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Conserved domains on  [gi|1883779913|gb|QMT14880|]
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toll-like receptor 4, partial [Sittiparus varius]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 11469232)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
66-254 2.70e-14

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 71.89  E-value: 2.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913  66 IGNVSTVRLVDLGLEKISQVPAR----SKVKQLECKKCSFEDVPAlKLSLFKELRVLRITKNKrLKNFSQNFEGLTNLEV 141
Cdd:COG4886   109 LSNLTNLESLDLSGNQLTDLPEElanlTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKE 186

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 142 IDLSENRLTFSgccSPQFQNCPNLKHLNLSFNSNIRLTGDFANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYLDISHT 221
Cdd:COG4886   187 LDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQL---TDLPELGNLTNLEELDLSNN 260

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1883779913 222 KteVKSQCTFCGLNSLRVLKMAGNSFEGNKLAS 254
Cdd:COG4886   261 Q--LTDLPPLANLTNLKTLDLSNNQLTDLKLKE 291
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
66-254 2.70e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 71.89  E-value: 2.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913  66 IGNVSTVRLVDLGLEKISQVPAR----SKVKQLECKKCSFEDVPAlKLSLFKELRVLRITKNKrLKNFSQNFEGLTNLEV 141
Cdd:COG4886   109 LSNLTNLESLDLSGNQLTDLPEElanlTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKE 186

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 142 IDLSENRLTFSgccSPQFQNCPNLKHLNLSFNSNIRLTGDFANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYLDISHT 221
Cdd:COG4886   187 LDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQL---TDLPELGNLTNLEELDLSNN 260

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1883779913 222 KteVKSQCTFCGLNSLRVLKMAGNSFEGNKLAS 254
Cdd:COG4886   261 Q--LTDLPPLANLTNLKTLDLSNNQLTDLKLKE 291
LRR_8 pfam13855
Leucine rich repeat;
114-173 6.63e-06

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 42.51  E-value: 6.63e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1883779913 114 ELRVLRITKNkRLKNFSQ-NFEGLTNLEVIDLSENRLTFSgccSPQ-FQNCPNLKHLNLSFN 173
Cdd:pfam13855   2 NLRSLDLSNN-RLTSLDDgAFKGLSNLKVLDLSNNLLTTL---SPGaFSGLPSLRYLDLSGN 59
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 109-249 1.01e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 43.30  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 109 LSLFKELRVLRITKNKRLKNFSQNFEGLTNLEVIDLSENRLT----------------------FSGCCSPQFQNCPNLK 166
Cdd:PLN00113  160 IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgqiprelgqmkslkwiylgynnLSGEIPYEIGGLTSLN 239

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 167 HLNLSFNSnirLTGD----FANVKNLLYLDLQHTTLFGPGSYPVFlSLQKLIYLDISHTKTEVKSQCTFCGLNSLRVLKM 242
Cdd:PLN00113  240 HLDLVYNN---LTGPipssLGNLKNLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315


                  ....*..
gi 1883779913 243 AGNSFEG 249
Cdd:PLN00113  316 FSNNFTG 322
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 108-245 1.56e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.70  E-value: 1.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 108 KLSLFKELRVL-----RITKNKRLKNFSQ---------------NFEGLTNLEVIDLSENRLTF-SGccspqFQNCPNLK 166
Cdd:cd21340    19 NLSLCKNLKVLylydnKITKIENLEFLTNlthlylqnnqiekieNLENLVNLKKLYLGGNRISVvEG-----LENLTNLE 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 167 HLNLsfnSNIRLTGD----------FANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYLDISHTK-TEVKSQC-TFCGL 234
Cdd:cd21340    94 ELHI---ENQRLPPGekltfdprslAALSNSLRVLNISGNNI---DSLEPLAPLRNLEQLDASNNQiSDLEELLdLLSSW 167

                         170
                  ....*....|.
gi 1883779913 235 NSLRVLKMAGN 245
Cdd:cd21340   168 PSLRELDLTGN 178
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
66-254 2.70e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 71.89  E-value: 2.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913  66 IGNVSTVRLVDLGLEKISQVPAR----SKVKQLECKKCSFEDVPAlKLSLFKELRVLRITKNKrLKNFSQNFEGLTNLEV 141
Cdd:COG4886   109 LSNLTNLESLDLSGNQLTDLPEElanlTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKE 186

