|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 757.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00100 18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00100 98 VGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTR 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00100 178 FFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYT 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00100 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTW 337
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00100 338 IGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-356 |
3.77e-133 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 385.68 E-value: 3.77e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:COG1290 107 MFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 159 TRFFALH-FLLPFIIAALVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDll 233
Cdd:COG1290 187 NRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI-- 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 234 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFL 311
Cdd:COG1290 265 NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAF 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1914847927 312 VADLATLTWIGGQPVehPFIIIGQMASIVYFLIILVLLPLASIAE 356
Cdd:COG1290 345 IVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-189 |
2.45e-92 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 274.63 E-value: 2.45e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:cd00284 10 LIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLH 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSY--TFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:cd00284 90 IFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATL 169
|
170 180 190
....*....|....*....|....*....|.
gi 1914847927 159 TRFFALHFLLPFIIAALVMVHLLFLHETGSN 189
Cdd:cd00284 170 TRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-187 |
3.11e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 256.15 E-value: 3.11e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYG--SYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1914847927 159 TRFFALHFLLPFIIAALVMVHLLFLHETG 187
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
212-322 |
3.88e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.19 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:TIGR01156 44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 1914847927 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTV--FLFGTVVAL-WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 757.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00100 18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00100 98 VGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTR 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00100 178 FFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYT 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00100 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTW 337
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00100 338 IGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 684.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00119 19 LIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00119 99 IGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00119 179 FFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00119 259 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00119 339 IGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 670.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00131 18 LVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00131 98 IGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00131 178 FFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFT 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00131 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTW 337
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00131 338 IGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 651.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00074 19 FIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00074 99 IGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00074 179 FFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00074 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00074 339 IGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-351 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 622.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00191 15 LIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00191 95 IGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00191 175 FFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFI 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00191 255 PANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTW 334
|
330 340 350
....*....|....*....|....*....|.
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPL 351
Cdd:MTH00191 335 LGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-348 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 617.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00156 9 IDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00156 89 GRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00156 169 FTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00156 249 ANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWI 328
|
330 340
....*....|....*....|....*..
gi 1914847927 322 GGQPVEHPFIIIGQMASIVYFLIILVL 348
Cdd:MTH00156 329 GARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 589.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00145 19 LYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00145 99 IGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00145 179 FFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFI 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00145 259 PANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVlLPLASIAENRLL 360
Cdd:MTH00145 339 IGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-360 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 585.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00034 18 LIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00034 98 IGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTR 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00034 178 FFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFI 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00034 258 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTW 337
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLL 360
Cdd:MTH00034 338 IGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-361 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 560.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00016 19 LVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00016 99 IGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00016 179 FFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFI 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00016 259 PANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFlIILVLLPLASIAENRLLK 361
Cdd:MTH00016 339 IGGRPVEPPYEFLGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 521.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00053 19 FIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00053 99 IGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00053 179 FYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFK 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00053 259 QANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLK 361
Cdd:MTH00053 339 IGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
2-361 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 515.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00022 18 VDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00022 98 GRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00022 178 FSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQ 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00022 258 ANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWI 337
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1914847927 322 GGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLK 361
Cdd:MTH00022 338 GSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-361 |
9.27e-174 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 488.28 E-value: 9.27e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00224 19 LIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00224 99 VGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00224 179 FFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00224 259 MANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTW 338
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFlIILVLLPLASIAENRLLK 361
Cdd:MTH00224 339 IGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-357 |
8.90e-139 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 399.70 E-value: 8.90e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILM--IMALLSLVLFSPDLLGDPDNY 239
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILfgVFVIIGIEPRIETLLQDPENF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 240 TPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLT 319
Cdd:MTH00033 256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335
|
330 340 350
....*....|....*....|....*....|....*....
gi 1914847927 320 WIGGQPV-EHPFIIIGQMASIVYFLIILVLLPLASIAEN 357
Cdd:MTH00033 336 WIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-356 |
3.77e-133 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 385.68 E-value: 3.77e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:COG1290 107 MFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 159 TRFFALH-FLLPFIIAALVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDll 233
Cdd:COG1290 187 NRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI-- 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 234 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFL 311
Cdd:COG1290 265 NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAF 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1914847927 312 VADLATLTWIGGQPVehPFIIIGQMASIVYFLIILVLLPLASIAE 356
Cdd:COG1290 345 IVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
2-349 |
3.71e-124 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 361.18 E-value: 3.71e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00086 8 VTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00086 88 FKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLIlMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00086 168 FVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPEMFIE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSkqrSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00086 247 ADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWL 323
|
330 340
....*....|....*....|....*...
gi 1914847927 322 GGQPVEHPFIIIGQMASIVYFLIILVLL 349
Cdd:MTH00086 324 GQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-347 |
1.52e-94 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 285.72 E-value: 1.52e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00046 10 IDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHM 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00046 90 GRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSD-ADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00046 170 FSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVaLVLSILVLAVIPllhtSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00046 250 EADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLSY 324
|
330 340
....*....|....*....|....*..
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVYFLIILV 347
Cdd:MTH00046 325 LGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-189 |
2.45e-92 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 274.63 E-value: 2.45e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:cd00284 10 LIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLH 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYGSY--TFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:cd00284 90 IFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATL 169
|
170 180 190
....*....|....*....|....*....|.
gi 1914847927 159 TRFFALHFLLPFIIAALVMVHLLFLHETGSN 189
Cdd:cd00284 170 TRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-187 |
3.11e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 256.15 E-value: 3.11e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 81 VGRGIYYG--SYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1914847927 159 TRFFALHFLLPFIIAALVMVHLLFLHETG 187
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
190-337 |
2.48e-54 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 175.53 E-value: 2.48e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 190 NPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 269
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1914847927 270 KLGGVVALVLSILVLAVIPLLHTSKQRSmTFRPLSQCLFWFLVADLATLTWIGGQPVEHPFIIIGQMA 337
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
241-341 |
1.39e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 153.79 E-value: 1.39e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1914847927 321 IGGQPVEHPFIIIGQMASIVY 341
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
71-236 |
6.48e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 152.01 E-value: 6.48e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 71 SMFFICLFLHVGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVW 148
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 149 GGFSVDKATLTRFFALHF-LLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVL 227
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1914847927 228 FSPDLLGDP 236
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
16-191 |
3.69e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 141.39 E-value: 3.69e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 16 FGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFTE- 94
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 95 -TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRFFALH-FLLPFII 172
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 1914847927 173 AALVMVHLLFLHETGSNNP 191
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
7-191 |
5.48e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 122.14 E-value: 5.48e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 7 PSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIY 86
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 87 YGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRFFAL 164
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 1914847927 165 H-FLLPFIIAALVMVHLLFLHETGSNNP 191
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
212-322 |
9.57e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 62.50 E-value: 9.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:COG5679 45 ILGTIALCIGLAVL---DPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIE 116
|
90 100 110
....*....|....*....|....*....|..
gi 1914847927 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:COG5679 117 NVNKFQNPFrRPVATAV--FLFGTLVTL-WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
212-310 |
9.15e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 56.93 E-value: 9.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLL- 290
Cdd:CHL00058 44 ILGTIACNVGLAVL---EPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115
|
90 100
....*....|....*....|
gi 1914847927 291 HTSKQRSMTFRPLSQCLFWF 310
Cdd:CHL00058 116 NVNKFQNPFRRPVATTVFLI 135
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
212-322 |
3.88e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.19 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847927 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:TIGR01156 44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 1914847927 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTV--FLFGTVVAL-WLG 144
|
|
|