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Conserved domains on  [gi|1914847933|gb|QOI90715|]
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cytochrome b, partial (mitochondrion) [Triaenops persicus]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 757.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00100   18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00100   98 VGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTR 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00100  178 FFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYT 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00100  258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTW 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00100  338 IGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 757.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00100   18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00100   98 VGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTR 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00100  178 FFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYT 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00100  258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTW 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00100  338 IGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-356 3.77e-133

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 385.68  E-value: 3.77e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:COG1290    27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:COG1290   107 MFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATL 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 159 TRFFALH-FLLPFIIAALVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDll 233
Cdd:COG1290   187 NRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI-- 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 234 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFL 311
Cdd:COG1290   265 NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAF 344

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1914847933 312 VADLATLTWIGGQPVehPFIIIGQMASIVYFLIILVLLPLASIAE 356
Cdd:COG1290   345 IVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-189 2.45e-92

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 274.63  E-value: 2.45e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:cd00284    10 LIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLH 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSY--TFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:cd00284    90 IFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATL 169

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1914847933 159 TRFFALHFLLPFIIAALVMVHLLFLHETGSN 189
Cdd:cd00284   170 TRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-187 3.11e-85

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 256.15  E-value: 3.11e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYG--SYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1914847933 159 TRFFALHFLLPFIIAALVMVHLLFLHETG 187
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 212-322 3.88e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.19  E-value: 3.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914847933 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTV--FLFGTVVAL-WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 757.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00100   18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00100   98 VGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTR 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00100  178 FFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYT 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00100  258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTW 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00100  338 IGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 684.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00119   19 LIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00119   99 IGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00119  179 FFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFT 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00119  259 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00119  339 IGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 670.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00131   18 LVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLH 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00131   98 IGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTR 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00131  178 FFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFT 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00131  258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTW 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00131  338 IGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
CYTB MTH00074
cytochrome b; Provisional
 1-362 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 651.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00074   19 FIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00074   99 IGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00074  179 FFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFT 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00074  259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLKW 362
Cdd:MTH00074  339 IGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 1-351 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 622.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00191   15 LIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLH 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00191   95 IGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTR 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00191  175 FFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFI 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00191  255 PANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTW 334

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPL 351
Cdd:MTH00191  335 LGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 2-348 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 617.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00156    9 IDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHI 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00156   89 GRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00156  169 FTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIP 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00156  249 ANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWI 328

                         330       340
                  ....*....|....*....|....*..
gi 1914847933 322 GGQPVEHPFIIIGQMASIVYFLIILVL 348
Cdd:MTH00156  329 GARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-360 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 589.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00145   19 LYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00145   99 IGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00145  179 FFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFI 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00145  259 PANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVlLPLASIAENRLL 360
Cdd:MTH00145  339 IGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
CYTB MTH00034
cytochrome b; Validated
 1-360 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 585.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00034   18 LIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFH 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00034   98 IGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTR 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00034  178 FFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFI 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00034  258 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTW 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLL 360
Cdd:MTH00034  338 IGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00016
cytochrome b; Validated
 1-361 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 560.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00016   19 LVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00016   99 IGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00016  179 FFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFI 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00016  259 PANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFlIILVLLPLASIAENRLLK 361
Cdd:MTH00016  339 IGGRPVEPPYEFLGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
CYTB MTH00053
cytochrome b; Provisional
 1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 521.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00053   19 FIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00053   99 IGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00053  179 FYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFK 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00053  259 QANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLK 361
Cdd:MTH00053  339 IGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00022
cytochrome b; Validated
 2-361 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 515.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00022   18 VDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHI 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00022   98 GRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRF 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00022  178 FSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQ 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00022  258 ANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWI 337

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1914847933 322 GGQPVEHPFIIIGQMASIVYFLIILVLLPLASIAENRLLK 361
Cdd:MTH00022  338 GSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00224
cytochrome b; Provisional
 1-361 9.27e-174

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 488.28  E-value: 9.27e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:MTH00224   19 LIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLH 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTR 160
Cdd:MTH00224   99 VGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNR 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 161 FFALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00224  179 FFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFL 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00224  259 MANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTW 338

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFlIILVLLPLASIAENRLLK 361
Cdd:MTH00224  339 IGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 2-357 8.90e-139

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 399.70  E-value: 8.90e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00033   16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00033   96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILM--IMALLSLVLFSPDLLGDPDNY 239
Cdd:MTH00033  176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILfgVFVIIGIEPRIETLLQDPENF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 240 TPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLT 319
Cdd:MTH00033  256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335

                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1914847933 320 WIGGQPV-EHPFIIIGQMASIVYFLIILVLLPLASIAEN 357
Cdd:MTH00033  336 WIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-356 3.77e-133

