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Conserved domains on  [gi|2090365040|gb|QZZ23845|]
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ATP synthase F0 subunit 6 (mitochondrion) [Afronurus sp. 'furcata']

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.43e-119

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.07  E-value: 1.43e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSiLNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTgHPGSTFLFISLFSMI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  81 LFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2090365040 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.43e-119

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.07  E-value: 1.43e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSiLNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTgHPGSTFLFISLFSMI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  81 LFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2090365040 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 1.92e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.24  E-value: 1.92e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   4 LFSVFDPSS-SILNLSLNWLSTFLGILLI----PSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPgSTFLFISLFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2090365040 159 VRLAANMIAGHLLMTLLGNTGPSL-SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 5.00e-47

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 152.55  E-value: 5.00e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  72 LFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNI 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 152 IRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 2.73e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.44  E-value: 2.73e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  21 WLSTFLGILLIPSAFW----LMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFISLFSMILFNNFLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  94 TSSSHLAFTLALALPLWLSFMLYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLM 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2090365040 173 TLLGNTGPSLSLTILSFLII---GQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 72-219 2.76e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 103.23  E-value: 2.76e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  72 LFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISN 150
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2090365040 151 IIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIigQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 1.43e-119

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.07  E-value: 1.43e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSiLNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTgHPGSTFLFISLFSMI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  81 LFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2090365040 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-223 6.67e-54

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 172.52  E-value: 6.67e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSIL--NLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVtSTLHKEFSTLLGPTGHPGSTFLFISLFS 78
Cdd:MTH00176    2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMF-STFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2090365040 159 VRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEV 223
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLlpvSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 1.92e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.24  E-value: 1.92e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   4 LFSVFDPSS-SILNLSLNWLSTFLGILLI----PSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPgSTFLFISLFS 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2090365040 159 VRLAANMIAGHLLMTLLGNTGPSL-SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 5.00e-47

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 152.55  E-value: 5.00e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  72 LFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNI 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 152 IRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 6.83e-44

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 146.80  E-value: 6.83e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSILNLSLN----WLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGpTGHPGSTFLFISL 76
Cdd:MTH00005    2 LTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  77 FSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGT 156
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2090365040 157 LAVRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 5.54e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 139.23  E-value: 5.54e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDPSSSILNL--SLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFiSLFS 78
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLS-SLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2090365040 159 VRLAANMIAGHLLMTLLGNTGPSL----SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSSlfssSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 2.86e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 137.39  E-value: 2.86e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDpSSSILNLSLNWLSTFLGILLIPS-AFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGStFLFISLFSM 79
Cdd:MTH00179    2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  80 ILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAV 159
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 160 RLAANMIAGHLLMTL-------LGNTGPSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00179  160 RLTANITAGHLLMHLissavfvLMNFMGMVALLTLLVLFL----LTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-222 9.46e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 136.11  E-value: 9.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFDpSSSILNLSLNWLSTFLGILLIPSA-FWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLfISLFSM 79
Cdd:MTH00120    2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSPkNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALIL-TSLMLL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  80 ILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAV 159
Cdd:MTH00120   80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 160 RLAANMIAGHLLMTL-------LGNTGPSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00120  160 RLTANLTAGHLLIQListatlnLLPTMPTLSLLTLIILLL----LTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-222 6.90e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 128.94  E-value: 6.90e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   2 TNLFSVFDPSSsILNLSLNWLSTFLGI---LLIPSAFWLmPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFiSLFS 78
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2090365040 159 VRLAANMIAGHLLMTLLGNT----GPSLSLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00035  162 LRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIF--FLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-219 4.52e-35

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 123.91  E-value: 4.52e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   3 NLFSVFDpSSSILNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLfISLFSMILF 82
Cdd:MTH00101    4 NLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLML-MSLILFIGS 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  83 NNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVRLA 162
Cdd:MTH00101   82 TNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLT 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2090365040 163 ANMIAGHLLMTLLGN-----TGPSLSLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00101  162 ANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 61-222 2.38e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 116.90  E-value: 2.38e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  61 LGPTGHPGSTfLFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMP 140
Cdd:MTH00132   62 LNVGGHKWAL-LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 141 FMVCIETISNIIRPGTLAVRLAANMIAGHLLMTLLGNTG-------PSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFA 213
Cdd:MTH00132  141 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAfvllplmPTVAILTATLLFL----LTLLEVAVAMIQAYVFV 216


