|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 728.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 81 QNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 161 LIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 241 YGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 321 LTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2070135702 401 LLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLISG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 612.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 81 QNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 161 LIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 241 YGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 321 LTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 401 LLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLISGV 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 596.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 81 QNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 161 LIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 241 YGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 321 LTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2070135702 401 LLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLISG 456
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
3.31e-176 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 501.41 E-value: 3.31e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWLVPTYYPSKTTT-LWTSIDQISSPLLVLSCWLLPLMVLA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLnLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 80 SQNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 160 LLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 240 GYGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 320 GLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 400 ILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.71e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 476.35 E-value: 1.71e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 3 KIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWL-VPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 82 NHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 162 IAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLmssLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTWNNNLWW---LACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 242 GIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 322 TSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAIL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2070135702 402 LTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.05e-145 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 424.00 E-value: 1.05e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLqWLVPTYYPSKTTTLWTS--IDQISSPLLVLSCWLLPLMVL 78
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSL-FLLNNHWSSSWHNLSLSlaTDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 79 ASQNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSL 158
Cdd:MTH00044 80 ASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 159 PLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 239 GGYGIMRITLLIN-PSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMI 317
Cdd:MTH00044 240 GGYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 318 SHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2070135702 398 AAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLIS 455
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
2.64e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 366.02 E-value: 2.64e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLspcKHLWTNITAHSLLIATISLQWLVPTYYPSKTTtLWTSIDQISSPLLVLSCWLLPLMVLAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL---KNSWWLVQSLLFLLSFLFMLLFSLSFYFSNIS-YFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 81 QNHLEQEPTIRKRVFTVTMVLAqpSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 161 LIAIIHLHNQIGTLYLPMLKLShptissSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 241 YGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 321 LTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2070135702 401 LLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-457 |
4.41e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 346.83 E-value: 4.41e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 55 WTSIDQISSPLLVLSCWLLPLMVLASQNHLEQEPTIRKRVFTVTMVLAqpSILLAFSASELMLFYIAFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 135 RWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHptiSSSWSGLMSSLALLMAFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLR---KLLSSMGLWGLLVFLAFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 295 GLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTIN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 375 LMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
...
gi 2070135702 455 SGV 457
Cdd:MTH00150 414 FMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.53e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 335.56 E-value: 3.53e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPcKHLWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 81 QN--HLEQEPtirkRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSL 158
Cdd:MTH00014 80 FKifQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 159 PLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLmssLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWW---LITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 239 GGYGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIS 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 319 HGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGA 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 399 AILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLIS 455
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
2.97e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 325.40 E-value: 2.97e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQNHLEQEPTIRKRVFTVTMVLAqpSILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLL--ILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLylpMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL---SMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 297 VVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070135702 377 AELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-457 |
1.34e-75 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 244.61 E-value: 1.34e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQNHLEQeptiRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 138 NqPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSsLALLMAFMVKAPLYGLHLWLP 217
Cdd:COG1008 156 G-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLF-LAFFIAFAVKVPMFPFHTWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPS-TNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGL 296
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 297 VVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLM 376
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 377 AELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLISG 456
Cdd:COG1008 394 GEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLD 473
|
.
gi 2070135702 457 V 457
Cdd:COG1008 474 L 474
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-397 |
3.07e-75 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 237.60 E-value: 3.07e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 112 ASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 192 GLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 272 TSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLARGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2070135702 351 LLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTG 397
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
58-449 |
2.48e-66 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 220.84 E-value: 2.48e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQNhleqepTIRKRV-FTVTMVLAQPSILL-AFSASELMLFYIAFEATLIPTLILITR 135
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWE------EIKKRVkFYMAALLWLEGGVIgVFAALDLLLFYVFFEAMLIPMYFLIGV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 136 WGnQPERLNAGIYLLFYTLASSLPLLIAIIHL----HNQIGTLYLPMLklsHPTISSSWSGLMSSLALLMAFMVKAPLYG 211
Cdd:PRK05846 154 WG-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADL---LNLPLPPGVQYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINP-STNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSS 290
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 291 VSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALP 370
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070135702 371 PTINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMAlhmiPMVLLIL 449
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVALLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-457 |
1.52e-64 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 215.57 E-value: 1.52e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQnhleqePTIRKRV--FTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILIT 134
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASW------ESIQKRVkeFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 135 RWGNqPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIG--TLYLPMLKLSHPTisssWSGLMSSLALLMAFMVKAPLYGL 212
Cdd:TIGR01972 148 VWGG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtFDLLELLNLPLPF----GVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFI-TLALWGALMTSAICLRQVDLKSLIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 292 SHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 372 TINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLP-SHITSIQNSSTREHLLMALHMIPMVLLILK 450
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLY 462
|
....*..
