hypothetical protein J1G47_11555 (plasmid) [Glaesserella parasuis]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| AraC_N super family | cl23564 | AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of ... |
3-24 | 6.38e-06 | ||
AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain. The actual alignment was detected with superfamily member pfam06719: Pssm-ID: 461994 Cd Length: 152 Bit Score: 40.18 E-value: 6.38e-06
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| Name | Accession | Description | Interval | E-value | ||
| AraC_N | pfam06719 | AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of ... |
3-24 | 6.38e-06 | ||
AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain. Pssm-ID: 461994 Cd Length: 152 Bit Score: 40.18 E-value: 6.38e-06
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| Name | Accession | Description | Interval | E-value | ||
| AraC_N | pfam06719 | AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of ... |
3-24 | 6.38e-06 | ||
AraC-type transcriptional regulator N-terminus; This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain. Pssm-ID: 461994 Cd Length: 152 Bit Score: 40.18 E-value: 6.38e-06
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