|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 711.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 81 QNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 161 LVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 241 YGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIAT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 401 LLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELISGT 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 578.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 81 QNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 161 LVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 241 YGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIAT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2070976247 401 LLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELISG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 574.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 81 QNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 161 LVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 241 YGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIAT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 401 LLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELISGT 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
4.01e-169 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 483.69 E-value: 4.01e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLT-PSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 80 SQNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 160 LLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 240 GYGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 320 GLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 400 TLLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.40e-152 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 440.53 E-value: 2.40e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 3 KIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSY-YPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 82 NHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 162 VSFLHLHSEMGTLHLPILKLthpNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 242 GIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 322 TSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2070976247 402 LTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.55e-144 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 420.92 E-value: 1.55e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPL-KNLTPWTGTDQISTPLLVLSCWFLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 80 SQNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 160 LLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 240 GYGIMRTTLLMQ-PLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 319 HGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGI 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 399 ATLLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELIS 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
4.28e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 350.22 E-value: 4.28e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPttlLSPTKFMWTNTTMYSLLISLISLhWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSWWLVQSLLFLLSFLFM-LLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 81 QNHLQHEPHARKQMFISTLIIIqpFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 161 LVSFLHLHSEMGTLHLPILKLThpnpstSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 241 YGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIAT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2070976247 401 LLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
7.33e-106 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 321.69 E-value: 7.33e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSpTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 81 QNHLQHEPHARkqMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 161 LVSFLHLHSEMGTLHLPILKLTHPnpsTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPP---SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 241 YGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIAT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2070976247 401 LLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-456 |
8.76e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 320.25 E-value: 8.76e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 55 WTGTDQISTPLLVLSCWFLPLMIMASQNHLQHEphARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQKSVKLR--NKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 135 RWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALlmaFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLA---FLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 295 GLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 375 LMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
..
gi 2070976247 455 SG 456
Cdd:MTH00150 414 FM 415
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-454 |
1.60e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 302.67 E-value: 1.60e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 8 MTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMASQNHLqhE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 88 PHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 168 HSEMGTLHLPILkltHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTT 247
Cdd:MTH00205 163 NSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 248 LLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 328 CLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYT 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2070976247 408 LYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELI 454
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-397 |
5.57e-76 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 239.52 E-value: 5.57e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 113 TELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTT 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 193 LLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTLALWGALMT 272
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 273 SSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLA-NTNYERTHSRILTLTRGLQPL 351
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2070976247 352 LPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTG 397
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-454 |
4.40e-68 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 224.96 E-value: 4.40e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQHEPHArkqmFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKKRPKL----YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNqPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMaFMVKAPLYGLHLWL 216
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIA-FAVKVPMFPFHTWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPL-YNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG1008 233 PDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 296 LVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNL 375
Cdd:COG1008 313 FVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070976247 376 MAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLMMLHIAPMLALILKPELI 454
Cdd:COG1008 393 VGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-449 |
1.17e-61 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 207.87 E-value: 1.17e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQHephaRKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNqPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMG-TLHLPILKlthPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLW 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQP-LYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 295 GLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTN 374
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2070976247 375 LMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLP-THITTTPNSNTREhllmMLHIAPMLALIL 449
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGRE----IAVLAPLVVLIL 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-449 |
1.39e-61 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 208.13 E-value: 1.39e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQHEPHArkqmFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKKRVKF----YMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GnQPERLSAGIYLLFYTLISSLPLLVSFLHL----HSEMGTLHLPILkltHPNPSTSWTTLLSSLALLMAFMVKAPLYGL 212
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADL---LNLPLPPGVQYWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIiTLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 292 SHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPP 371
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070976247 372 TTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTPNSNTREHLLmmlhIAPMLALIL 449
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLI----LLPLVALLL 464
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
15-449 |
1.54e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 189.12 E-value: 1.54e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 15 TLLSPTKFMWTNTTMYSLLISLISLHWLTPSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMASQNHLQHephaRKQM 94
Cdd:MTH00204 38 AILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 95 FISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTL 174
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 175 HLPILKLTHPNPSTS-WTTLLSSLAllmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPL 253
Cdd:MTH00204 194 DYQILLNIKLPLSIQkWLLVGFFLS----LAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPA 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 254 YNLLHYPFLTL-----ALWGALMTSsiclRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFC 328
Cdd:MTH00204 270 ASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFI 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 329 LANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTL 408
Cdd:MTH00204 346 AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSL 425
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2070976247 409 YMLLSTQRGTLPTHITTTPNSNTREhllmMLHIAPMLALIL 449
Cdd:MTH00204 426 YLYNRISFGGGSNYLLFSRDLNRRE----LLAILPLIIAIF 462
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
5.16e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 174.47 E-value: 5.16e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQHephaRKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALlmaFMVKAPLYGLHLWL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLS---LAIKIPKIPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPF-LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:MTH00217 230 PQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 296 LVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNL 375
Cdd:MTH00217 310 LVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
330 340 350
....*....|....*....|....*....|....*
gi 2070976247 376 MAELTIIIALFNWSSPTIFLTGIATLLTASYTLYM 410
Cdd:MTH00217 390 VGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-433 |
8.73e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 174.34 E-value: 8.73e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 59 DQISTPLLVLSCWFLPLMIMASQNHLQHephaRKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 139 QPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTL-HLPILKLTH--PNPSTSWTTLLSSLALLmafmVKAPLYGLHLW 215
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHvvSEQTQKWIFLGIFLAMA----VKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPL-YNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 295 GLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2070976247 375 LMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTPNSNTRE 433
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-413 |
6.08e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 161.61 E-value: 6.08e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 94 MFISTLIIIqpFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHlhsemgt 173
Cdd:MTH00094 65 LILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 174 lHLPILKLTHPNPSTSWTTLLSSLALlmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPL 253
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSWEMFFILSLS---FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 254 YNllhYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTN 333
Cdd:MTH00094 212 YN---NFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 334 YERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLS 413
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVS 368
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-457 |
3.13e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 156.35 E-value: 3.13e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNhLQHEPharkQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQpERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSwTTLLSSLALLMAFMVKAPLYGLHLWL 216
Cdd:PRK12561 131 GGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLA-LELLLYAGFLIAFGVKLPIFPLHTWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTL-----ALWGALMTssicLRQTDLKSLIAYSSV 291
Cdd:PRK12561 209 PDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAIlgvvnIIYGALNA----FAQDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 292 SHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPP 371
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPG 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 372 TTNLMAELTIIIALFN---WSSP----TIFLTGIATLLTASYTLYML----LSTQRGTLPTHItTTPNSNTREHLLMMLH 440
Cdd:PRK12561 365 MSGFVSELTVFLGITSsdvYSSTfrtiTILLAAVGLILTPIYLLSMLrrvfYGPRSELLPALA-VVEDAKPRELFIALSL 443
|
410
....*....|....*..
gi 2070976247 441 IAPMLALILKPELISGT 457
Cdd:PRK12561 444 LVPIIGIGFYPKLATQL 460
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
106-402 |
8.68e-35 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 134.50 E-value: 8.68e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 106 IILAFSTTELMLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPN 185
Cdd:COG0651 120 MNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAE 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 186 PSTSWTTLLSSLALLMaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLM--QPLYNLLHYPFLT 263
Cdd:COG0651 199 LDPGLLLAAFALLLVG-FGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 264 LALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILT 343
Cdd:COG0651 278 LGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLD 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070976247 344 LTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFN----WSSPTIFLTGIATLL 402
