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Conserved domains on  [gi|1914218768|gb|QOI17418|]
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cytochrome b, partial (mitochondrion) [Pseudoromicia kityoi]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-344 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 711.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00100   34 GSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00100  114 NIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALA 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00100  194 MVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWY 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00100  274 FLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQL 353

                         330       340
                  ....*....|....*....|....
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLL 344
Cdd:MTH00100  354 ASILYFLIILILMPIASLIENNLL 377
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-344 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 711.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00100   34 GSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00100  114 NIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALA 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00100  194 MVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWY 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00100  274 FLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQL 353

                         330       340
                  ....*....|....*....|....
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLL 344
Cdd:MTH00100  354 ASILYFLIILILMPIASLIENNLL 377
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-340 1.17e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 378.36  E-value: 1.17e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYmfKE-- 78
Cdd:COG1290    43 GELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKpr 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 --TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FLLPFI 155
Cdd:COG1290   121 elNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPAL 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 156 ISALVMVHLLFLHETGSNNPTGI----PSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDmlGDPDNYSPANPLNT 231
Cdd:COG1290   201 LLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLAT 278

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 232 PPHIKPEWYFLFAYAILRSIP--NKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQP 309
Cdd:COG1290   279 PAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANP 358

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1914218768 310 VehPYIIIGQLASILYFLLIIVIMPLVSLME 340
Cdd:COG1290   359 P--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-173 4.19e-82

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 248.05  E-value: 4.19e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYM--FKE 78
Cdd:cd00284    26 GSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpREL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISA 158
Cdd:cd00284   106 TWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAV 185

                         170
                  ....*....|....*
gi 1914218768 159 LVMVHLLFLHETGSN 173
Cdd:cd00284   186 IVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-171 1.62e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 233.43  E-value: 1.62e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYG--SYMFKE 78
Cdd:pfam00033  17 GSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPREL 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISA 158
Cdd:pfam00033  97 TWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAI 176

                         170
                  ....*....|...
gi 1914218768 159 LVMVHLLFLHETG 171
Cdd:pfam00033 177 LMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 196-306 9.51e-11

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 59.43  E-value: 9.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 196 ILGLFMMIMvllSLVLFSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVIPFLH 275
Cdd:TIGR01156  44 ILGTIACVV---GLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914218768 276 TSKQRSMTF-RPLSQCMFwlLAADLFTLtWIG 306
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-344 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 711.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00100   34 GSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00100  114 NIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALA 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00100  194 MVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWY 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00100  274 FLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQL 353

                         330       340
                  ....*....|....*....|....
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLL 344
Cdd:MTH00100  354 ASILYFLIILILMPIASLIENNLL 377
CYTB MTH00119
cytochrome b; Provisional
 1-345 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 647.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00119   35 GSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00119  115 NTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLT 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00119  195 LIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00119  275 FLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQL 354

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00119  355 ASILYFTILLILFPLLGALENKMLN 379
CYTB MTH00131
cytochrome b; Provisional
 1-345 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 627.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00131   34 GSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00131  114 NIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAAT 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00131  194 ILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWY 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00131  274 FLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQV 353

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00131  354 ASVLYFSLFLVLMPLAGWLENKALE 378
CYTB MTH00074
cytochrome b; Provisional
 1-345 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 616.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00074   35 GSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00074  115 NIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGAS 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00074  195 IIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00074  275 FLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQA 354

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00074  355 ASILYFLLFIIIIPLTGWLENKLLK 379
CYTB MTH00191
cytochrome b; Provisional
 1-335 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 589.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00191   31 GSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETW 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00191  111 NVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00191  191 LIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWY 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00191  271 FLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQI 350

                         330
                  ....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPL 335
Cdd:MTH00191  351 SSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 1-333 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 582.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00156   24 GSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTW 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00156  104 MSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMV 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00156  184 MIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWY 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00156  264 FLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQI 343

                         330
                  ....*....|...
gi 1914218768 321 ASILYFLLIIVIM 333
Cdd:MTH00156  344 LTILYFLYFIINP 356
CYTB MTH00034
cytochrome b; Validated
 1-345 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 563.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00034   34 GSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00034  114 NIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALS 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00034  194 IIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWY 273