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 142 IDLSENRLTFSgccSPQFQNCPNLKHLNLSFNSNIRLTGDFANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYLDISHT 221
Cdd:COG4886   187 LDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQL---TDLPELGNLTNLEELDLSNN 260

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1883779913 222 KteVKSQCTFCGLNSLRVLKMAGNSFEGNKLAS 254
Cdd:COG4886   261 Q--LTDLPPLANLTNLKTLDLSNNQLTDLKLKE 291
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
73-261 1.85e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 66.50  E-value: 1.85e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913  73 RLVDLGLEKISQVPARSKVKQLECKKCSFEDVPAlKLSLFKELRVLRITKNKrLKNFSQNFEGLTNLEVIDLSENRLTfs 152
Cdd:COG4886    97 NLTELDLSGNEELSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLT-- 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 153 gCCSPQFQNCPNLKHLNLSFNSNIRLTGDFANVKNLLYLDLQHTTLfgpGSYPVFLS-LQKLIYLDISHTKteVKSQCTF 231
Cdd:COG4886   173 -DLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQL---TDLPEPLAnLTNLETLDLSNNQ--LTDLPEL 246

                         170       180       190
                  ....*....|....*....|....*....|
gi 1883779913 232 CGLNSLRVLKMAGNSFEGNKLASNFKNLSH 261
Cdd:COG4886   247 GNLTNLEELDLSNNQLTDLPPLANLTNLKT 276
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
61-261 4.15e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.26  E-value: 4.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913  61 TLFNCIGNVSTVRLVDLGLEKISQVPAR----SKVKQLECKKCSFEDVPAlKLSLFKELRVLRITKNKrLKNFSQNFEGL 136
Cdd:COG4886   127 DLPEELANLTNLKELDLSNNQLTDLPEPlgnlTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQ-ITDLPEPLGNL 204

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 137 TNLEVIDLSENRLTFsgcCSPQFQNCPNLKHLNLSFNsNIRLTGDFANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYL 216
Cdd:COG4886   205 TNLEELDLSGNQLTD---LPEPLANLTNLETLDLSNN-QLTDLPELGNLTNLEELDLSNNQL---TDLPPLANLTNLKTL 277

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1883779913 217 DISHTKTEVKSQCTFCGLNSLRVLKMAGNSFEGNKLASNFKNLSH 261
Cdd:COG4886   278 DLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322
LRR_8 pfam13855
Leucine rich repeat;
114-173 6.63e-06

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 42.51  E-value: 6.63e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1883779913 114 ELRVLRITKNkRLKNFSQ-NFEGLTNLEVIDLSENRLTFSgccSPQ-FQNCPNLKHLNLSFN 173
Cdd:pfam13855   2 NLRSLDLSNN-RLTSLDDgAFKGLSNLKVLDLSNNLLTTL---SPGaFSGLPSLRYLDLSGN 59
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 109-249 1.01e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 43.30  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 109 LSLFKELRVLRITKNKRLKNFSQNFEGLTNLEVIDLSENRLT----------------------FSGCCSPQFQNCPNLK 166
Cdd:PLN00113  160 IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgqiprelgqmkslkwiylgynnLSGEIPYEIGGLTSLN 239

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 167 HLNLSFNSnirLTGD----FANVKNLLYLDLQHTTLFGPGSYPVFlSLQKLIYLDISHTKTEVKSQCTFCGLNSLRVLKM 242
Cdd:PLN00113  240 HLDLVYNN---LTGPipssLGNLKNLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315


                  ....*..
gi 1883779913 243 AGNSFEG 249
Cdd:PLN00113  316 FSNNFTG 322
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
107-248 1.17e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 43.00  E-value: 1.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 107 LKLSLFKELRVLRITKNKRLKNFSQNFEGLTNLEVIDLSENRltfsgccspQFQNCPNLKHLNLSFNSNIRLTGDFANVK 186
Cdd:COG4886    66 LLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDLSGNQLTDLPEELANLT 136

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1883779913 187 NLLYLDLQHTTLfgpGSYPVFLS-LQKLIYLDISHTK-TEVKSqcTFCGLNSLRVLKMAGNSFE 248
Cdd:COG4886   137 NLKELDLSNNQL---TDLPEPLGnLTNLKSLDLSNNQlTDLPE--ELGNLTNLKELDLSNNQIT 195
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 108-245 1.56e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.70  E-value: 1.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 108 KLSLFKELRVL-----RITKNKRLKNFSQ---------------NFEGLTNLEVIDLSENRLTF-SGccspqFQNCPNLK 166
Cdd:cd21340    19 NLSLCKNLKVLylydnKITKIENLEFLTNlthlylqnnqiekieNLENLVNLKKLYLGGNRISVvEG-----LENLTNLE 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 167 HLNLsfnSNIRLTGD----------FANVKNLLYLDLQHTTLfgpGSYPVFLSLQKLIYLDISHTK-TEVKSQC-TFCGL 234
Cdd:cd21340    94 ELHI---ENQRLPPGekltfdprslAALSNSLRVLNISGNNI---DSLEPLAPLRNLEQLDASNNQiSDLEELLdLLSSW 167

