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Conserved domains on  [gi|1930033035|gb|QPB04048|]
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flagellar hook-associated protein FlgK [Yersinia pestis]

Protein Classification

flagellar hook-associated protein FlgK( domain architecture ID 11482616)

flagellar hook-associated protein FlgK forms the junction between the hook and the filament in the flagellum together with FlgL and provides a structural base where flagellin, a filament-forming protein, is inserted for the initiation of filament elongation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-453 0e+00

flagellar hook-associated protein FlgK; Validated


:

Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 729.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK07191    1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK07191   81 QGYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK07191  161 RDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT-KITLHFSGATQGMNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQDLF 319
Cdd:PRK07191  241 LAVDTSSVGTqKLTLHFSGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGAPGKPLF 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 320 VFNPSDPNGMLQLSAITAEQLALAAHGKPAGDNSNLFELLDIR--KTPVTGMKNVPLDDAATALVGYIAITSNRNHSELE 397
Cdd:PRK07191  321 TFNPSDPNGMLQLSAIKPEELALSGDPKPPGDNSNLFELLEIRsqKTDLPGMGNVSLGDAATALVGYIAITSNQNHSELE 400

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035 398 NAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:PRK07191  401 NAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 456
 
Name Accession Description Interval E-value
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-453 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 729.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK07191    1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK07191   81 QGYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK07191  161 RDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT-KITLHFSGATQGMNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQDLF 319
Cdd:PRK07191  241 LAVDTSSVGTqKLTLHFSGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGAPGKPLF 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 320 VFNPSDPNGMLQLSAITAEQLALAAHGKPAGDNSNLFELLDIR--KTPVTGMKNVPLDDAATALVGYIAITSNRNHSELE 397
Cdd:PRK07191  321 TFNPSDPNGMLQLSAIKPEELALSGDPKPPGDNSNLFELLEIRsqKTDLPGMGNVSLGDAATALVGYIAITSNQNHSELE 400

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035 398 NAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:PRK07191  401 NAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 456
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-453 5.23e-126

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 374.21  E-value: 5.23e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:COG1256     3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSN-ESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQ 159
Cdd:COG1256    83 LGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADADS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 160 QRDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAA 239
Cdd:COG1256   163 QIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTAS 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 240 ELAVDTSSVDT----KITLHFSGATQG-MNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAP 314
Cdd:COG1256   243 ELSFTPSAGDPgglsTVTLDDSGVPSDaTSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGNP 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 315 GQDLFVFNPSDPNGMLQLSAIT--------------AEQLALA-AHGKPAGDNSNLFELLDIRKTPVTG--MKNVPLDDA 377
Cdd:COG1256   323 GGDLFDIDPSITGGTLTPFDTVgagnisvnpavigdPSLLAAAnSDGGGAGDNTNALALAALQDAKLVFdsGGSGTLSDY 402

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035 378 ATALVGYIAITSNRNHSELENAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:COG1256   403 YASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIV 478
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-314 9.06e-102

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 306.58  E-value: 9.06e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   2 NFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQQ 81
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  82 QYYDAGEQYLNAVELMVSNESTS-LATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:TIGR02492  81 GYADSRASGLSKIEQIFNDLDGSgLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT----------KITLHFSGATQGMNmSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDF 310
Cdd:TIGR02492 241 SSTSPLTADTtggkvggdgvYLPSGSSKVTISSD-LQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADL 319


                  ....
gi 1930033035 311 TGAP 314
Cdd:TIGR02492 320 TGSA 323
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 414-452 1.66e-07

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 48.42  E-value: 1.66e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1930033035 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452
Cdd:pfam06429  36 SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
 