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00034  274 FLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQV 353

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00034  354 ASVLYFSLFLFFFPLISYLENKLIF 378
CYTB MTH00145
cytochrome b; Provisional
 1-344 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 554.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00145   35 GSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00145  115 NIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLS 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00145  195 VLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00145  275 FLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQV 354

                         330       340
                  ....*....|....*....|....
gi 1914218768 321 ASILYFLLIIVImPLVSLMENHLL 344
Cdd:MTH00145  355 FTVLYFLFFLIL-PLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 1-344 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 527.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00016   35 GSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00016  115 NIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALS 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00016  195 MIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00016  275 FLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQI 354

                         330       340
                  ....*....|....*....|....
gi 1914218768 321 ASILYFlLIIVIMPLVSLMENHLL 344
Cdd:MTH00016  355 FTVFYF-FYFMINPLLMKLWDKLL 377
CYTB MTH00022
cytochrome b; Validated
 1-345 2.89e-173

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 486.13  E-value: 2.89e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00022   33 GSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVW 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00022  113 NVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLV 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00022  193 IVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWY 272

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00022  273 FLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQL 352

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00022  353 LSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 1-345 9.23e-173

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 484.98  E-value: 9.23e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00053   35 GSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00053  115 NVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLA 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00053  195 LVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00053  275 FLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQI 354

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIVIMPLVSLMENHLLN 345
Cdd:MTH00053  355 ASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 1-345 1.81e-160

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 453.61  E-value: 1.81e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00224   35 GSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETW 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00224  115 NIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGAT 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00224  195 ILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWY 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00224  275 FLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQV 354

                         330       340
                  ....*....|....*....|....*
gi 1914218768 321 ASILYFLLIIvIMPLVSLMENHLLN 345
Cdd:MTH00224  355 FTILYFSYFI-ISPAISKLWDDLLN 378
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-340 1.17e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 378.36  E-value: 1.17e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYmfKE-- 78
Cdd:COG1290    43 GELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKpr 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 --TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FLLPFI 155
Cdd:COG1290   121 elNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPAL 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 156 ISALVMVHLLFLHETGSNNPTGI----PSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDmlGDPDNYSPANPLNT 231
Cdd:COG1290   201 LLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLAT 278

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 232 PPHIKPEWYFLFAYAILRSIP--NKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQP 309
Cdd:COG1290   279 PAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANP 358

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1914218768 310 VehPYIIIGQLASILYFLLIIVIMPLVSLME 340
Cdd:COG1290   359 P--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00033
cytochrome b; Provisional
 1-341 1.56e-128

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 372.73  E-value: 1.56e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00033   31 GSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTW 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00033  111 IVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLV 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMM--IMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPE 238
Cdd:MTH00033  191 LAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILfgVFVIIGIEPRIETLLQDPENFIQANPLVTPVHIQPE 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 239 WYFLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPV-EHPYIII 317
Cdd:MTH00033  271 WYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLI 350

                         330       340
                  ....*....|....*....|....
gi 1914218768 318 GQLASILYFLLIIVIMPLVSLMEN 341
Cdd:MTH00033  351 GRIATIFYFGYFLVLVPLLGYLSN 374
CYTB MTH00086
cytochrome b; Provisional
 1-333 2.55e-114

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 335.76  E-value: 2.55e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00086   23 GSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVW 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00086  103 ISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLV 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFmMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWY 240
Cdd:MTH00086  183 LFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWY 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 241 FLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSkqrSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQL 320
Cdd:MTH00086  262 FLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQI 338

                         330
                  ....*....|...
gi 1914218768 321 ASILYFLLIIVIM 333
Cdd:MTH00086  339 FSFIYFFLILLML 351
CYTB MTH00046
cytochrome b; Validated
 1-331 1.60e-91

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 277.63  E-value: 1.60e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKETW 80
Cdd:MTH00046   25 GFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVW 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  81 NMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALV 160
Cdd:MTH00046  105 NVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLM 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 161 MVHLLFLHETGSNNPTGIPSNM-DMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEW 239
Cdd:MTH00046  185 VVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEW 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 240 YFLFAYAILRSIPNKLGGvLALVLSILILIVIPflhtSKQRSMTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQ 319
Cdd:MTH00046  265 YFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQ 339

