NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1789852235|gb|QHB77413|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Hylomyscus simus]

Protein Classification

ATP synthase protein 8( domain architecture ID 10009565)

ATP synthase protein 8 is a component of mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 7.49e-28

ATP synthase F0 subunit 8; Validated


:

Pssm-ID: 214420  Cd Length: 67  Bit Score: 94.53  E-value: 7.49e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTLKTKNPWESKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
 
Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 7.49e-28

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 94.53  E-value: 7.49e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTLKTKNPWESKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-55 1.85e-10

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 50.42  E-value: 1.85e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQlFPLSPSPKTMTTLKTKNPWESKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH-TPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-67 7.49e-28

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 94.53  E-value: 7.49e-28
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTLKTKNPWESKWTKIYSPLSLPQQ 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-55 1.85e-10

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 50.42  E-value: 1.85e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQlFPLSPSPKTMTTLKTKNPWESKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH-TPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-51 2.21e-04

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 34.85  E-value: 2.21e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTLKTkNPW 51
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKT-EPW 50
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-55 4.50e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 31.56  E-value: 4.50e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTLKTkNPWESKW 55
Cdd:MTH00171   1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKP-NEWNWPW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-56 6.03e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 31.10  E-value: 6.03e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSQLFPLSPSPKTMTTlkTKNPWESKWT 56
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKKN--KPESWNWPWT 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-56 7.62e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 31.01  E-value: 7.62e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1789852235  1 MPQLDTSTWFITIISSLITLLILFQLKISSqlFPLSPSPKTMTTLKTKNPWESKWT 56
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILS--FTPTNNPTKTNTTTNTTPWTWPWT 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH