|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 694.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 81 QNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 161 LIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 321 LTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1904996158 401 FLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELISAT 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 581.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 81 QNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 161 LIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 321 LTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1904996158 401 FLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELIS 455
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 571.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 81 QNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 161 LIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 321 LTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1904996158 401 FLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKII 454
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
3.39e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 475.98 E-value: 3.39e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLT-PTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 80 SQNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 160 LLIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 240 GYGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 320 GLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAV 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1904996158 400 TFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELI 455
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
7.36e-161 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 462.10 E-value: 7.36e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 3 KIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHN-KNSTLWTGIDQISSPLLVLSCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGwSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 82 NHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 162 IAILHIHTQTGTLHLTMIKLAHPTphiSWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 242 GIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 322 TSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTF 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1904996158 402 LTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.03e-142 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 415.53 E-value: 2.03e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWT-GIDQISSPLLVLSCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSlATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 80 SQNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 160 LLIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 240 GYGIIRASTL-TGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIA 318
Cdd:MTH00044 241 GYGLIRLINLfSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 319 HGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGA 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1904996158 399 VTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELIS 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
2.14e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 350.99 E-value: 2.14e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPtaiLSPPKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNStLWTGIDQISSPLLVLSCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNIS-YFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 81 QNHLQQEPPTRKQIFISTMILAqpFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 161 LIAILHIHTQTGTLHLTMIKLahptphISWSNLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 321 LTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1904996158 401 FLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-455 |
9.11e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 335.66 E-value: 9.11e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 55 WTGIDQISSPLLVLSCWLLPLMILASQNHLQQEppTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQKSVKLR--NKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 135 RWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPtpHISWSNLMLCLAMMtAFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRK--LLSSMGLWGLLVFL-AFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 295 GLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTIN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 375 LMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
.
gi 1904996158 455 S 455
Cdd:MTH00150 414 F 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-456 |
1.06e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 331.71 E-value: 1.06e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPpKHLWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 81 QNHLQQEppTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 161 LIAILHIHTQTGTLHLTMIKLAHPTPHISwsnLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 321 LTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1904996158 401 FLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELISA 456
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITN 450
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
59-454 |
5.97e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 319.23 E-value: 5.97e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 59 DQISSPLLVLSCWLLPLMILASQNHLQQEppTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGN 138
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 139 QPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGtlHLTMIKLAHPTPHISWSNLMlCLAMMTAFMVKAPLYGLHLWLPK 218
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNF--SLSMFFNFPLNFSDFYLFLY-WIFLMLAFLVKLPMYFVHLWLPK 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 219 AHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVI 298
Cdd:MTH00205 211 AHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 299 SATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAE 378
Cdd:MTH00205 291 VGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASE 370
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1904996158 379 LTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00205 371 ILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
9.27e-71 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 226.04 E-value: 9.27e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 112 ALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 192 NLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 272 TSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLA-NTNYERSHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1904996158 351 VLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-454 |
6.01e-70 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 229.97 E-value: 6.01e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNHLQQEPPTrkqiFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKKRPKL----YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNqPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLcLAMMTAFMVKAPLYGLHLWL 216
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLF-LAFFIAFAVKVPMFPFHTWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTltgPM-PNYLLYPLLTLALWGA---LMTSSICLRQIDLKSLIAYSSVS 292
Cdd:COG1008 233 PDAHVEAPTAGSVLLAGVLLKMGGYGLLRFAL---PLfPEASAYFAPLLAALGVigiIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 293 HMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPT 372
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 373 INLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPE 452
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQ 469
|
..
gi 1904996158 453 LI 454
Cdd:COG1008 470 PL 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-454 |
7.13e-63 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 211.60 E-value: 7.13e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNHLQQEpptRKQIFISTMILAQpFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKKR---VKFYMAALLWLEG-GVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GnQPERLSAGTYLLLYTLISSLPLLIAIL----HIHTQTGTLHLTMIkLAHPTPHisWSNLMLCLAMMTAFMVKAPLYGL 212
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADL-LNLPLPP--GVQYWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTltgPM-PNYLLYPLLTLALWGALM---TSSICLRQIDLKSLIAY 288
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSL---PLfPDASHEFAPIIITLGVIAiiyGALVALAQTDIKKLIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 289 SSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMA 368
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 369 LPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLI 448
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLG 467
|
....*.
gi 1904996158 449 LKPELI 454
Cdd:PRK05846 468 VYPKPL 473
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-454 |
2.77e-62 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 209.80 E-value: 2.77e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNHLQQepptRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNqPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGtlHLTMIKLAHPTPHISWSNLMLCLAMMTAFMVKAPLYGLHLWL 216
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG--GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTltGPMPNYLLYPLLTLALWGALM---TSSICLRQIDLKSLIAYSSVSH 293
Cdd:TIGR01972 227 PDAHVEAPTAGSVILAGVLLKMGTYGFLRFNL--PLFPDASLYFAPVLAALGVIAiiyGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 294 MGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTI 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 374 NLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGP-TPTHITSMQNSNTREHLLMTLHMLPSLLLILKPE 452
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPN 464
|
..
gi 1904996158 453 LI 454
Cdd:TIGR01972 465 PL 466
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-410 |
7.93e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 200.67 E-value: 7.93e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 23 LWTNTTLHSLLIAAISLQWLTPTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILASQN---HLQQEpptrkqiFISTM 99
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 100 ILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLH---L 176
Cdd:MTH00204 119 LFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDyqiL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 177 TMIKLAHPTPHISWSNLMLCLAmmtafmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIR--------AST 248
Cdd:MTH00204 199 LNIKLPLSIQKWLLVGFFLSLA------VKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRfswplfpaASE 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 249 LTGPMpnyLLYPLLTLALWGALMTSsiclRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFC 328
Cdd:MTH00204 273 YFAPL---IVMLSVIAVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFI 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 329 LANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTL 408
Cdd:MTH00204 346 AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSL 425
|
..
gi 1904996158 409 FM 410
Cdd:MTH00204 426 YL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-454 |
9.32e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 187.82 E-value: 9.32e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 58 IDQISSPLLVLSCWLLPLMILASQNHLQQEPPTrkqiFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 138 NQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTL-HLTMIKLAHPTPHISWSNLMLclAMMTAFMVKAPLYGLHLWL 216
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHVVSEQTQKWIFL--GIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPM-PNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMG 295
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 296 LVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINL 375
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904996158 376 MAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLLMTLHMLPSLLLILKPELI 454
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFI 492
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
8.42e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 176.40 E-value: 8.42e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQN---HLQQEpptrkqiFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILI 133
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 134 TRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLH---LTMIKLAHPTPHISWSNLMLCLAmmtafmVKAPLY 210
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDyqaLCCLKIEKELQYFIFLGFFLSLA------IKIPKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIR--------ASTLTGPMpnyLLYPLLTLALWGALMTSsiclRQIDL 282
Cdd:MTH00217 224 PFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRfswpllpeASEYFSPL---IQTLSLLAIIYGSLTTC----RQVDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 283 KSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLA 362
Cdd:MTH00217 297 KRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1904996158 363 SLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFM 410
Cdd:MTH00217 377 VLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-412 |
9.91e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 155.45 E-value: 9.91e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 94 IFISTMILAqpFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHihtqtgt 173
Cdd:MTH00094 65 LILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 174 lHLTMIKLAHPTPHISWsNLMLCLAMMtaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRastLTGPM 253
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSW-EMFFILSLS--FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 254 PNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTN 333
Cdd:MTH00094 209 NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904996158 334 YERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLL 412
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
6.79e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 149.80 E-value: 6.79e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNhLQQEPptrkQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNQpERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWSnLMLCLAMMTAFMVKAPLYGLHLWL 216
Cdd:PRK12561 131 GGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLA-----LWGALMTssicLRQIDLKSLIAYSSV 291
Cdd:PRK12561 209 PDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgvvniIYGALNA----FAQDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 292 SHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPG 364
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1904996158 372 TINLMAELTIM---------TTLFNWSTLTIALTGAVtfLTAAYTLFML 411
Cdd:PRK12561 365 MSGFVSELTVFlgitssdvySSTFRTITILLAAVGLI--LTPIYLLSML 411
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-411 |
