  200 IRAHPLYPPALVLiLLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGL 279
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 282 LTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHnlndE---QDI 355
Cdd:PRK12648  280 ITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDM 355
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1789851249 356 RKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSII-ESINICNTNAWALLVTLVATSMTAM---YSMRIIYFV 429
Cdd:PRK12648  356 RRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATLAGAFsvaYSLRFIHDV 433
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 1.02e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 190.22  E-value: 1.02e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMT------NNN 207
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 208 NFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLM-SSNNTILTIMMCLGALTTL 285
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 286 FTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIM 362
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1789851249 363 KIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIEsiNICNTNAWALLVTLVATS 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA--AAVAASWIFLVLAGVVGS 291
PRK12650 PRK12650
DUF4040 family protein;
65-468 1.21e-55

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 203.35  E-value: 1.21e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  65 SWH--WIT---INSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFikYLMM--FLITMLILTSANNL 137
Cdd:PRK12650   55 TWSvtWIPdllGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSF--YLLMtaFMAAMLLLVLADDV 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 138 FQLFIGWEGVGIMSFLLIGwwYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILM----TNNNNFIPLL 213
Cdd:PRK12650  133 VVLFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHsdvwAEKPGLTTVV 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 214 GLLIA--ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICA 291
Cdd:PRK12650  211 AVLIAvaAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFA 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 292 LTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFT 368
Cdd:PRK12650  291 VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFT 369
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 369 SSCLIIGSLALTGMPFLTGFYSKDSIIESIN---ICNTNAWALLVTLVATSM-TAMYSMRIIYFVAMTKPRypPMIIINE 444
Cdd:PRK12650  370 FVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapGGNAGVVLLLVGAALGAVfTFAYSARLVLGAFVDGPR--DMSHVKE 447
                         410       420
                  ....*....|....*....|....
gi 1789851249 445 NNPNLINPIKRLALGSILAGYVIS 468
Cdd:PRK12650  448 APVSLWLPAALPGALSLPLGLVPG 471
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
46-464 5.12e-52

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 192.45  E-value: 5.12e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  46 LSLVPLLLFIhqnteYMITSW-----------HWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDY-H 113
Cdd:PRK12644   30 LALVPAAAFV-----WVLAQWpavlaggapteVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEpR 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 114 INRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGD----VGFIL----A 185
Cdd:PRK12644  105 LGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGlamlVGIIIlgqaA 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 186 MTWfclnmnswELQQILmtNNNNFIPLLG-----LLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLI 260
Cdd:PRK12644  185 GTY--------RLSELL--ADPPTGPAVSvavvlILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVA 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 261 RFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQP--YLAFLH-ICTHAFFKAM 337
Cdd:PRK12644  255 RLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAGLAmLLAHALFKAA 334
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 338 LFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTsscLIIGSLALTGM---PFLTGFYSKDSIIESI---NICNTNAWALLVT 411
Cdd:PRK12644  335 LFLVVGIIDHSTG-TRDIRKLSGLGRRQPVL---AVVAALAAASMaglPPLLGFVAKEAALEAVlhdGALGPAGPVVLAG 410
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 412 LVATSM-TAMYSMRIIYFVAMTKPRYPPMIIINENN---PNLINPIKRLALGSILAG 464
Cdd:PRK12644  411 IVLGSIlTVAYSLRFLWGAFARKPGAFPSVAVTEMHrpsPLFLAPPAVLAVLGLVLG 467
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
37-427 1.08e-51

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 190.52  E-value: 1.08e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  37 TSSIKFSFFLSLVPLLLFIH--------QNTEYMITSWHWITinSINMTMNFKIDYFFILFLSV-----ALYVTWSIMQF 103
Cdd:PRK12645   25 FKRIHTGWFVLPVPVVLFIYflslipttMSGNTVMKTLPWIP--SLGINFTLYVDGLSLLFALLitgigSLVVLYSIYYL 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 104 SSwymhSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDV--- 180
Cdd:PRK12645  103 SK----KKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsml 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 181 -GFIL--AMTwfclnmNSWELQQI-----LMTNNNNFIPLLGL-LIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 251
Cdd:PRK12645  179 gGFILlyIMT------GSFSIREMianadEIQNSPLFIPAMILiLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATM 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 252 VVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGI-----------NQ 320
Cdd:PRK12645  253 VKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddSK 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 321 PYL-----AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSII 395
Cdd:PRK12645  333 IYAaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFF 411
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 1789851249 396 ES------INICNTNAWALL---VTLVATSMTAMYSMRIIY 427
Cdd:PRK12645  412 ESmlnateANLFSLDTWGVLfpvIAWVASVFTFVYSIIFIF 452
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
80-430 1.11e-51

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 183.42  E-value: 1.11e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWwY 159
Cdd:COG0651    72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL-G 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 160 GRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQI--LMTNNNNFIPLLGLLIAATG---KSAQFGLHPWLPS 234
Cdd:COG0651   151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaaRLAELDPGLLLAAFALLLVGfgiKAALFPLHFWLPD 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 235 AM-EGPTPVSALLhSSTMVVAGIFLLIRFHPLM---SSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLG 310
Cdd:COG0651   231 AYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 311 LMMVTLGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTG 387
Cdd:COG0651   310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1789851249 388 FYSKDSIIESinICNTNAWALLVTLVATS-MTAMYSMRIIYFVA 430
Cdd:COG0651   389 FVSKWLLLQA--ALEAGAWLLAAVLLLSSlLTLAYFVRIFGRAQ 430
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
40-428 8.24e-49

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 178.19  E-value: 8.24e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  40 IKFSFFLSLVPLLLFIHQNTEYMITSWHWItinsinmtmNFKIDYFF--ILFLSVALYVTWSIMQFSSWYMHSDYHINRF 117
Cdd:MTH00095    8 ILFFFFFLLLFILFLPFMKLNLFFLEWDFL---------SLKFNFYFnsLLFSLILLLVTLSVLVFSSYYMNGELNFNYF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 118 IKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVgFILAMTWFCLNMNSWE 197
Cdd:MTH00095   79 YFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV-LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYF 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 198 LQQILMTNNNNFIpllgLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHpLMSSNNTILTIMM 277
Cdd:MTH00095  157 FSFSFFSSSMILM----LLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFS-YLILNMNVMKIML 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 278 CLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRK 357
Cdd:MTH00095  232 LIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRN 311
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1789851249 358 MGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMRIIYF 428
Cdd:MTH00095  312 YSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKS 382
PRK12646 PRK12646
DUF4040 family protein;
60-398 1.53e-48

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 181.49  E-value: 1.53e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  60 EYMITSWHWITINSINMtmNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDY-HINRFIKYLMMFLITMLILTSANNLF 138
Cdd:PRK12646   56 QYLSTSIPWMKTLDINL--DLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTI 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 139 QLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGD----VGFILAMTWFCLNMNSWELQQI-LMTNNNNFIP-L 212
Cdd:PRK12646  134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQAdHIKNHGLFIPmI 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 213 LGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICAL 292
Cdd:PRK12646  214 FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITAL 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 293 TQNDVKKIIAFSTSSQLGLMMVTLGINQPYL-----------------AFLHICTHAFFKAMLFMCSGSIIHNlNDEQDI 355
Cdd:PRK12646  294 KQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDI 372
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1789851249 356 RKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESI 398
Cdd:PRK12646  373 RILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAL 415
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
115-415 7.11e-48