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 385.68  E-value: 3.77e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:COG1290    27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:COG1290   107 MFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATL 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 159 TRFFALH-FLLPFIIAALVMVHLLFLHETGSNNPTGI----PSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDll 233
Cdd:COG1290   187 NRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI-- 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 234 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFL 311
Cdd:COG1290   265 NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAF 344

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1914847933 312 VADLATLTWIGGQPVehPFIIIGQMASIVYFLIILVLLPLASIAE 356
Cdd:COG1290   345 IVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 2-349 3.71e-124

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 361.18  E-value: 3.71e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00086    8 VTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHI 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00086   88 FKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLIlMIMALLSLVLFSPDLLGDPDNYTP 241
Cdd:MTH00086  168 FVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPEMFIE 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 242 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSkqrSMTFRPLSQCLFWFLVADLATLTWI 321
Cdd:MTH00086  247 ADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWL 323

                         330       340
                  ....*....|....*....|....*...
gi 1914847933 322 GGQPVEHPFIIIGQMASIVYFLIILVLL 349
Cdd:MTH00086  324 GQCLVEYPFLFLSQIFSFIYFFLILLML 351
CYTB MTH00046
cytochrome b; Validated
 2-347 1.52e-94

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 285.72  E-value: 1.52e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   2 VDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHV 81
Cdd:MTH00046   10 IDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHM 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  82 GRGIYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRF 161
Cdd:MTH00046   90 GRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRV 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 162 FALHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSD-ADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYT 240
Cdd:MTH00046  170 FSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYL 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVaLVLSILVLAVIPllhtSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:MTH00046  250 EADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLSY 324

                         330       340
                  ....*....|....*....|....*..
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVYFLIILV 347
Cdd:MTH00046  325 LGGCHPEYPYLLISQLFSVLMVLLLFI 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-189 2.45e-92

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 274.63  E-value: 2.45e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:cd00284    10 LIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLH 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYGSY--TFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:cd00284    90 IFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATL 169

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1914847933 159 TRFFALHFLLPFIIAALVMVHLLFLHETGSN 189
Cdd:cd00284   170 TRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-187 3.11e-85

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 256.15  E-value: 3.11e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   1 FVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLH 80
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  81 VGRGIYYG--SYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATL 158
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1914847933 159 TRFFALHFLLPFIIAALVMVHLLFLHETG 187
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 190-337 2.48e-54

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 175.53  E-value: 2.48e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 190 NPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 269
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1914847933 270 KLGGVVALVLSILVLAVIPLLHTSKQRSmTFRPLSQCLFWFLVADLATLTWIGGQPVEHPFIIIGQMA 337
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
241-341 1.39e-46

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 153.79  E-value: 1.39e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 241 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWFLVADLATLTW 320
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1914847933 321 IGGQPVEHPFIIIGQMASIVY 341
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
71-236 6.48e-45

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 152.01  E-value: 6.48e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  71 SMFFICLFLHVGRGIYYGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVW 148
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 149 GGFSVDKATLTRFFALHF-LLPFIIAALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLILMIMALLSLVL 227
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1914847933 228 FSPDLLGDP 236
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 16-191 3.69e-40

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 141.39  E-value: 3.69e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  16 FGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFTE- 94
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  95 -TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRFFALH-FLLPFII 172
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 1914847933 173 AALVMVHLLFLHETGSNNP 191
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
petB CHL00070
cytochrome b6
 7-191 5.48e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 122.14  E-value: 5.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933   7 PSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTADTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIY 86
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933  87 YGSYTFTE--TWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMSLVEWVWGGFSVDKATLTRFFAL 164
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*...
gi 1914847933 165 H-FLLPFIIAALVMVHLLFLHETGSNNP 191
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 212-322 9.57e-12

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 62.50  E-value: 9.57e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:COG5679    45 ILGTIALCIGLAVL---DPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIE 116

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914847933 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:COG5679   117 NVNKFQNPFrRPVATAV--FLFGTLVTL-WLG 145
petD CHL00058
cytochrome b6/f complex subunit IV
 212-310 9.15e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 56.93  E-value: 9.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLL- 290
Cdd:CHL00058   44 ILGTIACNVGLAVL---EPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115

                          90       100
                  ....*....|....*....|
gi 1914847933 291 HTSKQRSMTFRPLSQCLFWF 310
Cdd:CHL00058  116 NVNKFQNPFRRPVATTVFLI 135
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 212-322 3.88e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.19  E-value: 3.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914847933 212 ILGLILMIMALLSLvlfSPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLH 291
Cdd:TIGR01156  44 ILGTIACVVGLAVL---DPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914847933 292 TSKQRSMTF-RPLSQCLfwFLVADLATLtWIG 322
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTV--FLFGTVVAL-WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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