4.48e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 133.67 E-value: 4.48e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNHLQqepptRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNQpERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISwSNLMLCLAMMTAFMVKAPLYGLHLWL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTltGPMPNYLLYPLLTLALWGA---LMTSSICLRQIDLKSLIAYSSVSH 293
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFGV--GLFPEAWVYLAPWLATWAVvsvLYGASCAIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 294 MGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGL---QPVLPLMATWWLLASLTNMALP 370
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIP 386
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1904996158 371 PTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFML 411
Cdd:PRK06473 387 GMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-406 |
1.61e-33 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 130.65 E-value: 1.61e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 58 IDQISSPLLVLSCWLLPLMILASQNHLQQEPPTRkqIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGR--RFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 138 NQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLhlTMIKLAHPTPHISWSNLMLCLAMM-TAFMVKAPLYGLHLWL 216
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTL--NMADLAARLAELDPGLLLAAFALLlVGFGIKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPnyLLYPLLTLALWGALMT----SSICLRQIDLKSLIAYSSVS 292
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAD--PALFLGTLLLVLGLLTmlvgALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 293 HMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPT 372
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350
....*....|....*....|....*....|....*
gi 1904996158 373 INLMAELTIMTTLFNWSTLTIALTGAVT-FLTAAY 406
Cdd:COG0651 387 SGFVSKWLLLQAALEAGAWLLAAVLLLSsLLTLAY 421
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-428 |
6.38e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 124.82 E-value: 6.38e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQnhlqqePPTRK-QIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITR 135
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 136 WGNQpERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWsNLMLCLAMMTAFMVKAPLYGLHLW 215
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIIRAStlTGPMPNYLLYPLLTLALWG------ALMTSsicLRQIDLKSLIAYS 289
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMN--AGMLPDAHAQFAPLLIVLGvvniiyAALTS---FAQRNLKRKIAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 290 SVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMAL 369
Cdd:PRK02546 311 SISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLAL 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1904996158 370 PPTINLMAELTIMTTL-------FNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQN 428
Cdd:PRK02546 391 PGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEK 456
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
4.65e-26 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 101.83 E-value: 4.65e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 1 MLKIILPTLMLLPTAILSPPKHLWTNTTLHSLLIAAISLQWLT-PTYYHNKNSTLWTGIDQISSPLLVLSCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1904996158 80 SQNHLQQEPPTRKQIFISTMILAQPFLILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
4.98e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 110.42 E-value: 4.98e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQnhlqqePPTRK-QIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITR 135
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSM 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 136 WGNQpERLSAGTYLLLYTLISSLPLLIAILHI---HTQTGTLHL-TMIKLAHPTPhiswSNLMLCLAMMTAFMVKAPLYG 211
Cdd:CHL00011 155 WGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFeTLANQSYPVA----LEILFYIGFLIAYAVKLPIIP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRAStlTGPMPNYLLYPLLTLALWGALM---TSSICLRQIDLKSLIAY 288
Cdd:CHL00011 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHSIFSPWLVIVGAIQiiyAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 289 SSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMA 368
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1904996158 369 LPPTINLMAELT----IMTT---LFNWSTLTIALTGAVTFLTAAYTLFML 411
Cdd:CHL00011 388 LPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-411 |
5.63e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 110.19 E-value: 5.63e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 57 GIDQISSPLLVLSCWLLPLMILASQNHLQqepptRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNQpERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISwSNLMLCLAMMTAFMVKAPLYGLHLWL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRAStlTGPMPNYLLYPLLTLALWG---ALMTSSICLRQIDLKSLIAYSSVSH 293
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGtisVIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 294 MGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGL-QPV--LPLMATWWLLASLTNMALP 370
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIP 386
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1904996158 371 PTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFML 411
Cdd:PRK07363 387 GLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILL 427
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-406 |
1.00e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 94.56 E-value: 1.00e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 118 FYITFEATLIPTLILITRWGNqPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCL 197
Cdd:PRK08375 131 LFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGFVL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 198 ammTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALMT----S 273
Cdd:PRK08375 210 ---LALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSmlvgS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 274 SICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLP 353
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1904996158 354 LMATWWLLASLTNMALPPTINLMAELTIMTTLFN-WSTLTIALTGAVTFLTAAY 406
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-409 |