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 174.39  E-value: 7.11e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 115 NRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWwYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMN 194
Cdd:PRK06525  113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 195 SWELQQI-LMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpLMSSNN--- 270
Cdd:PRK06525  192 TFALSALsGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPiph 269
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 271 TILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTL--GINQPYLAF----LHICTHAFFKAMLFMCSGS 344
Cdd:PRK06525  270 VIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGA 349
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1789851249 345 IIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLVAT 415
Cdd:PRK06525  350 LSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
1-426 4.08e-47

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 177.33  E-value: 4.08e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   1 MNMITSSILTIFIILCLPIFISMTNLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWhwitINSINMTMNF 80
Cdd:PRK12649    1 MDSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPEVIHGTIITGSISW----LPSAGVEFSI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  81 KIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:PRK12649   77 YADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRH 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 161 RADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL----MTNNNN-----FIPLLGLLIAATGKSAQFGLHPW 231
Cdd:PRK12649  157 RPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILqdseLIENIKghplfLITLILIFIGAAAKSAQGPFYIW 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 232 LPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGL 311
Cdd:PRK12649  237 LPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAY 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 312 MMVTLGI---NQPYLAF----LHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPF 384
Cdd:PRK12649  317 LMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 1789851249 385 LTGFYSKDSIIES---INICNTNAWALLVTLVATS---MTAMYSMRII 426
Cdd:PRK12649  396 LNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
42-434 1.63e-45

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 170.48  E-value: 1.63e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  42 FSFFLSLVPLLLFIHQNTEYMitSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYL 121
Cdd:PRK07390   49 LAFVHSLLALRAIWNQPPQQL--SFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALL 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 122 MMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGF---ILAMTWFCLNMNSWEL 198
Cdd:PRK07390  127 GFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLlmgVVALSPLAGTLNFSDL 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 199 QQILMTNNNN--FIPLLGL-LIAA-TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFHPLMSSNNTILT 274
Cdd:PRK07390  207 AAWAATANLDplTATLLGLaLIAGpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALT 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 275 IMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDeQD 354
Cdd:PRK07390  286 VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QD 364
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 355 IRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIEsiNICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKP 434
Cdd:PRK07390  365 LTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLAD--GLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKP 442
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-464 1.71e-41

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 156.96  E-value: 1.71e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWsimqFSSWYMHS--DYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK08375   73 LRADSLSALFLLVTSILAI----AALLYAIGygEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 158 wYGRADANTAALQAILYNRIGD------VGFILAMTWFcLNMNswELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPW 231
Cdd:PRK08375  149 -GGDRRALAAARKYLIVGLIGStflligVGLLYGVTGT-LNMA--DLAGALAENPTVVTAFGFVLLALALKAAVFPLHTW 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 232 LPSAMEGPTPVSALLHSSTMVVAGIFLLIR-----FHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTS 306
Cdd:PRK08375  225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 307 SQLGLMMVTLGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMP 383
Cdd:PRK08375  305 SQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 384 FLTGFYSKDSIIESINicNTNAWALLVTLVATSM-TAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSIL 462
Cdd:PRK08375  384 PTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLL 461

                  ..
gi 1789851249 463 AG 464
Cdd:PRK08375  462 LG 463
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
421-600 3.77e-39

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 141.92  E-value: 3.77e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 421 YSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLALGSILAGYVISNNIPPTNIQIlTMPLYLKFTALVVSILGFLIA 500
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMM-TMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 501 LELNNLTLKLYMSKIK-PFSMFSTSLGFFPSILHRMIPLKSLDPSFKVSLgLLDLIWLEKSIPKSTSLIHTFTSKMLT-S 578
Cdd:pfam06455  80 LELSNLSNKQLKKSLNfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAK-QIDQGWSEKFGPQGIAKTLMTLSKIIQnS 158
                         170       180
                  ....*....|....*....|..
gi 1789851249 579 QKGMIKLYFLSFMITIILVIIL 600
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLL 180
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
100-436 1.21e-34

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 137.80  E-value: 1.21e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 100 IMQFSSWYM-HSDYHINRFIKYLMMFL-ITMLILTSanNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRI 177
Cdd:PRK12667   98 ILIYSYWYLeHESGPEWYYTLLLGLEAgMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAV 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 178 GDVGFILAM-----TWFCLNM-----NSWELQQILMTNNNNFIPLLGLLIAA------TGKSAQFGLHPWLPSAM-EGPT 240
Cdd:PRK12667  176 GTTLYFLALaflyaTFGTLNMadlsaKIRGLSFPLTGGLAGNPPLALGVALAlalwafTIKAAIFPNHFWLPDAHpAAPS 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 241 PVSALLhSSTMVVAGIFLLIRF--------HPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLM 312
Cdd:PRK12667  256 PVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYI 334
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 313 MVTLGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFY 389
Cdd:PRK12667  335 FMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFF 413
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1789851249 390 SKDSIIESINICNTnAWALLVTLVATSMTAMYSMRIIYFVAMTKPRY 436
Cdd:PRK12667  414 SKLLLFNALLESGF-YLPALVLLIASAISLVGYFRAWYSLFFGKPKS 459
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
43-346 2.40e-31

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 127.89  E-value: 2.40e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  43 SFFLSLVPLLLFihqNTEYMITSWHWITINSINMTMnfkidyffilfLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLM 122
Cdd:PRK08168   42 GLFLALLGLVLF---ATGAAWPAAAWLEVSGLGLVM-----------AALVQLLGWVIGRFSHRYLQGEPGQRRYVRALA 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 123 MFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWEL---- 198
Cdd:PRK08168  108 GVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLsalw 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 199 QQILMTNNNNFIPLLGLLI--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGiFLLIRFHPLMSSNNTILTIM 276
Cdd:PRK08168  188 AHLAAQGASPSLQAAALLLvlAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGG-FVLIRFAPLLEQAPPARWLL 266
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 277 MCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSII 346
Cdd:PRK08168  267 VLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
65-424 4.53e-29

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 121.52  E-value: 4.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  65 SWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGW 144
Cdd:MTH00063   26 SLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFW 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 145 EGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLnmnswelqqilMTNNNNFIPLLGLLIAATgKSA 224
Cdd:MTH00063  106 EYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCW-----------GGSGSFLCCLFFFLIVFT-KSA 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 225 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILtIMMCLGALTTLFTAICALTQNDVKKIIAFS 304
Cdd:MTH00063  173 SFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSI-FFSVLLLLTIFITGVSSLFFSDLKKIVALS 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 305 TSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR-----KMGGIMKImpFTSSCLIIGslaL 379
Cdd:MTH00063  252 TCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSWNL--FYLFLLVLG---L 326
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1789851249 380 TGMPFLTGFYSKDSIIESINICNTNAWALLVTLVATSMTAMYSMR 424
Cdd:MTH00063  327 SGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
121-424 8.74e-28

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 117.10  E-value: 8.74e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 121 LMMFLITMLILT-SANNLFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSW--- 196
Cdd:COG1008   116 LLLLLEAGMIGVfLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfd 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 197 --ELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFH----PLMSSn 269
Cdd:COG1008   195 iaELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFAlplfPEASA- 272
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 270 nTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMV------TLGINQpylAFLHICTHAFFKAMLFMCSG 343
Cdd:COG1008   273 -YFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVG 348
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 344 SIIHNLNDeQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVATSMTAMYSM 423
Cdd:COG1008   349 VLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLG--AFQVNPWLAILAALGLILTAAYLL 425

