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Conserved domains on  [gi|1840209500|gb|QJR84279|]
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cytochrome b, partial (mitochondrion) [Macronycteris vittatus]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 728.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00100   31 WNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00100  111 ETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIT 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00100  191 ALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00100  271 EWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 350

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00100  351 GQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 728.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00100   31 WNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00100  111 ETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIT 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00100  191 ALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00100  271 EWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 350

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00100  351 GQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-343 4.71e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 377.21  E-value: 4.71e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:COG1290    40 YWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKP 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 E--TWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALH-FLLPF 157
Cdd:COG1290   120 RelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPA 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 158 IIAAMVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDllGDPDNYTPANPLN 233
Cdd:COG1290   200 LLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLA 277

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 234 TPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQ 311
Cdd:COG1290   278 TPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGAN 357

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1840209500 312 PVehPFIIIGQLASILYFLIILVLLPLASTVE 343
Cdd:COG1290   358 PP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-176 2.90e-87

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 261.15  E-value: 2.90e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSY--T 78
Cdd:cd00284    23 WNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  79 YTETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFI 158
Cdd:cd00284   103 RELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFI 182

                         170
                  ....*....|....*...
gi 1840209500 159 IAAMVMVHLLFLHETGSN 176
Cdd:cd00284   183 IAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-174 2.52e-79

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 240.75  E-value: 2.52e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 --ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFI 158
Cdd:pfam00033  94 reLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFI 173

                         170
                  ....*....|....*.
gi 1840209500 159 IAAMVMVHLLFLHETG 174
Cdd:pfam00033 174 LAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 199-309 6.99e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.42  E-value: 6.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 199 ILGLVLMITGLLSLvlfAPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLH 278
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1840209500 279 TSKQRSMAF-RPLSQCLFwlLVADLLTLtWIG 309
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 728.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00100   31 WNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00100  111 ETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIT 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00100  191 ALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00100  271 EWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 350

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00100  351 GQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 663.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00119   32 WNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYK 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00119  112 ETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00119  192 GLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00119  272 EWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIII 351

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00119  352 GQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 641.70  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00131   31 WNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYK 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00131  111 ETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00131  191 AATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00131  271 EWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIII 350

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00131  351 GQVASVLYFSLFLVLMPLAGWLENKALEW 379
CYTB MTH00074
cytochrome b; Provisional
 1-349 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 621.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00074   32 WNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYK 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00074  112 ETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00074  192 GASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00074  272 EWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEI 351

                         330       340
                  ....*....|....*....|....*....
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLKW 349
Cdd:MTH00074  352 GQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 1-338 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 599.21  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00191   28 WNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNK 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00191  108 ETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIA 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00191  188 ALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKP 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00191  268 EWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILL 347

                         330
                  ....*....|....*...
gi 1840209500 321 GQLASILYFLIILVLLPL 338
Cdd:MTH00191  348 GQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 1-335 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 595.61  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00156   21 WNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLK 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00156  101 HTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIIL 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00156  181 AMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQP 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00156  261 EWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILT 340

                         330
                  ....*....|....*
gi 1840209500 321 GQLASILYFLIILVL 335
Cdd:MTH00156  341 GQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-347 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 570.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00145   32 WNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQ 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00145  112 HTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVIL 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00145  192 GLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00145  272 EWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETI 351

                         330       340
                  ....*....|....*....|....*..
gi 1840209500 321 GQLASILYFLIILVlLPLASTVENHLL 347
Cdd:MTH00145  352 GQVFTVLYFLFFLI-LPLVQKLWDNIL 377
CYTB MTH00034
cytochrome b; Validated
 1-347 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 562.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00034   31 WNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNI 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00034  111 ETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIA 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00034  191 ALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00034  271 EWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILL 350

                         330       340
                  ....*....|....*....|....*..
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLL 347
Cdd:MTH00034  351 GQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00016
cytochrome b; Validated
 1-348 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 537.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00016   32 WNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLM 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00016  112 ETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00016  192 ALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00016  272 EWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFL 351

                         330       340
                  ....*....|....*....|....*...
gi 1840209500 321 GQLASILYFlIILVLLPLASTVENHLLK 348
Cdd:MTH00016  352 GQIFTVFYF-FYFMINPLLMKLWDKLLK 378
CYTB MTH00022
cytochrome b; Validated
 1-348 1.04e-177

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 497.69  E-value: 1.04e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00022   30 WNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKF 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00022  110 HVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILA 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00022  190 FLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQP 269

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00022  270 EWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILI 349

                         330       340
                  ....*....|....*....|....*...
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLK 348
Cdd:MTH00022  350 GQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 1-348 2.02e-177

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 496.92  E-value: 2.02e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00053   32 WNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKI 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00053  112 IVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00053  192 GLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00053  272 EWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILI 351

                         330       340
                  ....*....|....*....|....*...
gi 1840209500 321 GQLASILYFLIILVLLPLASTVENHLLK 348
Cdd:MTH00053  352 GQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 1-348 1.85e-165

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 466.71  E-value: 1.85e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00224   32 WNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00224  112 ETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIM 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00224  192 GATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00224  272 EWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGI 351

                         330       340
                  ....*....|....*....|....*...
gi 1840209500 321 GQLASILYFlIILVLLPLASTVENHLLK 348
Cdd:MTH00224  352 GQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 1-344 4.90e-131

