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Conserved domains on  [gi|1861254778|gb|QKX65245|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Acanthogobius stigmothonus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.01e-63

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 187.82  E-value: 3.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  81 QLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.01e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 187.82  E-value: 3.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  81 QLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 2.99e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 2.99e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778  19 ILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQL-LNPTATFIWATLLLG 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1861254778  98 LLTLGLIYEWLQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-114 6.45e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.55  E-value: 6.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   5 ASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQLLN 84
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1861254778  85 -PTATFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:COG0838    87 lGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.01e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 187.82  E-value: 3.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  81 QLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 6.99e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 166.71  E-value: 6.99e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   3 LTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQL 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1861254778  83 LNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 7.39e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 156.58  E-value: 7.39e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   2 NLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQ 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1861254778  82 LLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWA 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 3.48e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 142.00  E-value: 3.48e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASvILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00106    1 MNLMLT-LLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  81 QLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.57e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 127.79  E-value: 1.57e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  81 QLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 8.47e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 123.47  E-value: 8.47e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1861254778  81 QLLNPtaTFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:MTH00203   81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-114 6.68e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.30  E-value: 6.68e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   7 VILISSILSTILILVSFWLPLVSP-DEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQLLNP 85
Cdd:MTH00161    5 ILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNM 84

                          90       100
                  ....*....|....*....|....*....
gi 1861254778  86 TATFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:MTH00161   85 MSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 7-116 9.17e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 93.00  E-value: 9.17e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   7 VILISSILSTILILVSFWL-PLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQLLNP 85
Cdd:MTH00148    7 SLLFALILSPVLLLLGLVLsKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFS 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1861254778  86 TATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00148   87 VWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 2.99e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 2.99e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778  19 ILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQL-LNPTATFIWATLLLG 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1861254778  98 LLTLGLIYEWLQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 7-114 1.77e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 87.07  E-value: 1.77e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   7 VILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQLLNPT 86
Cdd:MTH00055   11 LLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIG 88

                          90       100
                  ....*....|....*....|....*....
gi 1861254778  87 ATFIWATLLLGLLTLG-LIYEWLQGGLEW 114
Cdd:MTH00055   89 LFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 7.06e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.43  E-value: 7.06e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVS-PDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1861254778  80 NQLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-114 1.16e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 85.11  E-value: 1.16e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   8 ILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQLLNPTA 87
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                          90       100
                  ....*....|....*....|....*..
gi 1861254778  88 TFIwATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:MTH00018   87 FWT-MVGFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-114 6.45e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.55  E-value: 6.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   5 ASVILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQLLN 84
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1861254778  85 -PTATFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:COG0838    87 lGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 7.32e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 80.67  E-value: 7.32e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILILVSFWLPLVSP-DEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1861254778  80 NQLLNPTATFIWATLLLGLLTLGLIYEWLQGGLEWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-115 4.06e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 4.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   8 ILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLlpLPWGNQLLNPTA 87
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92

                          90       100
                  ....*....|....*....|....*....
gi 1861254778  88 T-FIWATLLLGLLTLGLIYEWLQGGLEWA 115
Cdd:PRK06602   93 LgFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-114 2.94e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.49  E-value: 2.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   1 MNLTASVILISSILSTILIL----VSFWLP-----LVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIA 71
Cdd:MTH00030    1 MNPEFKTIFFSTLLGVGIILllvsISFTLGnsrigLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEIS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1861254778  72 LLLPLPWGNQLLNpTATFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:MTH00030   81 FLFPWSIVFNQLN-LFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 8-114 3.81e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 53.07  E-value: 3.81e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778   8 ILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLPWGNQLLNPTA 87
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSA 93

                          90       100
                  ....*....|....*....|....*..
gi 1861254778  88 tFIWATLLLGLLTLGLIYEWLQGGLEW 114
Cdd:CHL00022   94 -FIEALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 7-74 7.29e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 49.51  E-value: 7.29e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1861254778   7 VILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092    7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 4.48e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.05  E-value: 4.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778  34 KVSPYECGFDPLGSARLP--FSMRFFLVAILFLLFDLEIALLLPlpWGNQLlNPTATF--IWATLLLGLLTLGLIYEWLQ 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSF-DALGVFglVEMALFMLTVFVAYAYVWRR 113


                  ....*
gi 1861254778 110 GGLEW 114
Cdd:PRK07928  114 GGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
8-75 2.68e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 42.81  E-value: 2.68e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1861254778   8 ILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLP 75
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-114 9.80e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.58  E-value: 9.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1861254778  34 KVSPYECGFDPLGSARlPFSMRFFLVAILFLLFDLEIALLLPLPWGNQLLNpTATFIWATLLLGLLTLGLIYEWLQGGLE 113
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKLLG-LFGLIEMLLFIVLLTIGFIYAWKKGALE 124


                  .
gi 1861254778 114 W 114
Cdd:PRK08489  125 W 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-77 7.42e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.11  E-value: 7.42e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1861254778  35 VSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060   38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 7-77 2.55e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 34.97  E-value: 2.55e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1861254778   7 VILISSILSTILILVSFWLPLVSPDEQKVSPYECGFDPLGSARLPFSMRFFLVAILFLLFDLEIALLLPLP 77
Cdd:PRK06073   13 VIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIA 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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