|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-547 |
7.85e-137 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 408.76 E-value: 7.85e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 1 MLIMFTYMLFMFTSWFFLLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 81 FMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 SWNLMVYKFNLLMLILLMLV-------AFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYF 233
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIgllimlaAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 234 NKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSS 313
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 314 QDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFS 393
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 394 KKNYYV--NLIKKESILVNFCMFILLMTIFFMGYLYFKIFNLNYLILLTLNMKIMVMKLIFFGILIG-------QFFYFN 464
Cdd:MTH00165 403 DFNLKSlnNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGyelslmsLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 465 SFKMNKMGNFMSTMFYIEKIYQYYDI--PLNLIMLYENIHEKNLFEFKI------KFIKLKFYLFKYKLNEYNFLSMLLT 536
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISyyPLNLGSLSLKSFDQGWSEYFGgqglynFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 1899176104 537 NLLMMLIFIIL 547
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-485 |
1.81e-127 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 384.19 E-value: 1.81e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 1 MLIMFTYMLFMFTSWFFLLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 81 FMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 SWNLMVYKFNLLMLILLMLV---AFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYI 237
Cdd:MTH00151 163 HWSILSMWDFKLSGWLGLLLvlaAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 238 LL-ISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDI 316
Cdd:MTH00151 243 LLfISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 317 RCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKN 396
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMK 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 397 YYVNLIKK-ESILVNFCMFILLMTIFFMGYLYFKIFNL-NYLILLTLNMKIMVMKLIFFGILIGQFFY---FNSFKMNKM 471
Cdd:MTH00151 403 SSSLSSKSdEDFYVSLPMLLLSLGALIGGKLLQSLFEGfSEEFFLPSYLKLLIGFVILLGLFLSFGFWdsgFSSSKMVKL 482
|
490
....*....|....
gi 1899176104 472 GNFMSTMFYIEKIY 485
Cdd:MTH00151 483 SFFFSSMWFLSPLS 496
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-484 |
1.27e-106 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 330.45 E-value: 1.27e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 1 MLIMFTYMLFMFTSwfFLLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK 80
Cdd:MTH00209 3 KMQMFSLMLLFLFS--FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 81 FMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFG 160
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 SWNL----MVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF-LDYFNK 235
Cdd:MTH00209 161 NWNIfylnFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFsSPFFSM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 236 YILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQD 315
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 316 IRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKK 395
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 396 NYY-VNLIKKESILVNFCMFILLMTIFFMGYLYFKIFNLNYL-ILLTLNMKIMVMKLIFFGILIGQFFY---FNSFKMNK 470
Cdd:MTH00209 401 SSKsLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNsVVLPWFLKLLPIMLILFGVLLMYMVLkknFFLIKGYK 480
|
490
....*....|....
gi 1899176104 471 MGNFMSTMFYIEKI 484
Cdd:MTH00209 481 VNYFLSQMWFLPDL 494
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-461 |
1.06e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 325.95 E-value: 1.06e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 6 TYMLFMFTSWFFLLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRF 85
Cdd:MTH00207 11 SYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 86 IILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFGSWNLM 165
Cdd:MTH00207 91 ISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSIT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 166 VY---KFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF-LDYFNKYILLIS 241
Cdd:MTH00207 171 NMwqtDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSsTYWFNPALLLTA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 242 SLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGG 321
Cdd:MTH00207 251 SLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 322 VMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNY--YV 399
Cdd:MTH00207 331 LTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSspYH 410
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1899176104 400 NLIKKESILVNFCMFILLMTIFFMGYLYFKIFNLNYLILLTLNMKIMVMKLIFFGILIGQFF 461
Cdd:MTH00207 411 HLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLF 472
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
4-479 |
5.17e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 277.99 E-value: 5.17e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 4 MFTYMLFMFTSWFFLLTLIIFFKSKL--IMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKF 81
Cdd:MTH00211 29 LHIKKAVKLSFFISLIPLLIFLDQGLetILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPN 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 82 MNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLT-IFSNRIGDVGILLMITMGMMFG 160
Cdd:MTH00211 109 INRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLNL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 S-----WNLMVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDY-FN 234
Cdd:MTH00211 189 NsweisQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQlIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 235 KYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQ 314
Cdd:MTH00211 269 GAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQ 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 315 DIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSK 394
Cdd:MTH00211 349 DIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGY 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 395 KNYYVN--LIKKESILVNFCMFILLMTIFFMGYLYFKIFNLNYLIL-LTLNMKIMVMKLIFFGILIGQFFYFNSFKMNKM 471
Cdd:MTH00211 429 PRFLSLspINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKT 508
|
....*...
gi 1899176104 472 GNFMSTMF 479
Cdd:MTH00211 509 STLSFSNM 516
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
17-395 |
4.21e-77 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 254.69 E-value: 4.21e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 17 FLLTLIIFF-----KSKLIMLEWMiySYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVIL 91
Cdd:COG1009 42 FVLSLLLFPavlggEVVVELYTWI--PVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 92 FVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILL-MITMGMMFGSWNLMVYKF 169
Cdd:COG1009 120 FMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLgILLLGAIAGTLNFSELLA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 170 NLLMLILLMLV----------AFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIR-YNKFLFLDYFNKYIL 238
Cdd:COG1009 200 AAPTILSSPLLtlillllllgAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARlSPLFALSPVWLTVVA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 239 LISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRC 318
Cdd:COG1009 280 IIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA-TGTRDIRK 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899176104 319 YGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIME-LIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKK 395
Cdd:COG1009 359 MGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKP 436
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-391 |
4.76e-70 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 235.83 E-value: 4.76e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 1 MLIMFTYMLFMFTSwffLLTLIIFFKS--KLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEG 78
Cdd:MTH00004 34 TTIKTTVKLAFLIS---LIPLTLFLNSgtESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMAS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 79 DKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQN-EKAYNAGMLTIFSNRIGDVG-ILLMITMG 156
Cdd:MTH00004 111 DPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGrAEANTAALQAIIYNRIGDIGlILSMAWLA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 157 MMFGSWNL----MVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLfldY 232
Cdd:MTH00004 191 MTLNTWEIqqlfSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLL---Q 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 233 FNKYI----LLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIH 308
Cdd:MTH00004 268 NNQTAlticLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIH 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 309 NFNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIM 388
Cdd:MTH00004 348 NLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMIL 427
|
...
gi 1899176104 389 FIL 391
Cdd:MTH00004 428 LVQ 430
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
38-464 |
1.70e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 234.87 E-value: 1.70e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 38 SYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGL 117
Cdd:MTH00208 93 SNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGF 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 118 ISYCLIIYYQNEK-AYNAGMLTIFSNRIGDVGILLMITMGMM-FGSWNLM-VYKFNLLMLILLMLVAFT-------KSAQ 187
Cdd:MTH00208 173 LSFLLISWWTTRNdANSSALQAVIYNRIGDIGIILFLSLSLInFNSWNLNeILSLNNSNSFLINILLFGillaaagKSAQ 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 188 IPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFL-FLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALST 266
Cdd:MTH00208 253 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYST 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 267 LSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFM 346
Cdd:MTH00208 333 TSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFL 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 347 SGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYY-VNLIKKESILVNFCMFILLMTIFFMGY 425
Cdd:MTH00208 413 AGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSpLSPISEENPNLTNPLLRLAIGTIISGW 492
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1899176104 426 -LYFKIFNLNYLILLTLNmKIMVMKLIFFGILIGQFFYFN 464
Cdd:MTH00208 493 fFSNFVFNLPPLTLPLIL-KSLPLIVTIIGAAFSFSFLLS 531
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
30-426 |
4.40e-67 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 227.94 E-value: 4.40e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 30 IMLEWMiySYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTIL 109
Cdd:TIGR01974 63 SLFPWI--SVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLF 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 110 LGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILL-MITMGMMFGSWNLMVYKFNLLMLILLMLVAFT---- 183
Cdd:TIGR01974 141 FGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLgIFLIFWYFGTLNFQEVFALAPGAFFSALTLIClllf 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 -----KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNkFLFLDYFN--KYILLISSLTMFMAGLIANYEY 256
Cdd:TIGR01974 221 igamgKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTS-PLFELSPTalYLVTIIGAITALFAATVALVQN 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 257 DFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFS 336
Cdd:TIGR01974 300 DIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIG 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 337 LLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNLIKKESILV-NFCMFI 415
Cdd:TIGR01974 380 SLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVmLLPLIV 459
|
410
....*....|.