gi 2070135702 451 PDLISGV 457
Cdd:TIGR01972 463 PNPLLDL 469
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-454 |
4.56e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 203.76 E-value: 4.56e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 23 LWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLASQNHLeqepTIRKRVFTVTMVLA 102
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSI----KFLFKEFLLCLLFL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 103 QPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTL-YLPMLKL 181
Cdd:MTH00204 122 EVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 182 SHPtissSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPF 261
Cdd:MTH00204 202 KLP----LSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 262 ITL-----ALWGALMTSaiclRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:MTH00204 278 IVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 337 THSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQR 416
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISF 433
|
410 420 430
....*....|....*....|....*....|....*...
gi 2070135702 417 GPLPSHITSIQNSSTREHLLMALHMIPMVLLILKPDLI 454
Cdd:MTH00204 434 GGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-438 |
2.79e-56 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 194.37 E-value: 2.79e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQNHLEqeptIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTL-YLPMLKLSHptISSSWSGLMSSLALLMAFMVKAPLYGLHLW 215
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSH--VVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINP-STNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 295 GLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2070135702 375 LMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQNSSTREHLLMA 438
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITA 476
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
14-410 |
8.57e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 189.88 E-value: 8.57e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 14 LTLLSPCKHLWTNITAHSLLIATISLQWlVPTYYPSKTTTLWtSIDQISSPLLVLSCWLLPLMVLASQNhleqepTIRKR 93
Cdd:MTH00217 36 LLTLTATILLWASFDGEGQFQAIKKFEW-IPGIEPVFGPVVF-AVDGISIFFLILTALLTPICILISWN------SIKFL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 94 VFTVTMVLAQPSILL--AFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQI 171
Cdd:MTH00217 108 IKEFLLCLLVIEILLmgVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 172 GTL---YLPMLKLSHptisssWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITL 248
Cdd:MTH00217 188 GTTdyqALCCLKIEK------ELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSW 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 249 LINPSTNNLHYPFI-TLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLF 327
Cdd:MTH00217 262 PLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALF 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 328 CLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAILLTASYT 407
Cdd:MTH00217 342 IAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYS 421
|
...
gi 2070135702 408 LYM 410
Cdd:MTH00217 422 IYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-412 |
2.67e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.38 E-value: 2.67e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 106 ILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHlHNQIGTLYLPMLKLShpt 185
Cdd:MTH00094 75 CLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK-NFFFFSLCYFDFFLS--- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 186 issswsgLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLhypFITLA 265
Cdd:MTH00094 151 -------WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIFS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 266 LWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLA 345
Cdd:MTH00094 221 LLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFM 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 346 RGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLT 412
Cdd:MTH00094 301 NSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
1.61e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 157.12 E-value: 1.61e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQNhLEQEPtirkRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQpERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSsLALLMAFMVKAPLYGLHLWL 216
Cdd:PRK12561 131 GGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALELLLY-AGFLIAFGVKLPIFPLHTWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYP-FITLA----LWGALMTSAiclrQVDLKSLIAYSSV 291
Cdd:PRK12561 209 PDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGvvniIYGALNAFA----QDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 292 SHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPP 371
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPG 364
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2070135702 372 TINLMAELTIIIALFN---WSNP----TLILTGAAILLTASYTLYML 411
Cdd:PRK12561 365 MSGFVSELTVFLGITSsdvYSSTfrtiTILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-409 |
2.95e-40 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 149.53 E-value: 2.95e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQNHLEQEPtiRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 138 NQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLmAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLV-GFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPS--TNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 296 LVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|....
gi 2070135702 376 MAELTIIIALFNWSNPTLIltgAAILLTASYTLY 409
Cdd:COG0651 390 VSKWLLLQAALEAGAWLLA---AVLLLSSLLTLA 420
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-455 |
3.15e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 137.15 E-value: 3.15e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 59 DQISSPLLVLSCWLLPLMVLASQnhleqEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGN 138
Cdd:PRK02546 86 DGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 139 QpERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSlALLMAFMVKAPLYGLHLWLPK 218
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYA-GLLIAYGVKLPIVPLHTWLPD 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 219 AHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYP-FITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLV 297
Cdd:PRK02546 239 AHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFV 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 298 VAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMA 377
Cdd:PRK02546 319 LIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 378 ELTIIIALFNWSNPTL-------ILTGAAILLTASYTLYMLTMTQRGPLPSHITSIQN---SSTREHLLMALHMIPMVLL 447
Cdd:PRK02546 399 ELMVFVGFATSDAYTLpfrvvvvFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKlvdAEPREVFIIACLLVPIIGI 478
|
....*...