                  .
gi 1789851249 424 R 424
Cdd:COG1008   426 W 426
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
68-467 2.99e-27

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 115.68  E-value: 2.99e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  68 WITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYhINRFIKYLMMFLITMLILTSAN---NLFQLFIGW 144
Cdd:PRK06589   67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINN-IDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCY 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 145 EGVGIMSFLLIGwwYGRADANTAALQ---AILYNRiGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATG 221
Cdd:PRK06589  146 ELLTISTAFLIG--HTRNNISLSGGYkylKILMIS-ALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIA 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 222 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhPLMSSNNTILTIMMCLG-------ALTTLFTAICALTQ 294
Cdd:PRK06589  223 KTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKI-LLYIFGLSYLQRIFAEFnwlifipIVSIFYSSLKALKT 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 295 NDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIhNLNDEQDIRKMGGIMKIMPFTSSC 371
Cdd:PRK06589  302 DNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFI 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 372 LIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLV---ATSMTAMYSMRIIYFVamTKPRYPPMIIINENNPN 448
Cdd:PRK06589  381 ISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviaSSILSALYLLKILSSI--YKPSLSENSFITKSLPY 458
                         410
                  ....*....|....*....
gi 1789851249 449 LINPIKRLALGSILAGYVI 467
Cdd:PRK06589  459 LMQISVITCCCALTLFYFI 477
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
85-397 9.28e-27

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 115.21  E-value: 9.28e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  85 FFILFLS-----VALYVTWSIMQfsswyMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08667   81 FFIILIGlvslcVAIYSLGYNEH-----MSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDY 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 160 GRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEG- 238
Cdd:PRK08667  156 QEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAs 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 239 PTPVSALLhSSTMVVAGIFLLIRF-----HPLMSSNNTILTimmcLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMM 313
Cdd:PRK08667  236 PSNVSALM-SGVMLKVAVYGLVRFlmdvlSPELWWGVLILL----AGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 314 VTLGI-------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGIMKIMPFTSSCLIIGSLAL 379
Cdd:PRK08667  311 MGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSI 389
                         330
                  ....*....|....*...
gi 1789851249 380 TGMPFLTGFYSKDSIIES 397
Cdd:PRK08667  390 AALPPFNGFASELLLYES 407
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
123-391 1.42e-26

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 114.60  E-value: 1.42e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 123 MFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL 202
Cdd:PRK06521  121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 203 MTNNNNFIPLLGLLIAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FHPLMSSNNTILTIM 276
Cdd:PRK06521  201 AAHLSPFWASLVFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWWGVLV 279
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 277 MCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGI-------NQPYLAFL-------HICTHAFFKAMLFMCS 342
Cdd:PRK06521  280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGA 359
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1789851249 343 GSIIHNLNdEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSK 391
Cdd:PRK06521  360 GAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
5-383 3.17e-26

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 112.33  E-value: 3.17e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   5 TSSILTIFIILClPIFISMTnLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWItinsinmtmnFKIDY 84
Cdd:PRK06458    2 SYSILFALLLLI-PLLASLL-LFALRKRRLVATLNVLGITLTLILALWLVFTVPDAGEIFAAGLW----------FFIDD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  85 FFILFLSVALYVTWSIMQFSSWYMHSDYHINRF------IKYLM--MFLITMLILTSANNLFQLFIGWEGVGIMSFLLIG 156
Cdd:PRK06458   70 LNVFFLALIGVVGFLTSLYSIGYMRHEVEHGELspvtlrLYYGMyqLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVG 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 157 WwYGRADANTAALQAILynrIGDVGF-------IL--------------AMTWFCLNMNSWELQQILMTnnnnfIPLLGL 215
Cdd:PRK06458  150 I-YRTRASLEAAWKYII---ICSVGVafalfgtILvyanaatvmgdgemAILWTELLKHASLLDPTLMK-----LAFVFL 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 216 LIAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFHPLMSSNNTIL---TIMMCLGALTTLFTAICA 291
Cdd:PRK06458  221 LIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFFL 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 292 LTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLnDEQDIRKMGGIMKIMPFT 368
Cdd:PRK06458  300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLT 378
                         410
                  ....*....|....*
gi 1789851249 369 SSCLIIGSLALTGMP 383
Cdd:PRK06458  379 GWGLMLGALAIAGMP 393
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
134-429 3.56e-26

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 113.07  E-value: 3.56e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNN-NFIPL 212
Cdd:PRK12668  112 AGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTaAWLIL 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 213 LGLLIaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPlmssnNTILTIMMclGALTTLFTAICAL 292
Cdd:PRK12668  191 IGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-----GTELLIYI--GAAMAVYGVFFAL 259
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 293 TQNDVKKIIAFSTSSQLGLMMVTLGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTS 369
Cdd:PRK12668  260 LENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTA 338
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1789851249 370 SCLIIGSLALTGMPFLTGFYSKdSIIESINICNTNAWALLVTLVATSMTAMYS-MRIIYFV 429
Cdd:PRK12668  339 LFCLVGALSISAFPLFSGFVSK-SMIISAAGEDHYVWVWLLLLLASAGTFLHFgIKLPYFA 398
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-402 4.74e-26

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 112.11  E-value: 4.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376   86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 160 GRADANTAALQAILYNRIGDVGFILAMT-----WFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPS 234
Cdd:PRK08376  166 DTWEAIEAGIKYMFVGSLASSMVLLGIAllygqYGTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 235 AM-EGPTPVSALLHSSTmvVAGIFLLIR-----FHPLMSSNnTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQ 308
Cdd:PRK08376  246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsiYGPAINLA-TVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 309 LGLMMVTLGINQPYL---------------AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGIMKIMPFTSSCLI 373
Cdd:PRK08376  323 IGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFL 401
                         330       340
                  ....*....|....*....|....*....
gi 1789851249 374 IGSLALTGMPFLTGFYSKDSIIESINICN 402
Cdd:PRK08376  402 IGAAAIVGLPPFNGFASKWLIYESSALFN 430
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
134-427 3.11e-25

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 109.27  E-value: 3.11e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIGwwYGRAD-ANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTNNNNF-IP 211
Cdd:PRK07234  113 CADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFaLI 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 212 LLGLLIaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILTImmcLGALTTLFTAICA 291
Cdd:PRK07234  191 ALGLLV----KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFA 263
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 292 LTQNDVKKIIAFSTSSQLGLMMVTLGINqpylAFLHIcTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGIMKIMPftssc 371
Cdd:PRK07234  264 LLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP----- 332
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1789851249 372 LIIGSLALTGMPFLTGFYSKDSIIEsinicNTNAWALLVTLVATSMTAMYSMRIIY 427
Cdd:PRK07234  333 LTMASFSIAGFPLLAGFVSKVLTLK-----NLLPWQAIALNLAAVGTAASFWKFIF 383
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
119-429 3.45e-24

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 106.39  E-value: 3.45e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 119 KYLMMFLITMLILT---SANNLFQLFIGWEGVGIMSFLLIGWwYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNS 195
Cdd:PRK08377  109 KYAMLFLLLMLGATgmiATGDIFNLFVFMEITAITAYALTAY-NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGT 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 196 WELQQI--LMTNNNNFIPLLGLLIAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPLMSSN 269
Cdd:PRK08377  188 LNMAHIaqLAGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNA 266
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 270 N---TILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSG 343
Cdd:PRK08377  267 NgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG 346
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 344 SIIHNLNDEQdIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESiNICNTNAWALLVTLVATSMTAMYSM 423
Cdd:PRK08377  347 YVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILA-GLSAGYTWPVALVLGASVVEAVYYF 424