gi 1899176104 416 LLMTIFFMGYL 426
Cdd:TIGR01974 460 LAVGSVFAGFF 470
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
8-395 |
3.81e-65 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 223.11 E-value: 3.81e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 8 MLFMFTSwfFLLTLIIFFK--------SKLIMLEWMiySYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGD 79
Cdd:PRK06590 36 TGLVGLS--ALLSLVVFFDfllgggraFSQTLWTWI--SVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHD 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 80 KFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILL-MITMGM 157
Cdd:PRK06590 112 EGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALgIFLLFA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 158 MFGSWNL-----MVYKFNLLMLILLMLVAFT-------KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYN 225
Cdd:PRK06590 192 EFGSLNYdevfaAAPQFFGLGWSALTLICLLlfigamgKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 226 K-FLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVG 304
Cdd:PRK06590 272 PlFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 305 SFIHNFNSSQDIRCYGGVmyiypFKTMVLIFSL-----LCLMGFPFMSGYFSKDMIMELIFLNkMNLISMMLLIFSTIFT 379
Cdd:PRK06590 352 SVIHAMHHEQDIRKMGGL-----RKKMPVTYATfligtLALIGIPPFAGFFSKDEILEAAFAN-GHINLFVAGLVGAFLT 425
|
410
....*....|....*.
gi 1899176104 380 VSYSIRLIMFILFSKK 395
Cdd:PRK06590 426 AFYSFRLIFLVFHGKE 441
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
18-389 |
9.58e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 219.01 E-value: 9.58e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 18 LLTLIIFFKSKL--IMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVIS 95
Cdd:MTH00066 46 LIPLMIFINQGLesITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIA 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 96 MYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVG-ILLMITMGMMFGSWNL----MVYKF 169
Cdd:MTH00066 126 MMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGlILSMAWLAMNTNSWELqqifLLNDN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 170 NLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYI-LLISSLTMFMA 248
Cdd:MTH00066 206 STLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 249 GLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVMYIYPF 328
Cdd:MTH00066 286 AACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPI 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899176104 329 KTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMF 389
Cdd:MTH00066 366 TTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYF 426
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-487 |
3.12e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 215.94 E-value: 3.12e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 1 MLIMFTYMLFMFTSWFFLLTLIIFFKSKLIMLEWMIysynsmkFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK 80
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDF-------LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGEL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 81 FMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFG 160
Cdd:MTH00095 74 NFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 SWNLMVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYILLI 240
Cdd:MTH00095 154 YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 241 SSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYG 320
Cdd:MTH00095 234 GLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 321 GVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKnyyvN 400
Cdd:MTH00095 314 NNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFS----K 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 401 LIKKESILVNFCMFILLMTIFFMGYLYFKIFNLNYLILLTLNMKIMVMKLIFFGILIGQFFYFNSFKMNKMGNFMSTMFY 480
Cdd:MTH00095 390 VVNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFA 469
|
....*..
gi 1899176104 481 IEKIYQY 487
Cdd:MTH00095 470 KNVIYKL 476
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
14-468 |
6.18e-60 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 208.78 E-value: 6.18e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 14 SWFFLLTLIIFFKSKLIMLE-WMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILF 92
Cdd:MTH00020 41 SWSFLIFYEILFNSSTTYIKlWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 93 VISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILL-MITMGMMFGS------WNL 164
Cdd:MTH00020 121 TFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLaMFLLWDRFGSldfssvFNM 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 165 MVYKFNLLMLILLMLV---AFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYIL-LI 240
Cdd:MTH00020 201 VVSAPSSDITLICLFLfigAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIV 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 241 SSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYG 320
Cdd:MTH00020 281 GSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMG 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 321 GVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVN 400
Cdd:MTH00020 361 GLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKA 440
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1899176104 401 L---IKKESILVNFCMFILLMTIFFMGYLYFKI---FNLNYLILLTLNMKIMVMKLIFFGILIGQFFYFNSFKM 468
Cdd:MTH00020 441 VffhLHEGDWNLLLPLGILALGSIFVGYLAKEMiwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKT 514
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
16-390 |
6.48e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 200.83 E-value: 6.48e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 16 FF--LLTLIIFFKSKL----IMLEWMiysyNSMKFSFLIYL--DFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFII 87
Cdd:MTH00137 48 FFvsLLPLFLFLNQGAetiiTNWNWM----NTLTFDINISFkfDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 88 LVILFVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVG-ILLMITMGMMFGSWNL- 164
Cdd:MTH00137 124 YLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVIYNRVGDIGlILAMAWMATNLNSWEIq 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 165 ----MVYKFNLLMLILLMLVAFT-KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLfldYFNKYILL 239
Cdd:MTH00137 204 qifaLSKDFDLTLPLLGLILAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLM---ENNQTALT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 240 IS----SLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQD 315
Cdd:MTH00137 281 TClclgALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQD 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1899176104 316 IRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFI 390
Cdd:MTH00137 361 IRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFV 435
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
3-391 |
3.64e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 198.54 E-value: 3.64e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 3 IMFTYMLFMFTswfflLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFM 82
Cdd:MTH00108 40 ISYAFIISLIP-----TMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNI 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 83 NRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMM-FG 160
Cdd:MTH00108 115 NRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLnLN 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 161 SWNL-----MVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRynkFLFLDYFNK 235
Cdd:MTH00108 195 SWDLqqifmLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIR---FHPLMENNK 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 236 YILLI-----SSLTMFMAgLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNF 310
Cdd:MTH00108 272 TIQTLtlclgAITTLFTA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 311 NSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFI 390
Cdd:MTH00108 351 NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFA 430
|
.