gi 2070135702 448 ILKPDLIS 455
Cdd:PRK02546 479 GLYPKLVT 486
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
6.51e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 127.51 E-value: 6.51e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQNHLEqeptiRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQpERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGT---LYLPMLKLSHPtissSWSGLMSSLALLMAFMVKAPLYGLH 213
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGAssfDYEPLRSHTLP----LSTQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFI-TLALWGALMTSAICLRQVDLKSLIAYSSVS 292
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 293 HMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGL---QPLLPLMATWWLLANLANMAL 369
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 370 PPTINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSHITSI 426
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
58-422 |
4.42e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 122.13 E-value: 4.42e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQNHLEqeptiRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK07363 77 VDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 138 NQpERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLaLLMAFMVKAPLYGLHLWLP 217
Cdd:PRK07363 152 GE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTG-LLLGFGIKIPLVPLHTWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPfiTLALWGA---LMTSAICLRQVDLKSLIAYSSVSHM 294
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGHM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 295 GLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGL-QPL--LPLMATWWLLANLANMALPP 371
Cdd:PRK07363 308 GYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIPG 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2070135702 372 TINLMAELTIIIALFNWSNPTLILTGAAILLTASYTLYMLTMTQRGPLPSH 422
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
58-411 |
2.40e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 120.05 E-value: 2.40e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQnhleqePTIRK-RVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRW 136
Cdd:CHL00011 82 IDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQpERLNAGIYLLFYTLASSLPLLIAIIHL---HNQIGTLYLPML-KLSHPtissSWSGLMSSLALLMAFMVKAPLYGL 212
Cdd:CHL00011 156 GGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLaNQSYP----VALEILFYIGFLIAYAVKLPIIPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFitLALWGALM---TSAICLRQVDLKSLIAYS 289
Cdd:CHL00011 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW--LVIVGAIQiiyAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 290 SVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMAL 369
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLAL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2070135702 370 PPTINLMAELTI---IIALFNWSNPTLIL----TGAAILLTASYTLYML 411
Cdd:CHL00011 389 PGMSGFVAELIVffgIITSQKYLLMPKILitfvMAIGMILTPIYLLSML 437
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-449 |
2.76e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.36 E-value: 2.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 58 IDQISSPLLVLSCWLLPLMVLASQNHLEQEPTIRkrVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 138 NQPERLNAGI-YLLFYTLASSLpLLIAIIHLHNQIGTLYLPMLKL---------SHPTISSSWSGLMSSLAL-LMAFMVK 206
Cdd:PRK12667 158 DRGDAVEAAIkYALIGAVGTTL-YFLALAFLYATFGTLNMADLSAkirglsfplTGGLAGNPPLALGVALALaLWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 207 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLI-------NPSTNNLHYPFITLALWGALMTSAICLRQ 279
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgispslIDFRAALSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 280 VDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWW 359
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 360 LLANLANMALPPTINLMAELTIIIALFNWSNPTL---ILTGAAILLTASYTLYMLTMTQRGPlpshitSIQNSSTREHLL 436
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPalvLLIASAISLVGYFRAWYSLFFGKPK------SGEEVEHKESPS 470
|
410
....*....|...
gi 2070135702 437 MALHMIPMVLLIL 449
Cdd:PRK12667 471 MSVVILVLALAVL 483
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.41e-22 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 92.20 E-value: 1.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 1 MLKIIIPTIMLLPLTLLSPCKHLWTNITAHSLLIATISLQWL-VPTYYPSKTTTLWTSIDQISSPLLVLSCWLLPLMVLA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2070135702 80 SQNHLEQEPTIRKRVFTVTMVLAQPSILLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-449 |
1.38e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 96.87 E-value: 1.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 109 AFSASELMLFYIAFEATLIPTLILITRWGNqPERLNAG-IYLLFYTLASSLpLLIAIIHLHNQIGTLYLPMLklshPTIS 187
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAArKYLIVGLIGSTF-LLIGVGLLYGVTGTLNMADL----AGAL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 188 SSWSGLMSSLALLM-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLI----NPSTNNLHYPFI 262
Cdd:PRK08375 196 AENPTVVTAFGFVLlALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLA 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 263 TLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRIL 342
Cdd:PRK08375 276 VLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRL 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 343 LLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFN-WSNPTLILTGAAILLTASYTLYMLTMTQRGPLPS 421
Cdd:PRK08375 356 SELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
330 340
....*....|....*....|....*...
