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Conserved domains on  [gi|2070674818|gb|QXT60044|]
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ATP synthase membrane subunit 6 (mitochondrion) [Stegophylla quercifoliae]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-217 1.90e-65

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 201.55  E-value: 1.90e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTiYNFQINWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSpTFLFISLFMF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGS-TLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  81 ILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070674818 161 RLSANMIAGHLLMTLLNNN------KLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTgpslssMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-217 1.90e-65

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 201.55  E-value: 1.90e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTiYNFQINWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSpTFLFISLFMF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGS-TLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  81 ILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070674818 161 RLSANMIAGHLLMTLLNNN------KLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTgpslssMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-216 2.87e-35

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 122.12  E-value: 2.87e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  73 LFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIF 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 153 IRPFSLSIRLSANMIAGHLLMTLLNN------NKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSS 216
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGlvpsllSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-217 1.98e-34

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 122.31  E-value: 1.98e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   5 LFNIFDPSTTIYNFQINWISSMIIITLM-----PNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFiSLFM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIflissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  80 FILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLS 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070674818 160 IRLSANMIAGHLLMTLLNN-------NKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGllfslmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_A pfam00119
ATP synthase A chain;
22-216 1.17e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.40  E-value: 1.17e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  22 WISSMIIITLMPNLMW----IIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFISLFMFILFNNFISLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  95 SSSSHMTFSMSLAIPFWMFFIMMSTFKN-TKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2070674818 174 TLL---------NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSS 216
Cdd:pfam00119 165 LLLaglifallsAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-214 4.85e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.36  E-value: 4.85e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  38 IIPNRIKWMMNKMLNFLNNEMKMLFKlKKIKSPTFLFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMM 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIG-KKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 118 STFKN-TKNMIAHLIpLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANMIAGHLLMTLL----NNNKLMIIILLIQMFM 192
Cdd:COG0356   105 GIKKKgLGGYLKHLF-FPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLaglaPFLLLGVLSLLLPVAW 183

                         170       180
                  ....*....|....*....|..
gi 2070674818 193 MLFELCVTFIQSYVFSILTSLY 214
Cdd:COG0356   184 TAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-217 1.90e-65

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 201.55  E-value: 1.90e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTiYNFQINWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSpTFLFISLFMF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGS-TLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  81 ILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSI 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070674818 161 RLSANMIAGHLLMTLLNNN------KLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTgpslssMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-216 2.87e-35

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 122.12  E-value: 2.87e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  73 LFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIF 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 153 IRPFSLSIRLSANMIAGHLLMTLLNN------NKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSS 216
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGlvpsllSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-217 6.74e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 123.69  E-value: 6.74e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTIYNFQIN----WISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKlKKIKSPTFLFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  77 LFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPF 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 157 SLSIRLSANMIAGHLLMTL---------LNNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLigiyaasalFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-217 1.98e-34

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 122.31  E-value: 1.98e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   5 LFNIFDPSTTIYNFQINWISSMIIITLM-----PNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFiSLFM 79
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIflissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  80 FILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLS 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070674818 160 IRLSANMIAGHLLMTLLNN-------NKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGllfslmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-217 3.48e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 119.20  E-value: 3.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDP--STTIYNFQINWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFiSLF 78
Cdd:MTH00173    1 MMVDLFSSFDDhnSSFSSLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLS-SLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  79 MFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070674818 159 SIRLSANMIAGHLLMTLLNNNKL----------MIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSsslfsssvvsLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-217 8.23e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 118.21  E-value: 8.23e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDP-STTIYNFQI-NWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNnEMKMLFKLKKIKSPTFLFISLF 78
Cdd:MTH00176    1 MLVDLFSSFDPpNKNIFSMISlSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLP-EMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  79 MFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070674818 159 SIRLSANMIAGHLLMTLLNNNK---------LMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMwgllpvsplIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-217 2.49e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 111.58  E-value: 2.49e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDpSTTIYNFQINWISSMIIITLMPNL--MWIIPNRIKWMMNKMLNFLNNEMKMLFKlkKIKSPTFLFISLF 78
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLtnRWLNNRLSTLQSWFFGSFTFQLMQPINK--KGHKWAVLFLSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  79 MFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSL 158
Cdd:MTH00179   78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070674818 159 SIRLSANMIAGHLLMTLLNN---------NKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00179  158 GVRLTANITAGHLLMHLISSavfvlmnfmGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 1-217 2.35e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 108.91  E-value: 2.35e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPsTTIYNFQINWISSMIIIT---LMPNLMWIiPNRIKWMMNkmlNFLNNEMKMLFKLKKIKSPTF--LFI 75
Cdd:MTH00035    3 INNSIFGQFSP-DTILFIPLTLLSSVIALSwlfFINPTNWL-PSRSQSIWL---TFRQEILKLIFQNTNPNTAPWagLLT 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  76 SLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRP 155
Cdd:MTH00035   78 TVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQP 157