gi 1899176104 391 L 391
Cdd:MTH00108 431 L 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
45-489 |
1.41e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 194.46 E-value: 1.41e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 45 SFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLII 124
Cdd:MTH00210 73 YFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLIN 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 125 YYQNE-KAYNAGMLTIFSNRIGDVGILLMITM----------GMMFGSWNLMVYKFNLLMLILLMLV-AFTKSAQIPFTL 192
Cdd:MTH00210 153 FWLTRiKANKAAIKAMLINRVGDIGLVLAMIMilkefgtlefSTISSLLVTNINKESLTIICLLLFIgAVGKSAQLGLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 193 WLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNK-FLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLS 271
Cdd:MTH00210 233 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 272 LMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVMYIYPFK-TMVLIFSLlCLMGFPFMSGYF 350
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTyVMILIGSL-SLMGFPYLTGFY 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 351 SKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILF----SKKNYYVNlIKKESILVNFCMFILLMTIFFMGYL 426
Cdd:MTH00210 392 SKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFItntnSKKEVFIG-VHESSWNITFPLLLLAFGSIFVGYL 470
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1899176104 427 YFKIFNLNYLILLTLN-MKIMVMKLIFFGILIGQFFYFNSFKMNKMGNFMSTMFYIEKIYQYYD 489
Cdd:MTH00210 471 GKEVVLSNVIPPIVPNsIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYTFLN 534
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
9-497 |
1.33e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 173.53 E-value: 1.33e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 9 LFMFTSWFFLLTLIIFFKSKLIMLEWMIYSynsmkFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIIL 88
Cdd:MTH00063 7 LLLCLLIFFLFLVGVSSSVSLNFLSFGGYS-----WLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 89 VILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFGSWNLmvyk 168
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSF---- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 169 fnlLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYILLISSLTMFMA 248
Cdd:MTH00063 158 ---LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFIT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 249 GLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVMYIYPF 328
Cdd:MTH00063 235 GVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSW 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 329 KTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMfILFSKKNYYVNLIKKESIL 408
Cdd:MTH00063 315 NLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCL-ILFGVKSSLSSGVRFLFFN 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 409 VNFCMFILLmtifFMGYLYFKIFNLNYLILLTLNMKIMVmkLIFFGILIGQFFYFNSFKMNKMGNFMSTMFYIEKIYQYY 488
Cdd:MTH00063 394 SGLMVFLWL----FINYYVFLLLDEVVYLGVFISLVLLL--VQLLGLLVGVLFYDSNLFSNWSSSLFGCDNLVELFYELF 467
|
....*....
gi 1899176104 489 DIPLNLIML 497
Cdd:MTH00063 468 YSILDLVSL 476
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
51-363 |
6.02e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 165.52 E-value: 6.02e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 51 DFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNE- 129
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 130 KAYNAGMLTIFSNRIGDVGILL-MITMGMMFGSWNLMVYKFNLLML------------------------ILLMLVAFTK 184
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILgMVLIYKTIGSLDFLTFNGGSVGSgimdrgyygggayesplapfaiigILLLIGCIGK 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 185 SAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYILLI-SSLTMFMAGLIANYEYDFKKIIA 263
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIA 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 264 LSTLSQLSLMMSILSL-GFWEMAFFHLVIHALFKSLMFLCVGSFIHNFN-SSQDIRCYGGVMYIYPFKTMVLIFSLLCLM 341
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIM 398
|
330 340
....*....|....*....|..
gi 1899176104 342 GFPFMSGYFSKDMIMELIFLNK 363
Cdd:MTH00032 399 GLPYLTGFYSKDLILELTYSGR 420
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
50-360 |
1.30e-42 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 161.73 E-value: 1.30e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 50 LDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQN 128
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDR 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 129 EKAYNAGMLTIFSNRIGDVGILLmitmGMMFGSWNLMVYKFNLLMLILLMLVA--------------------FTKSAQI 188
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLL----GILGLFWATGSFDFDGIADRLSELVSsgavsgwlalllcilvflgpMAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 189 PFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIR-YNKFLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTL 267
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARmYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTI 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 268 SQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNS--------SQDIRCYGGVMYIYPFKTMVLIFSLLC 339
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
330 340
....*....|....*....|.
gi 1899176104 340 LMGFPFMSGYFSKDMIMELIF 360
Cdd:PRK07376 405 ISGIPPFAGFWSKDEILGAAF 425
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
3-394 |
1.94e-38 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 150.38 E-value: 1.94e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 3 IMFTYMLFMFTSWFFLLTLIIFFkskLIMLEWMIYSYN------------SMKFSFLIYLDFYSMMFLMLVSLISMIVLI 70
Cdd:TIGR00940 17 ILYPSDQRIHIGWFVLAIPLVCF---LYTLGLYPYTASggvlhytidwvpELGLNFTLYMDGLALLFSLLITGIGVLVVL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 71 YSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYY-QNEKAYNAGMLTIFSNRIGDVGI 149
Cdd:TIGR00940 94 YSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhHRAHSRYGAQKSLTITVFGGLAM 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 150 LL-MITMGMMFGSWNL----------MVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGV 218
Cdd:TIGR00940 174 LGgLILLGKITGSFSIdaviasadaiRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 219 YLLIRYNK-FLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLG------------FWEMA 285
Cdd:TIGR00940 254 YLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGspsyhyqgddskIYALA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 286 F----FHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIF- 360
Cdd:TIGR00940 334 AvaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAIt 412
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1899176104 361 LNKMNLISM--------MLLIFSTIFTVSYSIRLIMFILFSK 394
Cdd:TIGR00940 413 AHLVNPFDTvtlgylfpYVATVASVFTFVYSLRFIHGVFFGR 454
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
44-390 |
9.94e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.13 E-value: 9.94e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 44 FSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLI 123
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 124 IYYQNEKAYNAGMLTIFSNRIGDVGILL-MITMGMMFGSWNL--------MVYKFNLLMLILLMLVAF-TKSAQIPFTLW 193
Cdd:COG0651 148 ALGGTKEALRAGLKYLILNLVGSALFLLgVGLLYGATGTLNMadlaarlaELDPGLLLAAFALLLVGFgIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 194 LPAAM-MAPTPVSSLVhSSTLVTAGVYLLIRYNKFLF----LDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLS 268
Cdd:COG0651 228 LPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 269 QLSLMMSILSLG---FWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSqDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPF 345
Cdd:COG0651 307 QIGYILLGLGLGtplGLAGALFHLLNHALAKALLFLAAGAIERATGTR-DLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1899176104 346 MSGYFSKDMIMELIFLNKMnLISMMLLIFSTIFTVSYSIRLIMFI 390
Cdd:COG0651 386 LSGFVSKWLLLQAALEAGA-WLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
45-387 |
1.81e-37 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 147.88 E-value: 1.81e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 45 SFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLII 124
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 125 YyQNEKAYNAGMLTIFSNRIGdvGILLMITMGMMF---GSWNLMVY----------KFNLLMLILLMLVAFTKSAQIPFT 191
Cdd:PRK12650 152 R-SGSGGEAGSIRTLILTFFG--GLTLLAAVAIAAtqtGTTSLSGIlhsdvwaekpGLTTVVAVLIAVAAFTKSAQFPFH 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 192 LWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKfLFLDYFNKYILLISS--LTMFMAGLIANYEYDFKKIIALSTLSQ 269
Cdd:PRK12650 229 FWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 270 LSLMMSILSLGF---WEMAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFM 346
Cdd:PRK12650 308 LGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1899176104 347 SGYFSKDMIMELIFLNKMNLISMMLLI----FSTIFTVSYSIRLI 387
Cdd:PRK12650 387 FGFVSKEGMLTAFLEAPGGNAGVVLLLvgaaLGAVFTFAYSARLV 431
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-377 |
1.90e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 144.29 E-value: 1.90e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 41 SMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISY 120
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 121 CLIIY-YQNEKAYNAGMLTIFSNRIGdvGILL---MITMGMMFGSWNL-MVYKFN---------LLMLILLMLVAFTKSA 186
Cdd:PRK12647 133 LLIGFnHEREAARRAALQALLVTGGG--GLALlagLILLGNVTGTYSLsELLASGdvirehplyLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 187 QIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDY-FNKYILLISSLTMFMAGLIANYEYDFKKIIALS 265
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPlWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 266 TLSQLSLMMSILSLGF---WEMAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMG 342
Cdd:PRK12647 291 TVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330 340 350
....*....|....*....|....*....|....*
gi 1899176104 343 FPFMSGYFSKDMIMELIFlnKMNLISMMLLIFSTI 377
Cdd:PRK12647 370 LPPLFGFLAKELIYEALL--EAPLWSLILTVAAVL 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