Cdd:COG0651 358 KLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-427 |
9.43e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 132.52 E-value: 9.43e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQhephaRKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQpERLSAGIYLLFYTLISSLPLLVSFLHLH--SEMGTLHLPILkLTHPNPSTSwtTLLSSLALLMAFMVKAPLYGLHL 214
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVwlSGASSFDYEPL-RSHTLPLST--QLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 294 MGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGL---QPLLPLMSLWWLLANLTNMALP 370
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIP 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 371 PTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTP 427
Cdd:PRK06473 387 GMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLP 443
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-411 |
2.53e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 125.97 E-value: 2.53e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 45 SYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMASQnhlqhePHARK-QMFISTLIIIQPFIILAFSTTELMLFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 124 ATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSWTTLLSSLALLMaF 203
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIA-Y 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 204 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFL-TLALWGALMTSSICLRQTDL 282
Cdd:PRK02546 224 GVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 283 KSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLA 362
Cdd:PRK02546 304 KRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTAC 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2070976247 363 NLTNMALPPTTNLMAELTIIIALFN---WSSP----TIFLTGIATLLTASYTLYML 411
Cdd:PRK02546 384 SLASLALPGMSGFVAELMVFVGFATsdaYTLPfrvvVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-427 |
1.88e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 120.20 E-value: 1.88e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 57 GTDQISTPLLVLSCWFLPLMIMASQNHLQhephaRKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQpERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPSTSwTTLLSSLALLMAFMVKAPLYGLHLWL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPflTLALWGA---LMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 294 MGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGL-QPL--LPLMSLWWLLANLTNMALP 370
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIP 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 371 PTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQRGTLPTHITTTP 427
Cdd:PRK07363 387 GLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYP 443
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
1.97e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.49 E-value: 1.97e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 110 FSTTELMLFYISFEATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVSFLHL---HSEMGTLHLPIL-KLTHPN 185
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLaNQSYPV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 186 PstswTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFltLA 265
Cdd:CHL00011 208 A----LEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW--LV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 266 LWGALM---TSSICLRQTDLKSLIAYSSVSHMGLV-IAAGMIqTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRI 341
Cdd:CHL00011 282 IVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIiIGIGSI-TDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 342 LTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTI---IIALFNWSSPT----IFLTGIATLLTASYTLYML 411
Cdd:CHL00011 361 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPkiliTFVMAIGMILTPIYLLSML 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.85e-23 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 94.51 E-value: 1.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 1 MLKIILPMTMLLPTTLLSPTKFMWTNTTMYSLLISLISLHWLT-PSYYPLKNLTPWTGTDQISTPLLVLSCWFLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2070976247 80 SQNHLQHEPHARKQMFISTLIIIQPFIILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
4.70e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 89.65 E-value: 4.70e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 59 DQISTPLLVLSCWFLPLMIMASQNHLQHEphARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 139 QPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKL----------THPNPSTSWTTLLSSLALLMAFMVKAP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 209 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR-------TTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRflytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 282 LKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2070976247 362 ANLTNMALPPTTNLMAELTIIIALFNWSsptIFLTGIATLLTASYTL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-406 |
1.51e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 81.85 E-value: 1.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 109 AFSTTELMLFYISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPST 188
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 189 swtTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTLALWG 268
Cdd:PRK08375 201 ---VVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 269 ALMT----SSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTL 344
Cdd:PRK08375 278 ALLSmlvgSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSE 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2070976247 345 TRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFN-WSSPTIFLTGIATLLTASY 406
Cdd:PRK08375 358 LSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-406 |
8.05e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 76.14 E-value: 8.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 89 HARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLH 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 169 SEMGTLHLPILKLTHPNPSTswttllsslALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTL 248
Cdd:PRK07234 169 QANGTFAFSGLATADPEAFA---------LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 249 LMQPLYNLLHYpfltLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIqtqwsfsgAMILMISHGLTSSLLFC 328
Cdd:PRK07234 240 DVPGLDLIVRI----FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFL 307
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2070976247 329 LANTNYERTHSRILTLTRGLQPLLPLmslwwLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFltgIATLLTASY 406
Cdd:PRK07234 308 CAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALN---LAAVGTAAS 377
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-449 |
6.01e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.81 E-value: 6.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLM--QPLYNLLHYPFLTLALWGALMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 284 SLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLAN 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 364 LTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLYMLLSTQrgtlpthITTTPNSNTREHLLMMLHIAP 443
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGM-------VFGEPPEAVNRGDLGWLTTSP 459
|
....*.
