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Conserved domains on  [gi|2057220246|gb|QWX94053|]
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BST-2B [Myotis macropus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BST2 super family cl25063
Bone marrow stromal antigen 2;
37-81 5.36e-11

Bone marrow stromal antigen 2;


The actual alignment was detected with superfamily member pfam16716:

Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 54.75  E-value: 5.36e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2057220246  37 VATLMIALQKDKAGGCKQQELLQKLQEEIKTLNQKLQDKYSELEK 81
Cdd:pfam16716  47 VVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQQLQDALAEVER 91
 
Name Accession Description Interval E-value
BST2 pfam16716
Bone marrow stromal antigen 2;
37-81 5.36e-11

Bone marrow stromal antigen 2;


Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 54.75  E-value: 5.36e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2057220246  37 VATLMIALQKDKAGGCKQQELLQKLQEEIKTLNQKLQDKYSELEK 81
Cdd:pfam16716  47 VVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQQLQDALAEVER 91
PilN COG3166
Type IV pilus assembly protein PilN [Cell motility, Extracellular structures];
18-89 2.57e-04

Type IV pilus assembly protein PilN [Cell motility, Extracellular structures];


Pssm-ID: 442399 [Multi-domain]  Cd Length: 185  Bit Score: 38.79  E-value: 2.57e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2057220246  18 KKLRDRKLPVWVGILLFLLVATLMIA------LQKDKAggcKQQELLQKLQEEIKTLNQKLQdkysELEKLRKENEAL 89
Cdd:COG3166    11 EERRKRRKRRFLALLVLALLLALAVLflvylyLQGQIA---QQQARNAALQQEIAKLDKQIA----EIKELKKQKAEL 81
PRK11530 PRK11530
hypothetical protein; Provisional
 33-86 6.19e-04

hypothetical protein; Provisional


Pssm-ID: 236923  Cd Length: 183  Bit Score: 37.70  E-value: 6.19e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2057220246  33 LFLLVATLMIAlqkdkagGCKQQELLQKLQEEIKTLNQKLQDKYSELEKLRKEN 86
Cdd:PRK11530    8 LLLLGSLLLLA-------GCAQQSEVRQMHNSVSTLNQEMTQLTQQAVAIEQQN 54
 
Name Accession Description Interval E-value
BST2 pfam16716
Bone marrow stromal antigen 2;
37-81 5.36e-11

Bone marrow stromal antigen 2;


Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 54.75  E-value: 5.36e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2057220246  37 VATLMIALQKDKAGGCKQQELLQKLQEEIKTLNQKLQDKYSELEK 81
Cdd:pfam16716  47 VVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQQLQDALAEVER 91
PilN COG3166
Type IV pilus assembly protein PilN [Cell motility, Extracellular structures];
18-89 2.57e-04

Type IV pilus assembly protein PilN [Cell motility, Extracellular structures];


Pssm-ID: 442399 [Multi-domain]  Cd Length: 185  Bit Score: 38.79  E-value: 2.57e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2057220246  18 KKLRDRKLPVWVGILLFLLVATLMIA------LQKDKAggcKQQELLQKLQEEIKTLNQKLQdkysELEKLRKENEAL 89
Cdd:COG3166    11 EERRKRRKRRFLALLVLALLLALAVLflvylyLQGQIA---QQQARNAALQQEIAKLDKQIA----EIKELKKQKAEL 81
PRK11530 PRK11530
hypothetical protein; Provisional
 33-86 6.19e-04

hypothetical protein; Provisional


Pssm-ID: 236923  Cd Length: 183  Bit Score: 37.70  E-value: 6.19e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2057220246  33 LFLLVATLMIAlqkdkagGCKQQELLQKLQEEIKTLNQKLQDKYSELEKLRKEN 86
Cdd:PRK11530    8 LLLLGSLLLLA-------GCAQQSEVRQMHNSVSTLNQEMTQLTQQAVAIEQQN 54
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 31-89 1.09e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 37.44  E-value: 1.09e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2057220246  31 ILLFLLVATLMIALQKDKAGGCKQQelLQKLQEEIKTLNQKLQDKYSELEKLRKENEAL 89
Cdd:COG4942     4 LLLLALLLALAAAAQADAAAEAEAE--LEQLQQEIAELEKELAALKKEEKALLKQLAAL 60
CwlO1 COG3883
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...
 34-89 1.52e-03

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];


Pssm-ID: 443091 [Multi-domain]  Cd Length: 379  Bit Score: 37.12  E-value: 1.52e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2057220246  34 FLLVATLMIALQKDKAGGCKQQEL------LQKLQEEIKTLNQKLQDKYSELEKLRKENEAL 89
Cdd:COG3883     2 LALALAAPTPAFADPQIQAKQKELselqaeLEAAQAELDALQAELEELNEEYNELQAELEAL 63
CwlO1 COG3883
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...
 38-90 1.74e-03

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];


Pssm-ID: 443091 [Multi-domain]  Cd Length: 379  Bit Score: 36.73  E-value: 1.74e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2057220246  38 ATLMIALQKDKAGGCKQQELLQKLQEEIKTLNQKLQDKYSELEKLRKENEALV 90
Cdd:COG3883   132 ADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALL 184
She9_MDM33 pfam05546
She9 / Mdm33 family; Members of this family are mitochondrial inner membrane proteins with a ...
 53-89 3.05e-03

She9 / Mdm33 family; Members of this family are mitochondrial inner membrane proteins with a role in inner mitochondrial membrane organization and biogenesis.


Pssm-ID: 428516 [Multi-domain]  Cd Length: 198  Bit Score: 35.63  E-value: 3.05e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2057220246  53 KQQELLQKLQEEIKTLNQKLQD--KYSELEKLRKENEAL 89
Cdd:pfam05546   4 KLEFYLDSLQETIFTATRALNDvtGYSSIEKLKKSIEEL 42
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 56-89 6.89e-03

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 33.41  E-value: 6.89e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2057220246  56 ELLQKLQEEIKTLNQKLQDKYSEL----EKLRKENEAL 89
Cdd:COG3074    21 ELLQMEVEELKEKNEELEQENEELqsenEELQSENEQL 58
Cep57_CLD_2 pfam14197
Centrosome localization domain of PPC89; The N-terminal region of the fission yeast spindle ...
 58-89 7.77e-03

Centrosome localization domain of PPC89; The N-terminal region of the fission yeast spindle pole body protein PPC89 has low similarity to the human Cep57 protein. The CLD or centrosome localization domain of Cep57 and PPC89 is found at the N-terminus. This region localizes to the centrosome internally to gamma-tubulin, suggesting that it is either on both centrioles or on a centromatrix component. This N-terminal region can also multimerize with the N-terminus of other Cep57 molecules. The C-terminal part, Family Cep57_MT_bd, pfam06657, is the microtubule-binding region of Cep57 and PPC89.


Pssm-ID: 372959 [Multi-domain]  Cd Length: 67  Bit Score: 33.03  E-value: 7.77e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2057220246  58 LQKLQEEIKTLNQ-------KLQDKYSELEKLRKENEAL 89
Cdd:pfam14197  19 VAVHEIELKRLRRerdsavrQLGVAYLEIQELKAENEAL 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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