Name Accession Description Interval E-value
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-453 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 729.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK07191    1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK07191   81 QGYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK07191  161 RDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT-KITLHFSGATQGMNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQDLF 319
Cdd:PRK07191  241 LAVDTSSVGTqKLTLHFSGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGAPGKPLF 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 320 VFNPSDPNGMLQLSAITAEQLALAAHGKPAGDNSNLFELLDIR--KTPVTGMKNVPLDDAATALVGYIAITSNRNHSELE 397
Cdd:PRK07191  321 TFNPSDPNGMLQLSAIKPEELALSGDPKPPGDNSNLFELLEIRsqKTDLPGMGNVSLGDAATALVGYIAITSNQNHSELE 400

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035 398 NAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:PRK07191  401 NAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 456
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-453 5.23e-126

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 374.21  E-value: 5.23e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:COG1256     3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSN-ESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQ 159
Cdd:COG1256    83 LGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADADS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 160 QRDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAA 239
Cdd:COG1256   163 QIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTAS 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 240 ELAVDTSSVDT----KITLHFSGATQG-MNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAP 314
Cdd:COG1256   243 ELSFTPSAGDPgglsTVTLDDSGVPSDaTSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGNP 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 315 GQDLFVFNPSDPNGMLQLSAIT--------------AEQLALA-AHGKPAGDNSNLFELLDIRKTPVTG--MKNVPLDDA 377
Cdd:COG1256   323 GGDLFDIDPSITGGTLTPFDTVgagnisvnpavigdPSLLAAAnSDGGGAGDNTNALALAALQDAKLVFdsGGSGTLSDY 402

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035 378 ATALVGYIAITSNRNHSELENAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:COG1256   403 YASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIV 478
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-314 9.06e-102

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 306.58  E-value: 9.06e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   2 NFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQQ 81
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  82 QYYDAGEQYLNAVELMVSNESTS-LATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:TIGR02492  81 GYADSRASGLSKIEQIFNDLDGSgLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT----------KITLHFSGATQGMNmSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDF 310
Cdd:TIGR02492 241 SSTSPLTADTtggkvggdgvYLPSGSSKVTISSD-LQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADL 319


                  ....
gi 1930033035 311 TGAP 314
Cdd:TIGR02492 320 TGSA 323
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 6-446 1.15e-61

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 208.33  E-value: 1.15e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA-------GNGVNVDGIRRLSQQYVVMQEWRAN 78
Cdd:PRK07739   10 TARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGMNRpkipgqmGTGVEAGSVERIRDQFLDIQYRREN 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  79 SQQQYYDAGEQYLNAVELmVSNE--STSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKS 156
Cdd:PRK07739   90 NKLGYWETKADALSQMED-IMNEpsDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLTDIQND 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 157 IGQQRDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAE---------DGTYRISVK 227
Cdd:PRK07739  169 LKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEYNKsggnaledaEGTFRIDIL 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 228 QG---QPLVNGAVAA--ELAVDTSSVDTKITLHFSGATQGMNMSCG-------GQLGGI---------NDYELTTLKKLQ 286
Cdd:PRK07739  249 GGngkGTLVDGKDSTvnELSVNKDDVTGLVTDLSLGGTTVSWDDTGqpvnpssGKLKGLlemygymsgNGEEKGLYPEML 328

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 287 DSTQEMAKTVADKFNDQLGKGTDFTGAPGQDLFVFNPSDPNGMLQLSAITAEQLA----LAAHGKP--AGDNSNLFELLD 360
Cdd:PRK07739  329 NDLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTGDSTKGAAKTIKVSDDILAdlnnIAAASDDgeLGDGSNALNLAN 408

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 361 IR-KTPVTGMKNVPLDDAATALVGYIAITSNRNHSELENAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVI 439
Cdd:PRK07739  409 LKdFKLNSGLDTTTFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMTNMIKFQHAYNAAARMI 488


                  ....*..
gi 1930033035 440 ATGDKLF 446
Cdd:PRK07739  489 TAIDEML 495
flgK PRK08147
flagellar hook-associated protein FlgK; Validated
 1-453 3.53e-56