                  ....*.
gi 1789851249 424 RIIYFV 429
Cdd:PRK08377  425 RLIHTM 430
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
69-398 1.09e-22

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 102.38  E-value: 1.09e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  69 ITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFS-SWYMHSDYHINRFikYLMMFLITMLILTsANNLFQLFIGWEGV 147
Cdd:PRK08668   54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMvSEKTKNDAYFNMF--ALMSLAGVLGVFL-ANDLLTLYIFWEIM 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 148 GIMSFLLIgwWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQI----LMTNNNNFIPLLGLLIAATG-- 221
Cdd:PRK08668  131 TFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqglINDTSTGFALIVFLFLLAFGva 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 222 KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF------------HPLMSSNNTILTIMMCLGALTTLFTA 288
Cdd:PRK08668  209 KAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVlyvlpgtklfseFGTYRGVPLFNYILAWLGNISIIVGT 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 289 ICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGIMKIM 365
Cdd:PRK08668  288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKM 366
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1789851249 366 PFTSSCLIIGSLALTGMPFLTGFYSKDSIIESI 398
Cdd:PRK08668  367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
111-426 1.66e-21

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 97.97  E-value: 1.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 111 DYHINrfikyLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDVGFILAM---- 186
Cdd:PRK05846  112 FYMAA-----LLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIiylv 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 187 TWFCLNMNSWELQQILMTNNNNFIP---LLGLLIAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL---- 258
Cdd:PRK05846  186 VVYYNATGTFDIADLLNLPLPPGVQywlFLAFFIAFAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmga 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 259 --LIRF----HPLMSSNntILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLmmVTLGI---NQPYL--AFLH 327
Cdd:PRK05846  259 ygLLRFslplFPDASHE--FAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQ 334
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 328 ICTHAFFKAMLFMCSGSIIHNLNDEqDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIesINICNTNAWA 407
Cdd:PRK05846  335 MISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVI 411
                         330
                  ....*....|....*....
gi 1789851249 408 LLVTLVATSMTAMYSMRII 426
Cdd:PRK05846  412 AFIATTGLILAAVYSLWLY 430
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
80-434 4.79e-21

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 96.34  E-value: 4.79e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWSIMQFSSWYMhSDYHINRFIKYLMMFLIT--MLILTSANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:COG1007    66 FVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVAF 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 158 WYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL----MTNNNNFIPLLGLLIAATG---KSAQFGLHP 230
Cdd:COG1007   145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAaalaAGGANSPLLLLGLVLVLAGlafKLSAVPFHM 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 231 WLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--HPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSS 307
Cdd:COG1007   225 WTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 308 QLGLMMVTLGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPF 384
Cdd:COG1007   304 HAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPP 383
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1789851249 385 LTGFYSKDSIIESinICNTNAWALLVTLVATSMTAM-YSMRIIYFVAMTKP 434
Cdd:COG1007   384 TAGFFGKFYVFSA--AVEAGLYWLAVIAVLNSVISAyYYLRVVKAMYFDEP 432
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
114-426 1.46e-20

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 95.19  E-value: 1.46e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 114 INRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRAdANTAALQAILYNRIG------DVGFILAMT 187
Cdd:PRK12662  109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 188 WfCLNM-NSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FHP 264
Cdd:PRK12662  188 G-TLNMgDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYD 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 265 LMSSNNTILT-----IMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKA 336
Cdd:PRK12662  266 VFKANFVFTTlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKS 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 337 MLFMCSGSIIHNLnDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVATS 416
Cdd:PRK12662  346 ALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA--FIKSNAWIGLVVLLVGS 422
                         330
                  ....*....|.
gi 1789851249 417 MTAM-YSMRII 426
Cdd:PRK12662  423 GLSViYVWKIV 433
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
80-464 2.77e-18

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 88.08  E-value: 2.77e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYhiNRFIKY-LMMFLITMLI---LTSanNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12663   73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSG--RRYGFPpFILLLMAGVIgsfLTG--DLFNLYVWFEVMLIASFVLI 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 156 GWWyGRADANTAALQAILYNRIGDVGFILAM-----TWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATG-KSAQFGLH 229
Cdd:PRK12663  149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIgllygTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGmKAALFPFM 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 230 pWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILT--IMMCLGALTTLFTAICALTQNDVKKIIAFSTSS 307
Cdd:PRK12663  228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLhpLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 308 QLGLMMVTLGINQP--------YLAFLHIcthafFKAMLFMCSGSIIHnLNDEQDIRKMGGIMKIMPFTSSCLIIGSLAL 379
Cdd:PRK12663  307 SIGFILLGLALGTPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 380 TGMPFLTGFYSKDSIIE-SINIcntNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMIIINENNPNLINPIKRLAL 458
Cdd:PRK12663  381 GGLPPFSGFWGKVLLVQgALDN---GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAV 457

                  ....*.
gi 1789851249 459 GSILAG 464
Cdd:PRK12663  458 VVIAMG 463
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
123-394 4.11e-18

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 87.78  E-value: 4.11e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 123 MFLITMLILTSAN-------NLFQLFIGWEGVGIMSFLLIGWWYGRaDANTAALQAILYNRIGDVgFIL----AMTWFCL 191
Cdd:PRK12561   88 LFYFLMLVLYSAQigvflaqDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILvaglALALSGD 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 192 NMnSWELQQILMTNNNNFIPLL---GLLIAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIR 261
Cdd:PRK12561  166 TF-TFDLAELGAKSYPLALELLlyaGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIR 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 262 FHPLMSSNNTIL--TIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMV------TLGINQpylAFLHICTHAF 333
Cdd:PRK12561  238 FNVQMLPDAHVYfaPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLgiaaftDLGISG---AMLQMISHGL 314
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1789851249 334 FKAMLFMCSGSI---IHNLNdeqdIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSI 394
Cdd:PRK12561  315 IAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTV 374
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-397 2.76e-17

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 85.00  E-value: 2.76e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  80 FKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHinRFIKY-LMMFLITMLI---LTSanNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK07691   73 FVADMFAALLVLTSSIITFLVILYSFQTIGIERE--RYYYYpSVLFMLAGVNgafLTG--DIFNLFVFFEVMLMASYVLI 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 156 GWWyGRADANTAALQAILYNRIGDVGFILAMTWF-----CLNMN--SWELQQILMTNNN--NFIPLLGLLIAATgKSAQF 226
Cdd:PRK07691  149 VIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILysvvgTLNMAdiSVKIAELSAGQTGliTVVAILFLFVFAT-KAGLF 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 227 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNNTILT--IMMCLGALTTLFTAICALTQNDVKKIIAFS 304
Cdd:PRK07691  227 PLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIIIYN 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 305 TSSQLGLMMVTLGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHnLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTG 381
Cdd:PRK07691  307 IMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAG 385
                         330
                  ....*....|....*.
gi 1789851249 382 MPFLTGFYSKDSIIES 397
Cdd:PRK07691  386 IPPLSGFYGKFFIVEG 401
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
120-440 5.19e-16