2.61e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 87.33 E-value: 2.61e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 58 IDQISSPLLVLSCWLLPLMILASQNHLQQEppTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 138 NQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLA----------HPTPHISWSNLMLCLAMMTAFMVKA 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKirglsfpltgGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 208 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIR-------ASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQI 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRflytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 281 DLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1904996158 361 LASLTNMALPPTINLMAELTIMTTLFNWStltIALTGAVTFLTAAYTLF 409
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLV 443
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-371 |
1.53e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.23 E-value: 1.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 59 DQISSPLLVLSCW-LLPLMILA-SQNHLQQEPPTRKQIFISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRw 136
Cdd:PRK12665 75 DRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLhlTMIKLAHPTPHISWSNLMLCLAM-MTAFMVKAPLYGLHLW 215
Cdd:PRK12665 154 GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL--NMADLAVRLDELPSGTRTALFAVlLVAFGIKAAVFPLSFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPmpnylLYPLLTLALWGALMTSSI----CLRQIDLKSLIAYSSV 291
Cdd:PRK12665 232 LPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLV 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 292 SHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK12665 307 SHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPP 386
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-381 |
4.98e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 67.26 E-value: 4.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 105 FLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLtmiklahp 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF-------- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 185 tphISWSN-----LMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLY 259
Cdd:MTH00062 155 ---SDWGSddsvsLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 260 PLLTLALWGALMTSSiclRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHS 339
Cdd:MTH00062 232 FLCCLFSVFFLITAC---SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGS 308
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1904996158 340 RILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTI 381
Cdd:MTH00062 309 RNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFL 350
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
117-408 |
1.26e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.99 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 117 LFYITFEATLIPTLILITRWGNQPERLSAGTylLLYTLISSLPLLIAILHIHTQTGTLHLTMIkLAHPtphiSWSN---L 193
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGI-LHSD----VWAEkpgL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 194 MLCLAMMTAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALwGALM 271
Cdd:PRK12650 207 TTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMI-TALM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 272 TSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPV 351
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRR 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1904996158 352 LPLMATWWLLASLTNMALPPTINLMAELTIMTTLF-----NWSTLTIALTGAVT-FLTAAYTL 408
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGAALGaVFTFAYSA 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
95-392 |
2.59e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 65.91 E-value: 2.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 95 FISTMILAQPFLILAFSALELSLFYitfEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTL 174
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 175 HLTMikLAHPTPHISWSNLMLCLAmmtaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMP 254
Cdd:PRK08667 193 ELSP--LGASAGILSLVFLLLFLG----FGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 255 NYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGA-TVMMIA----------HGLTS 323
Cdd:PRK08667 267 LWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLdTLALLAlggalfhslnHALFK 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904996158 324 SMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLT 392
Cdd:PRK08667 347 SLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVA 415
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-449 |
4.65e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 64.57 E-value: 4.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLT--GPMPNYLLYPLLTLALWGALMTSSICLRQIDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 284 SLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 364 LTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFMLLT-TQRGPTPTHITSmqnsnTREHLLMTLHML 442
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAgMVFGEPPEAVNR-----GDLGWLTTSPMF 461
|
....*..
gi 1904996158 443 PSLLLIL 449
Cdd:PRK06458 462 VHLVLVL 468
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
108-414 |
5.37e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.39 E-value: 5.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 108 LAFSALELSLFYITFEATLIPTLILITRWgNQPERLSAGtylLLYTLISSLPLLIAILHI-------HTQTGTLHLTMIK 180
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAA---LKYIFIASTAMIFAFIGLiflfsltRQALGTGTLNWTE 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 181 LAHPTPHISWSNLMLC-LAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTL---TGPMPNY 256
Cdd:PRK08676 193 LAAHASLLSPSVLGASfLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALlrqSGAAEQF 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 257 LLYPLLTLALWGALMTSSIcLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYER 336
Cdd:PRK08676 273 SNVLIGLGIFSIAVAAFSM-LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQ 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 337 SHS----RILLLTRgLQPVlplmATWWL-LASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAYTLFML 411
Cdd:PRK08676 352 YRSdrfdRIFDVFR-LQPV----AAWGViLGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
...
