|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
1.86e-136 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 389.57 E-value: 1.86e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTY 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
8.44e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 91.72 E-value: 8.44e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 14 TLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLF-SSMTNAwFTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 92 PTS------------CLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLL-LTSHSLNPI------ 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrLLVEAFPGLaadwql 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 153 LLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTL--LTFYL--YCLMTAAIFFTLDT-AKTLKL 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLlSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1917171644 228 STMMTAW----TKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.90e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 84.67 E-value: 5.90e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 23 SNHWMMAWTGLEINTLAILPLI-SKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 91 HPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNP------ILLTLMAITSATL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPsspfiqQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 165 GGWAGLNQTQIRKILAFSSISHLGWMAVIL----IYNPKLTLLTFYLYCLMTAAIF-----FTLDTAKTLKLSTMMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1917171644 236 KIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.26e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.84 E-value: 2.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 14 TLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 93 TSC------------LLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLL-------LTSHSLNPIL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 154 LTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTL--LTFYL--YCLMTAAIFFTLDTAKTLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1917171644 227 ---LSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
1.86e-136 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 389.57 E-value: 1.86e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTY 298
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
2.46e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 328.42 E-value: 2.46e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSY 298
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
2.07e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 325.99 E-value: 2.07e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSlNPILLTLMAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSY 297
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
3.54e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 287.13 E-value: 3.54e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIY 298
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
1.59e-80 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 247.19 E-value: 1.59e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSY 298
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
10-298 |
9.76e-69 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 217.11 E-value: 9.76e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 10 IMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQL 89
Cdd:MTH00041 10 ITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGP 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 90 THPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAITSATLGGWAG 169
Cdd:MTH00041 90 LNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 170 LNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSLTATLMLTLL 249
Cdd:MTH00041 170 LNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSIL 249
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1917171644 250 SLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00041 250 SLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISF 298
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
8.29e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 165.38 E-value: 8.29e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGqwditqLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLlltSHSLNPILLTLMAIT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 161 SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY 290
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-298 |
4.21e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 152.73 E-value: 4.21e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 1 MSPQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 81 TGQWDITqlthptscLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPI-LLTLMAI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAyLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 160 TSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTaKTLKLSTMMTAWTKIPS 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYK 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1917171644 240 LTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFF 290
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-296 |
1.13e-39 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 141.46 E-value: 1.13e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 12 SLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSmtnawfTGQWDITQLTH 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 92 PTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTLMAITSATLGGWAGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 172 QTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSLTATLMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1917171644 252 AGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-298 |
2.99e-35 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 129.41 E-value: 2.99e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 12 SLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMtnAWFTGQWditqlTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----LS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 92 PTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPiaLLLLTSHSLNPILLTLMAITSATLGGWAGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 172 QTQIRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLKLSTMMTAWTKIPSLTATLMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1917171644 252 AGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
8.44e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 91.72 E-value: 8.44e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 14 TLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLF-SSMTNAwFTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 92 PTS------------CLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLL-LTSHSLNPI------ 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrLLVEAFPGLaadwql 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 153 LLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTL--LTFYL--YCLMTAAIFFTLDT-AKTLKL 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLlSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1917171644 228 STMMTAW----TKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.38e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 87.39 E-value: 1.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 13 LTLGTTITISSNHWMMAWTGLEINTLAILPLI-SKPHHPRAIEAATKYFLVQAAASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 79 WFTGQWDITQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLltSHSLNPILLTLMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 159 ITSATLGGWAGLNQTQIRKILAFSSISHLGW----MAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLK--LSTMMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFvlwgIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1917171644 233 AWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