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236165 [Multi-domain]  Cd Length: 547  Bit Score: 194.90  E-value: 3.53e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK08147    2 SSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAQAGSTLTAGGWIGNGVYVSGVQREYDAFITNQLRAAQTQ 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK08147   82 SSGLTTRYEQMSKIDNLLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGVNTA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQI--LKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVA 238
Cdd:PRK08147  162 IGSSVDQINNYAKQIASLNDQItrLTGVGAGASPNDLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTA 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 239 AELAVDTSSVD-TKITLHFSGATQGM-----NMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTG 312
Cdd:PRK08147  242 YQLAAVPSSADpTRTTVAYVDGTAGNieipeKLLTTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAGFDANG 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 313 APGQDLFVFNPSD--PNGMLQLSA-ITAE------------------------QLA------------------------ 341
Cdd:PRK08147  322 DAGEDFFSIGKPAvlSNSKNTGTAsLTAEytdasavkatdykisfdgtnwqvtRLSdnttftvtpdangktlefdglkvt 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 342 --------------------------------LAAHGKPAG---DNSNLFELLDIR-KTPVTGMKNvpLDDAATALVGYI 385
Cdd:PRK08147  402 vtgtpaandsftlkpvsdaivnmdvlitdeskIAMASEADGgdsDNRNGQALLDLQnKKLVGGKKS--FNDAYASLVSDV 479

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1930033035 386 AITSNRNHSELENAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:PRK08147  480 GNQTATLKTSSTTQANVVTQLTNQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNIR 547
flgK PRK06945
flagellar hook-associated protein FlgK; Validated
 1-319 2.09e-49

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235895 [Multi-domain]  Cd Length: 651  Bit Score: 178.29  E-value: 2.09e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK06945    2 SSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTGSGYLGQGVNVVTVKRQYSQYLSAQLNNAQAA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 ----QQYYDAGEQYLNavelMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKS 156
Cdd:PRK06945   82 ssslSTYYSQISQLNN----YLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 157 IGQQRDITVKEINSLTRSIADYNQQILK-NRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNG 235
Cdd:PRK06945  158 VNTQLTSSVTQINSYTKQIAQLNDQIAKaESSQGQPPNDLLDQRDQLVSELSKLVGVTVVQQDDGGYNVFVGNGQPLVVG 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 236 AVAAELAVDTSSVD-TKITLHFSGATQGMNMS-----CGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTD 309
Cdd:PRK06945  238 NQSYQLTTVPSPSDpSRLTVAGYKPPGTTQELpdsslTGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGID 317

                         330
                  ....*....|
gi 1930033035 310 FTGAPGQDLF 319
Cdd:PRK06945  318 LNGNLGGDLF 327
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 1-351 1.98e-48

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 176.07  E-value: 1.98e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK05683    1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK05683   81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVnQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK05683  161 LSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTV-VERDGNYDVYIGSGQPLVVGNTANT 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDTSSVDT---KITLHFSGATQGM-NMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQ 316
Cdd:PRK05683  240 LSVVPGPSDPsryNVQLNRGSSTQDVtSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFGS 319

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1930033035 317 DLFvfnpSDPNgmlqlSAITAEQLALAAHGKPAGD 351
Cdd:PRK05683  320 SLF----GDIN-----SADAISQRSLAKNGNSAGS 345
flgK PRK12715
flagellar hook-associated protein FlgK; Provisional
 1-343 1.28e-34

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183698 [Multi-domain]  Cd Length: 649  Bit Score: 136.79  E-value: 1.28e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK12715    1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVSSIYRNVDQFANAQVRSTLSY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK12715   81 RTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNrsdgNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK12715  161 VTESVKIINRITKELAEVNGKLLGN----NNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRD 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LAVDT---SSVDTKITLHFSGATQG--MNMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPG 315
Cdd:PRK12715  237 LVVGTgkdSIFGTKIFLSSGGNNQVdiTDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNSQIG 316