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 156 FSLSIRLSANMIAGHLLMTLL--------NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00035  158 IALGLRLAANLTAGHLLIFLLstaiwelsNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-217 1.32e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 106.83  E-value: 1.32e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTIYnfqinwISSMIIITLMPNLMWIIPNRiKWMMNKM----LNFLNNEMKMLFKL--KKIKSPTFLF 74
Cdd:MTH00120    1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKN-RLLTNRLttlqLWLIKLITKQLMLPlnKKGHKWALIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  75 ISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIR 154
Cdd:MTH00120   74 TSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIR 153

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070674818 155 PFSLSIRLSANMIAGHLLMTLL---------NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00120  154 PLALGVRLTANLTAGHLLIQLIstatlnllpTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-214 1.04e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 104.65  E-value: 1.04e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTtiynfqINWISSMIIITLMPNLMW-----IIPNRIKWMMNKMLNFLNNEMkMLFKLKKIKSPTFLFI 75
Cdd:MTH00101    1 MNENLFASFITPT------ILGLPIVTLIIMFPSLLFptpnrLINNRLISIQQWLIQLTSKQM-MTIHNTKGQTWSLMLM 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  76 SLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRP 155
Cdd:MTH00101   74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQP 153

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070674818 156 FSLSIRLSANMIAGHLLMTLLNNNKLMI---------IILLIQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:MTH00101  154 MALAVRLTANITAGHLLIHLIGGATLALmsistttalITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
22-216 1.17e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.40  E-value: 1.17e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  22 WISSMIIITLMPNLMW----IIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFISLFMFILFNNFISLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  95 SSSSHMTFSMSLAIPFWMFFIMMSTFKN-TKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2070674818 174 TLL---------NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLYSS 216
Cdd:pfam00119 165 LLLaglifallsAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-217 6.22e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 94.94  E-value: 6.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  73 LFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIF 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2070674818 153 IRPFSLSIRLSANMIAGHLLMTLLNNNKLMI--------IILLIQMFMM-LFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlplmptvaILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-217 1.02e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 94.26  E-value: 1.02e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818   1 MTTNLFNIFDPSTTIYnfqinwISSMIIITLMPNLMWIIPNRiKWMMNKMLN----FLNNEMKMLFKLKKIKSP--TFLF 74
Cdd:MTH00073    1 MNLSFFDQFLSPTLLG------IPLIMLAMLLPWLLFPTPTN-KWLNNRLSTlqiwFLQNFTKQLMLPLNTPGHkwALIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  75 ISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIR 154
Cdd:MTH00073   74 TSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIR 153

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2070674818 155 PFSLSIRLSANMIAGHLLMTLLNNNKLM---------IIILLIQMFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00073  154 PLALGVRLTANLTAGHLLIQLISTATLVllplmptvsILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-214 4.85e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.36  E-value: 4.85e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  38 IIPNRIKWMMNKMLNFLNNEMKMLFKlKKIKSPTFLFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMM 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIG-KKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 118 STFKN-TKNMIAHLIpLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANMIAGHLLMTLL----NNNKLMIIILLIQMFM 192
Cdd:COG0356   105 GIKKKgLGGYLKHLF-FPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLaglaPFLLLGVLSLLLPVAW 183

                         170       180
                  ....*....|....*....|..
gi 2070674818 193 MLFELCVTFIQSYVFSILTSLY 214
Cdd:COG0356   184 TAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-214 1.11e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 83.55  E-value: 1.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  15 IYNFQINWISSMIIITLMPNLMWIIPNRIKWMMNKMLNFLNNEMKMLFKLKKIKSPTFLfISLFMFILFNNFISLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  95 SSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANMIAGHLLMT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2070674818 175 LL---------NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:MTH00172  176 ILagfgfnmlcASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 10-214 1.95e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 83.13  E-value: 1.95e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  10 DPSTTIYNFQINWISSMIIITLMPNLMWIIPNRikWMMNKMLNFLNNEMKMLFKLKKIKSPTFLFI-SLFMFILFNNFIS 88
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNR--WQSIMELIYLNIRSVVHDNLGKSGQKYFPFIlSLFLFIAILNILG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  89 LFPYIFSSSSH--MTFSMSLAIPFWMFFIMMSTFKntKNMIAHLIPLNTPIYLAPFMTVIETMSIFIRPFSLSIRLSANM 166
Cdd:MTH00175  101 LFPYVFTPTAHiiITFGLSLSIIIAVTLLGFLTFK--WNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANI 178