4.25e-19 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 86.80 E-value: 4.25e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 14 TLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 93 TS------------CLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLL-------LTSHSLNPIL 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 154 LTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTL--LTFYL--YCLMTAAIF-FTLDTAKTLKLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1917171644 229 TMMTAWTKI----PSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.90e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 84.67 E-value: 5.90e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 23 SNHWMMAWTGLEINTLAILPLI-SKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 91 HPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNP------ILLTLMAITSATL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPsspfiqQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 165 GGWAGLNQTQIRKILAFSSISHLGWMAVIL----IYNPKLTLLTFYLYCLMTAAIF-----FTLDTAKTLKLSTMMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1917171644 236 KIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.26e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.84 E-value: 2.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 14 TLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 93 TSC------------LLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLL-------LTSHSLNPIL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 154 LTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVILIYNPKLTL--LTFYL--YCLMTAAIFFTLDTAKTLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1917171644 227 ---LSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
10-296 |
6.87e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 77.36 E-value: 6.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 10 IMSLTLGTTITISSNHWMMAWTGLEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDI-- 86
Cdd:MTH00199 103 ILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqg 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 87 --TQLTHPTSCLLLTAAISMKLGLVPFH************ATGLLLATVMKFPPIALLLLTSHSLNPILLTlmAITSATL 164
Cdd:MTH00199 183 inSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIY 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 165 GGWAGLNQTQIRKILAFSSISHLGW----MAVILIYNPKLTLLTFYLYCLMTAAIFFTLDTAKTLK--LSTMMTAWTKIP 238
Cdd:MTH00199 261 GAIGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1917171644 239 SLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
8.34e-14 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 70.95 E-value: 8.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 30 WTGLEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTH----------PTSCLLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 100 AAISMKLGLVPFH************ATGLLLATVM-KFPPIALLLL--------TSHSLNPILLTLmAITSATLGGWAGL 170
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILRVltllfgadPALFLGTLLLVL-GLLTMLVGALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 171 NQTQIRKILAFSSISHLGWMAV-ILIYNPKLTLLTFYLY---CLMTAAIFFT----LDTAKTLKLSTMMTAWTKIPSLTA 242
Cdd:COG0651 292 AQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1917171644 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:COG0651 372 AFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
6.68e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 68.73 E-value: 6.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 3 PQAKLMSIMSLTLGTTITISSNHWMMAWTGLEINTLAILPLISKPHHPRAI---------EAATKYFLVQAAASTLLLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 74 SMTNAWFTGQ----WDITQLTHPTS----------CLLLTAAISMKLGLVPFH************ATGLLLATVMKFppI 139
Cdd:MTH00198 267 CALYFGFTGNegmlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 140 ALLLLTSHSLNPILLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWMAVIL---IYNPKLTLLTFYLYCLMTAAIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 217 FTL----------------------DTAKTLKLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 1917171644 275 MTPTATIIALLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.33e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 55.66 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 33 LEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTH--PTSCLLLTA------AISM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTAfgfvllALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 105 KLGLVPFH************A-TGLLLATVMKFPPIALLLLTSH----------SLNPILLTLMAITSATlGGWAGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVvTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLALLSMLV-GSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 174 QIRKILAFSSISHLGWMAVILIYNPKLTLL--TFYL--YCLMTAAIFFTL----DTAKTLKLSTMMTAWTKIPSLTATLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1917171644 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
3.05e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.46 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 51 RAIEAATKYFLVQAAASTLLL--FSsmtnaWFTGQ-------WDI------TQLTHPTSCLL----LTAAISMKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 112 H-----------************ATGLLLATVMkfppIALLLLTSHSLNPILLTLMAITSATLGGWAGLNQTQIRKILA 180
Cdd:CHL00049 234 HqwtpdvyegspTPVVAFLSVTSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 181 FSSISHLGWMAVILI-------YNPKLTLLTFYLYCLMTA---AIFFTLDTAkTLKLSTMMTAWTKIPSLTATLMLTLLS 250
Cdd:CHL00049 310 YSSIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMNLGTfacIVLFGLRTG-TDNIRDYAGLYTKDPFLALSLALCLLS 388
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1917171644 251 LAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRL 296
Cdd:CHL00049 389 LGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-288 |
5.42e-06 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 47.38 E-value: 5.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 49 HPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQW--DITQLTH---PTS-----CLLLTAAISMKLGLVPFH****** 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 119 ******ATGLLLATVM---------KFPpIALLLLTSHSLNPILLTLmAITSATLGGWAGLNQTQIRKILAFSSISHLGW 189
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 190 MAV-ILIYNPK-LTLLTFYL--YCLMTAAIFFTL----DTAKTLKLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFL 261
Cdd:COG1008 314 VLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
250 260
....*....|....*....|....*..
gi 1917171644 262 PKWLIIQELTKQemTPTATIIALLSLL 288
Cdd:COG1008 394 GEFLVLLGAFQV--NPWLAILAALGLI 418
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.73e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 45.43 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 50 PRAIEAATKYFLVQAAASTLLLF-SSMTNAWFTGQwdiTQL--------THPTSCLLLT-----AAISMKLGLVPFH*** 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 116 *********ATGLLLATVMKFPPIAL---LLLTSHSLNP----ILLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 189 WMAVILI------YNPKLTLLTFYLY---CLMTAAIFFTLDTAkTLKLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTG 259
Cdd:PRK02504 314 FVMIGLVagteagYASMVFYLLAYLFmnlGAFACVILFSLRTG-TDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 1917171644 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
149-298 |
2.54e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 42.29 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 149 LNPILLTLMAITsATLGGWAGLNQTQIRKILAFSSISHLGWmavILIYNPKLTLLTF-------YLYCLMTAAIFFTLDT 221
Cdd:PRK08668 271 FNYILAWLGNIS-IIVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAA 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 222 ----AKTLKLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLA 297
Cdd:PRK08668 347 viyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPL 426
|
.
