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Conserved domains on  [gi|1835945670|gb|QJF74446|]
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cytochrome b, partial (mitochondrion) [Danio rerio]

Protein Classification

cytochrome b( domain architecture ID 11475912)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 762.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00131    1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00131   81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00131  161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00131  241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00131  321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWL 372
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 762.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00131    1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00131   81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00131  161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00131  241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00131  321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWL 372
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
22-370 6.61e-129

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 375.28  E-value: 6.61e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  22 PTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIHIARG 101
Cdd:COG1290    31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 102 LYYGSY-----LyneTWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLT 176
Cdd:COG1290   111 FFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 177 RFFAFH-FLLPFIVIAMVILHLLFLHETGSNNPLG----LNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNllG 251
Cdd:COG1290   188 RFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--N 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 252 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQFLFWTLV 329
Cdd:COG1290   266 PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFI 345

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1835945670 330 ADMLVLTWIGGMPVehPYIIIGQMASILYFSLFLVLFPITG 370
Cdd:COG1290   346 VFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 3.17e-94

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 279.64  E-value: 3.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   9 PVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  89 FFFICLYIHIARGLYYGSY--LYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1835945670 167 GFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.39e-86

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 260.01  E-value: 1.39e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  18 LVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  98 IARGLYYG--SYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATL 175
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1835945670 176 TRFFAFHFLLPFIVIAMVILHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-330 3.97e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 57.88  E-value: 3.97e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1835945670 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAF-RPV--TQFLFWTLVA 330
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVatTVFLFGTVVA 140
 
Name Accession Description Interval E-value
CYTB MTH00131
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 762.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00131    1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00131   81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00131  161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00131  241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00131  321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWL 372
CYTB MTH00119
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 697.81  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00119    2 APNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00119   82 NLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00119  162 VEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00119  242 TLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00119  322 SQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGAL 373
CYTB MTH00100
cytochrome b; Provisional
 1-372 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 684.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLI 372
CYTB MTH00074
cytochrome b; Provisional
 4-372 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 679.87  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00074    5 IRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIH 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00074   85 ANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQW 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00074  165 IWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLS 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQF 323
Cdd:MTH00074  245 LFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQI 324

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1835945670 324 LFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00074  325 LFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWL 373
CYTB MTH00191
cytochrome b; Provisional
 4-368 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 655.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQF 323
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1835945670 324 LFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPI 368
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 11-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 636.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  11 LKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFF 90
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  91 FICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSV 170
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 171 DNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNLL 250
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 251 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQFLFWTLVA 330
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1835945670 331 DMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLF 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00034
cytochrome b; Validated
 4-372 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 614.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00034    4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00034   84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00034  164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQF 323
Cdd:MTH00034  244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1835945670 324 LFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00034  324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYL 372
CYTB MTH00145
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 611.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00145    2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00145   82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00145  162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00145  242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVL 365
Cdd:MTH00145  322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL 366
CYTB MTH00016
cytochrome b; Validated
 1-365 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 568.92  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   1 MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIR 80
Cdd:MTH00016    2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  81 SIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTL 160
Cdd:MTH00016   82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 161 VQWIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLS 240
Cdd:MTH00016  162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 241 LLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPV 320
Cdd:MTH00016  242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1835945670 321 TQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVL 365
Cdd:MTH00016  322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
CYTB MTH00022
cytochrome b; Validated
 4-372 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 522.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00022    3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00022   83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00022  163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQF 323
Cdd:MTH00022  243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1835945670 324 LFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00022  323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGEL 371
CYTB MTH00053
cytochrome b; Provisional
 3-372 0e+00

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 513.87  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   3 SLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSI 82
Cdd:MTH00053    4 TIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  83 HANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQ 162
Cdd:MTH00053   84 HANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVR 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 163 WIWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLL 242
Cdd:MTH00053  164 WVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSII 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 243 ALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQ 322
Cdd:MTH00053  244 VFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSK 323

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1835945670 323 FLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00053  324 ILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYL 373
CYTB MTH00224
cytochrome b; Provisional
 4-364 1.48e-178

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 500.60  E-value: 1.48e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00224    5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00224   85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00224  165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQF 323
Cdd:MTH00224  245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1835945670 324 LFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLV 364
Cdd:MTH00224  325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
CYTB MTH00033
cytochrome b; Provisional
 4-372 8.99e-142