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 81.02  E-value: 5.19e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 120 YLMMF-LITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWEL 198
Cdd:PRK05777  107 LLVLFaLLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSF 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 199 QQILMTNNNNFIPLLGLLIAATGKSAQFG-------LHPWLPSAMEG-PTPVSALLHSSTMVvAGIFLLIR-----FHPL 265
Cdd:PRK05777  187 AGIAKALADGSGNSLLLLFGLVFLLVGLAfklsavpFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRllvvaFGGL 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 266 MSSNNTILTImmcLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTL--GINQPYLA-FLHICTHAFFKAMLFMCS 342
Cdd:PRK05777  266 SEDWQQVLAI---IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLaaGTAEGYSAvLFYLLAYLFMTLGAFGVI 342
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 343 GSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVATSM-TAMY 421
Cdd:PRK05777  343 SLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEA--AVEAGLWWLAVIGVLNSAiGAFY 420
                         330
                  ....*....|....*....
gi 1789851249 422 SMRIIYFVAMTKPRYPPMI 440
Cdd:PRK05777  421 YLRVIKLMYFDEPPRDAPV 439
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
209-433 5.94e-16

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 80.95  E-value: 5.94e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 209 FIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLMSSNN---TILTIMMCLGALTT 284
Cdd:PRK08676  206 GASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSI 284
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 285 LFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQP---YLAFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGI 361
Cdd:PRK08676  285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDV 363
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1789851249 362 MKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIesINICNTNAWALLVTLVATSMTAMySMRIIYFVAMTK 433
Cdd:PRK08676  364 FRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL--LQLGGISVWLVLAVLLLLLLAAS-SFAIFLLKAFTR 432
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
47-350 8.54e-16

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 80.46  E-value: 8.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  47 SLVPLLLFIHQNTEYMITSWHwITINSINMTmnfkidyFFILFLSvalyvtWSIMQFSSWYMHSDYHinrFIKYLMMFLI 126
Cdd:PRK08601   49 SLVALLGLIGANGDVVVGPWH-LDTLAWLMA-------FFVLTLG------FIIQRFSVRYLLGDRS---YRKYFALFTF 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 127 TMLILTSA---NNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILM 203
Cdd:PRK08601  112 TTGFASLAwlsGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLS 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 204 TNN-------NNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSStMVVAGIFLLIRFHPLMsSNNTILTIM 276
Cdd:PRK08601  192 NENlaqlgtwEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILL 269
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1789851249 277 MCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLN 350
Cdd:PRK08601  270 LIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
215-423 8.82e-16

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 80.40  E-value: 8.82e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 215 LLIAATGKSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFHPLMSSNNTILTIMMCLGALTTLFTAI 289
Cdd:PRK12665  215 LLVAFGIKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGIL 289
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 290 CALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGIMKIMP 366
Cdd:PRK12665  290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASP 368
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1789851249 367 FTSSCLIIGSLALTGMPFLTGFYSKDSIIES-INICNTNAWALLVTLVATSMTAMYSM 423
Cdd:PRK12665  369 LLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLYAV 426
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
228-388 7.19e-14

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 74.48  E-value: 7.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 228 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhPLMSSNNTIL--TIMMCLGALTTLFTAICALTQNDVKKIIAFST 305
Cdd:PRK08042  199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAPLWwgVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 306 SSQLGLMMVTLG-------INQPYLAFL-------HICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGIMKIMPFTSSC 371
Cdd:PRK08042  278 LENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIA 356
                         170
                  ....*....|....*..
gi 1789851249 372 LIIGSLALTGMPFLTGF 388
Cdd:PRK08042  357 MLVGLMAMAALPPLNGF 373
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
180-423 5.50e-12

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 68.13  E-value: 5.50e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 180 VGFILAMTWfclNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHS-STMVVA 254
Cdd:PRK06277  170 IGFLLASTG---TLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTfSKFVLV 246
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 255 GIFLLI-RFHPLMSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICT 330
Cdd:PRK06277  247 ALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAIN 326
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 331 HAFFKAMLFMCSGsIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWALLV 410
Cdd:PRK06277  327 HVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIM 405
                         250
                  ....*....|....*...
gi 1789851249 411 TLVA-----TSMTAMYSM 423
Cdd:PRK06277  406 IIVSigtfvSMMKAFYLI 423
ndhB CHL00049
NADH dehydrogenase subunit 2
6-391 7.28e-12

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 68.11  E-value: 7.28e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   6 SSILTIFIILCLPIFISMTNLIkhmnfplYATSSIKFSFFLSLVPLLLFIhqnteyMITSWHWITINSINMTMNFKIDYF 85
Cdd:CHL00049   14 SFIFPECILIFGLILLLMIDLT-------SDQKDIPWLYFISSTSLVMSI------TALLFQWREEPMISFSGNFQTNNF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  86 FILF-LSVALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADA 164
Cdd:CHL00049   81 NEIFqFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 165 NTAALQAILYNRIGDVGFILAMTW-FCLNMNSWELQQIL-------MTNNNNFIPLLGLLIAATG-KSAQFGLHPWLPSA 235
Cdd:CHL00049  161 NEATMKYLLMGGASSSILVYGFSWlYGLSGGEIELQEIVnglintqMYNSPGISIALIFITVGIGfKLSLAPFHQWTPDV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 236 MEG-PTPVSALLhSSTMVVAGIFLLIR-----FHPLMSSNNTILTIMMCLgalTTLFTAICALTQNDVKKIIAFSTSSQL 309
Cdd:CHL00049  241 YEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAIL---SMILGNLIAITQTSMKRMLAYSSIGQI 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 310 GLMMVTLGINQPYLAFLHICTHAFFkaMLFMCSGS----IIHNLNDEQD-IRKMGGIMKIMPFTSSCLIIGSLALTGMPF 384
Cdd:CHL00049  317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394

                  ....*..
gi 1789851249 385 LTGFYSK 391
Cdd:CHL00049  395 LAGFFGK 401
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
134-421 1.10e-11

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 67.42  E-value: 1.10e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGD----VGFiLAMTWFClNMNSWELQQILMTN---N 206
Cdd:PRK06473  126 AQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGililVSF-LGLVWLS-GASSFDYEPLRSHTlplS 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 207 NNFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF--HPLMSSNNTILTIMMCLGALT 283
Cdd:PRK06473  203 TQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVS 281
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 284 TLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY---LAFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGG 360
Cdd:PRK06473  282 VLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRG 360
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1789851249 361 IM---KIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIE-SINICNTNAwalLVTLVATSMTAMY 421
Cdd:PRK06473  361 LLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRgSFPIFPVQT---LLCMIGTGLTAVY 422
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
118-428 9.33e-11

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 64.56  E-value: 9.33e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 118 IKYLMM-FLITMLILT-------SANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMtwF 189
Cdd:MTH00226  126 VKYLTKsFLICMLILEfllyavfSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCL--F 203
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 190 CLNMNSWELQQILMTNNNNFIP-------LLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIR 261
Cdd:MTH00226  204 SLYNIHGTTDYLTLASCSHVVSeqtqkwiFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRL 283
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 262 FHPLMS-SNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTL------GINQPYLAFLhicTHAFF 334
Cdd:MTH00226  284 SWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthdiiGLTGSIFIML---AHGIV 360
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 335 KAMLFMCSgSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFyskdsIIESINICNTNAWALLVTLVA 414
Cdd:MTH00226  361 SSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF-----IGEYLSILSSFNWNPIIGVFV 434
                         330
                  ....*....|....
gi 1789851249 415 TSMTAMYSMRIIYF 428
Cdd:MTH00226  435 CSGVILSAVYSFYF 448
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
193-434 2.65e-10