gi 2070976247 444 MLALIL 449
Cdd:PRK06458 460 MFVHLV 465
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
95-386 |
5.50e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 70.92 E-value: 5.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 95 FISTLIIIQPFIILAFSTTELMLFYisfEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTL 174
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 175 HLPILKLTHPNPSTSWTTLLSSlallmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRttLLMQPLY 254
Cdd:PRK08667 193 ELSPLGASAGILSLVFLLLFLG------FGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 255 NLLHYPFLTLAL--WGALMTSSICLRQTDLKSLIAYSSVSHMGLV---IAAGMIQTQW--------SFSGAMILMISHGL 321
Cdd:PRK08667 265 PELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgIGLYVIFGVYgldtlallALGGALFHSLNHAL 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070976247 322 TSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALF 386
Cdd:PRK08667 345 FKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-395 |
4.93e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 67.26 E-value: 4.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 105 FIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHlpilkLTHP 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 185 NPSTSwTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTL 264
Cdd:MTH00062 158 GSDDS-VSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 265 ALWGALMTSSICLrqtDLKSLIAYSSVSHMglVIAAGMIQTQWSFSGAMILMIS--HGLTSSLLFCLANTNYERTHSRIL 342
Cdd:MTH00062 237 FSVFFLITACSEL---DGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNW 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2070976247 343 TLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFL 395
Cdd:MTH00062 312 VLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-409 |
7.51e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 67.30 E-value: 7.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 59 DQISTPLLVLSC--WFLPLMIMASQNHLQHEPHARKQMFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRw 136
Cdd:PRK12665 75 DRLSALMLVVSSvvLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPIL--KLTHPNPSTSwttLLSSLALLMAFMVKAPLYGLHL 214
Cdd:PRK12665 154 GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavRLDELPSGTR---TALFAVLLVAFGIKAAVFPLSF 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPlynllHYPFLTLALWGALMTSSI----CLRQTDLKSLIAYSS 290
Cdd:PRK12665 231 WLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTL 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 291 VSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALP 370
Cdd:PRK12665 306 VSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIP 385
|
330 340 350
....*....|....*....|....*....|....*....
gi 2070976247 371 PTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLY 409
Cdd:PRK12665 386 PFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
116-448 |
8.27e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 64.39 E-value: 8.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 116 MLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLP-ILKLTHPNPSTSWTTLL 194
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 195 SSLALLMAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRTTLLMQpLYNLLHYPFLTLALWGALMTS 273
Cdd:PRK12646 213 IFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 274 SICLRQTDLKSLIAYSSVSHMGLVIA----AGMI--QTQWSFS--------GAMILMISHGLTSSLLFCLANTNYERTHS 339
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAmvgiGGGYaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAGT 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 340 RILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFN----------WSSPTIFLTGIATLLTASYTLY 409
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsliSMIIIVFIGVIASIFTFTYALY 449
|
330 340 350
....*....|....*....|....*....|....*....
gi 2070976247 410 MLLSTQRGtlPTHITTTPNSNTREHLLMMLHIAPMLALI 448
Cdd:PRK12646 450 MVKEVFWG--KYDSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-405 |
1.50e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.25 E-value: 1.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLY---NLLHYpFLTLALWGALMTSSICLRQ 279
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwsSVLKL-VIIMATLTVFFAELSALRQ 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 280 TDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWW 359
Cdd:PRK08377 295 KNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALAL 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2070976247 360 LLANLTNMALPPTTNLMAELTIIIALFNWSsptiFLTGIATLLTAS 405
Cdd:PRK08377 375 TIGALSTVGIPLFNVFWSKFRIILAGLSAG----YTWPVALVLGAS 416
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-412 |
2.71e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 62.27 E-value: 2.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 106 IILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFyTLISSLPLLVSFLHLHSEMGTLHLPIL--KLTH 183
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsvKIAE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 184 PNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRT-TLLMQPLYNLLHYPFL 262
Cdd:PRK07691 200 LSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLIL 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 263 TLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRIL 342
Cdd:PRK07691 280 ILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDL 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 343 TLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFnwsSPTIFLTGIATLLTASYTLYMLL 412
Cdd:PRK07691 360 KKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF---EAGFYVSGIIVLLSSLLVLYSVI 426
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
250-427 |
6.31e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.32 E-value: 6.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 250 MQPLYNLLHYPFLTLALWG---ALMTSSICLRQTDLKSLIAYSSVSHMGL-VIAAGMIQtqwsFSGAMILMISHGLTSSL 325
Cdd:COG1009 264 LSPLFALSPVWLTVVAIIGaitALFAALIALAQTDIKRVLAYSTVSQLGYmFLALGVGA----YVAALFHLLTHAFFKAL 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 326 LFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATL---L 402
Cdd:COG1009 340 LFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafL 419
|
170 180
....*....|....*....|....*....