                         330
                  ....*....|..
gi 1914218768 320 LASILYFLLIIV 331
Cdd:MTH00046  340 LFSVLMVLLLFI 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-173 4.19e-82

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 248.05  E-value: 4.19e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYM--FKE 78
Cdd:cd00284    26 GSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpREL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISA 158
Cdd:cd00284   106 TWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAV 185

                         170
                  ....*....|....*
gi 1914218768 159 LVMVHLLFLHETGSN 173
Cdd:cd00284   186 IVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-171 1.62e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 233.43  E-value: 1.62e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768   1 GSLLGIWLGLQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYG--SYMFKE 78
Cdd:pfam00033  17 GSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPREL 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  79 TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISA 158
Cdd:pfam00033  97 TWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAI 176

                         170
                  ....*....|...
gi 1914218768 159 LVMVHLLFLHETG 171
Cdd:pfam00033 177 LMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 174-321 1.80e-54

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 175.14  E-value: 1.80e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 174 NPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPN 253
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1914218768 254 KLGGVLALVLSILILIVIPFLHTSKQRSmTFRPLSQCMFWLLAADLFTLTWIGGQPVEHPYIIIGQLA 321
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
225-325 6.91e-49

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 159.18  E-value: 6.91e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 225 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTFRPLSQCMFWLLAADLFTLTW 304
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1914218768 305 IGGQPVEHPYIIIGQLASILY 325
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
55-220 6.70e-46

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 153.94  E-value: 6.70e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  55 SMFFICLYLHVGRGLYYGSYMFKE--TWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIW 132
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 133 GGFSVDKATLTRFFAFHF-LLPFIISALVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFMMIMVLLSLVL 211
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1914218768 212 FSPDMLGDP 220
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 10-175 4.30e-36

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 130.22  E-value: 4.30e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  10 LQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSYMFKE--TWNMGVILL 87
Cdd:PRK03735   54 IQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIF 133

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  88 FAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FLLPFIISALVMVHLLF 166
Cdd:PRK03735  134 FVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLM 213


                  ....*....
gi 1914218768 167 LHETGSNNP 175
Cdd:PRK03735  214 IRKQGISGP 222
petB CHL00070
cytochrome b6
 10-175 1.33e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 115.59  E-value: 1.33e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  10 LQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWMLRYLHANGASMFFICLYLHVGRGLYYGSymFKE----TWNMGVI 85
Cdd:CHL00070   46 VQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG--FKKprelTWVTGVV 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768  86 LLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FLLPFIISALVMVHL 164
Cdd:CHL00070  124 LAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHF 203

                         170
                  ....*....|.
gi 1914218768 165 LFLHETGSNNP 175
Cdd:CHL00070  204 LMIRKQGISGP 214
petD CHL00058
cytochrome b6/f complex subunit IV
 196-292 4.81e-13

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 66.18  E-value: 4.81e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 196 ILGLFMmimVLLSLVLFSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVIPFL- 274
Cdd:CHL00058   44 ILGTIA---CNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115

                          90
                  ....*....|....*...
gi 1914218768 275 HTSKQRSMTFRPLSQCMF 292
Cdd:CHL00058  116 NVNKFQNPFRRPVATTVF 133
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 175-306 7.59e-13

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 65.59  E-value: 7.59e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 175 PTGIPSNMDMIPFHPyytiKDILGLFMM-----IMVLLSLVLFSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILR 249
Cdd:COG5679    20 EKGMGHNYYGEPAWP----NDLLYIFPVvilgtIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILR 90

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1914218768 250 SIPNKLGGVLALVLSILILIVIPFLHTSKQRSMTF-RPLSQCMFwlLAADLFTLtWIG 306
Cdd:COG5679    91 VVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF--LFGTLVTL-WLG 145
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 196-306 9.51e-11

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 59.43  E-value: 9.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914218768 196 ILGLFMMIMvllSLVLFSPDMLGDPdnyspANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVIPFLH 275
Cdd:TIGR01156  44 ILGTIACVV---GLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914218768 276 TSKQRSMTF-RPLSQCMFwlLAADLFTLtWIG 306
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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