13-396 |
8.46e-34 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 136.42 E-value: 8.46e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 13 TSWFFLLTLIIFFKSKL--IMLEWMiysyNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK-FMNRFIILV 89
Cdd:PRK12646 41 SSIYFLIQIPSVAKLQYlsTSIPWM----KTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 90 ILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAG-----MLTIFSNRIGDVG-ILLMITMG------M 157
Cdd:PRK12646 117 TLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGaiqsfMITVFGGLALLVGfIMLYIMTGtnniteI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 158 MFGSWNLMVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYI 237
Cdd:PRK12646 197 LGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYI 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 238 LLISSL-TMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLG-------------FWEM----AFFHLVIHALFKSLM 299
Cdd:PRK12646 277 VTFVGLiTMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCAL 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 300 FLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIF----LNKMNLISMMLLIF- 374
Cdd:PRK12646 357 FMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqLSQFSLISMIIIVFi 435
|
410 420
....*....|....*....|....*
gi 1899176104 375 ---STIFTVSYSIRLIMFILFSKKN 396
Cdd:PRK12646 436 gviASIFTFTYALYMVKEVFWGKYD 460
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
13-395 |
1.83e-33 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 135.44 E-value: 1.83e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 13 TSWFFL---LTLIIFFKSKLIM----------LEWMiysyNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGD 79
Cdd:PRK12645 30 TGWFVLpvpVVLFIYFLSLIPTtmsgntvmktLPWI----PSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKK 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 80 K-FMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAG-----MLTIFSNRIGDVGILLMI 153
Cdd:PRK12645 106 KeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGaqksmLITVFGGLSMLGGFILLY 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 154 TMG-------MMFGSWNLMVYKFNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNK 226
Cdd:PRK12645 186 IMTgsfsireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTP 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 227 -FLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLG------------FWEMAF----FHL 289
Cdd:PRK12645 266 iFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslhyqgddskIYAAAItaaiFHL 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 290 VIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIF----LNKMN 365
Cdd:PRK12645 346 INHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnateANLFS 424
|
410 420 430
....*....|....*....|....*....|....*
gi 1899176104 366 LISMMLLI-----FSTIFTVSYSIRLIMFILFSKK 395
Cdd:PRK12645 425 LDTWGVLFpviawVASVFTFVYSIIFIFKTFFGKY 459
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-385 |
5.89e-33 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 134.28 E-value: 5.89e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 41 SMKFSFliYLDFYSMMFLMLVSLISMIVLIY-SIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLIS 119
Cdd:PRK12644 65 GLDLAF--RLDALAALMSLLVLGVGALVLLYcARYFDDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 120 YCLIIYYQNEK-----AYNAGMLTIFSNRIGDVGILLMitmGMMFGSWNL--MVYKFNLLMLILLMLV-----AFTKSAQ 187
Cdd:PRK12644 143 FLLIGHYAERAasrraALQALLVTTAGGLAMLVGIIIL---GQAAGTYRLseLLADPPTGPAVSVAVVlilvgALSKSAI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 188 IPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNK-FLFLDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALST 266
Cdd:PRK12644 220 VPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPgFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 267 LSQLSLMMSILSLGFWEMAFFHL---VIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGF 343
Cdd:PRK12644 300 VSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGL 378
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1899176104 344 PFMSGYFSKDMIME-LIFLNKMNLISMMLLI---FSTIFTVSYSIR 385
Cdd:PRK12644 379 PPLLGFVAKEAALEaVLHDGALGPAGPVVLAgivLGSILTVAYSLR 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-375 |
2.37e-32 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 125.89 E-value: 2.37e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 102 SPSFLTILLGWDGLGLISYCLIIYY-QNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFGSWNLMVYKFNLLML------ 174
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 175 ----ILLMLVAF-TKSAQIPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVYLLIRYNKFLFLDY--FNKYILLISSLTMF 246
Cdd:pfam00361 81 llllFLLILVGFlFKSAQVPFHTWLPDAYEgAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 247 MAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGF---WEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQDIRCYGGVM 323
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1899176104 324 YIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFS 375
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
45-387 |
4.70e-32 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 131.47 E-value: 4.70e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 45 SFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLII 124
Cdd:PRK12648 69 NLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 125 Y-YQNEKA-YNAGM-LTIfsnrIGDVGILL---MITMGMMFGSWNLMV-------------YkfnLLMLILLMLVAFTKS 185
Cdd:PRK12648 149 YwHHRADArRGARMaLTV----TGAGGLALlagVLLLGHIVGSYDLDVvlaagdlirahplY---PPALVLILLGAFTKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 186 AQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRynkfLF--LDYFNKYILLISS---LTMFMAGLIANYEYDFKK 260
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLAR----LWpvLAGTEEWFWIVGGaglITLLLGAYFALFQHDLKG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 261 IIALSTLSQLSLMMSILSLGFwEMA----FFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFS 336
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLGS-PLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVA 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1899176104 337 LLCLMGFPFMSGYFSKDMIM-ELIFLNKMNLISMMLLIFST---IFTVSYSIRLI 387
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFI 430
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
7-355 |
7.59e-30 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 122.39 E-value: 7.59e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 7 YMLFMFTSWFFLLTLII---FFKSKLIMLEWMIYSYNSMKFsFLIYLDFYSMMFLMLVSLISMIVLIYSIYYME------ 77
Cdd:PRK06525 28 ELGVLFAALTTLCMLSLayaFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnreh 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 78 -GDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGilLMITMG 156
Cdd:PRK06525 107 pVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLG--LYLAAA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 157 MMF---GSWNLMVYK-----FNLLMLILLMLVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYnkFL 228
Cdd:PRK06525 185 TLFlqtGTFALSALSglhgsLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 229 FLDYFNKYI----LLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFW--EMAF----FHLVIHALFKSL 298
Cdd:PRK06525 263 SMGPIPHVIgyvgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsRLALegsiAYIFNHAFAKSL 342
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1899176104 299 MFLCVGSFIHNFnSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMI 355
Cdd:PRK06525 343 FFLVAGALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPI 398
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-395 |
1.21e-28 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 120.70 E-value: 1.21e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 41 SMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISY 120
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 121 CLIIYYQN--EKAYNAGMLTIFSNRIGDVGILLMITMGMMFGSW-------------NLMVYKFNLLMLILLMLVAFTKS 185
Cdd:PRK12649 149 MLIGYWRHrpESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYdiatilqdselieNIKGHPLFLITLILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 186 AQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKflFLDYFNKYILLISS---LTMFMAGLIANYEYDFKKII 262
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHP--IFSGTEAWFILVSGtgmITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 263 ALSTLSQLSLMMSILSLGFWE-------MAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIF 335
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVASI 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1899176104 336 SLLCLMGFPFMSGYFSKDMIMEL------IFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKK 395
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFYETsvemgaLIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGER 451
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
33-355 |
1.16e-26 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 114.60 E-value: 1.16e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 33 EWMIYSYNSMKFSFLIylDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGW 112
Cdd:CHL00025 74 SWTINNDFSLEFGYLI--DPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFW 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 113 DGLGLISYCLI-IYYQNEKAYNAGMLTIFSNRIGDVGILLMItMGM--MFGSW----------NLMVYkfNLLMLILLML 179
Cdd:CHL00025 152 ELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGI-LGFywITGSFefrdlfeifnNLIYN--NEVNLLFATL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 180 VAF-------TKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIR-YNKFLFLDYFNKYILLISSLTMFMAGLI 251
Cdd:CHL00025 229 CAFllflgpvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITALLGATL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 252 ANYEYDFKKIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNF--------NSSQDIRCYGGVM 323
Cdd:CHL00025 309 ALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLR 388
|
330 340 350
....*....|....*....|....*....|..