                         330       340
                  ....*....|....*....|....*....
gi 1930033035 316 QDLFV-FNpsDPNGMLQLSAITAEQLALA 343
Cdd:PRK12715  317 KDFFTdFN--SPGQMLKRSTASADNSGTA 343
flgK PRK06799
flagellar hook-associated protein FlgK; Validated
 6-453 1.53e-29

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180699 [Multi-domain]  Cd Length: 431  Bit Score: 119.60  E-value: 1.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADG--QGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQQQY 83
Cdd:PRK06799    8 TPLSGMLAAQMGLQTTQQNLSNIHTPGYVRQMVNYGSVGASGglLPEQQIGYGVQTLGVDRITDEVKTKQYNDQLSQLSY 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  84 YDAGEQYLNAVELMVSNE-STSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQRD 162
Cdd:PRK06799   88 YNYMNSALSRVESMVGTTgKNSLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTTEDIE 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 163 ITVKEINSLTRSIADYNQQIlknRSDGNNI-NDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPL-VNGAVAAE 240
Cdd:PRK06799  168 AHVNEFNRLAKSLAEANKKI---GQAGTQVpNQLLDERDRILTEMSKYANIEVSYESMNPNIASVRMNGVLtVNGQDTYP 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LavdtSSVDTKITLHFSGATQGMNMSCGGQLGGINDYelTTLKKLQDSTQEMAKTVADKFNDQLGKGTdFTGAPGQDLfV 320
Cdd:PRK06799  245 L----QLNKTKEPMEFEIYGSEIPLPSGAIISAIDTK--AKIKSYKKNLEELMSSLKKAVNTVMGKSF-FVGDSAKKW-K 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 321 FNPSDPNGM--LQLSAITAEQLALAAHGKPAgDNSNLFELLDIRKTPVTGMKnvplddaaTALVGYIAItsnrnHSELen 398
Cdd:PRK06799  317 LNPEFAKDVskMKISAETANKLAAITDDKYK-EGLSYKQALDQFIVGVASDK--------SAVNAYQKI-----HTDL-- 380

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1930033035 399 aentLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:PRK06799  381 ----LEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSII 431
flgK PRK12714
flagellar hook-associated protein FlgK; Provisional
 1-319 8.50e-29

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183697 [Multi-domain]  Cd Length: 624  Bit Score: 119.28  E-value: 8.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK12714    1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQ 160
Cdd:PRK12714   81 LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 161 RDITVKEINSLTRSIADYNQQILKNRSDGNniNDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAAE 240
Cdd:PRK12714  161 LTSSVDEVNRLTQQIAKINGTIGSSAQNAA--PDLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTASK 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 241 LaVDTSSVDTKITLHFSGATQGMNM-----SCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPG 315
Cdd:PRK12714  239 L-TTVADPYQPTKLQVAMQTQGQNVslspsSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGMDLYGAMG 317


                  ....
gi 1930033035 316 QDLF 319
Cdd:PRK12714  318 GNFF 321
flgK PRK06665
flagellar hook-associated protein FlgK; Validated
 10-327 1.67e-27

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180650 [Multi-domain]  Cd Length: 627  Bit Score: 115.54  E-value: 1.67e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  10 GMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIG---------ADGQGGVnaGNGVNVDGIRRLSQQYVVMQEWRANSQ 80
Cdd:PRK06665   14 SLFAHKQALQTTGHNISNASTKGYSRQRVTMKTFDplyapslnrAEKPGQI--GQGVEIQSIERIRDELLDSRIIEESGR 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  81 QQYYDAGEQYLNAVElMVSNE--STSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIG 158
Cdd:PRK06665   92 LGYWKTKDKYLSQLE-QVYNEpeDQSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLERIRDMAN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 159 QQRDITVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVkQGQPLVNGAVA 238
Cdd:PRK06665  171 DEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIERSDPDEFMIHI-GGRHLVQGNIA 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 239 AELAVDTS-SVDTKITLHFSGATQGMNMScGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQD 317
Cdd:PRK06665  250 NELDLEANpPNEGYWDILWSANGDPALLR-TGKLGALIELRDTDIRDEINELDTLAINIVDLVNEIHRSGFGLNGKTGRD 328