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 62.15  E-value: 2.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 193 MNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpLMSSNNTI 272
Cdd:MTH00112   76 TNAWNTGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLN 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 273 LTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINqPYLAFLHICTHAFFKAMLFMcsgsiIHNLNDE 352
Cdd:MTH00112  151 PTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTST 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 353 QDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIEsiNICNTNAWALLVTLVATSMTAMY-SMRIIYFVAM 431
Cdd:MTH00112  225 KTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ--ELTKQNMTPTATIMAMLSLLSLFfYLRLTYISTI 302

                  ...
gi 1789851249 432 TKP 434
Cdd:MTH00112  303 TLP 305
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
68-117 3.19e-10

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 55.51  E-value: 3.19e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1789851249  68 WITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMHSDYHINRF 117
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
68-391 3.64e-10

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 62.76  E-value: 3.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  68 WITINSINMTMNFKIDYFFILFLS-VALYVTWSIMQFSSWYMHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEG 146
Cdd:PRK02504   62 WDNPNPISFLGSFNADNLSIAFRAiIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLET 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 147 VGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTW-FCLNMNSWELQQIL--MTNNNNFIPLLGLLIAATG-- 221
Cdd:PRK02504  142 LSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLlYGLSGGSTQLSAIAlaLITSPSLGLALALVFVIAGia 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 222 -KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF----HPLMSSN-NTILTImmcLGALTTLFTAICALTQ 294
Cdd:PRK02504  222 fKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRLlvtaFPSFDEQwKLLFTA---LAILSMVLGNVVALAQ 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 295 NDVKKIIAFSTSSQLGLMMVTL--GINQPYLAF-LHICTHAFFKAMLFMCsgSIIHNLNDEQD-IRKMGGIMKIMPFTSS 370
Cdd:PRK02504  298 TSMKRMLAYSSIGQAGFVMIGLvaGTEAGYASMvFYLLAYLFMNLGAFAC--VILFSLRTGTDqISDYAGLYQKDPLLTL 375
                         330       340
                  ....*....|....*....|.
gi 1789851249 371 CLIIGSLALTGMPFLTGFYSK 391
Cdd:PRK02504  376 GLSLCLLSLGGIPPLAGFFGK 396
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
134-388 1.11e-09

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 60.88  E-value: 1.11e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADAnTAALQAILYNRIGD---VGFILAMTWF----CLNMNSWELQQilMTNN 206
Cdd:PRK07363  126 AQNLLLFFLFYELELIPFYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVWLsgstSFDYDAISTQN--LSLN 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 207 NNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM--SSNNTILTIMMCLGALTT 284
Cdd:PRK07363  203 TQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpQTWSLVAPGLAIIGTISV 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 285 LFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYL---AFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGI 361
Cdd:PRK07363  283 IYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGL 361
                         250       260       270
                  ....*....|....*....|....*....|
gi 1789851249 362 M---KIMPFTSSCLIIGSLALTGMPFLTGF 388
Cdd:PRK07363  362 MnpiRGLPLTSALLVLAGMASAGIPGLVGF 391
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
12-423 7.34e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 58.41  E-value: 7.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  12 FIILCLPIFISMTNLIKHmnfPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMtmnfkidYFFILFLS 91
Cdd:MTH00206    1 KILIPLIMLLLMTILSKK---KWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSS-------PLVILSCW 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  92 VALYvtwsiMQFSSWYMHSDYHINRFIKYLMMFLITMLILT---SANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAA 168
Cdd:MTH00206   71 LLPL-----MFLASQNHMKNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAG 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 169 LQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL---MTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTpvsa 244
Cdd:MTH00206  146 YYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYfskLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV---- 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 245 llhSSTMVVAGIFL------LIRFHPLMS-SNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLM----- 312
Cdd:MTH00206  222 ---AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVtagil 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 313 -MVTLGINQPYLAFLhicTHAFFKAMLFmCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSK 391
Cdd:MTH00206  299 sGSPWGFKGALLLMI---AHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGE 374
                         410       420       430
                  ....*....|....*....|....*....|..
gi 1789851249 392 DSIIesINICNTNAWALLVTLVATSMTAMYSM 423
Cdd:MTH00206  375 LLII--TSLFSWSNFTLPLLGLGFLFTAIYSL 404
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
141-390 1.01e-07

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 54.71  E-value: 1.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 141 FIGWEGVGIMSFLLIGWWYGRaDANTAALQAILYNRIGDVgFIL----AMTWFClNMNSWELQQILMTNNNNFIPLL--- 213
Cdd:PRK02546  141 FLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMAFYG-DTPTFDMTALAAKDFGLGFQLLcya 217
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 214 GLLIAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLIRFHPLMSSNNTIL--------TIMMCLGALTT 284
Cdd:PRK02546  218 GLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALLRMNAGMLpdahaqfaPLLIVLGVVNI 290
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 285 LFTAICALTQNDVKKIIAFSTSSQLGLMMV------TLGINQpylAFLHICTHAFFKAMLFMCSGSI---IHNLNDEQdi 355
Cdd:PRK02546  291 IYAALTSFAQRNLKRKIAYSSISHMGFVLIgigsftDLGTSG---AMLQMISHGLIGASLFFLVGATydrTHTLMLDE-- 365
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1789851249 356 rkMGGIMKIMP-----FTSSCLiiGSLALTGMpflTGFYS 390
Cdd:PRK02546  366 --MGGVGQKMRkmfamWTACSL--ASLALPGM---SGFVA 398
ndhD CHL00011
NADH dehydrogenase subunit 4
131-382 6.25e-07

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 52.25  E-value: 6.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 131 LTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADAnTAALQAILYNRIGDVGF---ILAMTWFCLNMNSWELQqiLMTNNN 207
Cdd:CHL00011  128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFE--TLANQS 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 208 NFIPL-----LGLLIAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRFH-PLMSSNNTILT 274
Cdd:CHL00011  205 YPVALeilfyIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRINmELLPHAHSIFS 277
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 275 -IMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLG-INQPYL--AFLHICTHAFFKAMLFMCSGSI---IH 347
Cdd:CHL00011  278 pWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIR 357
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1789851249 348 NLNDEQdirkMGGIMKIMP--FTS-SCLIIGSLALTGM 382
Cdd:CHL00011  358 LVYLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM 391
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
185-434 2.10e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 50.30  E-value: 2.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 185 AMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHP 264
Cdd:MTH00070   68 ALILFSSTINAWFTGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 265 LMSSNntiltIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINqPYLAFLH-----ICTHAFFKAMLF 339
Cdd:MTH00070  148 LLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMN 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 340 MCSgsiihnlndeQDIRKMG-GIMKIMPFTSSCLIIgSLALTGMPFLTGFYSKDSIIESINICNTNAWALLVTLvATSMT 418
Cdd:MTH00070  222 LNS----------TNINKLSsSWSKNPTLTSMMMLT-LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMAL-SALLS 289
                         250
                  ....*....|....*.
gi 1789851249 419 AMYSMRIIYFVAMTKP 434
Cdd:MTH00070  290 LFFYLRLSYAMSLTTS 305
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
103-317 2.46e-06