gi 2070135702 422 HITSIQnssTREHLLMalhMIPMVLLIL 449
Cdd:PRK08375 436 GSEAPK---QEAPLGM---LAPSLALAL 457
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-406 |
1.77e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 78.46 E-value: 1.77e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 91 RKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITrWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQ 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 171 IGTLYLPMLKLSHPTIssswsglmssLALL-MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLL 249
Cdd:PRK07234 171 NGTFAFSGLATADPEA----------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 250 InpstNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIqtqwaisgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 241 V----PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2070135702 330 ANTNYERTHSRILLLARGLQPLLPLmatwwLLANLANMALPPTINLMAELTIIIALFNWSnpTLILTGAAILLTASY 406
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQ--AIALNLAAVGTAASF 378
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-387 |
1.46e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 75.74 E-value: 1.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 199 LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLI--NPSTNNLHYPFITLALWGALMTSAIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 277 LRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMA 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190
....*....|....*....|....*....|.
gi 2070135702 357 TWWLLANLANMALPPTINLMAELTIIIALFN 387
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-408 |
1.67e-14 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 76.23 E-value: 1.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 95 FTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPErlNAGIYLLFYTLASSLPLLIAIIHLHNQIGTL 174
Cdd:PRK12650 112 FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 175 YLPmlKLSHPTISSSWSGLMSSLALLMAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINp 252
Cdd:PRK12650 190 SLS--GILHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 253 STNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANT 332
Cdd:PRK12650 267 DVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGV 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 333 NYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIAL----FNWSNPTLILTGAAI--LLTASY 406
Cdd:PRK12650 347 VDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFleapGGNAGVVLLLVGAALgaVFTFAY 426
|
..
gi 2070135702 407 TL 408
Cdd:PRK12650 427 SA 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
105-401 |
2.78e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 75.34 E-value: 2.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 105 SILLAFSAS--------ELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYL 176
Cdd:PRK12647 99 SYILLFMASmlglvlsdNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 177 PMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRItlliNPSTN 255
Cdd:PRK12647 179 SELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARL----NPVLG 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 256 NLHYPFITLALWGA---LMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANT 332
Cdd:PRK12647 254 GTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGI 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070135702 333 NYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAIL 401
Cdd:PRK12647 334 IDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
107-423 |
3.54e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 74.80 E-value: 3.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 107 LLAFSASELML--------FYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPM 178
Cdd:COG1009 117 LLLFMAAMLGLvlsdnlllLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 179 LKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITLLIN 251
Cdd:COG1009 197 LLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhAATMVKA------GVYLLARLSPLFA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 252 PSTNnLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQtqwAISGAMILMISHGLTSSMLFCLAN 331
Cdd:COG1009 270 LSPV-WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAG 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 332 TNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAIL---LTASYTL 408
Cdd:COG1009 346 SVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSF 425
|
330
....*....|....*....
gi 2070135702 409 YMLTMT----QRGPLPSHI 423
Cdd:COG1009 426 RLFFLVffgkPRPKTPKHP 444
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-386 |
4.11e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.38 E-value: 4.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 57 SIDQISSPLLVLSCWLLPLMVLASQNHLEQ-EPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITR 135
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 136 WGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWsglmssLALLMAFMVKAPLYGLHLW 215
Cdd:PRK08667 154 DYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRItlLINPSTNNLHYPFITLAL--WGALMTSAICLRQVDLKSLIAYSSVSH 293
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 294 MGLV-----------VAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLA 362
Cdd:PRK08667 306 IGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|....
gi 2070135702 363 NLANMALPPTINLMAELTIIIALF 386
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-409 |
3.27e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.54 E-value: 3.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 59 DQISSPLLVLSCW-LLPLMVLA-SQNHLEQEPTIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRw 136
Cdd:PRK12665 75 DRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLaLLMAFMVKAPLYGLHLWL 216
Cdd:PRK12665 154 GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAV-LLVAFGIKAAVFPLSFWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPstnnlHYPFITLALWGALMTSAI----CLRQVDLKSLIAYSSVS 292
Cdd:PRK12665 233 PDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 293 HMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPT 372
Cdd:PRK12665 308 HIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPF 387
|
330 340 350
....*....|....*....|....*....|....*...