gi 1904996158 412 LTT 414
Cdd:PRK08676 427 LKA 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-406 |
7.26e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 63.82 E-value: 7.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 108 LAFSALELSLFYITFEATLIPTLILITrWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPh 187
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEA- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 188 iswsnlmlcLAMM-TAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRAStltgPMPNYLLYPLLTLAL 266
Cdd:PRK07234 187 ---------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA----LDVPGLDLIVRIFGV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 267 WGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIqthwsitgATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTR 346
Cdd:PRK07234 254 GTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQML 325
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 347 GLQPVLPLmatwwLLASLTNMALPPTINLMAELTIMTTLFNWstLTIALTGAvTFLTAAY 406
Cdd:PRK07234 326 GIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPW--QAIALNLA-AVGTAAS 377
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-421 |
2.11e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.53 E-value: 2.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 108 LAFSALELSLFyITFEATLIPTLILITrWGNQPERLSAGTYLLLYTLISSLPL-LIAILHIHTQTGTLHLTMIKLAHPTP 186
Cdd:PRK06589 132 IALSSDLFTMF-VCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQ 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 187 HIswsnlmLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYP-----L 261
Cdd:PRK06589 210 SI------ILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 262 LTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRI 341
Cdd:PRK06589 284 IFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQ 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 342 LLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFN----WSTLTIALTGAVTFLTAAYTLFMLLTTQRG 417
Cdd:PRK06589 364 VDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIASSILSALYLLKILSSIYK 443
|
....
gi 1904996158 418 PTPT 421
Cdd:PRK06589 444 PSLS 447
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
117-423 |
2.25e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.86 E-value: 2.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 117 LFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIkLAHPTPHISWSNLML- 195
Cdd:COG1009 135 LLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL-LAAAPTILSSPLLTLi 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 196 CLAMMTAFMVKAPLYGLHLWLPKAhVEAPIAGSmllaalllklggyGIIRASTL----------TGPMPNYLLYPLLTLA 265
Cdd:COG1009 214 LLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVS-------------ALLHAATMvkagvyllarLSPLFALSPVWLTVVA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 266 LWG---ALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQthwSITGATVMMIAHGLTSSMLFCLANTNYERSHSRIL 342
Cdd:COG1009 280 IIGaitALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDI 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 343 LLTRGLQPVLPLMATWWLLASLTNMALPPTIN-----LMAELTIMTTLFNWSTLTIALTGAvtFLTAAYTLFMLLTT--- 414
Cdd:COG1009 357 RKMGGLRKKMPITAITFLIGALSLAGIPPFAGffskeAILEAALEAGGLGPLLLAVALLGA--FLTAFYSFRLFFLVffg 434
|
330
....*....|
gi 1904996158 415 -QRGPTPTHI 423
Cdd:COG1009 435 kPRPKTPKHP 444
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
277-405 |
6.04e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 58.39 E-value: 6.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 277 LRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMA 356
Cdd:PRK12647 278 VRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITA 357
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1904996158 357 TWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAvTFLTAA 405
Cdd:PRK12647 358 AAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA-AVLGNA 405
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-418 |
6.45e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 58.23 E-value: 6.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 117 LFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTmiKLAHPTPHISWSNL--- 193
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNIT--EILGQADHIKNHGLfip 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 194 MLCLAMMTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRASTLTGpMPNYLLYPLLTLALWGALMT 272
Cdd:PRK12646 212 MIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFG 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 273 SSICLRQIDLKSLIAYSSVSHMGLVISATLI------QTHWSITGATVM--------MIAHGLTSSMLFCLANTNYERSH 338
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAG 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 339 SRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLT---IALTGAVTF-------LTAAYTL 408
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSqfsLISMIIIVFigviasiFTFTYAL 448
|
330
....*....|
gi 1904996158 409 FMLLTTQRGP 418
Cdd:PRK12646 449 YMVKEVFWGK 458
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
4.53e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.39 E-value: 4.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 110 FSALELSLFYITFEATLIPTLILITrWGNQPERLSAGTYLLLyTLISSLPLLIAILHIHTQTGTLHLTMI-KLAHPTPHI 188