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2070674818 167 IAGHLLMTLLNN-------NKLMI---IILLIQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:MTH00175  179 SAGHLLFAILSGfafnmlsNGLIIlslFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-214 2.31e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 74.45  E-value: 2.31e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  73 LFISLFMFILFNNFISLFP-YIFSSSSHMTFSMSLAIpfwMFFIMMSTFKNTKNMIAHLIPLNTPiYLAPFMTVIETMSI 151
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALAL---IVFVLVIYYGIKKKGLGGYLKEFYL-QPHPLLLPIEIISE 150

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070674818 152 FIRPFSLSIRLSANMIAGHLLMTLL-----NNNKLMIIILLIQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:PRK05815  151 FSRPISLSLRLFGNMLAGELILALIallggAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-214 2.41e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 73.24  E-value: 2.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  75 ISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIpFWMFFIMMSTFK--NTKNMIAHLIPlNTPIYLAPFMTVIETMSIF 152
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV-FTFFITQYAAIKahGIKGYLAHLTG-GTHWSLWIIMIPIEFIGLF 252

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2070674818 153 IRPFSLSIRLSANMIAGHLLMTLLnnnkLMIIILL------------IQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:PRK13419  253 TKPFALTVRLFANMTAGHIVILSL----IFISFILksyivavavsvpFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 75-214 7.79e-13

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 65.35  E-value: 7.79e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  75 ISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIR 154
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 155 PFSLSIRLSANMIAGHLLMTLLNNNKLMII----------ILLIQMFMMLFELCVTFIQSYVFSILTSLY 214
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIASFAWKMIntgiligsfvPFAILIFVTILEMAVAIIQAYVFTLLTIVY 244
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 72-217 1.88e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.98  E-value: 1.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  72 FLFISLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKnmIAHLIPLNTPIYLAPF-MTVIETMS 150
Cdd:MTH00087   53 VISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEIVS 130

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2070674818 151 IFIRPFSLSIRLSANMIAGHLLMTLLNNNKLMIIILLIqmFMMLFELCVTFIQSYVFSILTSLYSSE 217
Cdd:MTH00087  131 ELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSI--LAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 76-161 1.73e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 43.72  E-value: 1.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  76 SLFMFILFNNFISL-FPYIFSSSSHMTFSMSLAIPFWMFFIMMSTFKNTKNMIAHLIPLNTPIYLAPFMTVIETMSIFIR 154
Cdd:MTH00050   27 SVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIR 106


                  ....*..
gi 2070674818 155 PFSLSIR 161
Cdd:MTH00050  107 PVVLILR 113
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 127-214 5.67e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 42.96  E-value: 5.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818 127 IAHLIPLNTPIYLAPFMTVIE-TMSIFIRPFSLSIRLSANMIAGHLLMTLLNNNKLM-------IIILLIQMFMMLFELC 198
Cdd:PRK13417  249 IWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQfqswgivPVSVIGSGLIYVLEIF 328

                          90
                  ....*....|....*.
gi 2070674818 199 VTFIQSYVFSILTSLY 214
Cdd:PRK13417  329 VAFLQAYIFVLLTSLF 344
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 76-210 2.00e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 38.14  E-value: 2.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070674818  76 SLFMFILFNNFISLFPYIFSSSSHMTFSMSLAIPFWMFFIMMSTfkNTKNMIAHLIPLNTPIYLAPFMTVIETMSifiRP 155
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGV--RARGVRGYLATFAEPTWVMIPLNLVEQLT---RT 157

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2070674818 156 FSLSIRLSANMIAGHLLMTLLnnnkLMIIILLIQMFMMLFELCVTFIQSYVFSIL 210
Cdd:PRK13421  158 FSLIVRLFGNVMSGVFVIGIV----LSLAGLLVPIPLMALDLLTGAVQAYIFAVL 208
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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