gi 2070135702 373 INLMAELTIIIA-LFNWSNPTLILTGAAIlLTASYTLY 409
Cdd:PRK12665 388 SGFIGKVALLEAgAEDGTWLAWALVAGGV-VTSLLTLY 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
148-449 |
1.44e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.41 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 148 YLLFYTLASSLpLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLaLLMAFMVKAPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK08377 163 YIVLGGIGSSF-FLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLAL-LIFGLAVEAELFPLNAWAPDAYQAAPHPI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 228 SMLLAALLLKLGGYGIMRI--TLLINPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQT 305
Cdd:PRK08377 241 TVMFSAFVVKAGLYAMARIlyLMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 306 QWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIAL 385
Cdd:PRK08377 321 QAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAG 400
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2070135702 386 FN--WSNPTLILTGAAILLTASYTLYMLTMTQRGplpshitsiQNSSTREHLLMALHMIPMVLLIL 449
Cdd:PRK08377 401 LSagYTWPVALVLGASVVEAVYYFRLIHTMWFKG---------EGERIRENAAIGIILLLLAALIV 457
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-385 |
1.56e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.40 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 93 RVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWgNQPERLNAGIYLLFYTLASSLPLLIAIIHL----H 168
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLfsltR 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 169 NQIGTLYLPMLKL-SHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT 247
Cdd:PRK08676 181 QALGTGTLNWTELaAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 248 LLINPSTNNLHYPFITLALwGALMTSAIC---LRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSS 324
Cdd:PRK08676 261 ALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKS 339
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2070135702 325 MLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIAL 385
Cdd:PRK08676 340 GLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-387 |
7.57e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.87 E-value: 7.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 105 SILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYlpmlkLSHP 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 185 TISSSWSGLMSSLALLMaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITL 264
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 265 ALWGALMTSaicLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:MTH00062 237 FSVFFLITA---CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2070135702 345 ARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFN 387
Cdd:MTH00062 314 LKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-448 |
7.73e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 67.47 E-value: 7.73e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 95 FTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 175 YLPMLKLSHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITLLINPS 253
Cdd:PRK12646 192 NITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGLS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 254 tNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMI------QTQWAIS--------GAMILMISH 319
Cdd:PRK12646 271 -NMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 320 GLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLAnMALPPTIN--LMAEL-------TIIIALFNWSN 390
Cdd:PRK12646 350 AIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMfldaltqTGQLSQFSLIS 428
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 391 PTLILTGAAI--LLTASYTLYMLTMTQRGPLpsHITSIQNSSTREHLLMALHMIPMVLLI 448
Cdd:PRK12646 429 MIIIVFIGVIasIFTFTYALYMVKEVFWGKY--DSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-413 |
1.38e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 66.27 E-value: 1.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 118 FYIAFEATLIPTLILITRWGNQPERLNAGI-YLLFYTLASSLpLLIAIIHLHNQIGTlyLPMLKLSHPTISSSWSGLMSS 196
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSM-VLLGIALLYGQYGT--LNMAYLAVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 197 LALLMA-FMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRITL-LINPSTNNLHYPF--ITLALWGALMT 272
Cdd:PRK08376 223 LALFIAgLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFsIYGPAINLATVGWviIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 273 SAICLRQVDLKSLIAYSSVSHMG---------LVVAATMIQTQW---AISGAMILMISHGLTSSMLFCLANTNYERTHSR 340
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYgeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070135702 341 ILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWsNPTL--ILTGAAILLTASYTLYMLTM 413
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALF-NPILgvIAMIGSVLTLASFVKVFHTA 455
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-402 |
6.13e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 6.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 95 FTVTMVLAqpsILLAFSaSELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTL 174
Cdd:PRK06589 122 FNLTILIG---VLIALS-SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 175 YLPMLKLshptisSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPST 254
Cdd:PRK06589 198 DFVSGGL------FSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 255 N-----NLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCL 329
Cdd:PRK06589 272 YlqrifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYS 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070135702 330 ANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNP------TLILTGAAILL 402
Cdd:PRK06589 352 MGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlsiivMLVVIASSILS 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-409 |
6.55e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.20 E-value: 6.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 109 AFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLpLLIAIIHLHNQIGTLYLPML--KLSHPTI 186
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTLNMADIsvKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 187 SSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TLLINPSTNNLHYPFITLA 265
Cdd:PRK07691 203 GQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 266 LWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLA 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2070135702 346 RGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNptlILTGAAILLTASYTLY 409
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGF---YVSGIIVLLSSLLVLY 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
9.44e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.86 E-value: 9.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 110 FSASELMLFYIAFEATLIPTLILITRwGNQPERLNAGIYLLFYTLASSLpLLIAIIHLHNQIGTLYLP-----MLKLSHP 184