gi 2070976247 403 TASYTLYMLLST----QRGTLPTHITTTP 427
Cdd:COG1009 420 TAFYSFRLFFLVffgkPRPKTPKHPHESP 448
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-447 |
7.44e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.99 E-value: 7.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 87 EPHARKQMFISTLIIIQPFIILafsTTELMLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPL-LVSFL 165
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIAL---SSDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVI 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 166 HLHSEMGTLHLPILKLTHPNPStswttlLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR 245
Cdd:PRK06589 189 LIYTKTGNLDFVSGGLFSKNQS------IILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYK 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 246 TTLLMQPLYNLLHY-----PFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHG 320
Cdd:PRK06589 263 ILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHS 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPT--IFLTGI 398
Cdd:PRK06589 343 FAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLV 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2070976247 399 ATLLTASYTLYMLLSTQRGTLPthiTTTPNSNTREHLLMMLHIAPMLAL 447
Cdd:PRK06589 423 VIASSILSALYLLKILSSIYKP---SLSENSFITKSLPYLMQISVITCC 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
9.36e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.09 E-value: 9.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRttllMQPLYNLLHYPFLTLALWGA---LMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLAR----LNPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 289 SSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 2070976247 369 LPPTTNLMAELTIIIALFNWSSPTIFLTGIATL 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
106-449 |
1.45e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 59.77 E-value: 1.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 106 IILAFSTTELMLFYISFEATLIPTLILITRWgNQPERLSAGiylLFYTLISSLPLLVSFLHL---------HSEMGTLHL 176
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAA---LKYIFIASTAMIFAFIGLiflfsltrqALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 177 PILKLTHPNPSTSwTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLM------ 250
Cdd:PRK08676 191 TELAAHASLLSPS-VLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqsgaa 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 251 -QPLYNLLHYPFLTLALWGALMtssicLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCL 329
Cdd:PRK08676 270 eQFSNVLIGLGIFSIAVAAFSM-----LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFS 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 330 ANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLLTASYTLY 409
Cdd:PRK08676 345 AGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAI 424
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2070976247 410 MLLSTQRGTLPthiTTTPNSNTREHLLMMLHIAPMLALIL 449
Cdd:PRK08676 425 FLLKAFTRVSE---GNADRPVFRTPLSMKLPIVIILALVL 461
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-371 |
1.28e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.21 E-value: 1.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTllmqplYNLLH-------YPFLTLALWGALMTSSI 275
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVV------FDLLGapgwwwgVLVLALGAISAVLGVLY 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 276 CLRQTDLKSLIAYSSVSHMGLV----------IAAGM-IQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTL 344
Cdd:PRK06521 294 ALAEHDLKRLLAYSTIENIGIIfvglglamvfIAYGMpLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEK 373
|
170 180
....*....|....*....|....*..
gi 2070976247 345 TRGLQPLLPLMSLWWLLANLTNMALPP 371
Cdd:PRK06521 374 LGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
114-372 |
1.41e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 57.36 E-value: 1.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 114 ELMLFYISFEATLIPTLILITRWGNQPErlSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLP-ILKlthpnpSTSWTT 192
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSgILH------SDVWAE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 193 LLSSLALLMAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQ--PLYNLLhypFLTLA 265
Cdd:PRK12650 203 KPGLTTVVAVLIAvaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHdvAVWNWL---LIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 266 LWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLT 345
Cdd:PRK12650 280 MITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260
....*....|....*....|....*..
gi 2070976247 346 RGLQPLLPLMSLWWLLANLTNMALPPT 372
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
2.12e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.54 E-value: 2.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 110 FSTTELMLFYISFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISSLPLLVSFLhLHSEMGTLHLP-ILKLTHPNPST 188
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAIGAYAMLYAIFL-IYAKTGTFDFAdISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 189 SWTTLLSSLALLMAFmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-------IMRTTLLMQ-PLY---NLL 257
Cdd:PRK08668 193 GFALIVFLFLLAFGV-AKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfllvlyvLPGTKLFSEfGTYrgvPLF 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 258 HYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLF 327
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
98-407 |
7.97e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 54.33 E-value: 7.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 98 TLIIIQPFIILAFSTT-ELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHL 176
Cdd:PRK08376 125 TLILLLELGMLGMAITgDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNM 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 177 PIL-KLTHPNPSTswTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRTTL-LMQPLY 254
Cdd:PRK08376 205 AYLaVKMSENPTV--VAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFsIYGPAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 255 NLLHYPFLTLALWGALMT--SSICLRQTDLKSLIAYSSVSH---------MGLVIAAGMIQTQWSF---SGAMILMISHG 320
Cdd:PRK08376 282 NLATVGWVIIILGCLTMFvgVAMAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEialAGGIYHIVNHA 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 321 LTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTII--IALFNWSSPTIFLTGI 398
Cdd:PRK08376 362 LYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFNPILGVIAMIGS 441
|
....*....