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADIsQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 189 SWSnLMLCLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTL--------------TGPMP 254
Cdd:PRK08668 193 GFA-LIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVlpgtklfsefgtyrGVPLF 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1904996158 255 NYLLYPL-LTLALWGALMTssicLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLF 327
Cdd:PRK08668 272 NYILAWLgNISIIVGTLMA----ILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-371 |
1.21e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 54.00 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 155 ISSLPLLIAILHIHTQTGTLHltMIKLAHPTPHISWSNLMLCLAMMT-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAA 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLN--MAHIAQLAGTIDPTVAQVGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITVMFSA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 234 LLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALwgALMT----SSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSI 309
Cdd:PRK08377 247 FVVKAGLYAMARILYLMQNANGWSSVLKLVIIM--ATLTvffaELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGV 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1904996158 310 TGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK08377 325 DAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPL 386
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-449 |
1.52e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 53.93 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 95 FISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 175 HLT----MIKLAhPTPHISWsnlmLCLAMMTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRASTL 249
Cdd:MTH00020 193 DFSsvfnMVVSA-PSSDITL----ICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 250 TGPMPnYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIqTHWSItgATVMMIAHGLTSSMLFCL 329
Cdd:MTH00020 267 FEQAP-LALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSI--SLFHLMNHAFFKALLFLS 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 330 ANTN-YERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIA--LTGAVTFLTAAY 406
Cdd:MTH00020 343 AGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFY 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1904996158 407 TLFMLlttqrgptptHITSMQNSNTREHLLMTLH------MLPSLLLIL 449
Cdd:MTH00020 423 SIRLI----------YLTFLSNTNLKKAVFFHLHegdwnlLLPLGILAL 461
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-407 |
3.62e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.41 E-value: 3.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 118 FYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMI--KLAHPTPHISWSNLML 195
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavKMSENPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 196 claMMTAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIIRAS-TLTGPMPNYLLYPLLTLALWGALMT-- 272
Cdd:PRK08376 226 ---FIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLfSIYGPAINLATVGWVIIILGCLTMFvg 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 273 SSICLRQIDLKSLIAYSSVSHMGLVI------SATLIQTHWSITGATVM------MIAHGLTSSMLFCLANTNYERSHSR 340
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904996158 341 ILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTT--LFNWSTLTIALTGAVtFLTAAYT 407
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSV-LTLASFV 449
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-399 |
4.55e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.04 E-value: 4.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 89 PTRKQIFISTMILAQPFLILAFSALELSL-------FYITFEATLIPTLILITRWGNQPERLSAGTYLLLYTlISSLPLL 161
Cdd:PRK12662 99 PNRKEISVNKIPSFYSAFLLCLGGLLGILvsndvfnIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 162 IAILHIHTQTGTLHLT-MIKLAHPTPHISWSNLMLcLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:PRK12662 178 IGIGFLYAITGTLNMGdMFLIIQDLPTNRAIQIGV-LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMI 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 241 YGIIRA---------STLTGPMPNYLLYPLLTLAlwgaLMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITG 311
Cdd:PRK12662 257 YLIIRIvydvfkanfVFTTLPFNNVFMILAALAI----VFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 312 ATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFN---W 388
Cdd:PRK12662 333 AVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaW 412
|
330
....*....|.
gi 1904996158 389 STLTIALTGAV 399
Cdd:PRK12662 413 IGLVVLLVGSG 423
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-371 |
3.69e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.20 E-value: 3.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 106 LILAFSALELSLFyitFEATLIPTLILITRWGNqPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPT 185
Cdd:PRK06525 129 LVYSSTLLGLLLF---FEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 186 phiswSNLMLCLAMMTAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIIRASTLTGPMPNYLL 258
Cdd:PRK06525 205 -----LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIG 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 259 YPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLV---ISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYE 335
Cdd:PRK06525 273 YVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMffgLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSY 352
|
250 260 270
....*....|....*....|....*....|....*.