                         330
                  ....*....|
gi 1930033035 318 LFVFNPSDPN 327
Cdd:PRK06665  329 FFTQEYKLTN 338
flgK PRK07521
flagellar hook-associated protein FlgK; Validated
 6-453 8.33e-25

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236038 [Multi-domain]  Cd Length: 483  Bit Score: 106.56  E-value: 8.33e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGAdgqggvnagnGVNVDGIRRLSQQYVVMQEWRANSQQQYYD 85
Cdd:PRK07521    9 TAQSGLTATSRQTSVVSRNIANAGTPGYSRREASLVSGPA----------GGQVVGISRAQDPALLAQRLLATSAAAAQD 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  86 AGEQYLNAVELMVS--NESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNN----VNNFIVQQKKSIGQ 159
Cdd:PRK07521   79 TLADGLERLASTVGdnDYEGSPSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDasdaVQSARADADAEIAD 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 160 QrditVKEINSLTRSIADYNQQILKNRSDGNNINDLLDKQELQIKKLSGLIETQVNQAEDGTYRISVKQGQPLVNGAVAA 239
Cdd:PRK07521  159 S----VDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVTTVTRDNNDMALYTDGGVTLFETTPRT 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 240 ELAVDTSSVDTKITLH--------FSGATQGMNMScGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFndqlgKGTDFT 311
Cdd:PRK07521  235 VTFTPTATYTAGTTGNavyidgvpLTGGSGVMPLA-GGSLAALLQLRDEIAPTYQAQLDEIARGLITRF-----AESDPT 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 312 GAPGQ-DLFVFN--PSDP-NGMLQLSA-----------------------ITAEQLALAAHGKPAGDNSNLFEL---LDI 361
Cdd:PRK07521  309 GAAGDpGLFTDSgaPADPaAGEAGLAGrisvnaavdpsqggdpwllrdggINGAAYLGANTTGAAGFSTRLNALvdaLSA 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 362 RKT--PVTGMK-NVPLDDAATALVGYIAITSNRNHSELENAENTLNQATRYHESFSGVNNDEEAMNLMEYQRAYQSNMKV 438
Cdd:PRK07521  389 PRTfdSAAGLSgSSSLMDLAASSLSWLEQQRSSASSEASYASALLSRADEALSNATGVDTDDEMALLLDLEQSYAASAKV 468

                         490
                  ....*....|....*
gi 1930033035 439 IATGDKLFSDLLALV 453
Cdd:PRK07521  469 ISTVDEMLDSLLDAV 483
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 6-247 5.89e-24

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 104.75  E-value: 5.89e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQQQYYD 85
Cdd:PRK08471   10 TGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTGGGNVGTGTDIETIVRIHDEFVYSRYKKASTELEYTD 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  86 AGEQYLN-AVELMVSNESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQRDIT 164
Cdd:PRK08471   90 YEFSTLQeASQYFPDLDDTGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDTLQKKVNEELKVT 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 165 VKEINSLTRSIADYNQQI--LKNRSDGNNINDLLDKQ---ELQIKKLSG--LIETQVNQA---------EDGTYRISVkQ 228
Cdd:PRK08471  170 VDEINSLGKQIAEINKQIkeVEAGKTLKHANELRDKRdelELTLSKLVGanVFKSSIKSDsrldttsadFGESYNLNI-G 248

                         250
                  ....*....|....*....
gi 1930033035 229 GQPLVNGAVAAELAVDTSS 247
Cdd:PRK08471  249 GFNIVDGSNFHPLVLDEDE 267
flgK PRK08871
flagellar hook-associated protein FlgK; Validated
 15-319 2.33e-23