                  ....*....
gi 2090365040 214 VLSTLYSSE 222
Cdd:MTH00132  217 LLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 2.73e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.44  E-value: 2.73e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  21 WLSTFLGILLIPSAFW----LMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFISLFSMILFNNFLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  94 TSSSHLAFTLALALPLWLSFMLYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLM 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2090365040 173 TLLGNTGPSLSLTILSFLII---GQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 4.80e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 116.22  E-value: 4.80e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040   1 MTNLFSVFdPSSSILNLSLNWLSTFLGILLIPSAF--WLmPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGStFLFISLFS 78
Cdd:MTH00073    2 NLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTPTnkWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLMV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLA 158
Cdd:MTH00073   79 FLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2090365040 159 VRLAANMIAGHLLMTLLGNTGPSL-----SLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00073  159 VRLTANLTAGHLLIQLISTATLVLlplmpTVSILTMIVL--FLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 72-219 2.76e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 103.23  E-value: 2.76e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  72 LFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISN 150
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2090365040 151 IIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIigQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 14-219 1.82e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 101.66  E-value: 1.82e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  14 ILNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLfISLFSMILFNNFLGLFPYIF 93
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  94 TSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLMT 173
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2090365040 174 LLGNTGPSLsLTILSFLIIGQIALLV----LESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00172  176 ILAGFGFNM-LCASGFLSLFPLLIMVfitlLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-219 4.76e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 98.54  E-value: 4.76e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  16 NLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFiSLFSMILFNNFLGLFPYIFTS 95
Cdd:MTH00175   30 NSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTP 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  96 SSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLMTLL 175
Cdd:MTH00175  109 TAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAIL 188

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2090365040 176 gnTGPSLSLTILSFLIIGQIALL------VLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00175  189 --SGFAFNMLSNGLIILSLFPMLimifitLLEMAVAVIQAYVFCLLTTIY 236
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 72-219 3.37e-21

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 87.93  E-value: 3.37e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  72 LFISLFSMILFNNFLGLFP-YIFTSSSHLAFTLALALPLWLSFMLYG-WINHTQHMFAHLVPQgtppvLMPFMVCIETIS 149
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 150 NIIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGqIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 74-219 2.59e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 80.75  E-value: 2.59e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  74 ISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIR 153
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 154 PGTLAVRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIG-QIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIASFAWKMintGILIGSFVPFAiLIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-219 9.15e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 66.30  E-value: 9.15e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  74 ISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWL-----SFMLYGWINHTQHMFAhlvpqGTPPVLMPFMVCIETI 148
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFitqyaAIKAHGIKGYLAHLTG-----GTHWSLWIIMIPIEFI 249

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 149 SNIIRPGTLAVRLAANMIAGHLLMtllgntgpsLSLTILSFLIIGQIALLV-----------LESAVAIIQSYVFAVLST 217
Cdd:PRK13419  250 GLFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVAVAvsvpfaifiylLELFVAFLQAYIFTMLSA 320


                  ..
gi 2090365040 218 LY 219
Cdd:PRK13419  321 LF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-219 1.16e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 57.21  E-value: 1.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  94 TSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETI-SNIIRPGTLAVRLAANMIAGH-LL 171
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2090365040 172 MTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 67-222 3.73e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.60  E-value: 3.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  67 PGSTFLFISLFSMILFNNFLGLFPYIFTSSSHLAFTLALALPLWLSFMLYGWINhtQHMFAHLVPQGTPPVLMPF-MVCI 145
Cdd:MTH00087   49 PLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFV 126

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2090365040 146 ETISNIIRPGTLAVRLAANMIAGHLLMTLLGNTGpslsltilSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00087  127 EIVSELSRPLALTLRLTVNLMVGHLISSLLNFLG--------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 11-219 6.99e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 53.98  E-value: 6.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  11 SSSILNLSLNWLSTFLGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLgpTGHPGSTFLFI-SLFSMILFNNFLGLF 89
Cdd:PRK13420   17 TESVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLI 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  90 PYIFTSSSHLAFTLALALPLWLSFMLYG-----WINHTQHmfaHLVPQgtpPVLMPFMVcietISNIIRPGTLAVRLAAN 164
Cdd:PRK13420   95 PGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGN 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2090365040 165 MIaghllmtllgntgpSLSLTILSFLIIG----QIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13420  165 IM--------------SLELAALLVLLVAgflvPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 79-177 8.78e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.49  E-value: 8.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  79 MILFNNFLGL-FPYIFTSSSHLAFTLALALPLWLSFMLYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNIIRPGTL 157
Cdd:MTH00050   31 FIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVL 110

                          90       100
                  ....*....|....*....|
gi 2090365040 158 AVRLAANMIAGHLLMTLLGN 177
Cdd:MTH00050  111 ILRPFINISLGCFGGVALGN 130
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 26-219 6.79e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 36.60  E-value: 6.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040  26 LGILLIPSAFWLMPSRYSLVWGKVTSTLHKEFSTLLGPTGHPGSTFLFiSLFSMILFNNFLGLFPYIFTSSSHLAFTLAL 105
Cdd:PRK13421   35 AGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIG-TLFLFVLVANWSSLVPGVEPPTAHLETDAAL 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2090365040 106 ALPLWLSFMLYGWinHTQHMFAHLVPQGTPPVLmpfMVCIETISNIIRPGTLAVRLAANMIAGHLLMtllgntGPSLSLT 185
Cdd:PRK13421  114 ALIVFLATIYYGV--RARGVRGYLATFAEPTWV---MIPLNLVEQLTRTFSLIVRLFGNVMSGVFVI------GIVLSLA 182

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2090365040 186 ILsfliIGQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13421  183 GL----LVPIPLMALDLLTGAVQAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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