gi 1899176104 324 YIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMI 355
Cdd:CHL00025 389 KYMPITKTTFLLGTLSLCGIPPLACFWSKDEI 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-427 |
3.36e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.13 E-value: 3.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 50 LDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNE 129
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 130 K-AYNAGMLTIFSNRIGD-------------VGILLMI-----TMGMMFGSWNLMV--YKFNLLMLILLMLVAFT-KSAQ 187
Cdd:PRK12667 160 GdAVEAAIKYALIGAVGTtlyflalaflyatFGTLNMAdlsakIRGLSFPLTGGLAgnPPLALGVALALALWAFTiKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 188 IPFTLWLPAAM-MAPTPVSSLVhSSTLVTAGVYLLIRYNKFLF---------LDYFNKYILLISSLTMFMAGLIANYEYD 257
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFgispslidfRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 258 FKKIIALSTLSQLSLMMSILSLGF---WEMAFFHLVIHALFKSLMFLCVGSFIHNFNsSQDIRCYGGVMYIYPFKTMVLI 334
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 335 FSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSiRLIMFILFSKKNYYVNLIKKESILVNFCMF 414
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYF-RAWYSLFFGKPKSGEEVEHKESPSMSVVIL 476
|
410
....*....|...
gi 1899176104 415 ILLMTIFFMGYLY 427
Cdd:PRK12667 477 VLALAVLILGILA 489
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-394 |
4.08e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.57 E-value: 4.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 50 LDFYSMMFLMLVSLISMIVLIYSIYYmeGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNE 129
Cdd:PRK08375 75 ADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 130 KAYNAGMLTIFSNRIGdvGILLMITMGMMF---GSWNLMVYKfNLLMLILLMLVAF--------TKSAQIPFTLWLPAAM 198
Cdd:PRK08375 153 RALAAARKYLIVGLIG--STFLLIGVGLLYgvtGTLNMADLA-GALAENPTVVTAFgfvllalaLKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 199 MAPTPVSSLVHSSTLVTAGVYLLIR-YNKFLFLDYFNKYILL-----ISSLTMFMAGLIANYEYDFKKIIALSTLSQLS- 271
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRiYFTVFGGDFRFALGLGwllavLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGy 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 272 --LMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQdIRCYGGVMYIYPFkTMVLIFSL-LCLMGFPFMSG 348
Cdd:PRK08375 310 ilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR-LSELSGLGRRMPL-TAAAFAVAsLSLIGVPPTSG 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1899176104 349 YFSKDMIMELIfLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSK 394
Cdd:PRK08375 388 FVSKWYLVVGA-VEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGP 432
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
47-305 |
3.09e-20 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 93.99 E-value: 3.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 47 LIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYY 126
Cdd:PRK08168 64 WLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 127 QNEKAynaGMLTIFSNRIGD--VGILLMITMGMMF---GSWNLMVYKFNLLMLILLMLVAFT----------KSAQIPFT 191
Cdd:PRK08168 144 PDRPF---ARLAAHKKFIADrlAELLLLAAAALAYlevGSLSLSALWAHLAAQGASPSLQAAalllvlavilKTAQLPVH 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 192 LWLPAAMMAPTPVSSLVHSStLVTAGVYLLIRYNKFLFLDYFNKYILLI-SSLTMFMAGLIANYEYDFKKIIALSTLSQL 270
Cdd:PRK08168 221 GWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQM 299
|
250 260 270
....*....|....*....|....*....|....*
gi 1899176104 271 SLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGS 305
Cdd:PRK08168 300 GFMLLECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
17-360 |
2.64e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 91.72 E-value: 2.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 17 FLLTLIIFFKSKLIMLEWMIYSynsmKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYY---MEGDKFMNRFIILVILFV 93
Cdd:PRK08667 46 FAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFI 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 94 ISMYLMILSPSFLTILLGWDGLGLISYCLIIY-YQNEKAYNAGMLTIFSNRIGDVGILLM-ITMGMMFGSWNLMVYKFNL 171
Cdd:PRK08667 122 LSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGiIVLFIQTGSFELSPLGASA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 172 LMLILLMLVAF----TKSAQIPFTLWLPAAMMA-PTPVSSLVhSSTLVTAGVYLLIRYNKFLFLD--YFNKYILLISSLT 244
Cdd:PRK08667 202 GILSLVFLLLFlgfgIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPelWWGVLILLAGSIS 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 245 MFMAGLIANYEYDFKKIIALSTLSQLSL-----------------MMSILSLGfweMAFFHLVIHALFKSLMFLCVGSFI 307
Cdd:PRK08667 281 ALLGVIYALKEHDLKGLLAYSSIENIGIilmgiglyvifgvygldTLALLALG---GALFHSLNHALFKSLLFLTAGSVV 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1899176104 308 HNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIF 360
Cdd:PRK08667 358 HA-TGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-357 |
3.96e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 90.40 E-value: 3.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 44 FSFLIYLDFYSMMFLMLVSLISMIVLIYSIyymegDKFMNRFI-ILVILFVISMYLMILSPSFLTILLGWDGLGLISYCL 122
Cdd:PRK07234 59 FGVTLRADALSGYFILTNALVTLAVIFYCW-----ESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 123 IIYYQNEKAYNAGMLTIFsnrIGDVGILLMItMGMMfgswnlMVYKFNLLMLILLMLVA------------FTKSAQIPF 190
Cdd:PRK07234 134 VAYPRTDRAIWVGLRYLF---YSNVAMLFYL-IGAV------LVYQANGTFAFSGLATAdpeafalialglLVKGGIFVS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 191 TLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRynkfLFLDYFNKYILL--ISSLTMFMAGLIANYEYDFKKIIALSTLS 268
Cdd:PRK07234 204 GLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR----CALDVPGLDLIVriFGVGTALLGVLFALLEKDLKRMLAFSTIS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 269 QLSLMMSILSLGfwemAFFHLViHALFKSLMFLCVGSfIHNFNSSQDIRCYGGVmyiypFKTMVLIFSLLCLMGFPFMSG 348
Cdd:PRK07234 280 QLGFILAAPLVG----GLYALA-HGLVKSTLFLCAGA-LPSRNFTELISQMLGI-----GKWIPLTMASFSIAGFPLLAG 348
|
....*....
gi 1899176104 349 YFSKDMIME 357
Cdd:PRK07234 349 FVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-431 |
1.60e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 88.33 E-value: 1.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 44 FSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMN--RFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYC 121
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 122 LIIYYQNEKAYNAG-----MLTIFSNRIGDVGILLMITMGMMFGSWNLMVYKFNLLMLILLMLV-AFTKSAQIPFTLWLP 195
Cdd:PRK06589 155 LIGHTRNNISLSGGykylkILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIyGIAKTAIFPVHSWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 196 AAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF-LDYF------NKYILLISSLTMFMAGLIANYEYDFKKIIALSTLS 268
Cdd:PRK06589 235 AAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFgLSYLqrifaeFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTIS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 269 QLSLMM---SILSLGFWEMAFFHLVIHALFKSLMFLCVGSfIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPF 345
Cdd:PRK06589 315 QLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 346 MSGYFSKDMIMELIFLNK---MNLISMMLLIFSTIFTVSYSIRLIMFILFSK--KNYYVNLIKKESILVNFCMFILLMTI 420
Cdd:PRK06589 394 FSGFISKFLILLAASEQNqpwLSIIVMLVVIASSILSALYLLKILSSIYKPSlsENSFITKSLPYLMQISVITCCCALTL 473
|
410
....*....|.