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 379.28  E-value: 4.90e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00033   28 WNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRV 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00033  108 LTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLV 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLvLMITGLLSLVLFAP---DLLGDPDNYTPANPLNTPPH 237
Cdd:MTH00033  188 GLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGF-LILFGVFVIIGIEPrieTLLQDPENFIQANPLVTPVH 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 238 IKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPV-EHP 316
Cdd:MTH00033  267 IQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADP 346

                         330       340
                  ....*....|....*....|....*...
gi 1840209500 317 FIIIGQLASILYFLIILVLLPLASTVEN 344
Cdd:MTH00033  347 YVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-343 4.71e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 377.21  E-value: 4.71e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:COG1290    40 YWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKP 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 E--TWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALH-FLLPF 157
Cdd:COG1290   120 RelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPA 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 158 IIAAMVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDllGDPDNYTPANPLN 233
Cdd:COG1290   200 LLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLA 277

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 234 TPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQ 311
Cdd:COG1290   278 TPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGAN 357

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1840209500 312 PVehPFIIIGQLASILYFLIILVLLPLASTVE 343
Cdd:COG1290   358 PP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 1-336 1.47e-118

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 346.54  E-value: 1.47e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00086   20 WNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLK 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00086  100 KVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITgLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKP 240
Cdd:MTH00086  180 VLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLGDPEMFIEADPMMSPVHIVP 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 241 EWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSkqrSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIII 320
Cdd:MTH00086  259 EWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFL 335

                         330
                  ....*....|....*.
gi 1840209500 321 GQLASILYFLIILVLL 336
Cdd:MTH00086  336 SQIFSFIYFFLILLML 351
CYTB MTH00046
cytochrome b; Validated
 1-334 2.01e-90

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 274.94  E-value: 2.01e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:MTH00046   22 WCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKK 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFIIA 160
Cdd:MTH00046  102 GVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVIL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 161 AMVMVHLLFLHETGSNNPTGIPSD-ADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIK 239
Cdd:MTH00046  182 GLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIK 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 240 PEWYFLFAYAILRSIPNKLGGVVaLVLSILILAVFPllhtSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFII 319
Cdd:MTH00046  262 PEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLL 336

                         330
                  ....*....|....*
gi 1840209500 320 IGQLASILYFLIILV 334
Cdd:MTH00046  337 ISQLFSVLMVLLLFI 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-176 2.90e-87

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 261.15  E-value: 2.90e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSY--T 78
Cdd:cd00284    23 WNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  79 YTETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFI 158
Cdd:cd00284   103 RELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFI 182

                         170
                  ....*....|....*...
gi 1840209500 159 IAAMVMVHLLFLHETGSN 176
Cdd:cd00284   183 IAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-174 2.52e-79

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 240.75  E-value: 2.52e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   1 WNFGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYT 80
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  81 --ETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALHFLLPFI 158
Cdd:pfam00033  94 reLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFI 173

                         170
                  ....*....|....*.
gi 1840209500 159 IAAMVMVHLLFLHETG 174
Cdd:pfam00033 174 LAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 177-324 7.95e-55

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 176.30  E-value: 7.95e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 177 NPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 256
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1840209500 257 KLGGVVALVLSILILAVFPLLHTSKQRSMaFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLA 324
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
228-328 1.25e-48

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 158.80  E-value: 1.25e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 228 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTW 307
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1840209500 308 IGGQPVEHPFIIIGQLASILY 328
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
58-223 6.26e-43

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 146.23  E-value: 6.26e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  58 SMFFICLFLHVGRGIYYGSYTYTE--TWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVW 135
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 136 GGFSVDKATLTRFFALHF-LLPFIIAAMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYHTIKDILGLVLMITGLLSLVL 214
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1840209500 215 FAPDLLGDP 223
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 3-178 4.72e-40

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 140.62  E-value: 4.72e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   3 FGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYTE- 81
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  82 -TWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALH-FLLPFII 159
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 1840209500 160 AAMVMVHLLFLHETGSNNP 178
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
petB CHL00070
cytochrome b6
 3-178 7.72e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 121.37  E-value: 7.72e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500   3 FGSLLGICLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYTE- 81
Cdd:CHL00070   36 LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRe 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500  82 -TWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTGLVEWVWGGFSVDKATLTRFFALH-FLLPFII 159
Cdd:CHL00070  116 lTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLT 195

                         170
                  ....*....|....*....
gi 1840209500 160 AAMVMVHLLFLHETGSNNP 178
Cdd:CHL00070  196 AVFMLMHFLMIRKQGISGP 214
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 199-309 1.37e-11

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 62.12  E-value: 1.37e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 199 ILGLVLMITGLLSLvlfAPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLH 278
Cdd:COG5679    45 ILGTIALCIGLAVL---DPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIE 116

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1840209500 279 TSKQRSMAF-RPLSQCLFwlLVADLLTLtWIG 309
Cdd:COG5679   117 NVNKFQNPFrRPVATAVF--LFGTLVTL-WLG 145
petD CHL00058
cytochrome b6/f complex subunit IV
 199-295 6.04e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 57.32  E-value: 6.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 199 ILGLVLMITGLLSLvlfAPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLL- 277
Cdd:CHL00058   44 ILGTIACNVGLAVL---EPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115

                          90
                  ....*....|....*...
gi 1840209500 278 HTSKQRSMAFRPLSQCLF 295
Cdd:CHL00058  116 NVNKFQNPFRRPVATTVF 133
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 199-309 6.99e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.42  E-value: 6.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1840209500 199 ILGLVLMITGLLSLvlfAPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAVFPLLH 278
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1840209500 279 TSKQRSMAF-RPLSQCLFwlLVADLLTLtWIG 309
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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