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Conserved domains on  [gi|2033712556|gb|QUW17285|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Subdoluseps vietnamensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 594.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 241 TLTCILFLNPGNT-ISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLP 319
Cdd:MTH00111  241 TLTTILFLNPSTLnLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320

                  ..
gi 2033712556 320 PQ 321
Cdd:MTH00111  321 PQ 322
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 594.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 241 TLTCILFLNPGNT-ISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLP 319
Cdd:MTH00111  241 TLTTILFLNPSTLnLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320

                  ..
gi 2033712556 320 PQ 321
Cdd:MTH00111  321 PQ 322
NADHdh pfam00146
NADH dehydrogenase;
12-307 8.70e-122

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 351.78  E-value: 8.70e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  92 TPLPM--PATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQM 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 170 LSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFLN 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2033712556 250 PGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
3-307 2.37e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 323.62  E-value: 2.37e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   3 QLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTL 82
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  83 ALFLALMIWTPLPM--PATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHH-WLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2033712556 240 NTLTCILFL---------NPGNTISPALFtinLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:COG1005   247 SALATTLFLggwlgpfpiLPLGGLPGILW---FLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 594.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 241 TLTCILFLNPGNT-ISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLP 319
Cdd:MTH00111  241 TLTTILFLNPSTLnLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320

                  ..
gi 2033712556 320 PQ 321
Cdd:MTH00111  321 PQ 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 548.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00134    2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:MTH00134   82 MLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVII 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00134  162 FTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMN 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 241 TLTCILFLNPGNTIS-PALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLP 319
Cdd:MTH00134  242 TLSAILFLGASHIPTlPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLP 321

                  ..
gi 2033712556 320 PQ 321
Cdd:MTH00134  322 PQ 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 547.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00071    1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:MTH00071   81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00071  161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 241 TLTCILFLNPG-NTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLP 319
Cdd:MTH00071  241 TLSTILFLGSTyNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320

                  ..
gi 2033712556 320 PQ 321
Cdd:MTH00071  321 PM 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
6-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 527.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   6 LYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALF 85
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  86 LALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGF 165
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 166 TMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCI 245
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2033712556 246 LFLNPG-NTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLPPQ 321
Cdd:MTH00104  241 LFLGAFhNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
4-320 7.33e-158

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 443.58  E-value: 7.33e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   4 LLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLA 83
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  84 LFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTG 163
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 164 GFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLT 243
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2033712556 244 CILFLNPGNTispalfTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLPP 320
Cdd:MTH00218  241 VILFLGTSLT------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
2-320 2.19e-157

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 442.88  E-value: 2.19e-157
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   2 NQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPT 81
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  82 LALFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIIL 161
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 162 TGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNT 241
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 242 LTCILFLNPGNTISPaLFTINLM---LKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGL 318
Cdd:MTH00040  241 LSVILFLGGGSPFNE-IFPINIIivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319

                  ..
gi 2033712556 319 PP 320
Cdd:MTH00040  320 PP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
4-317 4.22e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 352.51  E-value: 4.22e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   4 LLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLA 83
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  84 LFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTG 163
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 164 GFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLT 243
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2033712556 244 CILFLNPGNTISpalftinLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSG 317
Cdd:MTH00195  241 TILFLGGGGTII-------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
12-307 8.70e-122

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 351.78  E-value: 8.70e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  92 TPLPM--PATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQM 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 170 LSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFLN 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2033712556 250 PGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
5-306 6.14e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 349.55  E-value: 6.14e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   5 LLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLAL 84
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  85 FLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGG 164
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 165 FTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTC 244
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2033712556 245 ILFLNpGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFL 306
Cdd:MTH00143  241 VLFFG-GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
4-315 2.97e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 345.22  E-value: 2.97e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   4 LLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLA 83
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  84 LFLALMIWTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTG 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 164 GFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLT 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2033712556 244 CILFLNPGntispaLFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTML 315
Cdd:MTH00193  241 VLMFLGGD------LLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
3-307 2.37e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 323.62  E-value: 2.37e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   3 QLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTL 82
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  83 ALFLALMIWTPLPM--PATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVII 160
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 161 LTGGFTMQMLSTTQEHH-WLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2033712556 240 NTLTCILFL---------NPGNTISPALFtinLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:COG1005   247 SALATTLFLggwlgpfpiLPLGGLPGILW---FLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
12-311 7.95e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 321.60  E-value: 7.95e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIW 91
Cdd:MTH00225    8 LIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILW 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  92 TPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQMLS 171
Cdd:MTH00225   88 SLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFS 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 172 TTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFLNPG 251
Cdd:MTH00225  168 YNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGF 247
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 252 NTISPALFtinlMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITL 311
Cdd:MTH00225  248 FVTIDLFL----ILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
1-320 1.09e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 322.07  E-value: 1.09e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00216    2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMP--ATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAV 158
Cdd:MTH00216   82 VLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 159 IILTGGFTMQMLSTTQEHH-WLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIM 237
Cdd:MTH00216  162 LLCVGSLSITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 238 MMNTLTCILFLNPGNTISPALFTINLM--LKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTML 315
Cdd:MTH00216  242 LMSCLTTILFLGGWLSPIKYFKGGAGWfgLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321