                         170
                  ....*....|.
gi 1883779913 235 NSLRVLKMAGN 245
Cdd:cd21340   168 PSLRELDLTGN 178
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 137-184 1.84e-03

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 35.30  E-value: 1.84e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1883779913 137 TNLEVIDLSENRLTFSgccsPQFQNCPNLKHLNLSFNSNIRLTGDFAN 184
Cdd:pfam12799   1 PNLEVLDLSNNQITDI----PPLAKLPNLETLDLSGNNKITDLSDLAN 44
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 105-173 1.88e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 38.61  E-value: 1.88e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1883779913 105 PALKLSLFKELRVLRITKNkRLKNFSQnFEGLTNLEVIDLSENRLTFSGCCSPQFQNCPNLKHLNLSFN 173
Cdd:cd21340   112 PRSLAALSNSLRVLNISGN-NIDSLEP-LAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
LRR_8 pfam13855
Leucine rich repeat;
137-196 2.02e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.58  E-value: 2.02e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1883779913 137 TNLEVIDLSENRLTfsGCCSPQFQNCPNLKHLNLSFNSNIRLTGD-FANVKNLLYLDLQHT 196
Cdd:pfam13855   1 PNLRSLDLSNNRLT--SLDDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGN 59
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 100-254 3.12e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 38.68  E-value: 3.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 100 SFEDVPALKLSLFKELRVLRITKNKRLKNFSQNFEGLTNLEVIDLSENRLtfSGCCSPQFQNCPNLKHLNLSFNSNIRLT 179
Cdd:PLN00113  391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNL--QGRINSRKWDMPSLQMLSLARNKFFGGL 468

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1883779913 180 GDFANVKNLLYLDLQHTTLfgPGSYPV-FLSLQKLIYLDISHTKT--EVKSQCTFCglNSLRVLKMAGNSFEGNKLAS 254
Cdd:PLN00113  469 PDSFGSKRLENLDLSRNQF--SGAVPRkLGSLSELMQLKLSENKLsgEIPDELSSC--KKLVSLDLSHNQLSGQIPAS 542
LRR_8 pfam13855
Leucine rich repeat;
187-247 5.04e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 34.42  E-value: 5.04e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1883779913 187 NLLYLDLQHTTL--FGPGSypvFLSLQKLIYLDISHTKTEVKSQCTFCGLNSLRVLKMAGNSF 247
Cdd:pfam13855   2 NLRSLDLSNNRLtsLDDGA---FKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 130-249 5.56e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.91  E-value: 5.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 130 SQNFEGLTNLEVIDLSENRLTFSgccSPQ--FQNCPNLKHLNLSFNSnirLTGDFAN--VKNLLYLDLQHTTLFG--PGS 203
Cdd:PLN00113   86 SSAIFRLPYIQTINLSNNQLSGP---IPDdiFTTSSSLRYLNLSNNN---FTGSIPRgsIPNLETLDLSNNMLSGeiPND 159

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1883779913 204 YPVFLSLQkliYLDISHTKTEVKSQCTFCGLNSLRVLKMAGNSFEG 249
Cdd:PLN00113  160 IGSFSSLK---VLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG 202
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 118-249 6.35e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.91  E-value: 6.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1883779913 118 LRITKNKRLKNFSQNFEGLTNLEVIDLSENRltFSGCCsPQFQNCPNLKHLNLSFNsniRLTG----DFANVKNLLYLDL 193
Cdd:PLN00113  433 LDISNNNLQGRINSRKWDMPSLQMLSLARNK--FFGGL-PDSFGSKRLENLDLSRN---QFSGavprKLGSLSELMQLKL 506

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1883779913 194 QHTTLfgPGSYPVFLS-LQKLIYLDISHTKTEVKSQCTFCGLNSLRVLKMAGNSFEG 249
Cdd:PLN00113  507 SENKL--SGEIPDELSsCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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