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 407.79  E-value: 8.99e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   4 LRKTHpVLKIANDaLVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIH 83
Cdd:MTH00033    3 LRKTG-LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  84 ANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQW 163
Cdd:MTH00033   81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 164 IWGGFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLA 243
Cdd:MTH00033  161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 244 L--FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVT 321
Cdd:MTH00033  241 IepRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTG 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1835945670 322 QFLFWTLVADMLVLTWIGGMPV-EHPYIIIGQMASILYFSLFLVLFPITGIL 372
Cdd:MTH00033  321 KFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYL 372
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
22-370 6.61e-129

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 375.28  E-value: 6.61e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  22 PTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIHIARG 101
Cdd:COG1290    31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 102 LYYGSY-----LyneTWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLT 176
Cdd:COG1290   111 FFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 177 RFFAFH-FLLPFIVIAMVILHLLFLHETGSNNPLG----LNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNllG 251
Cdd:COG1290   188 RFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--N 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 252 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQFLFWTLV 329
Cdd:COG1290   266 PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFI 345

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1835945670 330 ADMLVLTWIGGMPVehPYIIIGQMASILYFSLFLVLFPITG 370
Cdd:COG1290   346 VFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILA 384
CYTB MTH00086
cytochrome b; Provisional
 15-366 1.28e-125

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 365.42  E-value: 1.28e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  15 NDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICL 94
Cdd:MTH00086    4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  95 YIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNAT 174
Cdd:MTH00086   84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 175 LTRFFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGfVIMLFSLSLLALFSPNLLGDPE 254
Cdd:MTH00086  164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLGDPE 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSkqrGMAFRPVTQFLFWTLVADMLV 334
Cdd:MTH00086  243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVI 319

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1835945670 335 LTWIGGMPVEHPYIIIGQMASILYFSLFLVLF 366
Cdd:MTH00086  320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
CYTB MTH00046
cytochrome b; Validated
 18-366 2.13e-94

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 285.72  E-value: 2.13e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  18 LVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIH 97
Cdd:MTH00046    9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  98 IARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLTR 177
Cdd:MTH00046   89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 178 FFAFHFLLPFIVIAMVILHLLFLHETGSNNPLGLNPNM-DKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNLLGDPENF 256
Cdd:MTH00046  169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 257 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLFSILVLMVVPilhtSKQRGMAFRPVTQFLFWTLVADMLVLT 336
Cdd:MTH00046  249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323

                         330       340       350
                  ....*....|....*....|....*....|
gi 1835945670 337 WIGGMPVEHPYIIIGQMASILyFSLFLVLF 366
Cdd:MTH00046  324 YLGGCHPEYPYLLISQLFSVL-MVLLLFIF 352
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 3.17e-94

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 279.64  E-value: 3.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670   9 PVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  89 FFFICLYIHIARGLYYGSY--LYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1835945670 167 GFSVDNATLTRFFAFHFLLPFIVIAMVILHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.39e-86

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 260.01  E-value: 1.39e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  18 LVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  98 IARGLYYG--SYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATL 175
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1835945670 176 TRFFAFHFLLPFIVIAMVILHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 207-354 1.65e-51

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 168.59  E-value: 1.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 207 NPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1835945670 287 KLGGVLALLFSILVLMVVPILHTSKQRGMaFRPVTQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMA 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
258-358 5.24e-48

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 157.64  E-value: 5.24e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQFLFWTLVADMLVLTW 337
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1835945670 338 IGGMPVEHPYIIIGQMASILY 358
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
88-253 1.44e-45

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 153.94  E-value: 1.44e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  88 SFFFICLYIHIARGLYYGSYLYNE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIW 165
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 166 GGFSVDNATLTRFFAFHF-LLPFIVIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLAL 244
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1835945670 245 FSPNLLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 33-209 3.07e-41

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 144.47  E-value: 3.07e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  33 FGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIHIARGLYYGSYLYNE- 111
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 112 -TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLTRFFAFH-FLLPFIV 189
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 1835945670 190 IAMVILHLLFLHETGSNNPL 209
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 24-209 4.04e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 122.91  E-value: 4.04e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670  24 PLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIHIARGLY 103
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1835945670 104 YGSYLYNE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLTRFFAF 181
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*....
gi 1835945670 182 H-FLLPFIVIAMVILHLLFLHETGSNNPL 209
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 258-330 3.63e-11

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 60.79  E-value: 3.63e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1835945670 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPIL-HTSKQRGMAFRPV--TQFLFWTLVA 330
Cdd:CHL00058   65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVatTVFLIGTAVA 140
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 258-329 1.61e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 59.04  E-value: 1.61e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1835945670 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFR---PVTQFLFWTLV 329
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRrpvATAVFLFGTLV 140
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-330 3.97e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 57.88  E-value: 3.97e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1835945670 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAF-RPV--TQFLFWTLVA 330
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVatTVFLFGTVVA 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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