                  ....*
gi 2033712556 316 SGLPP 320
Cdd:MTH00216  322 NGPPP 326
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
15-320 7.79e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 319.75  E-value: 7.79e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  15 IIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIWTPL 94
Cdd:MTH00054   12 LVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVI 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  95 PM--PATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQMLST 172
Cdd:MTH00054   92 PYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 173 TQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFL---- 248
Cdd:MTH00054  172 AQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLggwl 251
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2033712556 249 NPGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTMLSGLPP 320
Cdd:MTH00054  252 VISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-307 3.05e-107

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 315.59  E-value: 3.05e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:PRK06076    6 PDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAP 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMPAT--LADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAV 158
Cdd:PRK06076   86 VIAFIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAV 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 159 IILTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMM 238
Cdd:PRK06076  166 VLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMIL 245
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2033712556 239 MNTLTCILFLN----PGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:PRK06076  246 VSALITTLFLGgwlpPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
1-320 5.93e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 284.99  E-value: 5.93e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556   1 MNQLLLYTVNPLLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTP 80
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  81 TLALFLALMIWTPLPMP--ATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAV 158
Cdd:MTH00029   83 IISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 159 IILTGGFTMQMLSTTQEHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMM 238
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 239 MNTLTCILFL-----------------NPGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLT 301
Cdd:MTH00029  243 MSCMMTIFFLggwlspldgiptppeafSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322
                         330
                  ....*....|....*....
gi 2033712556 302 LALFLWHITLPTMLSGLPP 320
Cdd:MTH00029  323 LGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
12-315 8.55e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 275.89  E-value: 8.55e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIW 91
Cdd:MTH00010   10 LLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLW 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  92 TPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQMLS 171
Cdd:MTH00010   90 SLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 172 TTQeHHWLLLPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFLN-- 249
Cdd:MTH00010  170 MSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfi 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2033712556 250 PGNTISPALftinLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLWHITLPTML 315
Cdd:MTH00010  249 PSIFISDLM----LILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
12-306 1.31e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 210.53  E-value: 1.31e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIW 91
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  92 TPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMqmls 171
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF---- 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 172 tTQEHHWLLLPTWplaMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFlnpg 251
Cdd:MTH00090  159 -VSSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF---- 230
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2033712556 252 ntispalFTINLMLKTTILTMMfLWTRASYPRFRYDQLMHLLWKNFLPLTLALFL 306
Cdd:MTH00090  231 -------FKFSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
18-306 2.96e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.56  E-value: 2.96e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  18 VLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLALFLALMIWTPLPMP 97
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  98 ATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQMLSTTQEHH 177
Cdd:MTH00058   94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLS 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 178 WLLLPtwPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLTCILFLNPGNTISPA 257
Cdd:MTH00058  174 VLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIML 251
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2033712556 258 LFTInlmlkttiltMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFL 306
Cdd:MTH00058  252 LFHL----------LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLF 290
ndhA CHL00032
NADH dehydrogenase subunit 1
12-302 6.22e-49

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 167.05  E-value: 6.22e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPISDGVKLFIKEPLRPSPSSPTLFILTPTLA---LFLAL 88
Cdd:CHL00032   34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvisILLSY 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  89 MIwTPLPMPATLADLNLGLLFMLALSSMAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGFTMQ 168
Cdd:CHL00032  114 LV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTV 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 169 MLSTTQEHHWLLlpTWPL------AMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTL 242
Cdd:CHL00032  193 DIVEAQSKYGFW--GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLF 270
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2033712556 243 TCILFLNPGNTISPALFTINLM--------LKTTI-------LTMMFLW----TRASYPRFRYDQLMHLLWKNFLPLTL 302
Cdd:CHL00032  271 VTVLYLGGWNLSIPYIFIPELFeinktggvFGTTIgifitlaKTYLFLFisitTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
12-307 6.70e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 117.98  E-value: 6.70e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  12 LLYIIPVLIAVAFLTLLERKVLGYMQLRKGPnivgpyGLLQPISDGVKLFIKEPLRPSPSSPtLFILTP------TLALF 85
Cdd:COG0650     8 LLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPyvalaaMLLAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556  86 LALMIWTPLPMPATLADLnLGLLFMLALSSMAvysILWSGWASNSKYPLIGALRAVAQTISYEVTLGIILLAVIILTGGF 165
Cdd:COG0650    81 LLVPVLTTGPPLSFSGDL-IVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGST 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2033712556 166 TM-QMLSTTQEHHWLLLP--TWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTL 242
Cdd:COG0650   157 SLsDIVAYQAAHGPLLLSpsLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSL 236
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2033712556 243 TCILFLNPGNTISPALFTINLMLKTTILTMMFLWTRASYPRFRYDQLMHLLWKNFLPLTLALFLW 307
Cdd:COG0650   237 FVNLFLPWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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