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 50.56  E-value: 2.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 103 FSSWYMHSDYHINRFIKYLMMFLI-TMLILTSANNLFQLFIGWEGVGIMSFLLIGWWygrADANTAALQAILYNRIGDVG 181
Cdd:PRK06459   59 LASLYSIEYDHYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KKNKRPAFVFMAFGELSTVL 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 182 FILAMTWfclnmnswelqQILMTNNNNFIPLLG---LLIAATGKSAQFGLHP-----WLPSAM-EGPTPVSALLhSSTMV 252
Cdd:PRK06459  136 ILAGFAW-----------AFIISGTTNFSYLPSpvpLILASFGFIIKMGMMPflvseWLPIAHgNAPSNFSAIL-SATMT 203
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 253 VAGIFLLIRFHPL--MSSNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLG 317
Cdd:PRK06459  204 LMGVYGILKMTILtqTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALG 270
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
123-453 5.37e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 48.87  E-value: 5.37e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 123 MFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIL 202
Cdd:MTH00196    1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 203 MTNNNN------FIPLLGLLI--AATGKSAQFGLHPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIrfhplmSSNNTIL 273
Cdd:MTH00196   81 LVLNSGqsfssvSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSIL------VSIGLNV 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 274 TIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQpYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ 353
Cdd:MTH00196  153 NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS-FESIQASLVYLFIYIIMSICVFSIILALNVYK 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 354 D-IRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESInICNTNAWALLVTLVATSMTAMYSMR---IIYFV 429
Cdd:MTH00196  232 NlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRivkILFFQ 310
                         330       340
                  ....*....|....*....|....
gi 1789851249 430 AMTKPRYPPMIIINENNPNLINPI 453
Cdd:MTH00196  311 ANSFLLISTKILKKENKINLRKAL 334
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
30-316 6.58e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 49.00  E-value: 6.58e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  30 MNFPLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYMH 109
Cdd:MTH00163    2 LKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYK 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 110 SDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWF 189
Cdd:MTH00163   82 KNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 190 CLNMNSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF 262
Cdd:MTH00163  162 YNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRV 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1789851249 263 HPLMSSNNTIL-TIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTL 316
Cdd:MTH00163  235 MSFFSKLGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
275-499 1.26e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 48.19  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 275 IMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPY-----LAFLHICTHAFFKAMLFMCSGSIIhNL 349
Cdd:PRK12664  203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NR 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 350 NDEQDIRKMGGIMKiMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINICNTNAWAL--LVTLVATSMTAMYSMRIIY 427
Cdd:PRK12664  282 TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFW 360
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1789851249 428 FVAMTKPRYPPmiIINENNPNLINPIKRLALGSILAG----YVISNNIPPtnIQILTMPLYLKFTALVVSILGFLI 499
Cdd:PRK12664  361 YAFISKSKSKP--EAEKVYIGSKLSMIILVLICVVLGmfnsYLLFYNLPS--FVYTLKSVALQLGLILGTTLLFIC 432
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
121-454 2.19e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 46.89  E-value: 2.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 121 LMMFLITMLILTSaNNLFQLFIGWEgVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQ 200
Cdd:MTH00200   11 LSLGLGTLLTFSS-SHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 201 iLMTNNNNFIPLLGLLIaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSSNntiltIMMCLG 280
Cdd:MTH00200   89 -MLGPLSETLILLALAL----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLLLG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 281 ALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINqPYLAFLHicthaFFKAMLFMCSGSIIHNLNDEQDIRKMGG 360
Cdd:MTH00200  159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLSS 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 361 IMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESINIcNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRYPPMI 440
Cdd:MTH00200  233 SKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSK-QGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINM 311
                         330
                  ....*....|....
gi 1789851249 441 IINENNPNLINPIK 454
Cdd:MTH00200  312 MSSWRTKSNSNLLV 325
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
8-388 2.90e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 46.98  E-value: 2.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   8 ILTIFIILCLPIFISMtnLIKHMNFPLYATSSIKFSFFLSLVPLLLFIHQNTE---YMITSWHWITINSINMTMN---FK 81
Cdd:MTH00204    3 LSLIFLILFMGIINVM--GVPRENSVKLKKRALEWSLAILFSTLVLWGAFDGEgqfQFINLIEWIISPTLNFQWGplvFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  82 IDYFFILFLSVALYVTwSIMQFSSWYmhsdyHINRFIKYLMMFLITMLILT----SANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:MTH00204   81 VDGVSLFFILLTTLLI-PICILISWK-----SIKFLFKEFLLCLLFLEVLLigvfSVLDLLLFYILFEGILIPMFLLIGI 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 158 WYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQILMTN---NNNFIPLLGLLIAATGKSAQFGLHPWLPS 234
Cdd:MTH00204  155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlplSIQKWLLVGFFLSLAVKIPQIPFHIWLPQ 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 235 A-MEGPTPVSALLhsstmvvAGIFL------LIRFH----PLMSSNNTILTIMmcLGALTTLFTAICALTQNDVKKIIAF 303
Cdd:MTH00204  235 AhVEAPVAGSVIL-------AGILLklggygFLRFSwplfPAASEYFAPLIVM--LSVIAVIYGSLTTCRQVDFKRLIAY 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 304 STSSQLGLmmVTLGINQPYL-----AFLHICTHAFFKAMLFMCSgSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLA 378
Cdd:MTH00204  306 SSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
                         410
                  ....*....|
gi 1789851249 379 LTGMPFLTGF 388
Cdd:MTH00204  383 NMGFPLSCNF 392
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
8-312 3.42e-05

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 46.51  E-value: 3.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249   8 ILTIFIILCLPIFISMTNLikhmnfplyATSSIKFSFFLSLVPLLLFIHQNTeymiTSWHWITINSINMTMNFKIDYFFI 87
Cdd:MTH00044    5 ILLSLGIAITSWIVPKNKL---------WPISISQSSLISLLSLFLLNNHWS----SSWHNLSLSLATDSLSSPLIILSC 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  88 LFLSVALYVTWSIMQFsswymHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTA 167
Cdd:MTH00044   72 WLAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQA 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 168 ALQAILYNRIGDVGFILAM-----TWFCLNMNSWELQQILmTNNNNFIPLLGL--LIAATGKSAQFGLHPWLPSA-MEGP 239
Cdd:MTH00044  147 GLYFLFYTLFGSLPLLISLiaiysSSSSLSIPLSELNWLT-SLSSNSSSIWWIfcILAFLVKMPIYGFHLWLPKAhVEAP 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 240 TPVSallhsstMVVAGIFL------LIR-----FHPLMSSNNTILTIMMCLGALttlFTAICALTQNDVKKIIAFSTSSQ 308
Cdd:MTH00044  226 VAGS-------MILAAILLklggygLIRlinlfSLPSANNISFILIVFCCWGAL---ITSIICLRQTDLKALIAYSSVGH 295

                  ....
gi 1789851249 309 LGLM 312
Cdd:MTH00044  296 MSLV 299
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
194-421 5.55e-05

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 45.69  E-value: 5.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 194 NSWELQQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhplmsSNNTIL 273
Cdd:MTH00041   77 QAWLSGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLNS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 274 TIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINqPYLAFLHICTHAFFKAMLFmcsgsIIHNLNDEQ 353
Cdd:MTH00041  152 NILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIF-----LIGNNFSLS 225
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1789851249 354 DIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKdsIIESINICNTNAWALLVTLVATSMTAMY 421
Cdd:MTH00041  226 TLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNK--FISLYCLIQNNSILISIILIIGSLLSLF 291
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
117-318 9.13e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 45.43  E-value: 9.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 117 FIKYLMMFLITMLiltsanNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSW 196
Cdd:MTH00217  117 VIEILLMGVFTIL------DLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 197 ELQQILMTNNNNFIP---LLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRFH-PL 265
Cdd:MTH00217  191 DYQALCCLKIEKELQyfiFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFSwPL 263
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1789851249 266 MSSNNTILT-IMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLmmVTLGI 318
Cdd:MTH00217  264 LPEASEYFSpLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
77-423 1.17e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 44.91  E-value: 1.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  77 TMNFKIDYFFILFLSVALYV--TW--SIMQFSSWYMHSDYHINRFIKYLMMFLI--TMLILT-SANNLFQLFIGWEGVGI 149
Cdd:MTH00068   48 TMNFTNKYFGIDQISSPLLIltCWllPLMILASQNHLKNEPINRQRTYISMLIIlqLTLILAfSATELILFYIFFEATLI 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 150 MSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWEL------QQILMTNNNNFIPLLGLLIAATGKS 223
Cdd:MTH00068  128 PTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLillelmSPMQLMTYTNKIWWLACLLAFMVKM 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 224 AQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFHPLMSSNNTILT-IMMCLGALTTLFTAICALTQN 295
Cdd:MTH00068  208 PLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISILLTPLSKELSyPFIILALWGVLMTSLICLRQT 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 296 DVKKIIAFSTSSQLGLMMVTLGINQPYlaflhicthAFFKAMLFMCSGSIIH-------NLNDEQDIRK----MGGIMKI 364
Cdd:MTH00068  281 DLKSLIAYSSVSHMGLVIAAALIQTPW---------SFSGAIILMISHGLTSsalfclaNTNYERTHSRtlllLRGAQTI 351
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1789851249 365 MPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVATSMTAMYSM 423
Cdd:MTH00068  352 LPLMATWWLLSNLSNMALPPSPNLWGELTIMVS--LFNWSNWTILITGLGTLITAAYTL 408
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
100-312 1.43e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 44.44  E-value: 1.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 100 IMQFSSWYMHSDYHINRFIKYLMMFLITMLILT-SANNLFQLFIGWEGVGIMSFLLIGWWYGRADAntaaLQAILYNRIG 178
Cdd:MTH00150   39 LMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGWGYQPER----LQAGMYMMLY 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 179 DVG----FILAMTWFCLNMNSWELQQILMTNNNNFIPLLGLLIAATG---KSAQFGLHPWLPSA-MEGPTpvsallhSST 250
Cdd:MTH00150  115 TVGaslpLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAflvKLPMYPFHLWLPKAhVEAPV-------AGS 187
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1789851249 251 MVVAGIFL------LIRFHPLMS-SNNTILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLM 312
Cdd:MTH00150  188 MILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
114-445 4.61e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 43.02  E-value: 4.61e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 114 INRFIKY--LMMFLITMLILT-SANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFC 190
Cdd:MTH00127   90 INRQRMYitLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 191 LNMNSWEL------QQILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAG---IFLLI 260
Cdd:MTH00127  170 NSTGTLSMltlqysQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGygmMRMMV 249
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 261 RFHPLMSSNNTILTIMMCLGALTTlfTAICaLTQNDVKKIIAFSTSSQLGLMMVTLGINQPYL---AFLHICTHAFFKAM 337
Cdd:MTH00127  250 MLDPLTKELSYPFIILALWGIIMT--GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTSSA 326
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 338 LFmCSGSIIHNLNDEQDIRKMGGIMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSIIESinICNTNAWALLVTLVATSM 417
Cdd:MTH00127  327 LF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITS--LFNWSPWTLALTGLGTLI 403
                         330       340
                  ....*....|....*....|....*...
gi 1789851249 418 TAMYSMriiYFVAMTKPRYPPMIIINEN 445
Cdd:MTH00127  404 TAGYSL---YMFLMTQRGPLPDHIIALN 428
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
210-436 1.30e-03

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 41.30  E-value: 1.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 210 IPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLmssnnTILTIMMCLGALTTLFTAI 289
Cdd:MTH00011   89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGL 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 290 CALTQNDVKKIIAFSTSSQLGLMMVtLGINQPYLAFLHICTHAFFKAMLFMcsgsiIHNLNDEQDIRKMGGIMKIMPFTS 369
Cdd:MTH00011  164 GGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLML-----LFAYLNAFSTKFNSKISSMSQTTS 237
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789851249 370 SCLIIGSLALTGMPFLTGFYSKDSIIESInICNTNAWALLVTLVATSMTAMYSMRIIYFVAMTKPRY 436
Cdd:MTH00011  238 MSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTF 303
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
201-395 1.34e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 41.41  E-value: 1.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 201 ILMTNNNNFIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhPLMSSNNTILTIMMCLG 280
Cdd:MTH00144   76 IMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVIS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 281 ALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLndeqdirKMGG 360
Cdd:MTH00144  152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLG 224
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1789851249 361 IMKIMPFTSSCLIIGSLALTGMPFLTGFYSKDSII 395
Cdd:MTH00144  225 SLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVL 259
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
122-321 1.68e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 41.33  E-value: 1.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 122 MMFLITMLILT-SANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWF-----CLNMNS 195
Cdd:MTH00124   99 LILLQTFLILAfSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLhnqtgTLSLPM 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 196 WELQQILMTNNN-NFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFHPLMS 267
Cdd:MTH00124  179 LQLTHPTLTNSWtNLLLWLACLMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygIIRITLLLP 251
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1789851249 268 SNNTILT---IMMCL-GALTTlfTAICaLTQNDVKKIIAFSTSSQLGLMMVTLGINQP 321
Cdd:MTH00124  252 PLSNTLHypfLTLALwGALMT--SLIC-LRQTDLKSLIAYSSVSHMGLVIAATMIQTP 306
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
33-312 2.44e-03

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 40.88  E-value: 2.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  33 PLYATSSIKFSFFLSLVPLLLFIHQNTEYMITSWHWITINSINMTMNFKIDYFFILFLSVALYVTWSIMQFSSWYmhsdy 112
Cdd:MTH00014   15 PLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAP----- 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 113 hiNRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLN 192
Cdd:MTH00014   90 --KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYT 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 193 MNSWELQQILMTNNNNFIPLLGLLIAATG---KSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF 262
Cdd:MTH00014  168 NNSLSMLMSSMEPPSIYLMNLWWLITILAfmvKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRM 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1789851249 263 HPLMSSNNTILTIMMCLGALT-TLFTAICALTQNDVKKIIAFSTSSQLGLM 312
Cdd:MTH00014  241 SSLFMHINKSLSAPFSSISLVgAVITSLICIRQPDLKSLIAYSSVGHMGLM 291
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
42-314 8.94e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 38.81  E-value: 8.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249  42 FSFFLSLVPLLLFIHQNTEYMITSwHWITINSINMTMNFK----IDYFFILFLSVALYVTWSIM----------QFSSWY 107
Cdd:MTH00205    2 SIFGVFSLLIILFVLKFKDWSFFS-NLLLIGLFFSSFFFSnsflMTSFISSSFSFDSLSLPLIMlsfwisllmvLASYKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 108 MHSDYHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMT 187
Cdd:MTH00205   81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789851249 188 WFCLNMNSWELQQILMTNNN---NFIPLLGLLIAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL----- 258
Cdd:MTH00205  161 FLNSLNFSLSMFFNFPLNFSdfyLFLYWIFLMLAFLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggy 233
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1789851249 259 -LIRFHPLMSSNNT-ILTIMMCLGALTTLFTAICALTQNDVKKIIAFSTSSQLGLMMV 314
Cdd:MTH00205  234 gLIRITSMLYKLNSnFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVV 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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