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFAdisqgLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 185 TISSSWSglmssLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMrITLLINPST---------- 254
Cdd:PRK08668 193 GFALIVF-----LFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTklfsefgtyr 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070135702 255 --NNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLF 327
Cdd:PRK08668 267 gvPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-454 |
2.19e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 59.19 E-value: 2.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 95 FTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGI-YLLFYTLASSLpLLIAIIHLHNQIGT 173
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 174 LYLPMLKLSHPTISSSWSGLMSSLAL-LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINP 252
Cdd:TIGR01770 183 LNFEDLLLFLSNGMLNISLLLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 253 S-TNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTS----SMLF 327
Cdd:TIGR01770 263 GfSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 328 CLANTNYERTHSriLLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNwsNPTLILTGAAILLTASYT 407
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK--SGLYWLAVIAVLTSVIGA 418
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2070135702 408 LYML----TMTQRGPLPSHITSIQNSStrEHLLMALHMIPMVLLILKPDLI 454
Cdd:TIGR01770 419 FYYLrvvkVMYFDKPERRIPSNPQSKA--QSLLLSISALFILFLGLFPSLI 467
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-412 |
8.44e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.65 E-value: 8.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 109 AFSASELMLFYIAFEATLIPTLILITrWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISS 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 189 SWSGLMSSLALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITLALWG 268
Cdd:PRK12663 203 TATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 269 ALMTSAI-CLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARG 347
Cdd:PRK12663 282 TMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070135702 348 LQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLIltgAAILLTASYTLYMLT 412
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILL---ALMLITSLITMYSLF 423
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
112-402 |
1.89e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 56.52 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 112 ASELMLFYIAFEATLIPTLILITRWGNqPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTissswS 191
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-----L 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 192 GLMSSLALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITLLINPSTNNLHYPFITL 264
Cdd:PRK06525 206 KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYVGAVM 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 265 ALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQ---TQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRL 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2070135702 342 LLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILTGAAILL 402
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-384 |
2.98e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.90 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 119 YIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLpLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATF-YLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 199 LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--------LLINPSTNNLhypFITLALWGAL 270
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV---FMILAALAIV 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 271 MTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANT---NYERTHSRILLlarG 347
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---N 368
|
250 260 270
....*....|....*....|....*....|....*..
gi 2070135702 348 LQPLLPLMATWWLLANLANMALPPTINLMAELTIIIA 384
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-371 |
1.00e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.51 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 94 VFTVTMVLaqpsILLAFSAselMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGT 173
Cdd:PRK06521 121 LFLASMVL----VLLADDA---FSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 174 LYLPMLKLSHPTissswsGLMSSLALLMAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITL-L 249
Cdd:PRK06521 194 YDFAAMRAAHLS------PFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 250 INPSTNNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAA---TMI--------QTQWAISGAMILMIS 318
Cdd:PRK06521 268 LGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLN 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2070135702 319 HGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLANLANMALPP 371
Cdd:PRK06521 348 HALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
8.18e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 8.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 137 GNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPTISSSWSGLMSSLA--LLMAFMVKAPLYGLHL 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAGAalLLVVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 215 WLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITLLI-NPSTNNLHYPFITLALWGALMTSAI----CLRQVDLKSLIA 287
Cdd:PRK12666 232 WLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLAA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2070135702 288 YSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-404 |
2.25e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 49.73 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 9 IMLLPLTLLSPCKHLWTNITAHSLLIATISLQWLVPTYYPSKTTTLWTsIDQISSPLLVLSCWLLPLMVLASQNHLEQEP 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 89 tIRKRVFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGI-YLLFYTLASSLpLLIAIIHL 167
Cdd:COG1007 99 -LLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 168 HNQIGTLYLPMLKLSHPTISSSWSGLMSSLALLMA-FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI 246
Cdd:COG1007 177 YGATGSLNLAGIAAALAAGGANSPLLLLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 247 TLLINPS-TNNLHYPFITLA----LWGALMTsaicLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGL 321
Cdd:COG1007 257 LVEAFPGlAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLF 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 322 TS----SMLFCLANTNYERTHSRILllaRGL---QPLLPLMATWWLLAnlanMA-LPPTINLMAELTIIIALfnWSNPTL 393
Cdd:COG1007 333 MNlgafAVILLLSRKGGEAEEIEDL---AGLarrSPLLALAMTIFLLS----LAgIPPTAGFFGKFYVFSAA--VEAGLY 403
|
410
....*....|.
