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Conserved domains on  [gi|1849899341|gb|QKI87981|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Myotis cf. mystacinus ZMB Mam 108547]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
1-150 2.01e-95

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00104:

Pssm-ID: 469782  Cd Length: 318  Bit Score: 278.05  E-value: 2.01e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIIL 150
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-150 2.01e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 278.05  E-value: 2.01e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIIL 150
NADHdh pfam00146
NADH dehydrogenase;
6-150 7.84e-56

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 176.51  E-value: 7.84e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   6 LLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1849899341  86 WIPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSL 148
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-150 1.65e-51

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 166.46  E-value: 1.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1849899341  81 LALTMWIPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSL 161
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-150 2.01e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 278.05  E-value: 2.01e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIIL 150
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-150 1.18e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 268.69  E-value: 1.18e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00111    6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00111   86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIIL 155
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-150 4.58e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 254.55  E-value: 4.58e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00071    6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00071   86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLIL 155
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-150 2.58e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 252.60  E-value: 2.58e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00134    7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00134   87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLIL 156
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-150 5.20e-75

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 225.94  E-value: 5.20e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   2 YFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTL 81
Cdd:MTH00218    4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1849899341  82 ALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00218   84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLII 152
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-150 9.30e-70

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 212.91  E-value: 9.30e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLIL 154
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-150 6.70e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 194.99  E-value: 6.70e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALIL 152
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-150 7.26e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 187.26  E-value: 7.26e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   4 INLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLAL 83
Cdd:MTH00195    6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1849899341  84 TMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00195   86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLII 152
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 13-150 2.40e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 183.15  E-value: 2.40e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  13 ILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLALTMWIPLPMP 92
Cdd:MTH00143   14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1849899341  93 HPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00143   94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLIL 151
NADHdh pfam00146
NADH dehydrogenase;
6-150 7.84e-56

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 176.51  E-value: 7.84e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   6 LLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1849899341  86 WIPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSL 148
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-150 7.23e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 174.45  E-value: 7.23e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341  81 LALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALIL 151
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-150 1.65e-51

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 166.46  E-value: 1.65e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:COG1005    10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1849899341  81 LALTMWIPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:COG1005    90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSL 161
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-150 9.84e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 161.83  E-value: 9.84e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   2 YFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTL 81
Cdd:MTH00216    8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1849899341  82 ALTMWIPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00216   88 ALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLII 158
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-150 3.62e-48

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 157.66  E-value: 3.62e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1849899341  81 LALTMWIPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:PRK06076   91 PAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSL 162
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-150 3.82e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 157.58  E-value: 3.82e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALT 80
Cdd:MTH00054    3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1849899341  81 LALTMW--IPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00054   83 LAFIAWgvIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLII 154
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-150 1.27e-45

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 150.70  E-value: 1.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   2 YFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTL 81
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1849899341  82 ALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLIL 153
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-150 5.42e-40

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 137.07  E-value: 5.42e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   4 INLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLAL 83
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1849899341  84 TMWIPLPMPHP--LINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00029   91 LAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLII 159
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-150 4.01e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 120.39  E-value: 4.01e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   5 NLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLALT 84
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1849899341  85 MWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYL 146
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-148 6.36e-26

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 100.41  E-value: 6.36e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   3 FINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTLA 82
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1849899341  83 LTMWIPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAI 148
Cdd:CHL00032  110 LLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL 177
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-150 1.09e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 95.76  E-value: 1.09e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   2 YFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPTQPLTSSLTLFIIAPTLALTL 81
Cdd:MTH00058    3 GLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLL 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1849899341  82 ALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:MTH00058   83 VVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIV 151
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-150 7.45e-12

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 61.35  E-value: 7.45e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1849899341   1 MYFINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPnivgpyGLLQPIADAVKLFTKEPTQPLTSSLtLFIIAPTLAL- 79
Cdd:COG0650     2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALa 74

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1849899341  80 -TLALTMWIPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIII 150
Cdd:COG0650    75 aMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVL 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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