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 181572 [Multi-domain]  Cd Length: 626  Bit Score: 103.00  E-value: 2.33e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  15 QAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWRANSQQQYYDAGEQYLNAV 94
Cdd:PRK08871   17 QRQLNTTGHNISNVNTEGYSRQSVIQGTNDPRQFGGSTYGMGVHVENVRRSWDQFAVNELNLSTTNLANKTDTEANLDML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035  95 ELMVSN-ESTSLATGLNNFFSSLSAATQLPDSPPMRQQIIESANAMALRFNNVNNFIVQQKKSIGQQRDITVKEINSLTR 173
Cdd:PRK08871   97 SSMLSSvASKKIPENLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQTLNDFHETVRQQKDVTNKKLDLGVERINQIAL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035 174 SIADYNQQILknRSDGNNiNDLLDKQELQIKKLSGLIETQVNQAEDG-TYRISVKQGQPLVNGAVAAELAVDTSSVD--- 249
Cdd:PRK08871  177 EIRDIHRLMM--RTPGPH-NDLMDQHEKLVKELSQYTKVTVTPRKNAeGFNVHIGNGHTLVSGTEASQLKMIDGYPDphq 253

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1930033035 250 TKITLHFSGATQGM-NMSCGGQLGGINDYELTTLKKLQDSTQEMAKTVADKFNDQLGKGTDFTGAPGQDLF 319
Cdd:PRK08871  254 RRLAMVEGKGLKAIkADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQGLDLRGNVGGNLF 324
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 4-68 8.20e-09

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 55.72  E-value: 8.20e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1930033035   4 IRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA-GNGVNVDGIRRLSQQ 68
Cdd:TIGR03506   3 LYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSGSGQvGGGVRTSGVATDFSQ 68
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 414-452 1.66e-07

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 48.42  E-value: 1.66e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1930033035 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452
Cdd:pfam06429  36 SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
5-68 1.75e-07

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 53.25  E-value: 1.75e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1930033035   5 RTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA---GNGVNVDGIRRLSQQ 68
Cdd:COG1749     6 NTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVAQSLSGANPtqvGGGVRVASVAQIFTQ 72
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
6-68 7.37e-07

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 50.20  E-value: 7.37e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAE--------------QSAIGADGQGGVNAGNGVNVDGIRRLSQQ 68
Cdd:COG4786     3 TAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVfedllyqlirrpgaPSSQGTQTPVGLQLGTGVRVAATQTDFTQ 79
FlgC COG1558
Flagellar basal body rod protein FlgC [Cell motility];
1-64 1.21e-05

Flagellar basal body rod protein FlgC [Cell motility];


Pssm-ID: 441166 [Multi-domain]  Cd Length: 135  Bit Score: 44.72  E-value: 1.21e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPG------YSRQRAEQSAIGADGQGGvnaGNGVNVDGIRR 64
Cdd:COG1558     4 FSAFDIAGSGLTAQRLRLNVIASNLANANSTRtsdggpYRRKQVVFEAVLDRAGSG---AAGVRVAGIVE 70
flgE PRK06803
flagellar basal body protein FlaE;
1-62 1.41e-05

flagellar basal body protein FlaE;


Pssm-ID: 235862 [Multi-domain]  Cd Length: 402  Bit Score: 47.07  E-value: 1.41e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1930033035   1 MNFiRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGvnagnGVNVDGI 62
Cdd:PRK06803    1 MSF-NIALSGLNATTQQLNTISNNIANSSTKGFKGSRTEFSSIYNGGQPG-----GVEVSSV 56
flgE PRK05682
flagellar hook protein FlgE; Validated
 5-68 2.13e-05

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 46.37  E-value: 2.13e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   5 RTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAE------QSAIGADGQggvnAGNGVNVDGIRRLSQQ 68
Cdd:PRK05682    4 NTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAEfadlyaNSAGTNPTQ----VGSGVKVAGVAQQFSQ 69
flgG PRK12692
flagellar basal body rod protein FlgG; Reviewed
 1-68 1.09e-03

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 139158 [Multi-domain]  Cd Length: 262  Bit Score: 40.60  E-value: 1.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAE-----------QSAIGADGQG----GVNAGNGVNVDGIRRL 65
Cdd:PRK12692    1 MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEftdllyqaerqQGVPNQAGQEavpeGAMLGLGVRAAAIRNL 80


                  ...
gi 1930033035  66 SQQ 68
Cdd:PRK12692   81 HRQ 83
flgC PRK12632
flagellar basal body rod protein FlgC; Provisional
 9-54 1.14e-03

flagellar basal body rod protein FlgC; Provisional


Pssm-ID: 183637 [Multi-domain]  Cd Length: 130  Bit Score: 39.02  E-value: 1.14e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1930033035   9 SGMQATQAHLNATSMNIANMHTPGYSRQRAE-QSAIGAD-GQGGVNAG 54
Cdd:PRK12632   13 SGMRAQALRLRHVSENIANADTPGYRRKTVSfQEARDFDpGSGLVSTG 60
Flg_bb_rod pfam00460
Flagella basal body rod protein;
4-33 1.24e-03

Flagella basal body rod protein;


Pssm-ID: 459821 [Multi-domain]  Cd Length: 30  Bit Score: 36.01  E-value: 1.24e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1930033035   4 IRTAFSGMQATQAHLNATSMNIANMHTPGY 33
Cdd:pfam00460   1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
flgG PRK12816
flagellar basal body rod protein FlgG; Reviewed
 6-68 1.40e-03

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183766 [Multi-domain]  Cd Length: 264  Bit Score: 40.18  E-value: 1.40e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAE------QSAIGADGQG--------GVNAGNGVNVDGIRRLSQQ 68
Cdd:PRK12816    7 TAASGMNAQQFNIDTIANNLANVNTTGFKKIRAEfedliyQTQRRAGTPAtedtvtplGVQVGHGVKVAATQRLFEQ 83
flgG PRK12693
flagellar basal body rod protein FlgG; Provisional
 6-39 1.53e-03

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183687 [Multi-domain]  Cd Length: 261  Bit Score: 40.23  E-value: 1.53e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1930033035   6 TAFSGMQATQAHLNATSMNIANMHTPGYSRQRAE 39
Cdd:PRK12693    7 IAKTGLDAQQTNIDVISNNLANVNTTGFKKSRAV 40
flgC PRK05681
flagellar basal body rod protein FlgC; Reviewed
 1-64 1.92e-03

flagellar basal body rod protein FlgC; Reviewed


Pssm-ID: 235556 [Multi-domain]  Cd Length: 135  Bit Score: 38.27  E-value: 1.92e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1930033035   1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPG------YSRQRAEQSAIGADGQGgvnaGNGVNVDGIRR 64
Cdd:PRK05681    4 FSSFNIAGSGLSAQSQRLNVISSNIANADSTAapdgdpYRRKQVVFAAELDPGQG----TGGVKVAKIVE 69
FlgC TIGR01395
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ...
 9-64 2.00e-03

flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 130462 [Multi-domain]  Cd Length: 135  Bit Score: 38.49  E-value: 2.00e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1930033035   9 SGMQATQAHLNATSMNIANMHT---PG---YSRQRAEQSAIGADGQGGVNAGNGVNVDGIRR 64
Cdd:TIGR01395   9 SALSAQRVRMNVVSSNLANADStrtPAgdpYRRRRPVFEAELFQDRASRPGGSGVKVAKIVE 70
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
424-453 8.35e-03

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 38.23  E-value: 8.35e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1930033035 424 NLMEYQRAYQSNMKVIATGDKLFSDLLALV 453
Cdd:COG1749   384 NMIVAQRAYQANAKVITTSDEMLQTLVNLK 413
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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