gi 1904996158 336 RSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK06525 353 SCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-371 |
5.70e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 48.73 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 94 IFISTMILaqpfLILAFSALelsLFYITFEATLIPTLILITRWGNQPERLSAGtylLLYTLISS---LPLLIAILHIHTQ 170
Cdd:PRK06521 121 LFLASMVL----VLLADDAF---SFLVAWETMSLSSWFLVIANHREAEIRRAG---FLYLLMAHagaLAILLAFGLLARE 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 171 TGTLHLTMIKLAHPTPhiSWSNLMLCLAMMtAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRAS-TL 249
Cdd:PRK06521 191 SGSYDFAAMRAAHLSP--FWASLVFLLALF-GFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVfDL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 250 TGPmpnyllypllTLALWGALM-----TSSI-----CLRQIDLKSLIAYSSVSHMGLV---ISATLI--------QTHWS 308
Cdd:PRK06521 268 LGA----------PGWWWGVLVlalgaISAVlgvlyALAEHDLKRLLAYSTIENIGIIfvgLGLAMVfiaygmplLAALA 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1904996158 309 ITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK06521 338 LTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-371 |
8.95e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.02 E-value: 8.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 119 YITFEATLIPTLILITRWGNQPERLSAGTYLLLyTLISSLPLLIAILHIHTQTGTLHLTMI--KLAHPTPHISWSNLMLC 196
Cdd:PRK07691 134 FVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsvKIAELSAGQTGLITVVA 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 197 LAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLtgpMPNYLLYPLLTLALWGALMTSSI- 275
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTL---FFSHDTSFTHYLILILALLTIIFg 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 276 ---CLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVL 352
Cdd:PRK07691 290 vigAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRY 369
|
250
....*....|....*....
gi 1904996158 353 PLMATWWLLASLTNMALPP 371
Cdd:PRK07691 370 PVLGWMFFIAALSLAGIPP 388
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-456 |
1.14e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 47.64 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 119 YITFEATLIPTLILITrWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHISWSNLMLCLA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 199 MMTAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSI-CL 277
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 278 RQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMAT 357
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 358 WWLLASLTNMALPPTINLMAELTIMT-TLFNWSTLTIALTGAVTFLTAAYTLFMLLTTQRGPTPTHITSMQNSNTREHLL 436
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLP 451
|
330 340
....*....|....*....|
gi 1904996158 437 MTLHMLPSLLLILKPELISA 456
Cdd:PRK12663 452 LSILAVVVIAMGIAAEPLLN 471
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
2.89e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.38 E-value: 2.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 137 GNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHltMIKLAHPTPHISWSNLML----CLAMMTAFMVKAPLYGL 212
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLN--MADLAQRIAQLPAADRALleagAALLLVVFLIKAAMWPL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 213 HLWLPKAHVEA--PIAGSMllaALLLKLGGYGIIRASTLT-GPMPNYLLYPLLTLALWGALMTSSI----CLRQIDLKSL 285
Cdd:PRK12666 230 NFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRL 306
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1904996158 286 IAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLA 330
Cdd:PRK12666 307 AAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
277-410 |
8.18e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.30 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 277 LRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMA 356
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1904996158 357 TWWLLASLTNMALPPTINLMAELTIMTTLFNWSTL----TIALTGAV--TFLTAAYTL-FM 410
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlgSILTVAYSLrFL 426
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-406 |
1.34e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.17 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 95 FISTMILAQPFLILAFSALELSLFYITFEATLIPTLILITRWGNQPERLSAG-TYLLLYTLISSLpLLIAILHIHTQTGT 173
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlKYFILGAFSSGL-LLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 174 LHLTMIKLAHPTPHISWSNLMLCLA-MMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRAS-TLTG 251
Cdd:TIGR01770 183 LNFEDLLLFLSNGMLNISLLLLGIVlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFlYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 252 PMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTS----SMLF 327
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904996158 328 CLANTNYERSHSriLLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAY 406
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-371 |
2.97e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 43.28 E-value: 2.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 108 LAFSALELSLFyITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLT-------MIK 180
Cdd:PRK12649 127 MVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAtilqdseLIE 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 181 LAHPTPhISWSNLMLCLAMMTAFMVKAPLYglhLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRASTLTGPMPNYLLY 259
Cdd:PRK12649 206 NIKGHP-LFLITLILIFIGAAAKSAQGPFY---IWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARIHPIFSGTEAWFIL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 260 PLLTLALwGALMTSSICLRQIDLKSLIAYSSVSHMGLVISATLIQTH----WSITGATVMMIAHGLTSSMLFCLANTNYE 335
Cdd:PRK12649 281 VSGTGMI-TMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAH 359
|
250 260 270
....*....|....*....|....*....|....*.