gi 2070976247 399 AtLLTASYT 407
Cdd:PRK08376 442 V-LTLASFV 449
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-411 |
1.06e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 54.18 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 95 FISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLPLL-VSFLHLHSemG 172
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYGFT--G 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 173 TLHL-PILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQ 251
Cdd:TIGR01770 182 SLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 252 -PLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTS----SLL 326
Cdd:TIGR01770 262 fGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 327 FCLANTNYERTHSriLTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNwsSPTIFLTGIATLLTASY 406
Cdd:TIGR01770 342 SLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK--SGLYWLAVIAVLTSVIG 417
|
....*
gi 2070976247 407 TLYML 411
Cdd:TIGR01770 418 AFYYL 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-405 |
2.76e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.81 E-value: 2.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRT--TLLMQPLYnLLHYPF----LTLALWGALMTSSICLR 278
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvyDVFKANFV-FTTLPFnnvfMILAALAIVFGSVLAIL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 279 QTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANT---NYERTHSRILTltrGLQPLLPLM 355
Cdd:PRK12662 300 SKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKI 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2070976247 356 SLWWLLANLTNMALPPTTNLMAELTIIIALFNwsspTIFLTGIATLLTAS 405
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK----SNAWIGLVVLLVGS 422
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-402 |
5.99e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 51.51 E-value: 5.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 108 LAFSTTELMLFyISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPILKLTHPNPS 187
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLK 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 188 TswttlLSSLALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRTTLLMQPLYNLLHYP 260
Cdd:PRK06525 207 Y-----LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 261 FLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG---LVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERT 337
Cdd:PRK06525 275 GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGymfFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSC 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2070976247 338 HSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLTGIATLL 402
Cdd:PRK06525 355 GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
5.69e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.80 E-value: 5.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 59 DQISTPLLVLSCWFLPLMIMASQNHLQHEPHARKqmFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 139 QPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHL----------PILKLTHPNPSTSWTTLLSSLALLMAFMV--- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgsGIMDRGYYGGGAYESPLAPFAIIGILLLIgci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRTTLlmqPLYNLLHYPFLTLALWGAL---MTSSICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF---PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 282 LKSLIAYSSVSHMGLVIAagMIQTQWSFSGAMILMISHGLTSSLLFCLA-----NTNYERTHSRILTltrGLQPLLPLMS 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVL--IIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKMG---GLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 2070976247 357 LWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-396 |
1.00e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.90 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 292 SHMGLV---IAAGMIQTQWS--------FSGAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWL 360
Cdd:PRK08042 279 ENIGIIllgLGAGVTGIALEqpalialgLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190
....*....|....*....|....*....|....*.
gi 2070976247 361 LANLTNMALPPTTNLMAELTIIIALFNWSSPTIFLT 396
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVA 394
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-402 |
4.01e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.71 E-value: 4.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 104 PFIIL-------AFSTTELMLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHL 176
Cdd:PRK12663 112 PFILLlmagvigSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 177 PILKLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRTTLLMQPLYNL 256
Cdd:PRK12663 191 AHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 257 LHYPFLTLALWGALMTSSI-CLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYE 335
Cdd:PRK12663 270 LLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2070976247 336 RTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFN----WSSPTIFLTGIATLL 402
Cdd:PRK12663 350 LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDngayILLALMLITSLITMY 420
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
252-411 |
5.04e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.41 E-value: 5.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 252 PLYNLLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLAN 331
Cdd:PRK06277 260 SYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAG 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 332 TNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNWSSPTI----FLTGIATLLTASYT 407
Cdd:PRK06277 340 IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELaiimIIVSIGTFVSMMKA 419
|
....