gi 2070135702 394 ILTGAAILLTA 404
Cdd:COG1007 404 WLAVIAVLNSV 414
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
256-371 |
1.08e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.72 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 256 NLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 2070135702 336 RTHSRILLLARGLQPLLPLMATWWLLANLANMALPP 371
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-411 |
2.11e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 47.23 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 107 LLAFS--------ASELMLFYIAFEATLIPTLILItrwGNQPERLN---AGIYLLFYTLASSLPLLIAIIHLHNQIGTLY 175
Cdd:PRK12644 112 LVAFAgamfglvtSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 176 LPMLKLSHPTisssWSGLMSSLALLMAFMV-KAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRIT 247
Cdd:PRK12644 189 LSELLADPPT----GPAVSVAVVLILVGALsKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 248 llinPSTNNL---HYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSS 324
Cdd:PRK12644 258 ----PGFADVpvwRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 325 MLFCLANTNYERTHSRILLLARGLQPLLPLMATWWLLAnLANMA-LPPTINLMAELTIIIALFNWSNP----TLILTGAA 399
Cdd:PRK12644 334 ALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALA-AASMAgLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIV 412
|
330
....*....|....
gi 2070135702 400 I--LLTASYTLYML 411
Cdd:PRK12644 413 LgsILTVAYSLRFL 426
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-429 |
1.18e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 44.63 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 197 LALLMAFMV------KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITLLINpstnnlHYPFI--TLALW 267
Cdd:PRK07376 225 LALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGvFLVARMYPVFE------QFPAVmtVIAWT 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 268 GAL---MTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQtqwAISGAMILMISHGLTSSMLFCLANT---------NYE 335
Cdd:PRK07376 298 GAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYSAGLFHLMTHAYFKAMLFLGSGSvihgmeevvGHD 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 336 RTHSRILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNwSNPTLILTGAAIL-LTASYTLYMLTMT 414
Cdd:PRK07376 375 PVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTAFYMFRMYFLT 453
|
250
....*....|....*
gi 2070135702 415 QRGPLPSHITSIQNS 429
Cdd:PRK07376 454 FEGEFRGNDKELQKE 468
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-327 |
1.55e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.12 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 112 ASELMLFYIAFEATLIPTLILItrWGN-QPERLNAGI-YLLFYTLASSLpLLIAIIHLHNQIGTLYLpmlklshpTISSS 189
Cdd:PRK12668 112 AGDLLTLFVFWELMAFTSTFLV--WARgTKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAF--------GAIAG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 190 WSGLMSSLALLmAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITllinPSTNNLHYPFITLALWGA 269
Cdd:PRK12668 181 LGGTAAWLILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGV 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2070135702 270 LMTsaicLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLF 327
Cdd:PRK12668 256 FFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-371 |
3.71e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 106 ILLAFSASELMLFyIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLKLSHPT 185
Cdd:PRK12649 125 IGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSEL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 186 ISSSWSGLMSSLALLMAFM---VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRitllINPSTNNLHYPF 261
Cdd:PRK12649 204 IENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVAR----IHPIFSGTEAWF 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 262 ITLALWG---ALMTSAICLRQVDLKSLIAYSSVSHMGLVVA----ATMIQTQWAISGAMILMISHGLTSSMLFCLANTNY 334
Cdd:PRK12649 279 ILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVA 358
|
250 260 270
....*....|....*....|....*....|....*..
gi 2070135702 335 ERTHSRILLLARGLQPLLPLMATWWLLANLANMALPP 371
Cdd:PRK12649 359 HEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-370 |
4.75e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 59 DQISSPLLVLSCWLLPLMVLASQNHLEQEPTIRKrvFTVTMVLAQPSILLAFSASELMLFYIAFEATLIPTLILITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 139 QPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLK--------------LSHPTISSSWSGLMSSLALLMAFM 204
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyyGGGAYESPLAPFAIIGILLLIGCI 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 205 VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRITLlinPSTNNLHYPFITLALWGAL---MTSAICLRQVD 281
Cdd:MTH00032 237 GKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF---PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 282 LKSLIAYSSVSHMGLVVAATMIQTQWAISgaMILMISHGLTSSMLFCLA-----NTNYERTHSRILllaRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330
....*....|....