gi 1904996158 336 RSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPP 371
Cdd:PRK12649 360 EAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
112-404 |
1.67e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 40.66 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 112 ALELSLF--YITFEATLIPTLILITRWGNQPERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPHIS 189
Cdd:PRK07390 137 ALSDSLFfsYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLD 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 190 --WSNLmLCLAMMTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIIRASTLTGPMPnYLLYPLLTLALW 267
Cdd:PRK07390 217 plTATL-LGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLALSP-VALTVLIVIGTV 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 268 GALMTSSICLRQIDLKSLIAYSSVSHMGLVISAtlIQTHWSITgATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRG 347
Cdd:PRK07390 294 TAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA--VGLQQPDI-ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGG 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1904996158 348 LQPVLPLMATWWLLASLTNMALPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTA 404
Cdd:PRK07390 371 LWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTA 427
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
274-371 |
2.99e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.01 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 274 SICLRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLP 353
Cdd:PRK06277 282 VMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMP 361
|
90
....*....|....*...
gi 1904996158 354 LMATWWLLASLTNMALPP 371
Cdd:PRK06277 362 VVAFMVLCAKLAISGVPP 379
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
3.03e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.81 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 155 ISSLPLLIAILHIHTQTGTLHLTMIKL---AHPTPHISWsnlmlcLAMMTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLL 231
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMrmqQLPLGSDIW------LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALF 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 232 AALLLKLGGYGIIRASTLTGPMPNYLLYPLLTLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVI------------- 298
Cdd:PRK08042 219 STVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILlglgagvtgiale 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 299 SATLIQThwSITGATVMMIAHGLTSSMLFCLANTNYERSHSRILLLTRGLQPVLPLMATWWLLASLTNMALPPTINLMAE 378
Cdd:PRK08042 299 QPALIAL--GLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 376
|
250
....*....|..
gi 1904996158 379 LTIMTTLFNWST 390
Cdd:PRK08042 377 WVIYQSFFKLSN 388
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
277-406 |
4.21e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 39.33 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 277 LRQIDLKSLIAYSSVSHMGLVISATLIQTHWSITGATVMMIAHGLTS----SMLFCLANTNYERSHSRILlltRGL---Q 349
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNlgafAVILLLSRKGGEAEEIEDL---AGLarrS 364
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1904996158 350 PVLPLMatwwLLASLTNMA-LPPTINLMAELTIMTTLFNWSTLTIALTGAVTFLTAAY 406
Cdd:COG1007 365 PLLALA----MTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
140-327 |
7.90e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 38.72 E-value: 7.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 140 PERLSAGTYLLLYTLISSLPLLIAILHIHTQTGTLHLTMIKLAHPTPhiSWsnlmlcLAMmTAFMVKAPLYGLHLWLPKA 219
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTA--AW------LIL-IGFGVNAAFPPLHAWLPDA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904996158 220 HVEAPIAGSMLLAALLLKLGGYGIIRAstltgpMPNYLLYPLLtlalwGALMT---SSICLRQIDLKSLIAYSSVSHMGL 296
Cdd:PRK12668 210 YPEATVTGSVFLSAFTTKTAVYALARA------FPGTELLIYI-----GAAMAvygVFFALLENDLRRLLSYHIVSQVGY 278
|
170 180 190
....*....|....*....|....*....|.
gi 1904996158 297 VISATLIQTHWSITGATVMMIAHGLTSSMLF 327
Cdd:PRK12668 279 MVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| |