gi 1917171644 298 Y 298
Cdd:PRK08668 427 A 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
148-298 |
2.87e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.06 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 148 SLNPILLTLMAIT---SATLGGWAGLNQTQIRKILAFSSISHLGWMAVILiynpKLTLLTFYLYCLMTAAIFftldtakt 224
Cdd:COG1009 269 ALSPVWLTVVAIIgaiTALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLTHAFF-------- 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 225 lKLSTMMTA------------------WTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMTPTATIIALL 285
Cdd:COG1009 337 -KALLFLGAgsvihatgtrdirkmgglRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALL 415
|
170
....*....|....
gi 1917171644 286 -SLLGLFFYLRLAY 298
Cdd:COG1009 416 gAFLTAFYSFRLFF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
7.39e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 40.85 E-value: 7.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 33 LEINTLAILPLIS-KPHHPRAIEAATKYFLVQAAASTLLLFS---------SMTNAWFTGQWDITQLTHPTSCL-LLTAA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 102 ISMKLGLVPFH************ATG--LLLATVMKFPPIALLLLTSHSLNPILLTL------MAITSATLGGWAGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPSSISamLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 174 QIRKILAFSSISHLGWMAV---ILIYNPKLTLLTFYLYCLMTAAIFFTLDTA-----------------KTLKLSTMMTA 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgVGLAALGDPAMASYGEIALAGGIYHIVNHAlykallfltagaviyetGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 1917171644 234 WTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-299 |
8.04e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.70 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 53 IEAATKYFLVQAAASTLLL---------FSSMTNAWFTGQWDITQLTHP--TSCLLLTAAISMKLGLVPFH********* 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATltTIALLFLLAFGMKAALFPFMWLPAAYHTP 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 122 ***ATGLLLATVMKFPPIAL-----LLLTSHS-LNPILLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLGWM-AVIL 194
Cdd:PRK12663 237 NTEVAALFAALLTKVGIYALirvftLLFPQEReLLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFIlLGLA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 195 IYNPK-LTLLTFYLYCLMT--AAIFFTLDTAKTL----KLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12663 317 LGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
250 260 270
....*....|....*....|....*....|....*
gi 1917171644 268 Q-ELTKQEMTPTATIIA--LLSLLGLFFYLRLAYW 299
Cdd:PRK12663 397 QgALDNGAYILLALMLItsLITMYSLFRIFFLAYW 431
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
1.82e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 39.63 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 55 AATKYFLVQAAASTLLLFSSMTNAWFTGQ--WDITQLTH---PTSCLLLT-----AAISMKLGLVPFH************ 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 125 ATGLLLATVM-KFPPIAL------LLLTSH-SLNPILLTLmAITSATLGGWAGLNQTQIRKILAFSSISHLGWmavILIY 196
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALirfnvqMLPDAHvYFAPALAIL-GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF---VLLG 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 197 NPKLT-------LLTFYLYCLMTAAIFF----TLDTAKTLKLSTMMTAWTKIPSLTATLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK12561 294 IAAFTdlgisgaMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELT 373
|
250 260
....*....|....*....|....*..
gi 1917171644 266 IIQELTKQEM--TPTATIIALLSLLGL 290
Cdd:PRK12561 374 VFLGITSSDVysSTFRTITILLAAVGL 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.32e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 39.16 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 33 LEINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTH--PTSCLLLTAAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 111 FH************ATGLLLATVMKFPPIALLLLTSHSLNPI--LLTLMAITSATLGGWAGLNQTQIRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 189 WMAVILIYNPKLTLltfyLYCLMTAAIFFTLDTAKTLKL----STMMTAWTKIPsltatLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLCAGALPSRNFteliSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 1917171644 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
5.12e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 38.09 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 34 EINTLAILPLISKPHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWFTGQWDITQ-----LTHPTSCLLLTAAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 109 V------PFH************ATGLLLATVMKFPPIALLL--------LTSHSLNPILLTLMAITSATLGGWAGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917171644 175 IRKILAFSSISHLGWMAVILIYNPKLTLLTFYLYC----LMTAAIFF----TLDTAKTLKLSTMMTAWTKIPSLTATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1917171644 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| |
