NADH dehydrogenase subunit 4, partial (mitochondrion) [Cratera arucuia]
proton-conducting transporter membrane subunit( domain architecture ID 1562513)
proton-conducting transporter membrane subunit such as NADH dehydrogenase subunit 2, 4, or N, which shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Proton_antipo_M super family | cl39059 | Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
2-123 | 1.27e-14 | |||
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla. The actual alignment was detected with superfamily member MTH00150: Pssm-ID: 476862 [Multi-domain] Cd Length: 417 Bit Score: 68.33 E-value: 1.27e-14
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Name | Accession | Description | Interval | E-value | |||
ND4 | MTH00150 | NADH dehydrogenase subunit 4; Provisional |
2-123 | 1.27e-14 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 68.33 E-value: 1.27e-14
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Proton_antipo_M | pfam00361 | Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-52 | 8.92e-03 | |||
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla. Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 34.60 E-value: 8.92e-03
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Name | Accession | Description | Interval | E-value | |||
ND4 | MTH00150 | NADH dehydrogenase subunit 4; Provisional |
2-123 | 1.27e-14 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 68.33 E-value: 1.27e-14
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ND4 | MTH00163 | NADH dehydrogenase subunit 4; Provisional |
1-117 | 2.35e-11 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 59.01 E-value: 2.35e-11
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ND4 | MTH00205 | NADH dehydrogenase subunit 4; Provisional |
1-113 | 2.26e-09 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 53.44 E-value: 2.26e-09
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ND4 | MTH00014 | NADH dehydrogenase subunit 4; Validated |
2-118 | 6.66e-09 | |||
NADH dehydrogenase subunit 4; Validated Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 52.05 E-value: 6.66e-09
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ND4 | MTH00206 | NADH dehydrogenase subunit 4; Provisional |
1-115 | 1.39e-06 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 45.70 E-value: 1.39e-06
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ND4 | MTH00044 | NADH dehydrogenase subunit 4; Validated |
1-114 | 1.69e-06 | |||
NADH dehydrogenase subunit 4; Validated Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 45.35 E-value: 1.69e-06
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ND4 | MTH00204 | NADH dehydrogenase subunit 4; Provisional |
2-80 | 1.57e-03 | |||
NADH dehydrogenase subunit 4; Provisional Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 36.96 E-value: 1.57e-03
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Proton_antipo_M | pfam00361 | Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-52 | 8.92e-03 | |||
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla. Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 34.60 E-value: 8.92e-03
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Blast search parameters | ||||
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