gi 1899176104 421 FFMGYLYFKIF 431
Cdd:PRK06589 474 FYFIQILIREF 484
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-424 |
4.24e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 80.91 E-value: 4.24e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 50 LDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQNE 129
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 130 -KAYNAGMLTIFSNRIGDVGILLMItmGMMFGSWNL--MVY-----KFNLLMLILLMLVAFT-----KSAQIPFTLWLPA 196
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGI--ALLYGQYGTlnMAYlavkmSENPTVVAKIALALFIaglamKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 197 AM-MAPTPVSSLVHSSTLvtAGVYLLIRYNKFLFLDYFNK-----YILLISSLTMFMAGLIANYEYDFKKIIALSTLSQL 270
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 271 SLMM-----SILSLGFWEM----------AFFHLVIHALFKSLMFLCVGSFIHNFNSSqDIRCYGGVMYIYPFKTMVLIF 335
Cdd:PRK08376 324 GYMLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGTR-NLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 336 SLLCLMGFPFMSGYFSKDMIMELIFLnkMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNLIKKESILVNFCMFI 415
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPMLI 480
|
....*....
gi 1899176104 416 LLMTIFFMG 424
Cdd:PRK08376 481 LAIAIIGMG 489
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
48-424 |
1.48e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 75.96 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 48 IYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKfMNRFIILVILFVISMYLMILSPSFLTILLGWDGLGLISYCLIIYYQ 127
Cdd:PRK08377 74 LYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 128 NEKAYNAGMLTIFSNRIGD-------------VGILLMITMGMMFGSWNLMVYKFNLLMLILLMLVaftKSAQIPFTLWL 194
Cdd:PRK08377 153 TGEAAEASMKYIVLGGIGSsffligvaliygaTGTLNMAHIAQLAGTIDPTVAQVGLALLIFGLAV---EAELFPLNAWA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 195 PAAMM-APTPVSSLVhSSTLVTAGVYLLIRYNKFLF----LDYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQ 269
Cdd:PRK08377 230 PDAYQaAPHPITVMF-SAFVVKAGLYAMARILYLMQnangWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 270 LSLMMSILSLGFW---EMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQdIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFM 346
Cdd:PRK08377 309 VGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLF 387
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899176104 347 SGYFSKDMIMeLIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVnlikKESILVNFCMFILLMTIFFMG 424
Cdd:PRK08377 388 NVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGERI----RENAAIGIILLLLAALIVVIG 460
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
58-321 |
3.35e-14 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 75.33 E-value: 3.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 58 LMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYLMILSPS-FLT-ILLgwDGLGLISYCLIIYYQNEKAYNAG 135
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSlFFSyVLL--EILTLSTYLLVGFWYAQPLVVTA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 136 MLTIF-SNRIGDVgILLM--ITMGMMFGSWNLM-VYKFNLLMLILLMLVAFT----------KSAQIPFTLWLPAAMMAP 201
Cdd:PRK07390 173 ARDAFlTKRVGDL-LLLMgvVALSPLAGTLNFSdLAAWAATANLDPLTATLLglaliagptgKCAQFPLHLWLDEAMEGP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 202 TPvSSLVHSSTLVTAGVYLLIRYNKFLFLDYF-NKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLG 280
Cdd:PRK07390 252 NP-ASILRNSVVVATGAWVLIKLQPVLALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ 330
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1899176104 281 FWEMAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGG 321
Cdd:PRK07390 331 QPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGG 370
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
186-313 |
1.98e-12 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 69.68 E-value: 1.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 186 AQIPFTLWLPAAMMAPTPVSSLVHSStLVTAGVYLLIRYNKfLFLDYFNKYILLI-SSLTMFMAGLIANYEYDFKKIIAL 264
Cdd:PRK08601 219 AQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIfASISVLIGTGISLVQVDYKRQLVG 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1899176104 265 STLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHNFNSS 313
Cdd:PRK08601 297 STMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIV 345
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
46-308 |
2.55e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 69.53 E-value: 2.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 46 FLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDK---------FMNrfiilviLFVISMYLMILSPSFLTILLGWDGLG 116
Cdd:PRK06521 74 FHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEgkgpgamgfFYN-------LFLASMVLVLLADDAFSFLVAWETMS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 117 LISYCLIIYYQNEKA-YNAGMLTIFSNRIGDVgiLLMITMGMMFGSWNlmVYKF----NLLMLILLMLVAF--------T 183
Cdd:PRK06521 147 LSSWFLVIANHREAEiRRAGFLYLLMAHAGAL--AILLAFGLLARESG--SYDFaamrAAHLSPFWASLVFllalfgfgA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFTLWLPAAM-MAPTPVSSLVhSSTLVTAGVYLLIRYNkFLFL---DYFNKYILLISSL-TMFMAGLIANYEYDF 258
Cdd:PRK06521 223 KAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV-FDLLgapGWWWGVLVLALGAiSAVLGVLYALAEHDL 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1899176104 259 KKIIALSTLSQLSLMMSILSLGfweMAF-----------------FHLVIHALFKSLMFLCVGSFIH 308
Cdd:PRK06521 301 KRLLAYSTIENIGIIFVGLGLA---MVFiaygmpllaalaltaalYHLLNHALFKSLLFLGAGAVLH 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
189-424 |
9.47e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.41 E-value: 9.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 189 PFTLWLP-AAMMAPTPVSsLVHSSTLVTAGVYLLIRYNKFLFLD---YFNKYILLISSLTMFMAGLIANYEYDFKKIIAL 264
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGS-VLLAGVLLKMGGYGLLRFALPLFPEasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 265 STLSQLSLMMsilsLGFWEM-------AFFHLVIHALFKSLMFLCVGsFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSL 337
Cdd:COG1008 306 SSVSHMGFVL----LGIFALnplglqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 338 LCLMGFPFMSGYFSKDMIMELIFlnKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNLIKKESILVNFCMFILL 417
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAF--QVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLA 458
|
....*..