gi 2070135702 357 TWWLLANLANMALP 370
Cdd:MTH00032 388 TMMLIGSFSIMGLP 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
5.76e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.12 E-value: 5.76e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2070135702 277 LRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
106-449 |
7.71e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.99 E-value: 7.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 106 ILLAFSASELMLFyIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIHLHNQIGTLYLPMLkLSHPT 185
Cdd:MTH00020 125 VVLVTSDNYLQLF-IGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV-FNMVV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 186 ISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGygimrITLLINPSTNNLHYPFITLA 265
Cdd:MTH00020 203 SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAG-----VFLLIRSSPLFEQAPLALII 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 266 L-----WGALMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIqTQWAISgaMILMISHGLTSSMLFCLANtnyerthSR 340
Cdd:MTH00020 277 VtivgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAG-------SV 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 341 ILLLAR--------GLQPLLPLMATWWLLANLANMALPPTINLMA-ELTIIIALF-NWSNPTLILTGAAILLTASYTLYM 410
Cdd:MTH00020 347 IHALSDeqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWLGCFSALLTAFYSIRL 426
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2070135702 411 LtmtqrgplpsHITSIQNSSTREHLLMALH------MIPMVLLIL 449
Cdd:MTH00020 427 I----------YLTFLSNTNLKKAVFFHLHegdwnlLLPLGILAL 461
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-396 |
1.40e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 200 LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLLINPSTNNLHYPFITLALWGALMTSAICLRQ 279
Cdd:PRK08042 187 VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALME 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 280 VDLKSLIAYSSVSHMGLVV-----AATMIQTQ------WAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGL 348
Cdd:PRK08042 267 HNIQRLLAYHTLENIGIILlglgaGVTGIALEqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGI 346
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2070135702 349 QPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILT 396
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVA 394
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
197-371 |
2.51e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 40.28 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 197 LALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRIT--LLINPSTNNLhypFITLALWGALMTSA 274
Cdd:PRK07390 225 LALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvLALSPVALTV---LIVIGTVTAIGASL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 275 ICLRQVDLKSLIAYSSVSHMGLVVAAtmIQTQWAISgAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQPLLPL 354
Cdd:PRK07390 301 VAIAQIDIKRALSYSTSAYLGLVFIA--VGLQQPDI-ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPA 377
|
170
....*....|....*..
gi 2070135702 355 MATWWLLANLANMALPP 371
Cdd:PRK07390 378 TTLAFLVGSAGLVALLP 394
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
105-387 |
5.16e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.86 E-value: 5.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 105 SILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGI-YLLFYTLASSLpLLIAIIHLHNQIGTLYLPM--LKL 181
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGL-FLFGCALLCGTTGGLHLSYinLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 182 SHPTISSSWSGLMSSLALLMAFMVKAPLYGLHLWLPKAHVEAPiagsMLLAALLLKLGGYGIMRITLLINPSTNNLHYPF 261
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 262 ITLALWGALMTsaicLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLA---NTNYErth 338
Cdd:MTH00196 160 LFSLFVGAIGA----LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN--- 232
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2070135702 339 srILLLARGLQPLLPLMATWWLLANLANMALPPTINLMAELTIIIALFN 387
Cdd:MTH00196 233 --LIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVV 279
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
270-374 |
6.73e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 270 LMTSAICLRQVDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMISHGLTSSMLFCLANTNYERTHSRILLLARGLQ 349
Cdd:PRK12648 283 LLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLR 362
|
90 100
....*....|....*....|....*
gi 2070135702 350 PLLPLMATWWLLANLAnMALPPTIN 374
Cdd:PRK12648 363 RLMPITATLAMVAAAA-MAGVPLLN 386
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
95-396 |
8.68e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.22 E-value: 8.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 95 FTVTMVLaqpSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAIIhlhnqigtL 174
Cdd:MTH00011 11 FSSTMTL---GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM--------M 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 175 YLPMLKLSHPTissswsglmsSLALLMAFMVKAPLYGLHLWLPKahveapIAGSMLLAALLLKLGGYGIMRITLLINPST 254
Cdd:MTH00011 80 WSFPSLLKNIT----------ALMLLVSLMLKLGMAPCHFWFPS------VMSSISWTLCLILSTWQKIAPLSILFFFTS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070135702 255 NNLHYPFITLALWGALMTSAICLRQVDLKSLIAYSSVSHMGLVvaaTMIQTQWAISGAMILMISHGLTSSMLFCLANTNY 334
Cdd:MTH00011 144 HNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTPLMLLFAYLNA 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070135702 335 ERTHSRILLLARGlqpllPLMATWWLLANLANMALPPTINLMAELTIIIALFNWSNPTLILT 396
Cdd:MTH00011 221 FSTKFNSKISSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| |