gi 2070976247 408 LYML 411
Cdd:PRK06277 420 FYLI 423
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
80-440 |
7.06e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.07 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 80 SQNHLQHEPHARKqmFISTLIIIQPFIILAFSTTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00020 100 STAYMRGDPHIPR--FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIG 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 160 LLVSFLHLHSEMGTLHL-PILKLTHPNPSTSwtTLLSSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKL 238
Cdd:MTH00020 178 LLLAMFLLWDRFGSLDFsSVFNMVVSAPSSD--ITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVT 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 239 GG-YGIMRttllMQPLYNLLHYPFLTLALWGAL---MTSSICLRQTDLKSLIAYSSVSHMG-LVIAAGMIQtqwsFSGAM 313
Cdd:MTH00020 255 AGvFLLIR----SSPLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGyMVVACGLSH----YSISL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 314 ILMISHGLTSSLLFCLANtnyerthSRILTLTR--------GLQPLLPLMSLWWLLANLTNMALPPTTNLMA-ELTIIIA 384
Cdd:MTH00020 327 FHLMNHAFFKALLFLSAG-------SVIHALSDeqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELA 399
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2070976247 385 LF-NWSSPTIFLTGIATLLTASYTLYMLlstqrgtlptHITTTPNSNTREHLLMMLH 440
Cdd:MTH00020 400 FGqYYLIFAYWLGCFSALLTAFYSIRLI----------YLTFLSNTNLKKAVFFHLH 446
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
212-371 |
7.28e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 45.29 E-value: 7.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 212 LHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRttllMQPLYNLLHYPFLTLALWG---ALMTSSICLRQTDLKSLIAY 288
Cdd:PRK07390 240 LHLWLDEA-MEGPNPASILRNSVVVATGAWVLIK----LQPVLALSPVALTVLIVIGtvtAIGASLVAIAQIDIKRALSY 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 289 SSVSHMGLV-IAAGMIQTQWsfsgAMILMISHGLTSSLLFCLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNM 367
Cdd:PRK07390 315 STSAYLGLVfIAVGLQQPDI----ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
....
gi 2070976247 368 ALPP 371
Cdd:PRK07390 391 ALLP 394
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
7.56e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 7.56e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2070976247 277 LRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
277-404 |
9.97e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 44.72 E-value: 9.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 277 LRQTDLKSLIAYSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLF-CLANTNYERTHSRILTLTRGL---QPLL 352
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLarrSPLL 367
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2070976247 353 PLMSLWWLLAnltnMA-LPPTTNLMAELTIIIALfnWSSPTIFLTGIATLLTA 404
Cdd:COG1007 368 ALAMTIFLLS----LAgIPPTAGFFGKFYVFSAA--VEAGLYWLAVIAVLNSV 414
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
204-417 |
1.10e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 44.63 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 204 MVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRttllMQPLYNLLHYPFLTLALWGAL---MTSSICLRQ 279
Cdd:PRK07376 238 MAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGvFLVAR----MYPVFEQFPAVMTVIAWTGAItafLGASIALTQ 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 280 TDLKSLIAYSSVSHMG-LVIAAGMiqtqWSFSGAMILMISHGLTSSLLFCLANT---------NYERTHSRILTLTRGLQ 349
Cdd:PRK07376 313 NDIKKGLAYSTISQLGyMVMAMGC----GAYSAGLFHLMTHAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLR 388
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2070976247 350 PLLPLMSLWWLLANLTNMALPPTTNLMAELTIIIALFNwSSPTIFLTGIATL-LTASYTLYMLLSTQRG 417
Cdd:PRK07376 389 KYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTAFYMFRMYFLTFEG 456
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
2.58e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.22 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 137 GNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPIL--KLTHPNPSTSWTTLLSSLALLMAFMVKAPLYGLHL 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLaqRIAQLPAADRALLEAGAALLLVVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 215 WLPKAHVEA--PIAGSMllaALLLKLGGYGIMR-TTLLMQPLYNLLHYPFLTLALWGALMTSSI----CLRQTDLKSLIA 287
Cdd:PRK12666 232 WLPPAYAAAsaPVAALF---AIMTKVGIYAILRlSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLAA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2070976247 288 YSSVSHMGLVIAAGMIQTQWSFSGAMILMISHGLTSSLLFCLA 330
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-371 |
7.33e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 7.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 99 LIIIQPFIILAFSTTELMLFyISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSFLHLHSEMGTLHLPI 178
Cdd:PRK12649 118 LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 179 LKLTHPNPSTSWTTLLSSLALLMAFM---VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRttllMQPLY 254
Cdd:PRK12649 197 ILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVAR----IHPIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2070976247 255 NLLHYPFLTLALWG---ALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAGMIQTQ----WSFSGAMILMISHGLTSSLLF 327
Cdd:PRK12649 272 SGTEAWFILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLF 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2070976247 328 CLANTNYERTHSRILTLTRGLQPLLPLMSLWWLLANLTNMALPP 371
Cdd:PRK12649 352 LVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| |