gi 1899176104 418 MTIFFMG 424
Cdd:COG1008 459 ALILLLG 465
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
181-444 |
2.35e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.17 E-value: 2.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 181 AFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVY-------------LLIRYNKFLFLDYFNKYILLISSLTMFM 247
Cdd:PRK08668 206 GVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYgfllvlyvlpgtkLFSEFGTYRGVPLFNYILAWLGNISIIV 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 248 AGLIANYEYDFKKIIALSTLSQLSLMMSILSLGF---WEMAFFHLVIHALFKSLMFLCVGSFIHNFNSSQdIRCYGGVMY 324
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 325 IYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVsYSIRLIMFILFSKKNYYVNLIKK 404
Cdd:PRK08668 365 KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YVFRPLAGVFLGQLPSDHKDVKE 443
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1899176104 405 ESILVNFCMFILLMTIFFMGYLYFKIFNLNYLILLTLNMK 444
Cdd:PRK08668 444 APLPMLIPMAILVLLNVVFGVAPGLVLQEINKIFGELGIG 483
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
12-352 |
7.19e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 61.29 E-value: 7.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 12 FTSWFFLLTLIIFFksklIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKfMNR--FIILV 89
Cdd:COG1007 34 LLAGLALLGLLLAL----ALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG-LLRgeFYALL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 90 ILFVISMYLMILSPSFLTILLGWDGLGLISYCLI-IYYQNEKAYNAGM----LTIFSNrigdvGILLMitmGMMF----- 159
Cdd:COG1007 109 LFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSS-----GFLLY---GISLlygat 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 160 GSWNLMVYKFNLLMLILLMLVAFT-----------KSAQIPFTLWLP-AAMMAPTPVSSLVhsSTLV-TAGVYLLIRYNK 226
Cdd:COG1007 181 GSLNLAGIAAALAAGGANSPLLLLglvlvlaglafKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLV 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 227 FLFL---DYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLGFWEM---AFFHLVIHALFKSLMF 300
Cdd:COG1007 259 EAFPglaADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaALFYLLAYLFMNLGAF 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1899176104 301 LCVGSFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSK 352
Cdd:COG1007 339 AVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-357 |
3.78e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 52.66 E-value: 3.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 180 VAF-TKSAQIPFTLWLPAAM-MAPTPVSSlVHSSTLVTAGVYLLIRYNKFLFL-DYFNKYILLISSLTMFMAGLIANYEY 256
Cdd:PRK12665 217 VAFgIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPgGGLDTLLMVVALLTMVVGILGAIAQS 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 257 DFKKIIALSTLSQLSLMMSILSLGFWE---MAFFHLVIHALFKSLMFLCVGsFIHNFNSSQDIRCYGGVMYIYPFKTMVL 333
Cdd:PRK12665 296 DIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLF 374
|
170 180
....*....|....*....|....
gi 1899176104 334 IFSLLCLMGFPFMSGYFSKDMIME 357
Cdd:PRK12665 375 FVPALNLGGIPPFSGFIGKVALLE 398
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
40-85 |
4.35e-07 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 46.65 E-value: 4.35e-07
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1899176104 40 NSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRF 85
Cdd:pfam00662 5 GDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-377 |
3.01e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.95 E-value: 3.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 183 TKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF---LDYFNKYILLISSLTMFMAGLIANYEYDFK 259
Cdd:PRK07691 221 TKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFshdTSFTHYLILILALLTIIFGVIGAVAYFDIK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 260 KIIALSTLSQLSLMMSILSLGFWEM---AFFHLVIHALFKSLMFLCVGSFIHnFNSSQDIRCYGGVMYIYPFKTMVLIFS 336
Cdd:PRK07691 301 KIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIA 379
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1899176104 337 LLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTI 377
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLL 420
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
188-392 |
5.97e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.05 E-value: 5.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 188 IPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYILLISSLTMFM---AGLIANYEYDFKKIIAL 264
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAiiyGALVALAQTDIKKLIAY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 265 STLSQlslmMSILSLGFWEM-------AFFHLVIHALFKSLMFLCVGsFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSL 337
Cdd:PRK05846 308 SSISH----MGFVTLGIFAGnqlgiqgAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFA 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1899176104 338 LCLMGFPFMSGYFSKDMIMELIFlnKMNLISMMLLIFSTIFTVSYSIRLIMFILF 392
Cdd:PRK05846 383 MASLGLPGTSGFVGEFLILLGSF--QVNPVIAFIATTGLILAAVYSLWLYQRVMF 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-396 |
8.17e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 48.74 E-value: 8.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 105 FLTILLGWDGLGLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVgILLMITMGMMFGSWNLMVYKFNLLMLILLMLVAF-- 182
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGV-LLLAGILLHYAETGSFAFGAIAGLGGTAAWLILIgf 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 183 -TKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRynkflflDYFNKYILLISSLTMFMAGLI-ANYEYDFKK 260
Cdd:PRK12668 194 gVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-------AFPGTELLIYIGAAMAVYGVFfALLENDLRR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 261 IIALSTLSQLSLMMSILSLGFwEM----AFFHLVIHALFKSLMFLCVGSFIHnfnSSQDIRCY--GGVMYIYPFKTMVLI 334
Cdd:PRK12668 267 LLSYHIVSQVGYMVAGIGIGT-ALaingAVAHAFNHILYKGLLFMSAGAVLY---RTGTEKLTelGGLYRSMPLTALFCL 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1899176104 335 FSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKN 396
Cdd:PRK12668 343 VGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFGGDS 404
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
146-360 |
1.33e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.90 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 146 DVGILLMITMGMMFGS--WNLMVYKFNLLmlillmlvaftkSAQIPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVY--- 219
Cdd:PRK08042 165 DLRLLDMRMQQLPLGSdiWLLGVIGFGLL------------AGIIPLHGWVPQAHAnASAPAAALF-STVVMKIGLLgil 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 220 --LLIRYNKFLfldYFNKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMM---------------SILSLGFW 282
Cdd:PRK08042 232 tlSLLGGNAPL---WWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILlglgagvtgialeqpALIALGLV 308
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899176104 283 EmAFFHLVIHALFKSLMFLCVGSFIHNfNSSQDIRCYGGVMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIF 360
Cdd:PRK08042 309 G-GLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
184-433 |
1.91e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 47.37 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF---LDYFNKYILLISSLTMFMAGLIANYEYDFKK 260
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFpaaSEYFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 261 IIALSTLSQlslmMSILSLGFWE-------MAFFHLVIHALFKSLMFLCVgSFIHNFNSSQDIRCYGGVMYIYPFKTMVL 333
Cdd:MTH00204 302 LIAYSSVAH----MGLVPLGLFThtieglvAAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIM 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 334 IFSLLCLMGFPFMSGYFSKdmIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNLIKKESILVNFCM 413
Cdd:MTH00204 377 LVLSLANMGFPLSCNFVGE--FFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAI 454
|
250 260
....*....|....*....|
gi 1899176104 414 FILLMTIFFMGYLYFKIFNL 433
Cdd:MTH00204 455 LPLIIAIFLLGIVPFIIIDL 474
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
184-392 |
7.35e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.33 E-value: 7.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFtLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFL---DYFNKYILLISSLTMFMAGLIANYEYDFKK 260
Cdd:PRK12663 220 KAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIGALGALAYKDIRR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 261 IIALSTLSQLSLMMSILSLGFW---EMAFFHLVIHALFKSLMFLCVGSFIHnFNSSQDIRCYGGVMYIYPFKTMVLIFSL 337
Cdd:PRK12663 299 IAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILI 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1899176104 338 LCLMGFPFMSGYFSKDMIMELIfLNKMNLISMMLLIFSTIFTVsYSIRLIMFILF 392
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQGA-LDNGAYILLALMLITSLITM-YSLFRIFFLAY 430
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
234-433 |
1.42e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 44.04 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 234 NKYILLISSLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSLG--FWEMAFFHLVIHALFKSLMFLCVGSFIHNFN 311
Cdd:MTH00160 143 NNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISenLWLIYFLIYSIISLSIILLFNKFNIFFLNQL 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 312 SSQdircyggvMYIYPFKTMVLIFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLIsMMLLIFSTIFTVSYSIRLIMFIL 391
Cdd:MTH00160 223 FNS--------NNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFL-LFILIMSSLITLYFYLRISYSSL 293
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1899176104 392 FSKKNYYVNLIKKESILVNFCMFILLMTIFFMGYLYFKIFNL 433
Cdd:MTH00160 294 MLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
183-424 |
1.92e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 44.15 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 183 TKSAQIPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVYLLIRY----NKFLFLDYFNKYILLISSLTMFMAGLIANYEYD 257
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYyiliDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 258 FKKIIALSTLSQLSLMMSILSLGfWEMAFF----HLVIHALFKSLMFLCVGSfIHNFNSSQDIRCYGGVMYIYPFKTMVL 333
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGN-VLQKYGTRDINVIRGLLKVSPLTGWGL 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 334 IFSLLCLMGFPFMSGYFSKDMIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILfsKKNYYVNLIKKESILVNFCM 413
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVF--GEPPEAVNRGDLGWLTTSPM 460
|
250
....*....|.
gi 1899176104 414 FILLMTIFFMG 424
Cdd:PRK06458 461 FVHLVLVLVLG 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
184-432 |
2.37e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 40.42 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLD---YFNKYILLISSLTMFMAGLIANYEYDFKK 260
Cdd:MTH00217 219 KIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaseYFSPLIQTLSLLAIIYGSLTTCRQVDLKR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 261 IIALSTLSQLSLM-MSILSLGF--WEMAFFHLVIHALFKSLMFLCVgSFIHNFNSSQDIRCYGGVMYIYPFKTMVLIFSL 337
Cdd:MTH00217 299 IIAYSSVAHMGLVtLGIFSHTIqgLVAAIFLMLAHGLVSSALFIAV-TFLYERHHTRLIKYYRGMVITMPLFGILMLLLV 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 338 LCLMGFPFMSGYFSKdmIMELIFLNKMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNLIKKESILVNFCMFILL 417
Cdd:MTH00217 378 LANASIPLSCNFVGE--FLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLLPLV 455
|
250
....*....|....*
gi 1899176104 418 MTIFFMGYLYFKIFN 432
Cdd:MTH00217 456 FLIYLMGIFPFIIID 470
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
184-356 |
2.69e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.51 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFL----FLDYFNKYILLISSLTMFMAGLIANYEYDFK 259
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLK 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 260 KIIALSTLSQLSLMMSILSLG-----FWemAFFHLVIHALFKSLMFLCVGsFIHNFNSSQDIRCYGGVMYIYPFKTMVLI 334
Cdd:PRK08676 299 KLIAFSSIEHMGLMLLGIGIGtplalFW--MLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVI 375
|
170 180
....*....|....*....|..
gi 1899176104 335 FSLLCLMGFPFMSGYFSKDMIM 356
Cdd:PRK08676 376 LGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
11-279 |
3.61e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.16 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 11 MFTSWFFLLTLIIFFKSKLIMLEWMIYSYNSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNrfiILVI 90
Cdd:PRK06459 3 LYILPVFLISILLSIFNKKASYILTMISSIILLITSIYEYNGVLSFFSIISTIVWILASLYSIEYDHYGKWLS---SLYI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 91 LFVISMYLMILSPSFLTILLGWDGLGLISYcLIIYYQNEKAYNAGMLTIFsnriGDVGILLMITmGMMFGSWNLMVYKFN 170
Cdd:PRK06459 80 LTILGMAIVLTSDNYLLFLAGWEIMTIPSY-VAIALTKKNKRPAFVFMAF----GELSTVLILA-GFAWAFIISGTTNFS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 171 LLMLILLMLVA----FTKSAQIPFTL--WLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLF---LDYFNKYILLIS 241
Cdd:PRK06459 154 YLPSPVPLILAsfgfIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQtipIGYFGLTILAIG 233
|
250 260 270
....*....|....*....|....*....|....*...
gi 1899176104 242 SLTMFMAGLIANYEYDFKKIIALSTLSQLSLMMSILSL 279
Cdd:PRK06459 234 AFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGL 271
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-428 |
4.42e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.50 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 19 LTLIIFFKSKLIMLEWMIYSYnSMKFSFLIYLDFYSMMFLMLVSLISMIVLIYSIYYMEGDKFMNRFIILVILFVISMYL 98
Cdd:MTH00094 1 LSLLFFFSPFLFFLFLMFFSF-LMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 99 MILSPSFLTILLGWDGLgLISYCLIIYYQNEKAYNAGMLTIFSNRIGDVGILLMITMGMMFGSWNLMVYKFNLLMLILLM 178
Cdd:MTH00094 80 VSSNMLMLYMFFELSMF-PILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMFFILS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 179 LVAFTKSAQIPFTLWLPAAMMAPTPVSSLVHSSTLVTAGVYLLIRYNKFLFLDYFNKYILlISSLTMFMAGLIANYEYDF 258
Cdd:MTH00094 159 LSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNFWII-FSLLGMILSSFCCVFQSDS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 259 KKIIALSTLSQLS---LMMSILSLGFWEMAFFHLVIHALFKSLMFLCVGSFIHnFNSSQDIRCYGGVMYIYPFKTMVLIF 335
Cdd:MTH00094 238 KSLAAYSSVTHMSfllLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYH-ISKSRLIYFMNSFFSSSMFFGLIFSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 336 SLLCLMGFPFMSGYFSKDMIMELIFLnkMNLISMMLLIFSTIFTVSYSIRLIMFILFSKKNYYVNlikkeSILVNFCMFI 415
Cdd:MTH00094 317 VFLSNSGVPPSLSFFSEFLIISNSFM--KNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFN-----NFNVGLSLPL 389
|
410
....*....|...
gi 1899176104 416 LLMTIFFMGYLYF 428
Cdd:MTH00094 390 VFMMFNMFWLSLF 402
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
180-352 |
5.13e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 39.65 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 180 VAFtKSAQIPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVYLLIRYNKFLFLDYFNKYILLISSL---TMFMAGLIANYE 255
Cdd:PRK02504 220 IAF-KISAVPFHQWTPDVYEgSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALailSMVLGNVVALAQ 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 256 YDFKKIIALSTLSQLSLMMSILSL----GFWEMAFFHLVIhaLFKSL-MFLCVGSFIHNFNSSQdIRCYGGVMYIYPFKT 330
Cdd:PRK02504 298 TSMKRMLAYSSIGQAGFVMIGLVAgteaGYASMVFYLLAY--LFMNLgAFACVILFSLRTGTDQ-ISDYAGLYQKDPLLT 374
|
170 180
....*....|....*....|..
gi 1899176104 331 MVLIFSLLCLMGFPFMSGYFSK 352
Cdd:PRK02504 375 LGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
184-352 |
6.89e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 39.22 E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 184 KSAQIPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVYLLIRYNKFLFLDYFNKYILL---ISSLTMFMAGLIANYEYDFK 259
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNEWHLLleiLAILSMILGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 260 KIIALSTLSQLSLMMSILSLGFWEMAFFHLVIHALFKSLM----FLCVGSFIHNFNSSQdIRCYGGVMYIYPFKTMVLIF 335
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMnlgtFACIVLFGLRTGTDN-IRDYAGLYTKDPFLALSLAL 384
|
170
....*....|....*..
gi 1899176104 336 SLLCLMGFPFMSGYFSK 352
Cdd:CHL00049 385 CLLSLGGIPPLAGFFGK 401
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
188-355 |
7.77e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 38.91 E-value: 7.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 188 IPFTLWLPAAMM-APTPVSSLVhSSTLVTAGVYLLIRYNKFLFLD---YFNKYILLISSLTMFMAGLIANYEYDFKKIIA 263
Cdd:PRK06473 222 VPFHTWLPDAHVeASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEawvYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899176104 264 LSTLSQLSLM---------MSILSlgfwemAFFHLVIHALFKSLMFLCVGsFIHNFNSSQDIRCYGGVMYI---YPFKTM 331
Cdd:PRK06473 301 YSSIGHMGYIllaaaaatpLSILA------AVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPergLPITGS 373
|
170 180
....*....|....*....|....
gi 1899176104 332 VLIFSLLCLMGFPFMSGYFSKDMI 355
Cdd:PRK06473 374 LMILGVMASAGIPGMVGFIAEFLV 397
|
|
|